hypothetical protein, maker-scaffold82_size396747-snap-gene-2.41 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000005911 (supercontig:LSalAtl2s:LSalAtl2s31:1336906:1338922:-1 gene:EMLSAG00000005911 transcript:EMLSAT00000005911 description:"maker-LSalAtl2s31-augustus-gene-12.7") HSP 1 Score: 58.5362 bits (140), Expect = 8.374e-11 Identity = 30/82 (36.59%), Postives = 45/82 (54.88%), Query Frame = 0 Query: 238 AKAQSEITQDVCDCQCNNYTFK-FDNTLHGNCLQPYKGALWCYVKDFGQST--CIDRLESSRVSGLFWSFQACGTPKYQDCL 316 A A + + + C CQC++ TF+ +N ++GNC ++GA WCY+ D C D S R G WSF +C TP + C+ Sbjct: 28 AAAPASTSINDCFCQCSSLTFRDRNNRVNGNCRTTFQGAQWCYITDEAARNGDCPDAQPSRRQPGKQWSFFSCATPTVRQCV 109
BLAST of hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000000858 (supercontig:LSalAtl2s:LSalAtl2s1146:143094:143555:-1 gene:EMLSAG00000000858 transcript:EMLSAT00000000858 description:"maker-LSalAtl2s1146-augustus-gene-0.4") HSP 1 Score: 57.7658 bits (138), Expect = 1.169e-10 Identity = 29/63 (46.03%), Postives = 34/63 (53.97%), Query Frame = 0 Query: 249 CDCQCNNYTFK-FDNTLHGNCLQPYKGALWCYVKDFGQSTCIDRLESSRVSGLFWSFQACGTP 310 C+CQC + F+ +HGNC GA WCYVK S C D S R SG +WS AC TP Sbjct: 38 CNCQCISLQFRDSKGKIHGNCKSTLNGAQWCYVKYDKYSPCPDLGRSQRFSGRYWSNHACATP 100
BLAST of hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000000311 (supercontig:LSalAtl2s:LSalAtl2s1046:206967:207933:1 gene:EMLSAG00000000311 transcript:EMLSAT00000000311 description:"maker-LSalAtl2s1046-augustus-gene-1.15") HSP 1 Score: 55.0694 bits (131), Expect = 1.743e-9 Identity = 29/63 (46.03%), Postives = 34/63 (53.97%), Query Frame = 0 Query: 249 CDCQCNNYTFK-FDNTLHGNCLQPYKGALWCYVKDFGQSTCIDRLESSRVSGLFWSFQACGTP 310 C+CQ + TF+ T+HGNC GA WCYVK S C D S R G +WS AC TP Sbjct: 58 CNCQXISLTFRDSRGTIHGNCKSMINGAQWCYVKYDRFSPCPDLRASQRFRGRYWSNHACATP 120
BLAST of hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000001837 (supercontig:LSalAtl2s:LSalAtl2s1318:72145:72812:1 gene:EMLSAG00000001837 transcript:EMLSAT00000001837 description:"maker-LSalAtl2s1318-augustus-gene-0.12") HSP 1 Score: 53.9138 bits (128), Expect = 2.640e-9 Identity = 28/63 (44.44%), Postives = 34/63 (53.97%), Query Frame = 0 Query: 249 CDCQCNNYTFK-FDNTLHGNCLQPYKGALWCYVKDFGQSTCIDRLESSRVSGLFWSFQACGTP 310 C+CQC + F+ T +GNC GA WCYVK S C D S R +G +WS AC TP Sbjct: 38 CNCQCMSLKFRDSRGTTYGNCESTINGAQWCYVKYDRFSPCPDLQSSRRFNGRYWSNHACATP 100
BLAST of hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000001327 (supercontig:LSalAtl2s:LSalAtl2s1223:219743:221280:1 gene:EMLSAG00000001327 transcript:EMLSAT00000001327 description:"maker-LSalAtl2s1223-augustus-gene-2.67") HSP 1 Score: 52.7582 bits (125), Expect = 5.826e-9 Identity = 25/71 (35.21%), Postives = 39/71 (54.93%), Query Frame = 0 Query: 249 CDCQCNNYTFK-FDNTLHGNCLQPYKGALWCYVKDFGQST--CIDRLESSRVSGLFWSFQACGTPKYQDCL 316 C CQC++ +F+ +N ++GNC + G WCY+ D C D S+R G WS+ +C TP + C+ Sbjct: 21 CFCQCSSLSFRDKNNRVNGNCRTTFNGGQWCYITDEAARNGDCPDSNPSTRFPGKKWSYFSCATPSTRQCV 91
