retinoid x, maker-scaffold42_size484952-snap-gene-3.25 (gene) Tigriopus kingsejongensis

Overview


Name	retinoid x
Unique Name	maker-scaffold42_size484952-snap-gene-3.25
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of retinoid x vs. L. salmonis genes
Match: EMLSAG00000010267 (supercontig:LSalAtl2s:LSalAtl2s680:110406:112508:1 gene:EMLSAG00000010267 transcript:EMLSAT00000010267 description:"maker-LSalAtl2s680-augustus-gene-1.19")

HSP 1 Score: 138.658 bits (348), Expect = 6.462e-35
Identity = 129/439 (29.38%), Postives = 197/439 (44.87%), Query Frame = 0

Query:  486 DQFIHDIL--SEDVIDPCSGEDVQAWSTLSESTLSPKTEDESVSL-------RLCQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYM-CKASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEERRVKREHKRAKVLKAKDVKRDKVLPISRGLDFEFTTEEELK-VMQIRNYAKTCKLNHMALTMAKDGGPLTVLWDVIFNKQNVPLKFLETVENREKA-LFQGISMGLEEMT-EIDVEDRQTLVQENGSAFFALIMSLYSIPN-NFKKLMNDLTRTLEQMSRTNPNVRLTNVLDTLEVL--------KLSPGNHPTYETFYGNVSQSNKTLSEAHRALVTKIQHAVGSFENNPPDEMIVCLVILNLVF-------RSHGAKLHNKAKVERVQNNFAFMLYRYLKSRFAQKAGSKMAKALMLTTYTTE 895
            D  I++IL  S+      S  D + ++ L+ +TLS   ED S  +       RLCQ+CG  AGKH YYGGQ C SCRAFFRRSVQN SY  ++ C  +  C I+ K+R++C  CR++KC+ AGM   W+  D ERR K+         A  +  +K  P+    D E  T  E+  V  I N      L+++   + +D   L    D +         +L+   + EK  L   ISMG    +     ED   L Q N S    +   L SI N NF  + ++L  ++ ++   N N  + N+   +E           L P  +  Y TF                 LV++I   V   EN    +    +++L ++F       +  G K  +   ++R Q  +  ML RY + ++ +K+  K  K +ML +   E
Sbjct:   56 DLLINEILYLSQSSDSFLSNADQENFNELNSTTLS---EDSSQIIIGRQALPRLCQICGEVAGKHVYYGGQCCTSCRAFFRRSVQNNSYKQFICCSQTKDCIINLKTRKACQLCRFQKCVSAGMRVSWVFPDRERRSKKS--------AMTLNNNKP-PLPSFNDPEGLTSIEVSIVFTINNNLHKNFLDNLNTMVKRDSDFLIDFVDYLAFPTRSEYPYLKMAMSLEKIQLLSLISMGTSNSSLHFSQEDLYVLYQIN-SPKINIFRELSSIKNPNFPDI-DELINSV-RLLHLNNNETIQNLPSRVEFTLQHYLLNHDLCPNENDNYSTFLH---------------LVSQINSWVMDDENVIKQDKFSYIIMLFILFFDRTDSVKISGVKFKDPEMIDRAQLAYVQMLKRYFQRKYPRKSSKKFLKGIMLPSLIAE 464

HSP 2 Score: 97.0561 bits (240), Expect = 2.756e-21
Identity = 42/90 (46.67%), Postives = 60/90 (66.67%), Query Frame = 0

Query:  125 QTLPK-CPICSNSAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFK-CTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRKER 212
            Q LP+ C IC   AGKH YYG + C SCR FFRRSVQN  +  F  C+ + +C I+ K+ K+C+ CR+QKC+ AGM+ ++V    +R+ +
Sbjct:  101 QALPRLCQICGEVAGKHVYYGGQCCTSCRAFFRRSVQNNSYKQFICCSQTKDCIINLKTRKACQLCRFQKCVSAGMRVSWVFPDRERRSK 190

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BLAST of retinoid x vs. L. salmonis genes
Match: EMLSAG00000011907 (supercontig:LSalAtl2s:LSalAtl2s83:639505:641027:-1 gene:EMLSAG00000011907 transcript:EMLSAT00000011907 description:"maker-LSalAtl2s83-augustus-gene-6.22")

HSP 1 Score: 124.405 bits (311), Expect = 2.849e-30
Identity = 115/413 (27.85%), Postives = 185/413 (44.79%), Query Frame = 0

Query:  510 STLSESTLSPKTEDESVSLRLCQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTY-MCKASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEERRVKREHKRAKVLKAKDVKRDKVLPISRGLDFE--FTTEEELKVMQIRNYAKTCKLNHMALTMAKDGGPLTVLWDVIFNKQNVPLKFLETVENREKALFQG-ISMGLEEMTEIDVEDRQTL--VQENGSAFFALIMSLYSIPNNFKKLMNDLTRTLEQMSRTN-PNVRLTNVLDTLEVLKLSPGNHPTYETFYGNVSQSNKTLSEAHRA-------------LVTKIQHAVGSFENNPPDEMIVCLVILNLVFRSH-------GAKLHNKAKVERVQNNFAFMLYRYLKSRFAQKAGSKMAKALMLTTYTTE 895
            +TLSE +       E++  RLCQ+CG  AGKH YYGGQ C SCRAFFRRSVQN SY  +  C  +  C I+ ++R+SC  CR++KC+ AGM   W++ D ERR K   K A +L           P+    D     T+ E   V  I N  +    +++   + ++   L    D +         +L    + EK  F   ISMG           R +L   QE+       +  LY I  NF K+  +  R +  ++ TN P++    +++++ +L L   N+ T +     +  + +     H               LV++I   V + EN+   +    +++  ++F          G K  +   ++R Q  +  ML RY + R+ +K+  K  K +ML +   E
Sbjct:   86 ATLSEPSSQIIIRREALP-RLCQICGEVAGKHVYYGGQCCTSCRAFFRRSVQNNSYKQFSCCSKTEDCIINLQTRKSCQLCRFQKCISAGMRASWVLPDGERRSK---KSAMILNNNT-------PLLPSFDDPGGLTSLEVSFVFTINNKLRKSFFDNVNSMVIRNSDFLIDFVDYLAFPARSEYPYLRMAMSLEKIQFLSFISMG---------TSRSSLHFSQED-------LYILYDI--NFPKI--NTFREVSSITTTNCPDI--DELINSVHLLHL--KNNETLQNLPSRIEFTIQHYILNHHLYPNENDNHSRFLHLVSQINSWVMNDENHTKKDKFSYIIMFFILFFDRTDSVTLSGVKFRDPELIDRAQLIYVQMLKRYFQRRYPRKSSKKFLKGIMLPSLIAE 463

HSP 2 Score: 97.4413 bits (241), Expect = 2.417e-21
Identity = 45/104 (43.27%), Postives = 64/104 (61.54%), Query Frame = 0

Query:  111 PHDTIIVSAEFRPTQTLPK-CPICSNSAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFK-CTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRKER 212
            P   II+  E      LP+ C IC   AGKH YYG + C SCR FFRRSVQN  +  F  C+ + +C I+ ++ KSC+ CR+QKC+ AGM+ ++V    +R+ +
Sbjct:   91 PSSQIIIRRE-----ALPRLCQICGEVAGKHVYYGGQCCTSCRAFFRRSVQNNSYKQFSCCSKTEDCIINLQTRKSCQLCRFQKCISAGMRASWVLPDGERRSK 189

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BLAST of retinoid x vs. L. salmonis genes
Match: EMLSAG00000012651 (supercontig:LSalAtl2s:LSalAtl2s959:3535:5114:-1 gene:EMLSAG00000012651 transcript:EMLSAT00000012651 description:"maker-LSalAtl2s959-snap-gene-0.24")

HSP 1 Score: 98.5969 bits (244), Expect = 8.282e-22
Identity = 46/110 (41.82%), Postives = 66/110 (60.00%), Query Frame = 0

Query:  530 LCQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMCKASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEE---RRVKREHKRAKVLKAKDVKRDKVLPIS 636
            +C VCG  A  H +YGG  C SCRAFFRRSV   +  TY C    AC I   +R++C  CRY+KCLE+GM P W++S+EE   R + +  ++ K    K+V  +  + ++
Sbjct:   90 VCNVCGDKAPDHIHYGGIACFSCRAFFRRSVPKHT--TYFCSTDQACMITITTRKNCQFCRYKKCLESGMKPSWVLSEEEKSSRNLIKYVRKNKTTCGKNVNNNNTIEVN 197

HSP 2 Score: 95.1301 bits (235), Expect = 1.364e-20
Identity = 42/99 (42.42%), Postives = 60/99 (60.61%), Query Frame = 0

Query:  122 RPTQTLPKCPICSNSAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRKERILQRYGSK 220
            +P  T   C +C + A  H +YG   C SCR FFRRSV    H  + C+    C I   + K+C+FCRY+KCL++GMKP++V S+E++  R L +Y  K
Sbjct:   83 KPKMTEMVCNVCGDKAPDHIHYGGIACFSCRAFFRRSVPK--HTTYFCSTDQACMITITTRKNCQFCRYKKCLESGMKPSWVLSEEEKSSRNLIKYVRK 179

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BLAST of retinoid x vs. L. salmonis genes
Match: EMLSAG00000004174 (supercontig:LSalAtl2s:LSalAtl2s220:369739:371271:-1 gene:EMLSAG00000004174 transcript:EMLSAT00000004174 description:"augustus_masked-LSalAtl2s220-processed-gene-3.5")

HSP 1 Score: 83.9593 bits (206), Expect = 5.003e-17
Identity = 39/93 (41.94%), Postives = 49/93 (52.69%), Query Frame = 0

Query:  122 RPTQTLPKCPICSNSAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCT-----GSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQR 209
            RP      C IC + A  H +YGA  C SCR FF R+V       F+C       SG C I   +   C+FCRY+ CL AGM P+YV + E+R
Sbjct:  129 RPEPMTDVCRICGDIAPPHNHYGAIACFSCRAFFGRTVHKGTQERFRCVRGNPDESGQCMITKATRTHCQFCRYRGCLSAGMXPSYVTTAEER 221

HSP 2 Score: 78.5666 bits (192), Expect = 2.842e-15
Identity = 36/86 (41.86%), Postives = 47/86 (54.65%), Query Frame = 0

Query:  530 LCQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMC-----KASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEER 610
            +C++CG  A  HN+YG   C SCRAFF R+V   +   + C       SG C I   +R  C  CRY  CL AGM P ++ + EER
Sbjct:  136 VCRICGDIAPPHNHYGAIACFSCRAFFGRTVHKGTQERFRCVRGNPDESGQCMITKATRTHCQFCRYRGCLSAGMXPSYVTTAEER 221

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BLAST of retinoid x vs. L. salmonis genes
Match: EMLSAG00000008261 (supercontig:LSalAtl2s:LSalAtl2s49:858199:860758:1 gene:EMLSAG00000008261 transcript:EMLSAT00000008261 description:"maker-LSalAtl2s49-augustus-gene-8.3")

HSP 1 Score: 78.1814 bits (191), Expect = 3.285e-15
Identity = 44/107 (41.12%), Postives = 59/107 (55.14%), Query Frame = 0

Query:   99 LLSQEFFNSKPNPHDTIIVSAEFRPTQTLPKCPICSNSAGKHTYYGARTCLSCRGFFRRSV--QNQHHPIFKCTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYV 203
            L S  FF S+     T    A+F    T   C ICS++A  H +YGA  C SCR FFRR+V    ++H    C+    C I  ++ K C+FCR+ KCL+AGMK  +V
Sbjct:   35 LQSNMFFTSETMRTRTYKKRAKFIRKVT---CHICSDTANDHIHYGAIACXSCRAFFRRAVICNAEYH----CSRDKTCFITKETRKHCQFCRFNKCLEAGMKNTWV 134

HSP 2 Score: 78.1814 bits (191), Expect = 3.343e-15
Identity = 42/97 (43.30%), Postives = 57/97 (58.76%), Query Frame = 0

Query:  531 CQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMCKASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEERRVKREHKRAKVLKAKDV 627
            C +C   A  H +YG   C SCRAFFRR+V   +   Y C     C I  ++R+ C  CR+ KCLEAGM   W++S+ E+R K+E  R K LKA+ +
Sbjct:   63 CHICSDTANDHIHYGAIACXSCRAFFRRAVICNA--EYHCSRDKTCFITKETRKHCQFCRFNKCLEAGMKNTWVMSESEKREKKEKIRLKKLKAQQL 157

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BLAST of retinoid x vs. L. salmonis genes
Match: EMLSAG00000008902 (supercontig:LSalAtl2s:LSalAtl2s554:572309:581835:1 gene:EMLSAG00000008902 transcript:EMLSAT00000008902 description:"maker-LSalAtl2s554-snap-gene-5.6")

HSP 1 Score: 77.0258 bits (188), Expect = 8.617e-15
Identity = 34/83 (40.96%), Postives = 48/83 (57.83%), Query Frame = 0

Query:  130 CPICSNSAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRKER 212
            CP+C +    + +YG  TC SC+GFF+R+VQN+   ++ C    +C ID    K C +CR+QKCL  GMK   V+    R  R
Sbjct:  186 CPVCGDKVSGY-HYGLLTCESCKGFFKRTVQNKK--VYTCVADRSCVIDKTQRKRCPYCRFQKCLDVGMKLEAVRHDRMRGGR 265

HSP 2 Score: 74.3294 bits (181), Expect = 7.119e-14
Identity = 38/108 (35.19%), Postives = 61/108 (56.48%), Query Frame = 0

Query:  530 LCQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMCKASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEERRVKRE----HKRAKVLKAKDVKRDKVL 633
            LC VCG     + +YG   CESC+ FF+R+VQN+    Y C A  +C ID   R+ C  CR++KCL+ GM  + +  D  R  + +    +KR +  K + +++ +V+
Sbjct:  185 LCPVCGDKVSGY-HYGLLTCESCKGFFKRTVQNKK--VYTCVADRSCVIDKTQRKRCPYCRFQKCLDVGMKLEAVRHDRMRGGRNKFGPMYKRDRARKLQVLRQRQVI 289

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BLAST of retinoid x vs. L. salmonis genes
Match: EMLSAG00000005090 (supercontig:LSalAtl2s:LSalAtl2s269:306853:308464:-1 gene:EMLSAG00000005090 transcript:EMLSAT00000005090 description:"augustus_masked-LSalAtl2s269-processed-gene-3.0")

HSP 1 Score: 73.9442 bits (180), Expect = 6.715e-14
Identity = 39/110 (35.45%), Postives = 55/110 (50.00%), Query Frame = 0

Query:  506 VQAWSTLSESTLSPKTEDESVSLRLCQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMCKASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEERRVKRE 615
            VQ +S + E+    K      +  LC VCG  A  + +Y    CE C+ FFRRS+   S   Y CK +G C+ID   RR C  CR +KC   GM  + ++ +     KR+
Sbjct:  148 VQQYSQMVENERKKKGSSSRPAEELCLVCGDRASGY-HYNALACEGCKGFFRRSITKNS--NYTCKWNGDCEIDMYMRRKCQACRLKKCYATGMRAECVVPERTCIQKRQ 254

HSP 2 Score: 62.7734 bits (151), Expect = 2.742e-10
Identity = 57/228 (25.00%), Postives = 103/228 (45.18%), Query Frame = 0

Query:  122 RPTQTLPKCPICSNSAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQE---QRKERILQRYGSK--------KSQPNQINGSMKLQMHAV---MAGT--FTVEEHQCL--FGWYQKWHDFGASKSLDYFCDHVGVFQAILESSYEGKPMSNSAFRSMTKA---DEYVIVSYYFNEEEIQNLHFDDRMTLI 328
            RP + L  C +C + A  + +Y A  C  C+GFFRRS+    +  + C  +G+C ID    + C+ CR +KC   GM+   V  +    Q+++       +         KS  N  NGS+ + M +    ++ T     EE + +    ++Q+ ++  +   L+       V+   + S+   +  S+  FR MT+       +IV +  +    QNL  DD++ L+
Sbjct:  167 RPAEEL--CLVCGDRASGY-HYNALACEGCKGFFRRSITKNSN--YTCKWNGDCEIDMYMRRKCQACRLKKCYATGMRAECVVPERTCIQKRQAKAAAAAAAXXDTTVDPKSNNNGKNGSISIDMASFPKRLSSTKPLKPEEEELINRLVYFQEEYEHPSEADLNR------VYHVPMHSTNSSESESDRLFRHMTEMTILTVQLIVEFSKHLPGFQNLCRDDQINLL 383

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BLAST of retinoid x vs. L. salmonis genes
Match: EMLSAG00000008543 (supercontig:LSalAtl2s:LSalAtl2s527:163002:172818:1 gene:EMLSAG00000008543 transcript:EMLSAT00000008543 description:"maker-LSalAtl2s527-augustus-gene-1.53")

HSP 1 Score: 73.559 bits (179), Expect = 1.634e-13
Identity = 38/84 (45.24%), Postives = 51/84 (60.71%), Query Frame = 0

Query:  122 RPTQTLPKCPICSNSA-GKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQ 204
            +P Q+L  C IC + A G H  YG  TC  C+GFF+R+VQN+   I+ C   G C I+      C++CR+QKCLQ GM  A V+
Sbjct:  276 QPQQSL-VCMICEDRATGLH--YGIITCEGCKGFFKRTVQNKR--IYTCVADGECEINKAQRNRCQYCRFQKCLQKGMVLAAVR 354

HSP 2 Score: 67.0106 bits (162), Expect = 1.507e-11
Identity = 31/75 (41.33%), Postives = 42/75 (56.00%), Query Frame = 0

Query:  530 LCQVC-----GLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMCKASGACDIDSKSRRSCACCRYEKCLEAGM 599
            +C +C     GLH      YG   CE C+ FF+R+VQN+    Y C A G C+I+   R  C  CR++KCL+ GM
Sbjct:  282 VCMICEDRATGLH------YGIITCEGCKGFFKRTVQNKRI--YTCVADGECEINKAQRNRCQYCRFQKCLQKGM 348

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BLAST of retinoid x vs. L. salmonis genes
Match: EMLSAG00000007361 (supercontig:LSalAtl2s:LSalAtl2s418:374353:376789:1 gene:EMLSAG00000007361 transcript:EMLSAT00000007361 description:"maker-LSalAtl2s418-augustus-gene-3.13")

HSP 1 Score: 72.7886 bits (177), Expect = 1.745e-13
Identity = 38/115 (33.04%), Postives = 68/115 (59.13%), Query Frame = 0

Query:  126 TLPKCPICSNSA-GKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRKERILQRYGSKKSQPNQINGSMKLQMHAVM 239
             +  C +C + A GKH  YGA +C  C+GFFRRSV+ +   ++ C  +  C ++     +C++CR + C++AGMK + VQ++   ++RI  R   KK+    +N + +L + A++
Sbjct:  147 NIQNCAVCGDRATGKH--YGAASCDGCKGFFRRSVRKER--VYGCRQNRACIVNKDKRNNCRYCRLKMCIKAGMKKSAVQNE---RDRISCR---KKTSAKDMNSANELTVTALL 251

HSP 2 Score: 67.0106 bits (162), Expect = 1.153e-11
Identity = 34/91 (37.36%), Postives = 51/91 (56.04%), Query Frame = 0

Query:  531 CQVCGLHA-GKHNYYGGQVCESCRAFFRRSVQNQSYPTYMCKASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEERRVKREHKRAK 620
            C VCG  A GKH  YG   C+ C+ FFRRSV+ +    Y C+ + AC ++   R +C  CR + C++AGM    + ++ +R   R+   AK
Sbjct:  151 CAVCGDRATGKH--YGAASCDGCKGFFRRSVRKER--VYGCRQNRACIVNKDKRNNCRYCRLKMCIKAGMKKSAVQNERDRISCRKKTSAK 237

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BLAST of retinoid x vs. L. salmonis genes
Match: EMLSAG00000008071 (supercontig:LSalAtl2s:LSalAtl2s47:304551:317770:1 gene:EMLSAG00000008071 transcript:EMLSAT00000008071 description:"snap_masked-LSalAtl2s47-processed-gene-3.10")

HSP 1 Score: 72.0182 bits (175), Expect = 3.085e-13
Identity = 41/122 (33.61%), Postives = 67/122 (54.92%), Query Frame = 0

Query:  500 PCSGEDVQAWSTLSESTLSPK--TEDESVSLRLCQVCG-LHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMCKASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEERRVKREHKR 618
            P    D    S+ SE+ L  +   ++E    R C VCG + +G H  YG   CE+C+AFF+R++Q      Y   AS  C+I+ + R++C  CR++KCL  GM  + +  D  R  +++++R
Sbjct:  238 PPGSPDHHLCSSTSETNLFSRDIIKEEEGQRRTCLVCGDIASGFH--YGVSSCEACKAFFKRTIQGNI--EYTXPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRR 355

HSP 2 Score: 56.6102 bits (135), Expect = 1.857e-8
Identity = 29/88 (32.95%), Postives = 47/88 (53.41%), Query Frame = 0

Query:  130 CPICSNSAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRKERILQRY 217
            C +C + A    +YG  +C +C+ FF+R++Q      +    S  C I+ +  K+C+ CR+QKCL+ GM    V+    R  R  Q+Y
Sbjct:  271 CLVCGDIASGF-HYGVSSCEACKAFFKRTIQGNIE--YTXPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGR--QKY 353

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BLAST of retinoid x vs. SwissProt
Match: gi|6016234|sp|P79926.1|HNF4B_XENLA (RecName: Full=Hepatocyte nuclear factor 4-beta; Short=HNF-4-beta; AltName: Full=Nuclear receptor subfamily 2 group A member 3)

HSP 1 Score: 82.8037 bits (203), Expect = 2.374e-15
Identity = 54/157 (34.39%), Postives = 80/157 (50.96%), Query Frame = 0

Query:   85 PDLSEFMDEQTIMDLLSQEFFNSKPNPHDTIIVSAEFRPTQTLPK-----CPICSNSA-GKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRKERILQRYGSKKSQPNQINGSMKLQM 235
            PD +E +D    M     EF + +  P +T I++ E      L       C IC + A GKH  YGA +C  C+GFFRRSV+  H  ++ C  S  C +D      C++CR +KC +AGMK   VQ++   ++RI  R  S +      NGS+ + +
Sbjct:    4 PDYTETLDSSYTM----LEFDSIRVLPSNTEIITVETASPGLLNNGINSFCAICGDRATGKH--YGASSCDGCKGFFRRSVRKNH--VYACRFSRQCIVDKDKRNQCRYCRLRKCFRAGMKKEAVQNE---RDRISMRRSSYED-----NGSLSINV 144

HSP 2 Score: 66.2402 bits (160), Expect = 4.933e-10
Identity = 35/100 (35.00%), Postives = 51/100 (51.00%), Query Frame = 0

Query:  512 LSESTLSPKTEDESVSLRLCQVCGLHA-GKHNYYGGQVCESCRAFFRRSVQNQSYPTYMCKASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEER 610
            ++  T SP   +  ++   C +CG  A GKH  YG   C+ C+ FFRRSV+      Y C+ S  C +D   R  C  CR  KC  AGM  + + ++ +R
Sbjct:   32 ITVETASPGLLNNGIN-SFCAICGDRATGKH--YGASSCDGCKGFFRRSVRKNH--VYACRFSRQCIVDKDKRNQCRYCRLRKCFRAGMKKEAVQNERDR 126

[Close]

BLAST of retinoid x vs. SwissProt
Match: gi|205371750|sp|P49880.2|ECR_AEDAE (RecName: Full=Ecdysone receptor; AltName: Full=20-hydroxy-ecdysone receptor; Short=20E receptor; AltName: Full=EcRH; Short=AaEcR; AltName: Full=Ecdysteroid receptor; AltName: Full=Nuclear receptor subfamily 1 group H member 1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.885e-15
Identity = 57/181 (31.49%), Postives = 86/181 (47.51%), Query Frame = 0

Query:  468 YTTTMINFDTSPLEALITDQF-IHDILSEDVIDPCSGEDVQAWSTLSESTLSPKTEDESVSLRLCQVCG-LHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMCKASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEERRVKREHKRAKVLKAK-----------DVKRDKVLPI 635
            YTTTM N  +SP+     D +  +  +  + + P S   +  ++  S++    K         LC VCG   +G H  Y    CE C+ FFRRSV   +   Y CK   AC++D   RR C  CR +KCL  GM P+ ++ + +  +KR+ K+A+  K K              R ++LPI
Sbjct:  229 YTTTMSNGYSSPMSTGSYDPYSPNGKMGREDLSPSS--SLNGYTDGSDAKKQKKGPTPRQQEELCLVCGDRESGYH--YNALTCEGCKGFFRRSVTKNA--VYCCKFGHACEMDMYMRRKCQECRLKKCLAVGMRPECVVPENQCAIKRKEKKAQKEKDKVQTNATVSTTNSTYRSEILPI 403