BLAST of hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000002406 (supercontig:LSalAtl2s:LSalAtl2s145:1581187:1602244:-1 gene:EMLSAG00000002406 transcript:EMLSAT00000002406 description:"maker-LSalAtl2s145-augustus-gene-16.13") HSP 1 Score: 52.373 bits (124), Expect = 1.228e-8 Identity = 28/79 (35.44%), Postives = 37/79 (46.84%), Query Frame = 0 Query: 233 KNASLAKAQSEITQDVCDCQCNNYTF-KFDNTLHGNCLQPYKGALWCYVKDFGQSTCIDRLESSRVSGLFWSFQACGTP 310 + + L S + C CQC + +HGNC GALWCYVK S C D ++S +WS+ AC TP Sbjct: 39 RKSKLYHKDSRGSHRNCLCQCIPLQYVDRKGIMHGNCTSTNDGALWCYVKYQKSSPCGDLVKSDIFQDRYWSYHACTTP 117
BLAST of hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000000366 (supercontig:LSalAtl2s:LSalAtl2s1053:57010:58418:-1 gene:EMLSAG00000000366 transcript:EMLSAT00000000366 description:"snap-LSalAtl2s1053-processed-gene-0.45") HSP 1 Score: 51.2174 bits (121), Expect = 2.670e-8 Identity = 30/78 (38.46%), Postives = 42/78 (53.85%), Query Frame = 0 Query: 245 TQDVCDCQCNNYTFKFD-NTLHGNCLQPYKGALWCYVKDFGQSTCIDRLESSRVSGLFWSFQACGT-PKYQ-DCLGVI 319 +Q C CQC +F + GNC + GA WCYV++ G S+C S+R G ++S AC T P Y +CLG + Sbjct: 29 SQADCQCQCIALSFYDEYGQQQGNCRSTFNGAQWCYVENDGXSSCPXLKRSTRYRGKYYSNHACITLPAYSPECLGFV 106
BLAST of hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000001834 (supercontig:LSalAtl2s:LSalAtl2s1318:34086:34563:-1 gene:EMLSAG00000001834 transcript:EMLSAT00000001834 description:"maker-LSalAtl2s1318-augustus-gene-0.14") HSP 1 Score: 50.8322 bits (120), Expect = 4.097e-8 Identity = 27/63 (42.86%), Postives = 32/63 (50.79%), Query Frame = 0 Query: 249 CDCQCNNYTFK-FDNTLHGNCLQPYKGALWCYVKDFGQSTCIDRLESSRVSGLFWSFQACGTP 310 C+CQC + F+ +GNC GA WCYVK G S C D S R G +WS A TP Sbjct: 38 CNCQCISLQFRDSRGRTYGNCRSTTNGAQWCYVKYDGFSPCPDLRVSQRFRGRYWSNHAXATP 100
BLAST of hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000006141 (supercontig:LSalAtl2s:LSalAtl2s335:388935:390297:1 gene:EMLSAG00000006141 transcript:EMLSAT00000006141 description:"maker-LSalAtl2s335-snap-gene-4.14") HSP 1 Score: 47.7506 bits (112), Expect = 8.642e-7 Identity = 41/94 (43.62%), Postives = 45/94 (47.87%), Query Frame = 0 Query: 223 VVVGRCAILVKNASLAKAQSEITQDVCDCQCNNYTFKFD-NTLHGNCLQPYK-GALWCYVKDFGQSTCIDRLESSRVSGLFW----SFQACGTP 310 +VV CAI KN + KA S T C CQCNNY FK GNC K GA WCYV +TC D SSR S +AC TP Sbjct: 9 LVVCACAIAQKNDIILKAASSRTN--CGCQCNNYIFKDKYGRTQGNCNTADKSGAKWCYVSR--GNTCNDVTYSSRKDERGQPRRISNEACATP 98 The following BLAST results are available for this feature:
BLAST of hypothetical protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 9
BLAST of hypothetical protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of hypothetical protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold82_size396747:381508..396814- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold82_size396747-snap-gene-2.41 ID=maker-scaffold82_size396747-snap-gene-2.41|Name=hypothetical protein|organism=Tigriopus kingsejongensis|type=gene|length=15307bp|location=Sequence derived from alignment at scaffold82_size396747:381508..396814- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'hypothetical protein' has the following synonyms
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