HSP 2 Score: 60.8474 bits (146), Expect = 4.079e-8
Identity = 37/103 (35.92%), Postives = 52/103 (50.49%), Query Frame = 0

Query:  123 PTQTLPKCPICSN-SAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQ----RKERILQRYGSK 220
            P Q    C +C +  +G H  Y A TC  C+GFFRRSV    + ++ C     C +D    + C+ CR +KCL  GM+P  V  + Q    RKE+  Q+   K
Sbjct:  284 PRQQEELCLVCGDRESGYH--YNALTCEGCKGFFRRSVTK--NAVYCCKFGHACEMDMYMRRKCQECRLKKCLAVGMRPECVVPENQCAIKRKEKKAQKEKDK 382

[Close]

BLAST of retinoid x vs. SwissProt
Match: gi|160221327|sp|P79387.3|STF1_PIG (RecName: Full=Steroidogenic factor 1; Short=SF-1; Short=STF-1; AltName: Full=Adrenal 4-binding protein; AltName: Full=Fushi tarazu factor homolog 1; AltName: Full=Nuclear receptor subfamily 5 group A member 1; AltName: Full=Steroid hormone receptor Ad4BP)

HSP 1 Score: 81.6481 bits (200), Expect = 6.164e-15
Identity = 41/108 (37.96%), Postives = 59/108 (54.63%), Query Frame = 0

Query:  130 CPICSNSAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRKERILQRYGSKKSQPNQINGSMKLQMHA 237
            CP+C +    + +YG  TC SC+GFF+R+VQN  H  + CT S +C ID    K C FCR+QKCL  GM+   V++   R  R   ++G    +   +    K Q+ A
Sbjct:   13 CPVCGDKVSGY-HYGLLTCESCKGFFKRTVQNNKH--YTCTESQSCKIDKTQRKRCPFCRFQKCLTVGMRLEAVRADRMRGGR--NKFGPMYKRDRALKQQKKAQIRA 115

HSP 2 Score: 72.4034 bits (176), Expect = 5.273e-12
Identity = 38/100 (38.00%), Postives = 56/100 (56.00%), Query Frame = 0

Query:  530 LCQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMCKASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEERRVKRE----HKRAKVLKAK 625
            LC VCG     + +YG   CESC+ FF+R+VQN  +  Y C  S +C ID   R+ C  CR++KCL  GM  + + +D  R  + +    +KR + LK +
Sbjct:   12 LCPVCGDKVSGY-HYGLLTCESCKGFFKRTVQNNKH--YTCTESQSCKIDKTQRKRCPFCRFQKCLTVGMRLEAVRADRMRGGRNKFGPMYKRDRALKQQ 108

[Close]

BLAST of retinoid x vs. SwissProt
Match: gi|416584|sp|Q04752.1|STF1_BOVIN (RecName: Full=Steroidogenic factor 1; Short=SF-1; Short=STF-1; AltName: Full=Adrenal 4-binding protein; AltName: Full=Fushi tarazu factor homolog 1; AltName: Full=Nuclear receptor subfamily 5 group A member 1; AltName: Full=Steroid hormone receptor Ad4BP)

HSP 1 Score: 81.6481 bits (200), Expect = 7.229e-15
Identity = 41/108 (37.96%), Postives = 59/108 (54.63%), Query Frame = 0

Query:  130 CPICSNSAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRKERILQRYGSKKSQPNQINGSMKLQMHA 237
            CP+C +    + +YG  TC SC+GFF+R+VQN  H  + CT S +C ID    K C FCR+QKCL  GM+   V++   R  R   ++G    +   +    K Q+ A
Sbjct:   13 CPVCGDKVSGY-HYGLLTCESCKGFFKRTVQNNKH--YTCTESQSCKIDKTQRKRCPFCRFQKCLTVGMRLEAVRADRMRGGR--NKFGPMYKRDRALKQQKKAQIRA 115

HSP 2 Score: 72.4034 bits (176), Expect = 6.509e-12
Identity = 38/98 (38.78%), Postives = 55/98 (56.12%), Query Frame = 0

Query:  530 LCQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMCKASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEERRVKRE----HKRAKVLK 623
            LC VCG     + +YG   CESC+ FF+R+VQN  +  Y C  S +C ID   R+ C  CR++KCL  GM  + + +D  R  + +    +KR + LK
Sbjct:   12 LCPVCGDKVSGY-HYGLLTCESCKGFFKRTVQNNKH--YTCTESQSCKIDKTQRKRCPFCRFQKCLTVGMRLEAVRADRMRGGRNKFGPMYKRDRALK 106

[Close]

BLAST of retinoid x vs. SwissProt
Match: gi|1703164|sp|P50569.1|STF1_RAT (RecName: Full=Steroidogenic factor 1; Short=SF-1; Short=STF-1; AltName: Full=Adrenal 4-binding protein; AltName: Full=Fushi tarazu factor homolog 1; AltName: Full=Nuclear receptor subfamily 5 group A member 1; AltName: Full=Steroid hormone receptor Ad4BP)

HSP 1 Score: 81.6481 bits (200), Expect = 7.267e-15
Identity = 41/108 (37.96%), Postives = 59/108 (54.63%), Query Frame = 0

Query:  130 CPICSNSAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRKERILQRYGSKKSQPNQINGSMKLQMHA 237
            CP+C +    + +YG  TC SC+GFF+R+VQN  H  + CT S +C ID    K C FCR+QKCL  GM+   V++   R  R   ++G    +   +    K Q+ A
Sbjct:   13 CPVCGDKVSGY-HYGLLTCESCKGFFKRTVQNNKH--YTCTESQSCKIDKTQRKRCPFCRFQKCLTVGMRLEAVRADRMRGGR--NKFGPMYKRDRALKQQKKAQIRA 115

HSP 2 Score: 72.7886 bits (177), Expect = 4.325e-12
Identity = 38/100 (38.00%), Postives = 56/100 (56.00%), Query Frame = 0

Query:  530 LCQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMCKASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEERRVKRE----HKRAKVLKAK 625
            LC VCG     + +YG   CESC+ FF+R+VQN  +  Y C  S +C ID   R+ C  CR++KCL  GM  + + +D  R  + +    +KR + LK +
Sbjct:   12 LCPVCGDKVSGY-HYGLLTCESCKGFFKRTVQNNKH--YTCTESQSCKIDKTQRKRCPFCRFQKCLTVGMRLEAVRADRMRGGRNKFGPMYKRDRALKQQ 108

[Close]

BLAST of retinoid x vs. SwissProt
Match: gi|341942103|sp|P33242.3|STF1_MOUSE (RecName: Full=Steroidogenic factor 1; Short=SF-1; Short=STF-1; AltName: Full=Adrenal 4-binding protein; AltName: Full=Embryonal LTR-binding protein; Short=ELP; AltName: Full=Embryonal long terminal repeat-binding protein; AltName: Full=Fushi tarazu factor homolog 1; AltName: Full=Nuclear receptor subfamily 5 group A member 1; AltName: Full=Steroid hormone receptor Ad4BP; AltName: Full=Steroid hydroxylase positive regulator)

HSP 1 Score: 81.6481 bits (200), Expect = 7.331e-15
Identity = 41/108 (37.96%), Postives = 59/108 (54.63%), Query Frame = 0

Query:  130 CPICSNSAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRKERILQRYGSKKSQPNQINGSMKLQMHA 237
            CP+C +    + +YG  TC SC+GFF+R+VQN  H  + CT S +C ID    K C FCR+QKCL  GM+   V++   R  R   ++G    +   +    K Q+ A
Sbjct:   13 CPVCGDKVSGY-HYGLLTCESCKGFFKRTVQNNKH--YTCTESQSCKIDKTQRKRCPFCRFQKCLTVGMRLEAVRADRMRGGR--NKFGPMYKRDRALKQQKKAQIRA 115

HSP 2 Score: 72.7886 bits (177), Expect = 4.441e-12
Identity = 38/100 (38.00%), Postives = 56/100 (56.00%), Query Frame = 0

Query:  530 LCQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMCKASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEERRVKRE----HKRAKVLKAK 625
            LC VCG     + +YG   CESC+ FF+R+VQN  +  Y C  S +C ID   R+ C  CR++KCL  GM  + + +D  R  + +    +KR + LK +
Sbjct:   12 LCPVCGDKVSGY-HYGLLTCESCKGFFKRTVQNNKH--YTCTESQSCKIDKTQRKRCPFCRFQKCLTVGMRLEAVRADRMRGGRNKFGPMYKRDRALKQQ 108

[Close]

BLAST of retinoid x vs. SwissProt
Match: gi|49036491|sp|Q95L87.1|STF1_MACEU (RecName: Full=Steroidogenic factor 1; Short=SF-1; Short=STF-1; AltName: Full=Nuclear receptor subfamily 5 group A member 1)

HSP 1 Score: 81.6481 bits (200), Expect = 7.434e-15
Identity = 37/83 (44.58%), Postives = 50/83 (60.24%), Query Frame = 0

Query:  130 CPICSNSAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRKER 212
            CP+C +    + +YG  TC SC+GFF+R+VQN  H  + CT S NC ID    K C +CR+QKCL  GM+   V++   R  R
Sbjct:   13 CPVCGDKVSGY-HYGLLTCESCKGFFKRTVQNNKH--YTCTESQNCKIDKTQRKRCPYCRFQKCLTVGMRLEAVRADRMRGGR 92

HSP 2 Score: 71.633 bits (174), Expect = 1.211e-11
Identity = 42/117 (35.90%), Postives = 61/117 (52.14%), Query Frame = 0

Query:  530 LCQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMCKASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEERRVKRE----HKRAKVLKAKDVKRDKVLPISRGLDFE 642
            LC VCG     + +YG   CESC+ FF+R+VQN  +  Y C  S  C ID   R+ C  CR++KCL  GM  + + +D  R  + +    +KR + LK    ++ K L  + G   E
Sbjct:   12 LCPVCGDKVSGY-HYGLLTCESCKGFFKRTVQNNKH--YTCTESQNCKIDKTQRKRCPYCRFQKCLTVGMRLEAVRADRMRGGRNKFGPMYKRDRALK----QQKKALIRANGFKLE 121

[Close]

BLAST of retinoid x vs. SwissProt
Match: gi|3121738|sp|Q13285.2|STF1_HUMAN (RecName: Full=Steroidogenic factor 1; Short=SF-1; Short=STF-1; Short=hSF-1; AltName: Full=Adrenal 4-binding protein; AltName: Full=Fushi tarazu factor homolog 1; AltName: Full=Nuclear receptor subfamily 5 group A member 1; AltName: Full=Steroid hormone receptor Ad4BP)

HSP 1 Score: 81.6481 bits (200), Expect = 7.829e-15
Identity = 41/108 (37.96%), Postives = 59/108 (54.63%), Query Frame = 0

Query:  130 CPICSNSAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRKERILQRYGSKKSQPNQINGSMKLQMHA 237
            CP+C +    + +YG  TC SC+GFF+R+VQN  H  + CT S +C ID    K C FCR+QKCL  GM+   V++   R  R   ++G    +   +    K Q+ A
Sbjct:   13 CPVCGDKVSGY-HYGLLTCESCKGFFKRTVQNNKH--YTCTESQSCKIDKTQRKRCPFCRFQKCLTVGMRLEAVRADRMRGGR--NKFGPMYKRDRALKQQKKAQIRA 115

HSP 2 Score: 72.7886 bits (177), Expect = 4.958e-12
Identity = 38/98 (38.78%), Postives = 55/98 (56.12%), Query Frame = 0

Query:  530 LCQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMCKASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEERRVKRE----HKRAKVLK 623
            LC VCG     + +YG   CESC+ FF+R+VQN  +  Y C  S +C ID   R+ C  CR++KCL  GM  + + +D  R  + +    +KR + LK
Sbjct:   12 LCPVCGDKVSGY-HYGLLTCESCKGFFKRTVQNNKH--YTCTESQSCKIDKTQRKRCPFCRFQKCLTVGMRLEAVRADRMRGGRNKFGPMYKRDRALK 106

[Close]

BLAST of retinoid x vs. SwissProt
Match: gi|44889025|sp|P49867.2|FTZF1_BOMMO (RecName: Full=Nuclear hormone receptor FTZ-F1; AltName: Full=BmFTZ-F1; AltName: Full=Nuclear receptor subfamily 5 group A member 3)

HSP 1 Score: 82.0333 bits (201), Expect = 8.041e-15
Identity = 42/114 (36.84%), Postives = 64/114 (56.14%), Query Frame = 0

Query:  498 IDPCSGEDVQAWSTL-SESTLSPKTEDESVSLRLCQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMCKASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEER 610
            +DP +G   +  + L +  T+  +T+ + V   LC VCG     + +YG   CESC+ FF+R+VQN+    Y C A  AC ID   R+ C  CR++KCL+ GM  + + +D  R
Sbjct:   55 VDPTTGTGGEPGAYLPTAGTVCDQTDTKDVIEELCPVCGDKVSGY-HYGLLTCESCKGFFKRTVQNKK--VYTCVAERACHIDKTQRKRCPFCRFQKCLDVGMKLEAVRADRMR 165

HSP 2 Score: 78.9518 bits (193), Expect = 6.584e-14
Identity = 35/83 (42.17%), Postives = 48/83 (57.83%), Query Frame = 0

Query:  130 CPICSNSAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRKER 212
            CP+C +    + +YG  TC SC+GFF+R+VQN+   ++ C     C ID    K C FCR+QKCL  GMK   V++   R  R
Sbjct:   89 CPVCGDKVSGY-HYGLLTCESCKGFFKRTVQNKK--VYTCVAERACHIDKTQRKRCPFCRFQKCLDVGMKLEAVRADRMRGGR 168

[Close]

BLAST of retinoid x vs. SwissProt
Match: gi|12230057|sp|Q9YH33.1|ESR1_ORENI (RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha; AltName: Full=Estradiol receptor; AltName: Full=Nuclear receptor subfamily 3 group A member 1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.036e-14
Identity = 43/108 (39.81%), Postives = 59/108 (54.63%), Query Frame = 0

Query:  529 RLCQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMCKASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEERRVKREHKRA--KVLKAKDVKRDKVLP 634
            R C VC  +A  + +YG   CE C+AFF+RS+Q  +   YMC A+  C ID   R+SC  CR  KC E GM    +  D  R ++RE +RA  +   AKD+   +  P
Sbjct:  137 RFCAVCSDYASGY-HYGVWSCEGCKAFFKRSIQGHN--DYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGMRKDRGRVLRREKRRACDRDKPAKDLPHTRASP 241

HSP 2 Score: 65.855 bits (159), Expect = 9.850e-10
Identity = 32/97 (32.99%), Postives = 51/97 (52.58%), Query Frame = 0

Query:  130 CPICSNSAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRKERILQRYGSKKSQPNQ 226
            C +CS+ A  + +YG  +C  C+ FF+RS+Q   H  + C  +  CTID    KSC+ CR +KC + GM    ++    R  R  +R    + +P +
Sbjct:  139 CAVCSDYASGY-HYGVWSCEGCKAFFKRSIQG--HNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGMRKDRGRVLRREKRRACDRDKPAK 232

[Close]

BLAST of retinoid x vs. nr
Match: gi|728054567|gb|AIY67763.1| (HR97a-like receptor 4 [Tigriopus japonicus])

HSP 1 Score: 381.333 bits (978), Expect = 4.864e-120
Identity = 206/434 (47.47%), Postives = 291/434 (67.05%), Query Frame = 0

Query:  474 NFDTSPLEALITDQFIHDILSEDVIDPC----SGEDVQAWSTLSESTLSPKTEDESVSL------RLCQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMCKASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEERRVKREHKRAKVLKAKDVKRDKVLPISRGLDFEFTTEEELKVMQIRNYAKTCKLNHMALTMAKDGGPLTVLWDVIFNKQNVPLKFLETVENREKALFQGISMGLEEMTEIDVEDRQTLVQENGSAFFALIMSLYSIPNNFKKLMNDLTRTLE-QMSRTNPNVRLTNVLDTLEVLKLSPGNHPTYETFYGNVSQSNKTLSEAHRALVTKIQHAVGSFENNPPDEMIVCLVILNLVFRSHGAK-LHNKAKVERVQNNFAFMLYRYLKSRFAQKAGSKMAKALMLTTYTTE 895
            +FD S LE+ ITDQFI DIL+++ ++P       E        S  +L  K +  S S       RLC VC L AGKHNYYGGQVCESCRAFFRRS+QNQ++P Y CKA   C IDSKSR+SCA CR++KCL AGMNPKWII+D+ER+ K E K++K++KAK   + +++PI R ++ +FT EE+LKV ++  YA+  K++ +A  +A+D  PL  LW +  N +   + F+  +E +E  +F+ I++GLEEMT++D EDR+TLVQ N +AFFALIMS+Y  P +F + + D+T  L+  +   +PN  L N ++TLEV+K+S     ++ETFY N    ++ LS A R ++ KIQ A+    N P D +I+C+VILNL+F S G+  L +  KVER+QN+  FML+RYL+S++  KA  KM K +ML +YT E
Sbjct:    5 DFDQS-LESFITDQFICDILTQEPLEPFDLIDEEEPSSNSPISSNDSLPIKIKRSSSSSLQIQCPRLCHVCNLPAGKHNYYGGQVCESCRAFFRRSIQNQTHPIYHCKAKKCCIIDSKSRKSCAWCRFQKCLLAGMNPKWIITDQERKFKLEAKQSKIMKAK--MKQEIVPIQRPVELKFTVEEKLKVERLSKYARKFKVSVLANHLAQDIAPLKTLWKLALNLETPSVDFIHFLEEKETTIFRTIALGLEEMTDLDSEDRETLVQRNSTAFFALIMSIYFNPGDFARHLEDVTEALDIALQANDPNPDLKNAVETLEVIKMSNFPGLSFETFYSNCPNKDENLSNAQRNIMNKIQSALREMPNKPIDAIIICIVILNLIFLSDGSSPLKDGKKVERIQNDQIFMLHRYLRSKYGDKASGKMGKLVMLMSYTQE 435

HSP 2 Score: 129.413 bits (324), Expect = 4.488e-28
Identity = 94/351 (26.78%), Postives = 161/351 (45.87%), Query Frame = 0

Query:  130 CPICSNSAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRKERILQRYGSKKSQPNQINGSMKLQMHAVMAGT---FTVEEHQCLFGWYQKWHDFGASKSLDYFCDHVGVFQAILESSYEGKPMSNSAFRSMTKADEYVIVSYYFNEEEIQNLHFDDRMTLIARNFAVLYGLLWGSFSTLDDPDAQMQTY---FDFCLRNAANNPRYHSLLDLWQ-----NFVDNGKRVSPYHCGLIQRDSFPDSLKYRQYINDTEKIGSVMASD-NALDAILMIILNYICFYSTDFPDQLREGEKIKTKQNNYLALLHRY 468
            C +C+  AGKH YYG + C SCR FFRRS+QNQ HPI+ C     C IDSKS KSC +CR+QKCL AGM P ++ + ++RK      +  +  Q   +   MK ++  +       FTVEE   +    +    F  S   ++    +   + + + +   +  S      + + +  +  +     EE+ +L  +DR TL+ RN    + L+   +    D    ++      D  L+    NP   + ++  +     NF   G     ++     +D    + + R  +N  +     M +       I ++ILN I  + +D    L++G+K++  QN+ + +LHRY
Sbjct:   71 CHVCNLPAGKHNYYGGQVCESCRAFFRRSIQNQTHPIYHCKAKKCCIIDSKSRKSCAWCRFQKCLLAGMNPKWIITDQERK------FKLEAKQSKIMKAKMKQEIVPIQRPVELKFTVEEKLKVERLSKYARKFKVSVLANHLAQDIAPLKTLWKLALNLETPSVDFIHFLEEKETTIFRTIALGLEEMTDLDSEDRETLVQRNSTAFFALIMSIYFNPGDFARHLEDVTEALDIALQANDPNPDLKNAVETLEVIKMSNF--PGLSFETFYSNCPNKDENLSNAQ-RNIMNKIQSALREMPNKPIDAIIICIVILNLI--FLSDGSSPLKDGKKVERIQNDQIFMLHRY 410

[Close]

BLAST of retinoid x vs. nr
Match: gi|657600350|gb|AID52836.1| (nuclear receptor [Tigriopus japonicus])

HSP 1 Score: 164.851 bits (416), Expect = 5.560e-40
Identity = 109/354 (30.79%), Postives = 183/354 (51.69%), Query Frame = 0

Query:  128 PKCPICSNSAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFK-CTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRKERILQRYGSKKSQPNQINGSMKLQMHAVMAGTFTVEEHQCLFGWYQKWHDFGASKSLDYFCDHVGVFQAILESSYE---GKPMSNSAFRSMTKADEYVIVSYYFNEEEIQNLHFDDRMTLIARNFAVLYGLLWGSFSTLDDPDAQMQTYFDFCLRNAAN----NPRYHSLLDLWQNFVDNGKRVSPYHCGLIQRDSFPDSLKYRQYINDTEKIGSVM--ASDNALDAILMIILNYICFYSTDFPDQLREGEKIKTKQNNYLALLHRYTTT 471
            P CPIC++ AGKH YYG + C+SCRGFF+RSV+N+ H  F  C G+ NC I ++S K+CK+CR+QKCLQ+GMK  YV + ++           K      I   +K    A ++  FT  E       Y+    FG       F  +   F   L +  +   G  M + AF   T+ ++   ++Y+F+ +++ +L   DRMTLI+ NF  ++GLLW  +S   D    + T+++  L++        P    +L +++     GK+       +  R +       +++ N   ++ S +  +S ++ D I++++L++I  ++T+F   L++  KI+  Q  YL LLHRY  T
Sbjct:   89 PLCPICNDVAGKHFYYGVQACISCRGFFQRSVRNRFHLKFICCKGTQNCRITARSRKNCKWCRFQKCLQSGMKTCYVMTHDKSG------LPPKSKLILPIKAMVKT---ANLSQIFTEHEVDKALSIYKNLLSFGYRSYYQLFSQNEQEFMTFLRALNDQGGGPSMISEAF---TETNKQATINYFFSIDDMASLTPFDRMTLISHNFPSIFGLLWSVYSYTPD----LCTFYEEFLKHGYEFRDREPEIDKILMVFEANQLLGKKPKNLTIDVTFRSNSATQDLIQRHDNLVHEVNSGLRESSQSSADYIIVMLLSHIIMFATEFAVSLQDKAKIQATQEKYLVLLHRYLRT 426

HSP 2 Score: 128.257 bits (321), Expect = 1.218e-27
Identity = 89/363 (24.52%), Postives = 168/363 (46.28%), Query Frame = 0

Query:  530 LCQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYM-CKASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEERRVKREHKRAKVLKAKDVKRDKVLPISRGLDFEFTTEEELKVMQIRNYAKTCKLNHMALTMAKDGGPLTVLWDVIFNKQNVPLKFLETVENREKALFQGISMGLEEMTEIDVEDRQTLVQENGSAFFALIMSLYSIPNNFKKLMNDLTRTLEQMSRTNPNV-RLTNVLDTLEVLKLSPGNHPTYETFYGNVSQSNKTLSEAHRALVTKIQHAVGSFENNPPDEMIVCLVILNLVFRSHGA-KLHNKAKVERVQNNFAFMLYRYLKSRFAQKAGSKMAKALML 889
            LC +C   AGKH YYG Q C SCR FF+RSV+N+ +  ++ CK +  C I ++SR++C  CR++KCL++GM   ++++ +        K     K+K +   K +  +  L   FT  E  K + I     +          +++          + ++   P    E      K         +++M  +   DR TL+  N  + F L+ S+YS   +      +  +   +     P + ++  V +  ++L   P N     TF  N   + + L + H  LV ++   +     +  D +IV L+   ++F +  A  L +KAK++  Q  +  +L+RYL++ +  +A +K+++ +M+
Sbjct:   90 LCPICNDVAGKHFYYGVQACISCRGFFQRSVRNRFHLKFICCKGTQNCRITARSRKNCKWCRFQKCLQSGMKTCYVMTHD--------KSGLPPKSKLILPIKAMVKTANLSQIFTEHEVDKALSIYKNLLSFGYRSYYQLFSQNEQEFMTFLRALNDQGGGPSMISEAFTETNKQATINYFFSIDDMASLTPFDRMTLISHNFPSIFGLLWSVYSYTPDLCTFYEEFLKHGYEFRDREPEIDKILMVFEANQLLGKKPKNLTIDVTFRSN--SATQDLIQRHDNLVHEVNSGLRESSQSSADYIIVMLLSHIIMFATEFAVSLQDKAKIQATQEKYLVLLHRYLRTHYQGRARAKLSETMMI 442

[Close]

BLAST of retinoid x vs. nr
Match: gi|657600348|gb|AID52835.1| (nuclear receptor [Tigriopus japonicus])

HSP 1 Score: 151.754 bits (382), Expect = 2.425e-35
Identity = 114/389 (29.31%), Postives = 186/389 (47.81%), Query Frame = 0

Query:  518 SPKTEDESVSLRLCQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMCKASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEERRVKREHKRAKVLKAKDVKRDKVLPISRGLDFEFTTEEELKVMQIRNYAKTCKLNHMALTMAKDGGPLTVLWDVIFNKQNVPLKFLETVENRE---KALFQGISMGLEEMTEIDVEDRQTLVQENGSAF--------FALIMSLYSIPNNFKKLMNDLTRTLEQMSRTNPNVRLTNVLDTLEVLKLSPGNHPTYETFYGNVSQSNKTLSEAHRALVTKIQHAVGSFENNPPDEMIVCLVILNLVFRSHGAKLHNKAKVERVQNNFAFMLYRYLKSRFAQKAGSKMAKALMLTTYTTE 895
            +P+T + S   R C VC   +GKH+YYG QVC SCRAFFRRS  N ++  + CK S  C I+SKS +SC  CRY+KCL AGM   W+++DEE RV+R   R ++ K   ++   V      +  ++TT+EE ++ Q RN         +A   + +        D +    N P   +     R      + + IS  L  M +I   DR  L+  N   +        F     +  I   F K +    RTL+  S   PN  + ++  T +  KLS  ++  +     N+  +++++      L+T IQ           D++++ L+ + L+F S   KL ++  V ++QN + +MLYRY+  +   KA  K+ + + + +   E
Sbjct:   95 TPRTPNLSKPHRECPVCDNPSGKHSYYGAQVCFSCRAFFRRSTINSTFTEFQCKDSKTCGINSKSWKSCKFCRYQKCLSAGMKSTWVLNDEE-RVQRNANRKRLRK---IREAGVAFSETFIGNQWTTDEEHQIRQARNDFLLKGFGVIAQFCSSNPNIFDRYVDCL--NGNTPFDPMLVGYTRRFIYSEVMKSIS-DLLIMKDIHPVDRFLLLSHNYPLWVSFEEAVQFRNHQEMEKIQQTFSKCI----RTLKSSSDLWPNANIDHLQRTFD--KLSVHDNANFLDKLNNLI-TDQSMRRRRTQLITSIQSWPKISSRGLADDILLTLMTMILIFSSDSLKLQSEGVVSKIQNQYCYMLYRYVNFKSPGKAHVKLGEGMEIVSKVRE 469

HSP 2 Score: 129.413 bits (324), Expect = 7.375e-28
Identity = 125/435 (28.74%), Postives = 190/435 (43.68%), Query Frame = 0

Query:   97 MDLLS-QEFFNSKPNPHDTIIV------------SAEFRPTQTLP-------KCPICSNSAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRKERILQRYGSKKSQPNQINGSMKLQMHAVMAGTFTV-EEHQCLFGWYQKWHDF---GASKSLDYFCDHVGVFQAILESSYEGKPMSNSAFRSMTKADEYVIVSYYFNEEEI-QNLHFDDRMTLIARNFAVLYGLLWGSFSTL-----DDPDAQMQTYFDFCLRNAANNPRYHSLLDLWQNF-VDNGKRVSPYHCGLIQRDSFPDSLKYRQYIND-----------TEKIGSV-----MASDNALDAILMIILNYICFYSTDFPDQLREGEKIKTKQNNYLALLHRYTTTMINFDTSPLEALI 484
            +D +S QE  N  P   DT  +            S++F  T   P       +CP+C N +GKH+YYGA+ C SCR FFRRS  N     F+C  S  C I+SKSWKSCKFCRYQKCL AGMK  +V + E+R +R   R   +K +   +  S        +   +T  EEHQ      Q  +DF   G      +   +  +F   ++      P  +      T+   Y  V    ++  I +++H  DR  L++ N+      LW SF             ++Q  F  C+R   ++       DLW N  +D+ +R          + S  D+  +   +N+           T+ I S+     ++S    D IL+ ++  I  +S+D      EG  +   QN Y  +L+RY    +NF  SP +A +
Sbjct:   55 LDTISLQELMNVAPVECDTQTITNDPNIVSQTEDSSDFSDTPRTPNLSKPHRECPVCDNPSGKHSYYGAQVCFSCRAFFRRSTINSTFTEFQCKDSKTCGINSKSWKSCKFCRYQKCLSAGMKSTWVLNDEERVQRNANRKRLRKIREAGVAFS-----ETFIGNQWTTDEEHQI----RQARNDFLLKGFGVIAQFCSSNPNIFDRYVDCLNGNTPF-DPMLVGYTRRFIYSEVMKSISDLLIMKDIHPVDRFLLLSHNYP-----LWVSFEEAVQFRNHQEMEKIQQTFSKCIRTLKSSS------DLWPNANIDHLQRT-------FDKLSVHDNANFLDKLNNLITDQSMRRRRTQLITSIQSWPKISSRGLADDILLTLMTMILIFSSDSLKLQSEG-VVSKIQNQYCYMLYRY----VNF-KSPGKAHV 455

[Close]

BLAST of retinoid x vs. nr
Match: gi|657600346|gb|AID52834.1| (nuclear receptor [Tigriopus japonicus])

HSP 1 Score: 144.821 bits (364), Expect = 5.854e-33
Identity = 113/392 (28.83%), Postives = 193/392 (49.23%), Query Frame = 0

Query:  531 CQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMCKASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEERRVKR-EHKRAKVLKAKDVKRDKVLPISRGLDFEFTTEEELKVMQIRN--YAKTCKLNHMALTMAK--DGGPLTVLWDVIFNKQNVPLKFLETVENR---EKALF----QGISMGLEEMTEIDVEDRQTLVQENGSAFFALIMSLYSIPNNFKKLMNDLTRTLEQMSRTNPNVRLT--------------NVLDTLEVL-KLSPGNHPTYETFYGNVSQSNKTLSEAHRALVTKIQHAVGSFENNPPDEMIVCLVILNLVFRSHGAKLHNKAKVERVQNNFAFMLYRYLKSRFAQKAGSKMAKALMLTTYTTE 895
            C VCG  +GKH YYG QVC SCRAFFRRS  N +   + CKA   C IDSKS +SC  CR++KCL AGM P W+++DEER  +  + KR +  +  +V  + VL        ++T +E+L++  IR   + KT      +  +AK     P+      I N      KF+    NR   +  L     + +S G+ +M      +   L   N    F L+   Y++ ++F++ +  L +  +++ +   NVR +              NV    E + K+S  ++        N+ Q  +T  +  R+L+T IQ       N   D+++  L+++ L+      +L++++ V + QN + ++LYRY+ S++  +A SK+ + + + +   E
Sbjct:  115 CPVCGNPSGKHLYYGAQVCSSCRAFFRRSTINSAAEEFRCKADKKCGIDSKSWKSCKFCRFQKCLSAGMRPNWVMNDEERTQRNAKRKRTRTKRVDNVVSEAVLS------HQWTVDEDLQIRGIREEIFEKT------SCIIAKFYADNPM------ILN------KFIACANNRTPFDSVLLAYTKRFVSNGMMKM----FNELLVLQHINPMDRFLLLSRNYAMWSSFEEAI--LFKNRQEVIKNQQNVRNSLNKIKTSADGDQAFNVDMIQEAMDKISLEDNVESSDVIDNLIQDQQT-RDRRRSLITSIQAWPKFNANGVSDDILTTLMMMILICCPDALQLNSESAVSQFQNQYCYILYRYINSKYPGQAHSKLGEGMEIVSKVRE 475

HSP 2 Score: 137.887 bits (346), Expect = 1.125e-30
Identity = 108/360 (30.00%), Postives = 173/360 (48.06%), Query Frame = 0

Query:  130 CPICSNSAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRKERILQRYGSKKSQPNQINGSMKLQMHAVMAGTFTVEEHQCLFGWYQKWHDFGASKSLDYFCDHVGVFQAILESSYEGKPMSNSAFRSMTKADEYVIVSYYFNEEEI-QNLHFDDRMTLIARNFAVLYGLLWGSF-STLDDPDAQMQTYFDFCLRNAANNPRYHS------LLDLWQNFVD-----NGKRVSPYHCGLIQRDSFPDSLKYRQYINDTE---KIGSVMASDNALDAILMIILNYICFYSTDFPD--QLREGEKIKTKQNNYLALLHRYTTT 471
            CP+C N +GKH YYGA+ C SCR FFRRS  N     F+C     C IDSKSWKSCKFCR+QKCL AGM+P +V + E+R +R  +R   K+++  +++  +     AV++  +TV+E   + G  ++  +  +     ++ D+  +    +  +    P  +S   + TK      +   FNE  + Q+++  DR  L++RN+A     +W SF   +   + Q        +RN+ N  +  +       +D+ Q  +D     +    S     LIQ     D  + R  I   +   K  +   SD+ L  ++M+IL  IC      PD  QL     +   QN Y  +L+RY  +
Sbjct:  115 CPVCGNPSGKHLYYGAQVCSSCRAFFRRSTINSAAEEFRCKADKKCGIDSKSWKSCKFCRFQKCLSAGMRPNWVMNDEERTQRNAKR---KRTRTKRVDNVVS---EAVLSHQWTVDEDLQIRGIREEIFEKTSCIIAKFYADNPMILNKFIACANNRTPF-DSVLLAYTKRFVSNGMMKMFNELLVLQHINPMDRFLLLSRNYA-----MWSSFEEAILFKNRQEVIKNQQNVRNSLNKIKTSADGDQAFNVDMIQEAMDKISLEDNVESSDVIDNLIQDQQTRD--RRRSLITSIQAWPKFNANGVSDDILTTLMMMIL--IC-----CPDALQLNSESAVSQFQNQYCYILYRYINS 453

[Close]

BLAST of retinoid x vs. nr
Match: gi|657600344|gb|AID52833.1| (nuclear receptor [Tigriopus japonicus])

HSP 1 Score: 143.665 bits (361), Expect = 3.371e-32
Identity = 108/392 (27.55%), Postives = 183/392 (46.68%), Query Frame = 0

Query:  512 LSESTLSPKTEDESVSLRLCQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMCKASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEE--RRVKREHKRAKVLKAKDVKRDKVLPISRGLDFEFTTEEELKVMQIRN-YAKTCKLNHMALTMAKDGGP--LTVLWDVIFNKQNVPLKFLETVENREKALFQGISMGLEEMTEIDVEDRQTLVQENGSAFFALIMSLYSIPNNFKKLMNDLTRTLEQMSRTNPNVRLTNVLDTLEVLKLSPGNHP--TYETFYGNVSQSNKTLSEAHRALVTKIQHAVGSFENNPPDEMIVCLVILNLVFRSHGAKLHNKAKVERVQNNFAFMLYRYLKSRFAQKAGSK-MAKALMLTTYTTE 895
            L +ST+ P   D +     C +C   AGKHNYYGG+ C SCRAFFRR+VQ++ Y  + C     C+I+ K+RRSC  CR++KCL +GM   W++ D E  RR  + HK AK   ++     KV+        E       ++  IR  + K   L   +L       P  +  L +  +      + F++  +         +    EE   +   DR+ L++ NG      +++ +      ++  + L   +EQ +++     L ++++ L  L ++    P   Y  FY +   S+K     +  L+ K++        +P DE+ + L  + + F      L  ++ VE +Q  +  ML+RYL  R+  KA +K +A  LM++TY  E
Sbjct:  177 LPKSTMPPSNWDNTK----CYICQEKAGKHNYYGGKACPSCRAFFRRAVQSKYYEIFFCNKGEKCEINLKTRRSCQFCRFKKCLASGMRVAWVLPDGERNRRFNKLHKSAKKNNSQIEGDLKVVAKKPKGPLEIQGVLPGEIDMIRGVHMKVDSLGAKSLREFILAQPEFMKKLANFSYFGGQPDMDFIQKFQLMCDRFAHFVLTTSEEFKMLSFGDRRQLIEVNGP-----LLNRFKCSVTIQETNSCLVNGIEQATKSGEFPYLNDIVEKLAQLNMT-DRKPILAYNQFYASPWASSKEAEGRYFNLMIKMKAWPRDNIASPVDEIQMTLAKMIIAFSPDFLNLEQRSVVEAIQMKYVSMLHRYLVFRYGAKAATKRLAAGLMMSTYARE 558

HSP 2 Score: 120.168 bits (300), Expect = 1.539e-24
Identity = 83/250 (33.20%), Postives = 121/250 (48.40%), Query Frame = 0

Query:  106 NSKPNPHDTIIVSAEFRPTQTLP-------KCPICSNSAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRKERILQRYGSKKSQPNQINGSMK---------LQMHAVMAGTFTVEEHQCLFGWYQKWHDFGASKSLDYFCDHVGVFQAILE--SSYEGKPMSN--SAFRSMTKADEYVIVSYYFNEEEIQNLHFDDRMTLIARNFAVL 335
            N +P      + S E  P  T+P       KC IC   AGKH YYG + C SCR FFRR+VQ++++ IF C     C I+ K+ +SC+FCR++KCL +GM+ A+V    +R  R  + + S K   +QI G +K         L++  V+ G     E   + G + K    GA KSL  F      F   L   S + G+P  +    F+ M     + +++     EE + L F DR  LI  N  +L
Sbjct:  161 NPEPQKSPGALDSEENLPKSTMPPSNWDNTKCYICQEKAGKHNYYGGKACPSCRAFFRRAVQSKYYEIFFCNKGEKCEINLKTRRSCQFCRFKKCLASGMRVAWVLPDGERNRRFNKLHKSAKKNNSQIEGDLKVVAKKPKGPLEIQGVLPG-----EIDMIRGVHMKVDSLGA-KSLREFILAQPEFMKKLANFSYFGGQPDMDFIQKFQLMCDRFAHFVLT---TSEEFKMLSFGDRRQLIEVNGPLL 401

[Close]

BLAST of retinoid x vs. nr
Match: gi|728054565|gb|AIY67762.1| (HR97a-like receptor 6 [Tigriopus japonicus])

HSP 1 Score: 138.658 bits (348), Expect = 7.807e-31
Identity = 116/403 (28.78%), Postives = 188/403 (46.65%), Query Frame = 0

Query:  510 STLSESTLSPKTEDESVSLRL-CQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMCKASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEERRVKREHKRAKVLKAKDVKRDKVLP---ISRGLDFEFTTEEELKVMQIRNYAKTCKLNHMALTMAKDGGPLTVLWDVI---FNKQNVPL----KFLETVENREKALFQGISMGLEEMTEIDVEDRQTLVQENGSAFFALIMSLYSI----PNNFKKLMNDLTRTLEQMSRTNPNVRLTNVLDTLEVLKLSPGNHPTYETFYGNVSQSNKTLS------EAHRALVTKIQHAVGSFENNPPDEMIVCLVILNLVFRSHGAKLHNKAKVERVQNNFAFMLYRYLKSRFAQKAGSKMAKALMLTT 891
            S +S   +S   E E++  +L C VCG  AGKH YYGGQVC SCRAFFRR+V  +SY  + C     C I+SKS +SC  CR++KCL++GM   W+ ++++     +  +AK       K   ++P   I R +  ++T EEE  V    N+A     + +    A+       +  V    F+ +N P     +F   + N E + F+       +M ++   D++ LV EN    F L   +  +       + +L  D  +      R + +    NV+  L    LS  +HP  +    N + S   LS          +L+T+IQ     F + P D ++  L+   ++F  +   L +  KV  +Q  F  ML RYLK++  ++A  K+ +A+   T
Sbjct:   84 SDVSFKQVSSSVEPEAIKTQLICLVCGNAAGKHCYYGGQVCVSCRAFFRRAVLGKSYSEFKCSKEEQCVINSKSWKSCRFCRFQKCLQSGMRIAWVTTEDKPSGPSKGSKAK------PKGKLIVPTSAIQRSIQLKWTLEEECYVRGFYNHAWENWCHVITDFYARHPVYFASIISVFLLDFSVENNPFMTKSEFYGQMVNMELS-FKRFWFTHPDMNDLCQADQEQLVNENNDLIFTLCRCVQYLNAQDVAKYSRLYRDRLK-----ERASQDESCQNVVAMLSNFTLS--DHPE-DNITPNTTTSLCLLSADDESKSLESSLMTEIQEWNRLFPHGPCDPIMQTLMGYLIIFDPNMKNLQDYKKVCDIQTKFLHMLQRYLKAKVPKQATKKIGQAVEFIT 471

HSP 2 Score: 127.487 bits (319), Expect = 3.200e-27
Identity = 107/406 (26.35%), Postives = 182/406 (44.83%), Query Frame = 0

Query:   86 DLSEFMDEQTIMDLLSQEFFNSKPNPHDT----IIVSAEFRPTQTLPKCPICSNSAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRKERILQRYGSKKSQPNQINGSMKLQMHAVMAGT---FTVEEHQCLFGWY----QKW----HDFGASKSLDYFCDHVGVFQAILESSYEGKP-MSNSAFRSMTKADEYVIVSYYFNEEEIQNLHFDDRMTLIARNFAVLYGLL-WGSFSTLDDPDAQMQTYFDFCLRNAANNPRYHSLLDLWQNFV------DNGKRVSPYHCGLIQRDSFPDSLKYRQYINDTEKIGSVMASDNALDAILMIILNYICFYSTDFPDQLREGEKIKTKQNNYLALLHRY 468
            DL  F+ E  ++    Q   +S+    D     +  S E    +T   C +C N+AGKH YYG + C+SCR FFRR+V  + +  FKC+    C I+SKSWKSC+FCR+QKCLQ+GM+ A+V ++++         G  K    +  G + +   A+       +T+EE   + G+Y    + W     DF A   + YF   + VF  +L+ S E  P M+ S F       E     ++F   ++ +L   D+  L+  N  +++ L     +    D     + Y D     A+ +    +++ +  NF       DN    +     L+  D    SL+        E   + +      D I+  ++ Y+  +  +  + L++ +K+   Q  +L +L RY
Sbjct:   58 DLESFLHESNVVSKSPQISDDSEMCKSDVSFKQVSSSVEPEAIKTQLICLVCGNAAGKHCYYGGQVCVSCRAFFRRAVLGKSYSEFKCSKEEQCVINSKSWKSCRFCRFQKCLQSGMRIAWVTTEDKPS-------GPSKGSKAKPKGKLIVPTSAIQRSIQLKWTLEEECYVRGFYNHAWENWCHVITDFYARHPV-YFASIISVF--LLDFSVENNPFMTKSEFYGQMVNMELSFKRFWFTHPDMNDLCQADQEQLVNENNDLIFTLCRCVQYLNAQDVAKYSRLYRDRLKERASQDESCQNVVAMLSNFTLSDHPEDNITPNTTTSLCLLSADDESKSLESSLMTEIQE--WNRLFPHGPCDPIMQTLMGYLIIFDPNMKN-LQDYKKVCDIQTKFLHMLQRY 450

[Close]

BLAST of retinoid x vs. nr
Match: gi|657600342|gb|AID52832.1| (nuclear receptor [Tigriopus japonicus])

HSP 1 Score: 135.191 bits (339), Expect = 3.342e-30
Identity = 115/386 (29.79%), Postives = 174/386 (45.08%), Query Frame = 0

Query:  529 RLCQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMC-KASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEERRVKREHKRAKVLKAKDVKRDKVLPISRGLDFEFTTEEE-------LKVMQ---IRNYAKTCK-----LNHMALTMAKDGGPLTVLWDVIFNKQNVPLKFLETVENREKALFQGISMGLEEMTEIDVEDRQTLVQENGSAFFAL--IMSLYSIPNNFKKLMNDLTRTLEQMSRTNPNVRLTNVLDTLEVLKLSPGN-HPTYETFYGNVSQSNKTLSEAHRALVTKIQHAVGSFENNPPDEMIVCLVILNLVFRSHGAKLHNKAKVERVQNNFAFMLYRYLKSRFAQKAGSKMAKALMLTTYTTE 895
            R+CQVCG  AG+HNYYGGQ C  CRAFFRR VQ       +C   S  C ++  +RR C  CR+ +CL  GM P W++SD ER  +R  K A    A  +   K  P+S  +     T  +       +K+M    +RN    C      +  MA+ M+  GG      D  F ++     F    +N    +FQ +S  L E   + V+D+Q LV+ NG    AL   +SL+     F          LE+  ++     L +    L+   +S       Y   + +   ++    E H  LV K+Q        +  D++ + L+ L ++F S    L     VE+ Q  F  +L +Y+K R+  +AG ++   LML +Y  E
Sbjct:   45 RICQVCGDEAGQHNYYGGQSCSGCRAFFRRIVQRDLQANLICVDNSNECVVNKSTRRRCQFCRFHRCLAIGMRPGWVLSDHERE-RRYRKTANGSHAVSIATQKS-PVSNRISLLVLTTNDNTHITAHMKMMDAHFVRNMDVVCAQKQDFIRKMAV-MSYFGGQS----DFEFYEE-----FYSLCDN---FVFQVMSSVL-EFRSLPVQDQQELVRVNGQYMVALKYAVSLHETDWCFVYF-------LERALKSGKFPYLNDFAQELDAFGMSEHKPRLMYSQVFSSPWAASAADEERHLFLVNKMQSWPRKDAQDRVDDVQMNLLKLIILFSSEFVNLQRPDIVEQTQMKFIGLLQKYMKFRYGPEAGVRLGNGLMLLSYAKE 407

HSP 2 Score: 86.2705 bits (212), Expect = 5.032e-14
Identity = 33/84 (39.29%), Postives = 50/84 (59.52%), Query Frame = 0

Query:  130 CPICSNSAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTGSGN-CTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRKER 212
            C +C + AG+H YYG ++C  CR FFRR VQ        C  + N C ++  + + C+FCR+ +CL  GM+P +V S  +R+ R
Sbjct:   47 CQVCGDEAGQHNYYGGQSCSGCRAFFRRIVQRDLQANLICVDNSNECVVNKSTRRRCQFCRFHRCLAIGMRPGWVLSDHERERR 130

[Close]

BLAST of retinoid x vs. nr
Match: gi|1325306415|ref|XP_023334818.1| (oxysterols receptor LXR-alpha-like [Eurytemora affinis])

HSP 1 Score: 120.168 bits (300), Expect = 9.642e-27
Identity = 60/161 (37.27%), Postives = 96/161 (59.63%), Query Frame = 0

Query:  520 KTEDESVSLRLCQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMCKASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEERRVKREHKRAKVLKAKDVKRDKVL---PISRGLDFEFTTEEEL----KVMQIRNYAKTCKLNHMALTMAKD 673
            K E++    R C+VCG  AG+H+YYGGQVC SCRAFFRRSV + +   Y C  +G C+++SK+R+ C  CRY  C +AGM   W+++D E+++K    +    K   +  D+V     +S      F +E EL    ++++I ++ +T K+N M  T+ ++
Sbjct:   33 KDENDDDIFRACKVCGEEAGRHSYYGGQVCASCRAFFRRSVNSGANKAYFCVKNGNCEVNSKTRKQCQYCRYRLCEDAGMKTSWVLTDTEKKLKSSEGKEGKQKRNSIDYDEVSNPPSLSGESSSIFISETELVLINELVEISDFWETSKVNDMDTTLIRE 193

HSP 2 Score: 92.8189 bits (229), Expect = 2.285e-17
Identity = 36/81 (44.44%), Postives = 55/81 (67.90%), Query Frame = 0

Query:  130 CPICSNSAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRK 210
            C +C   AG+H+YYG + C SCR FFRRSV +  +  + C  +GNC ++SK+ K C++CRY+ C  AGMK ++V +  ++K
Sbjct:   44 CKVCGEEAGRHSYYGGQVCASCRAFFRRSVNSGANKAYFCVKNGNCEVNSKTRKQCQYCRYRLCEDAGMKTSWVLTDTEKK 124

[Close]

BLAST of retinoid x vs. nr
Match: gi|1325265241|ref|XP_023336689.1| (oxysterols receptor LXR-alpha-like [Eurytemora affinis])

HSP 1 Score: 119.398 bits (298), Expect = 5.099e-24
Identity = 53/92 (57.61%), Postives = 67/92 (72.83%), Query Frame = 0

Query:  530 LCQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMC-KASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEERRVKREHKRAK 620
            +CQVCG  AGKH+YYGGQVC SCRAFFRRSVQ++ Y  + C   S +C I+  +R++C  CRY KCL  GM P WI+S+EE R++R H R K
Sbjct:  183 VCQVCGEKAGKHSYYGGQVCPSCRAFFRRSVQSRCYTGFRCINRSESCPINLLTRKNCQYCRYHKCLSCGMRPSWILSEEE-RIRRFHGRTK 273

HSP 2 Score: 100.523 bits (249), Expect = 4.785e-18
Identity = 43/94 (45.74%), Postives = 62/94 (65.96%), Query Frame = 0

Query:  128 PKCPICSNSAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTG-SGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRKERILQRYGSK 220
            P C +C   AGKH+YYG + C SCR FFRRSVQ++ +  F+C   S +C I+  + K+C++CRY KCL  GM+P+++ S+E+R  R   R   K
Sbjct:  182 PVCQVCGEKAGKHSYYGGQVCPSCRAFFRRSVQSRCYTGFRCINRSESCPINLLTRKNCQYCRYHKCLSCGMRPSWILSEEERIRRFHGRTKGK 275

[Close]

BLAST of retinoid x vs. nr
Match: gi|657600356|gb|AID52839.1| (nuclear receptor [Tigriopus japonicus])

HSP 1 Score: 111.694 bits (278), Expect = 1.492e-21
Identity = 54/132 (40.91%), Postives = 76/132 (57.58%), Query Frame = 0

Query:  499 DPCSGEDVQAWSTLSESTLSPKTEDESVS-LRLCQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMCKASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEERRVKREHKRAKVLKAKDVKR 629
            DP  G   Q    +  S    K E+  +S    C+VCG  A +H +YG   C SCRAFFRRS+QN+++  Y C+  G C+I  KSR++C  CRYE+CL AGM P W++S+EER  +    R K  +    ++
Sbjct:   55 DPGEGPSEQNDVRMHSSGKKCKKENPLISDTEKCRVCGEPAARHVHYGSVTCFSCRAFFRRSIQNKAWNNYSCRRQGQCEIMLKSRKNCQKCRYEECLSAGMKPTWVLSEEERSRRFRKTREKKARQNSTRK 186

HSP 2 Score: 101.293 bits (251), Expect = 3.162e-18
Identity = 53/137 (38.69%), Postives = 76/137 (55.47%), Query Frame = 0

Query:  129 KCPICSNSAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRKERILQ-----------RYGSKKSQP----------NQINGSMKL--QMHAVMAGT 242
            KC +C   A +H +YG+ TC SCR FFRRS+QN+    + C   G C I  KS K+C+ CRY++CL AGMKP +V S+E+R  R  +           R  ++ S+P          +QI GS KL  + H+ + G+
Sbjct:   87 KCRVCGEPAARHVHYGSVTCFSCRAFFRRSIQNKAWNNYSCRRQGQCEIMLKSRKNCQKCRYEECLSAGMKPTWVLSEEERSRRFRKTREKKARQNSTRKSNEGSEPETNNGQGNEDDQIPGSSKLDTRTHSTLHGS 223

The following BLAST results are available for this feature:

BLAST of retinoid x vs. L. salmonis genes
BLAST of retinoid x vs. SwissProt
BLAST of retinoid x vs. nr

BLAST of retinoid x vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 24


Match Name	E-value	Identity	Description
EMLSAG00000010267	6.462e-35	29.38	supercontig:LSalAtl2s:LSalAtl2s680:110406:112508:1...	[more]
EMLSAG00000011907	2.849e-30	27.85	supercontig:LSalAtl2s:LSalAtl2s83:639505:641027:-1...	[more]
EMLSAG00000012651	8.282e-22	41.82	supercontig:LSalAtl2s:LSalAtl2s959:3535:5114:-1 ge...	[more]
EMLSAG00000004174	5.003e-17	41.94	supercontig:LSalAtl2s:LSalAtl2s220:369739:371271:-...	[more]
EMLSAG00000008261	3.285e-15	41.12	supercontig:LSalAtl2s:LSalAtl2s49:858199:860758:1 ...	[more]
EMLSAG00000008902	8.617e-15	40.96	supercontig:LSalAtl2s:LSalAtl2s554:572309:581835:1...	[more]
EMLSAG00000005090	6.715e-14	35.45	supercontig:LSalAtl2s:LSalAtl2s269:306853:308464:-...	[more]
EMLSAG00000008543	1.634e-13	45.24	supercontig:LSalAtl2s:LSalAtl2s527:163002:172818:1...	[more]
EMLSAG00000007361	1.745e-13	33.04	supercontig:LSalAtl2s:LSalAtl2s418:374353:376789:1...	[more]
EMLSAG00000008071	3.085e-13	33.61	supercontig:LSalAtl2s:LSalAtl2s47:304551:317770:1 ...	[more]

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BLAST of retinoid x vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|6016234\|sp\|P79926.1\|HNF4B_XENLA	2.374e-15	34.39	RecName: Full=Hepatocyte nuclear factor 4-beta; Sh...	[more]
gi\|205371750\|sp\|P49880.2\|ECR_AEDAE	2.885e-15	31.49	RecName: Full=Ecdysone receptor; AltName: Full=20-...	[more]
gi\|160221327\|sp\|P79387.3\|STF1_PIG	6.164e-15	37.96	RecName: Full=Steroidogenic factor 1; Short=SF-1; ...	[more]
gi\|416584\|sp\|Q04752.1\|STF1_BOVIN	7.229e-15	37.96	RecName: Full=Steroidogenic factor 1; Short=SF-1; ...	[more]
gi\|1703164\|sp\|P50569.1\|STF1_RAT	7.267e-15	37.96	RecName: Full=Steroidogenic factor 1; Short=SF-1; ...	[more]
gi\|341942103\|sp\|P33242.3\|STF1_MOUSE	7.331e-15	37.96	RecName: Full=Steroidogenic factor 1; Short=SF-1; ...	[more]
gi\|49036491\|sp\|Q95L87.1\|STF1_MACEU	7.434e-15	44.58	RecName: Full=Steroidogenic factor 1; Short=SF-1; ...	[more]
gi\|3121738\|sp\|Q13285.2\|STF1_HUMAN	7.829e-15	37.96	RecName: Full=Steroidogenic factor 1; Short=SF-1; ...	[more]
gi\|44889025\|sp\|P49867.2\|FTZF1_BOMMO	8.041e-15	36.84	RecName: Full=Nuclear hormone receptor FTZ-F1; Alt...	[more]
gi\|12230057\|sp\|Q9YH33.1\|ESR1_ORENI	1.036e-14	39.81	RecName: Full=Estrogen receptor; Short=ER; AltName...	[more]

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BLAST of retinoid x vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|728054567\|gb\|AIY67763.1\|	4.864e-120	47.47	HR97a-like receptor 4 [Tigriopus japonicus]	[more]
gi\|657600350\|gb\|AID52836.1\|	5.560e-40	30.79	nuclear receptor [Tigriopus japonicus]	[more]
gi\|657600348\|gb\|AID52835.1\|	2.425e-35	29.31	nuclear receptor [Tigriopus japonicus]	[more]
gi\|657600346\|gb\|AID52834.1\|	5.854e-33	28.83	nuclear receptor [Tigriopus japonicus]	[more]
gi\|657600344\|gb\|AID52833.1\|	3.371e-32	27.55	nuclear receptor [Tigriopus japonicus]	[more]
gi\|728054565\|gb\|AIY67762.1\|	7.807e-31	28.78	HR97a-like receptor 6 [Tigriopus japonicus]	[more]
gi\|657600342\|gb\|AID52832.1\|	3.342e-30	29.79	nuclear receptor [Tigriopus japonicus]	[more]
gi\|1325306415\|ref\|XP_023334818.1\|	9.642e-27	37.27	oxysterols receptor LXR-alpha-like [Eurytemora aff...	[more]
gi\|1325265241\|ref\|XP_023336689.1\|	5.099e-24	57.61	oxysterols receptor LXR-alpha-like [Eurytemora aff...	[more]
gi\|657600356\|gb\|AID52839.1\|	1.492e-21	40.91	nuclear receptor [Tigriopus japonicus]	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold42_size484952	supercontig	scaffold42_size484952:476100..483829 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	F:binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold42_size484952-snap-gene-3.25-mRNA-1	maker-scaffold42_size484952-snap-gene-3.25-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold42_size484952:476100..483829+

gene from alignment at scaffold42_size484952:476100..483829+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold42_size484952-snap-gene-3.25 ID=maker-scaffold42_size484952-snap-gene-3.25|Name=retinoid x|organism=Tigriopus kingsejongensis|type=gene|length=7730bp|location=Sequence derived from alignment at scaffold42_size484952:476100..483829+ (Tigriopus kingsejongensis)
ATGTCAGGTTCGGCCGTGACCGTGACCCCGGCGGTGTCTGCGACCGCTGG
AGCCATGGGCGTAACCGTGTTTGTGTCGAGACCATTAGCCATGAACTCGA
CTCCCCCCACGGCTTGCATCAAGACCCCCAGTGGGGTAACATCCCCCACA
CTGGAATCCGGGGGCGGCGAGAGAAGTCTTTTGTTATTGCCATCATCAGA
TTCGTTCTCAGGCAAACTTAATGGCATCCCTCCATTGGGCTCCAAAGGCC
CATAACTCCCACTACCCCTGCCACCCTCCATACTTGGACGCCTTTCGGTG
GTCACGAGACGGCCCCGGGTCCACGCCCAAACTCGCTCACTGTCCCACGG
ATGAGGTGAATTAACATAAAACTGGATAATAGTGGCGATGATCTGTGCTG
AAAATAGCCCAGCACAGCGTACTGTGGACACTTCTGCTGTATGGCTGCCT
TCCAAAGGAGCCACCAAAGAAGGTGACCGAGATGTGGAAGTAAAAAAGAT
AGGGCTCACTTTTTCACTCATGTGATTGCGTCAGGCTGGAAAATTCTGAA
GGGAATCCATACTTTTTTGACGTACTACGTAGTTGCGGGTTTTAAGAGCT
GATATATTAGTGTGTGTTATCGTTTATTTTACTTGGCACATGTGAATTCA
CTTAGATTGAAATACTAGTAAGGTGAACTGTGTAATATAAATCTAAAAGA
TATACATATACAATAATAATGGTATGTAAATGTACACACAGATACAGTGT
CAGATGGGATCTGTCATGATGCAAAGACTAGGACCTTTTATATCACATGG
AGTGTATGCTGTAGACAAGTTTAGATGGGGGCGGTCTTGGCTAGTATGTT
TGTCAACCGATGTCCCACATGAAACAGATCTATCTGTAAGTAGCCTCATT
AATAGCCAAAATGTAAAAATGTAACCTGTCCGTTAGGAAAAACACTTAAA
ATGTTGCTTGGTCTGTAAAATTTGGGGAAAATTTCCAAACCTAGGAACGC
TATTTGAAAACGAGAAAAAAATCCTGACAAATTTCAATATTTTTTTGAAA
AAAGTAATCGAGGATGAAACGATTTTTTATAACAATGTGAATAAAGGATA
AGAGCTACCCATTTCAAAGCAAGTTAACACTGCCTGACATTTGATTCGGC
TTTTTCAAACAAATGTTTTGCCGTTTTTAAGAACATTGATGGTAAAATTG
CCTTTTGGCTTGGGAGAAGTAGTTTAAAAATAAAACAAAATGTATTTGGG
CTGTGAAGTTTCTACCCTTTTCTGCAGTCTACTCTTTAAAAAACTCATCT
TGCTAATAAAATTTAGAGTTGCAGGCTGGATATTTTGGCACGATAAGAGA
ACCTTCCCTTGTCTTCTGCATGGGACAAACATCTTCATACATGCCTACAT
TTCTTTATAACATTCTTATAAAGATTTACATAGGTCCGAGCATGGCTTTG
AATGCTTTTATCCCATTTTACCCTTTGAAATTCATGCTTTATTTGGTCCT
CCCACGGACTAGATATAGCTTTAGGACGCGCTACAAAGATGTCACCAAAC
ATATACAATTACTTTCGTTCGCTAAGTGTTGACTCCCGGGCATGAACTTT
CTTAATATGTAGGAAAACACATTTACACACTCTCATCTGAATCGTATATT
CGCTAATTGCAAAGCGGGTTTTTCTTAGCACAATCTCAGCATTGCCGGCC
GAATCTCGCCACTCTGCTTTGGGCCATCTTGGCTGTTCAGCGTTGGACCA
ATTGGCAGGAATCAAGAGTTGGGCGCAGTGGGGCCATGATCAGTGAGGCT
TTCCTTTCCTCCCTTTCCGAAGAATTTGCGCTCAGCGTCAAGTCCCCTTT
TCGGTCACACAACCTCGGAGAGAGATTGGTGTCAGTCTCCGATGTCTTCT
GTAACCCACCATGCTCTTTTCATCGGGTCGGCATAGTATGGATTTGTTAT
CTTGTGAGCGACCAGTTGTGTTTTTGGGTAGATATGAATAGAATGGAATG
TCTCTCCAGCCATTTGACCACTGCGAAAACAAGATTTCTGTGGCTCGATT
ATGGGGCATTTGTGTCTCGTATATGTGCAAAACACGTTAGTAATTAATAG
GCATGCTGGATTTTAATCTTACTTTGAATTCCTTATCTTTCCGTACATAC
GTAACTGTCAAGATTCGCTTGGAAGCATATGTTGCTGAATCTACTAGTGT
ATTTACTTGCCATGAACATCGCAGTAATCAAGCTCGAACCAAACTAGTTC
CGAATCCTGTGAAGGTGAAGTGATATCTGCAACTGGGATGAGGTAGGCAA
CTATAATCTCTTGCTGTTTTGTGTACGGTTTAACAATGTATGCTTTAAAT
TTGAAACCGACGATTTCTTGTTGCGCTTGGACGTGTCACGATATTTTTCT
ACCAACTCAGCCCTTGTAAGTTTAAAAATAGAGGGCATTACGATAACGTT
AAACTGCGTGGTTTTGGTAAAATTCAACGGAGAGGGAATAAGTCAAAGGG
TGCAACTGTTTCAGAATTGATATTGGGCAGCGTTCGCAGACCGGGAAATA
ATCGTCCACCATTAGAGTGTGCAGTAGTGCATATATGACAGTTATGGGTC
AGAGTATACATGGATAATCAATCTCAGAGCTCACGCTCTTGACCACTTAG
CTCTCTGTCCCATGAAGAGGAGCTCGAATGGTGTTTGTAGGCCAGTGCAA
GGCTCAAACCTCACTCATTTCCCTCCGTTAGTTCGTAGCAAAGCCTCATT
TGAGCCAAGTGGAGACAAGATGGCAGACGCAATTGATTTTGATTTGATGG
CCCATTTGGGAGAGGAAATCACCCGTGACAACCTTCCCATGGGGGACTCT
GGTCCGGATTTGTCCGAGTTTATGGATGAGCAGACAATCATGGACCTGCT
ATCCCAAGAGTTCTTCAATTCCAAGCCGAACCCACACGACACTATCATCG
TCAGTGCTGAATTCCGTCCAACTCAGACGCTTCCCAAGTGCCCCATCTGC
TCAAATTCCGCCGGAAAGCACACTTATTATGGAGCCAGAACTTGCTTGAG
CTGTCGTGGGTTCTTCCGGAGATCCGTTCAAAACCAGCATCATCCCATTT
TCAAGTGCACAGGAAGTGGGAATTGCACTATCGATTCCAAATCTTGGAAA
AGCTGCAAGTTCTGCCGATACCAGAAGTGCCTTCAGGCCGGAATGAAGCC
CGCTTATGTCCAATCGCAAGAACAGCGGAAGGAGCGGATTCTTCAGCGCT
ACGGGTCCAAGAAGTCTCAGCCTAACCAAATCAACGGGTCCATGAAGCTC
CAGATGCATGCGGTCATGGCAGGAACTTTTACCGTGGAAGAGCACCAGTG
CCTTTTCGGCTGGTATCAGAAGTGGCACGATTTCGGGGCTTCGAAGTCCC
TGGACTACTTTTGTGATCACGTTGGAGTCTTTCAAGCCATTCTAGAGAGT
AGTTATGAGGGCAAACCGATGTCAAATTCGGCCTTCAGATCCATGACCAA
GGCCGATGAATATGTCATTGTGTCCTACTATTTCAACGAGGAAGAGATCC
AAAACCTCCATTTCGACGATCGAATGACATTGATCGCCAGAAATTTTGCC
GTATTGTATGGCTTACTTTGGGGCTCTTTTTCCACCTTGGACGATCCGGA
CGCCCAAATGCAGACCTATTTTGACTTCTGTCTAAGGAATGCCGCGAACA
ATCCGCGATATCACTCCTTGTTGGATTTGTGGCAAAACTTTGTTGACAAC
GGGAAGAGAGTCAGTCCCTATCATTGTGGGCTCATTCAAAGAGACTCATT
TCCAGACAGTTTGAAATATCGCCAATACATTAACGACACAGAGAAGATCG
GGTCGGTGATGGCCAGCGACAATGCTTTGGATGCAATCCTCATGATTATT
CTCAATTACATATGCTTTTACTCCACGGACTTTCCTGACCAGCTTCGAGA
AGGCGAGAAGATCAAGACCAAGCAAAACAACTATCTGGCTCTCTTGCATA
GATATGTTAAGTACAAATATCCAAAAACTAGTAGTGCCAAACTTCACGAG
GCCATGATGATAACCGTCAAAGCCAAAAGTGTCCACCAGTCACTGGACTT
TCTGGCTTCATGACCATTGTCCAAATTAAAACTTGTGTGGAAAACAAAAA
ATGAAAGTCAATTTCCAATTAATATCAGCGAAAGGACTGCTAATACCTAA
GTAAAATCATTAGCAGAGAACTTACATGACCCTCAAAACTCGAGCCCAAC
CATCTCATGGCACGCCCAGATCTCAAATCTGGTGTCACAACCCAAGCCAA
GGATTGGCCTCCGCCAGAAATTCTGACTATGTAAATCTGCTTAATGCTGA
TGGTATGTAAATGGCCAAAATCCGATTGGAGATTCTTATGCTAGGTGAAA
AACGAACCCGACAGAAAAATGGAAAAGACCAGGGCGTGCATTCAGCTTGT
GTTTAATAACTTTATGATAACTATTGCCCGCAGAGGCTGAGAGATGAGAT
GAATTTGCGAAACCCTTGCAAGTACATGCATTGAAGGCTGAACAAAATAA
ATACGTAGTAAAAGTTTGACACATTTCAAAAAGATACCCCAAAAGGTGGC
GCTTTTAAATAGTATTTGTCATTTTCCTGGAACAATCAAAATTACACGGC
AAGATACGTGGGAAGACCTTCGCAGCTCCTCAAACAGGTGCTTTATCTCA
GTACCTCAAATCCTTTCTTCAAAAGTCTATTCGGTTCCGGTAGGGGTTTA
GCAGTGGTCCGATCAGGAATGTCCTCAATCGAATTTACTTCGAATCGAGG
AGAGGTGTTACCAAATTACACTGTGGTCAAGAGATCCCATTCCGTTTCCC
ATAACCTTGCCAACAGCCGCCTTCATTCATTAACGAGTCCAATTTTTCTT
ACATAATGATAAGTCATTTGACTTTTCTTCAATCGCGAAAATCAAGGCCC
TAATTGTACCTTAAACGAAACGACATTATAGATTATTTTTAACGTTTTGC
CAATTTCTTTTCCAAAAAAACATAAAGTTTTAAACCTTTTTGGCCTGACA
AAACAAACTTTTTCATTCCGTGGTCTGTTTGTTTGTTTGGAAGGCCCTAG
GAATGATCAGTACAGTACAATCACTTCCCAGTTAGAAATCTCCGAAGAGA
CATATTCGACCTTAGGACTTTCTGAAAAATTTATTCTAATCCTTGGACCG
AGTTCAAGATAGTCATGGTTTGACCCAGAAGGGACAGGACTACCTTGGGA
TTCCAGTCCAGGGATATATTGGTGCCGTCGTGAATACTAGCCCACAGACG
GCAGGTTGCAGGGCAAAATGTCGCTAGATGACAGGGCGATTCCTCCGTCT
TTCCGCATAAGCGACAACTTTGGCCAGCCACTTGCCCTGACATTCCGTGG
TCTATTCATCATGTTTAAACGGATATGGTACGTATGTCAATAACGTCTGG
CCGGATTAAGCGTCAGTGCTAGTTATTATACATATATGTATAAGTACGGT
ATATATACATATGTATAAGCGCGATTTGAGTCGTTGTAATATGGACGTCG
TCACCAGGTAAATGCGAATAGGAAAATCGTTACAAGACGTCACAAAAACT
CGGTTAAAACGCATCGTGGCCTTAGCCAAACACCCAATCTTGTCAACAAA
TGGGTTCATATTTCTTCGAGGCAACTCATTTGCACGTTTAACAATCCTTC
CTCGACATTTTCAAATGGAGCTAGTTCTTAACAGTGTGGGCAATAAACGA
ATTTCTGACACATGCTTCAGAACAGCCGGAGTTGGCCCAAGTTAGCGTAC
TGCCCCGTCAGAACACGTAAGAGATGTTTGCAGAGGGAAAAAACCTGTTA
CAAAAGCAGGCCCAAGCAGAAGCTTATCTAGCGCTGAACGCACGCAGACA
CCTTGGATGAAGCTGCGGAGAATTTGAGGAAGGATCCAAACGAAAAACAA
CACAAGACTCAGGTATGGAACTAGAGTTGGACAACTTCAGCCCTCTTAGC
TTTATTGGGACCAACCAAGAATTAGCATTCGATGGGGAAAACATCTCTTT
AGTTTCATGATAAAATGATCTGACTCCATCTCCTGGTGATTTGAGCAAGC
TCATTCTCAAGGACTAAACCGCCAATCGCTGAGAAGGCCAAACCAATACA
AAAATATTAAAATATCAAAAGTAGGCCTGGCTGTTAATGAATTGAATGAG
TTTCGGGCACTCTCAAACCTGATGGAACATGTCCAGAGTTCCGAATTGGC
TTCCCCCGACCATCAATCATTCAATGAAACTGCCCTGATTGTTCTCATCT
TTTCGCCTTGGACTTTCAGGAACCAAGACCAATGAAAGTTTGAATTGAAC
ACACGCGTCAAGGCCTGGAGAAGCAGAAATTGGCATCAAATGTTGTTGAA
TACTCTAATTACGATGTTGCATTAAAGTTTAATATTTACTTGATTTCAGA
CGACGACAATGATCAACTTTGATACCTCACCGTTGGAGGCTCTGATAACA
GATCAGTTCATCCACGACATTCTCAGTGAAGATGTGATTGATCCCTGTTC
GGGGGAAGATGTCCAAGCCTGGTCAACCCTATCAGAATCAACCTTGTCGC
CCAAAACCGAAGATGAATCGGTATCATTAAGACTCTGTCAAGTCTGTGGA
TTGCACGCAGGAAAGCACAATTATTACGGCGGTCAAGTGTGCGAGAGTTG
TCGGGCATTCTTTCGCCGCTCGGTTCAAAACCAATCATATCCAACATATA
TGTGCAAAGCATCTGGTGCTTGTGATATCGATTCGAAATCAAGACGAAGT
TGTGCTTGCTGTCGTTACGAGAAGTGCCTTGAAGCCGGAATGAATCCCAA
GTGGATCATATCCGATGAAGAGCGACGAGTCAAACGTGAACACAAACGGG
CCAAGGTTTTAAAAGCCAAGGATGTAAAGCGTGACAAAGTTTTGCCAATC
AGTCGGGGGCTGGATTTCGAATTCACAACAGAGGAAGAGCTGAAAGTGAT
GCAGATCAGGAACTACGCCAAAACTTGCAAGCTGAATCATATGGCCCTTA
CCATGGCCAAGGATGGAGGTCCTTTGACCGTCCTCTGGGACGTCATTTTC
AATAAGCAAAACGTGCCACTGAAATTTTTGGAAACGGTCGAGAATCGGGA
GAAGGCTTTGTTTCAAGGAATTTCAATGGGTCTGGAAGAAATGACCGAGA
TAGACGTGGAAGACCGGCAAACACTCGTACAGGAAAATGGCTCCGCTTTC
TTCGCCCTCATCATGTCTTTGTACTCTATACCAAATAATTTCAAAAAGTT
AATGAACGATCTCACTCGCACCTTGGAGCAAATGAGTCGGACCAATCCGA
ATGTTAGACTCACCAACGTCTTGGACACTCTGGAGGTGCTCAAGCTCAGC
CCCGGCAACCACCCAACCTATGAAACCTTCTATGGCAATGTCTCTCAATC
CAACAAGACTTTGTCGGAAGCTCATCGCGCTTTAGTGACCAAGATACAGC
ACGCCGTTGGATCTTTTGAAAACAATCCTCCCGATGAAATGATTGTCTGC
CTGGTGATCTTGAATCTGGTCTTTAGAAGTCACGGAGCCAAGTTACATAA
CAAGGCCAAGGTGGAAAGGGTGCAGAACAACTTCGCCTTCATGCTTTATA
GATACCTCAAATCGAGATTCGCTCAGAAAGCCGGTTCGAAAATGGCCAAA
GCTCTCATGCTCACCACATATACAACCGAG

Synonyms

The feature 'retinoid x' has the following synonyms


Synonym
Tk06368

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