EMLSAG00000006141, EMLSAG00000006141-688907 (gene) Lepeophtheirus salmonis

Overview


Name	EMLSAG00000006141
Unique Name	EMLSAG00000006141-688907
Type	gene
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of EMLSAG00000006141 vs. C. finmarchicus
Match: gi|592932367|gb|GAXK01026186.1| (TSA: Calanus finmarchicus comp18158_c2_seq11 transcribed RNA sequence)

HSP 1 Score: 86.6557 bits (213), Expect = 5.757e-20
Identity = 46/95 (48.42%), Postives = 59/95 (62.11%), Query Frame = 0

Query:    7 ILLVVCACAIAQKNDIILKAASSRTNCGCQCNNYIFKDKYGRTQGNCNTADKSGAKWCYVS-RGNTCNDVTYSSRKDERGQPRRISNEACATPVC 100
            ++L+       +  D   KAAS  TNCGCQC+N  FKDKYG T GNC   D +GA+WCYV  R  +C D++Y+S +   G+P   S EACATP C
Sbjct:  178 LILLAPTAESVKTTDTNTKAASPYTNCGCQCSNLTFKDKYGNTHGNCKRVDHTGAQWCYVDPRQGSCQDLSYTSTRFP-GKP--WSYEACATPAC 453

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BLAST of EMLSAG00000006141 vs. C. finmarchicus
Match: gi|592932369|gb|GAXK01026184.1| (TSA: Calanus finmarchicus comp18158_c2_seq9 transcribed RNA sequence)

HSP 1 Score: 86.6557 bits (213), Expect = 6.836e-20
Identity = 46/95 (48.42%), Postives = 59/95 (62.11%), Query Frame = 0

Query:    7 ILLVVCACAIAQKNDIILKAASSRTNCGCQCNNYIFKDKYGRTQGNCNTADKSGAKWCYVS-RGNTCNDVTYSSRKDERGQPRRISNEACATPVC 100
            ++L+       +  D   KAAS  TNCGCQC+N  FKDKYG T GNC   D +GA+WCYV  R  +C D++Y+S +   G+P   S EACATP C
Sbjct:  178 LILLAPTAESVKTTDTNTKAASPYTNCGCQCSNLTFKDKYGNTHGNCKRVDHTGAQWCYVDPRQGSCQDLSYTSTRFP-GKP--WSYEACATPAC 453

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BLAST of EMLSAG00000006141 vs. C. finmarchicus
Match: gi|592956548|gb|GAXK01002008.1| (TSA: Calanus finmarchicus comp90527_c0_seq19 transcribed RNA sequence)

HSP 1 Score: 83.1889 bits (204), Expect = 1.374e-18
Identity = 40/97 (41.24%), Postives = 64/97 (65.98%), Query Frame = 0

Query:    3 LKLGILLVVCACAIAQKNDIILKAASSRTNCGCQCNNYIFKDKYGRTQGNCNTADKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRR-ISNEACATP 98
            + L + L++ + ++A +  + L+ A++   CGCQC++ +++DKYG  QGNC +AD + AKWCYV  G+TC+D+  S+R      PR   S +ACATP
Sbjct:  147 ISLAVFLMILSSSLAGRGSLKLRGAAAPA-CGCQCSSLVWQDKYGDVQGNCRSADHTKAKWCYVKEGSTCSDLVPSAR-----HPRNPWSYQACATP 419

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BLAST of EMLSAG00000006141 vs. C. finmarchicus
Match: gi|592956546|gb|GAXK01002010.1| (TSA: Calanus finmarchicus comp90527_c0_seq21 transcribed RNA sequence)

HSP 1 Score: 83.1889 bits (204), Expect = 1.554e-18
Identity = 40/97 (41.24%), Postives = 64/97 (65.98%), Query Frame = 0

Query:    3 LKLGILLVVCACAIAQKNDIILKAASSRTNCGCQCNNYIFKDKYGRTQGNCNTADKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRR-ISNEACATP 98
            + L + L++ + ++A +  + L+ A++   CGCQC++ +++DKYG  QGNC +AD + AKWCYV  G+TC+D+  S+R      PR   S +ACATP
Sbjct:  147 ISLAVFLMILSSSLAGRGSLKLRGAAAPA-CGCQCSSLVWQDKYGDVQGNCRSADHTKAKWCYVKEGSTCSDLVPSAR-----HPRNPWSYQACATP 419

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BLAST of EMLSAG00000006141 vs. C. finmarchicus
Match: gi|592956547|gb|GAXK01002009.1| (TSA: Calanus finmarchicus comp90527_c0_seq20 transcribed RNA sequence)

HSP 1 Score: 83.1889 bits (204), Expect = 1.655e-18
Identity = 40/97 (41.24%), Postives = 64/97 (65.98%), Query Frame = 0

Query:    3 LKLGILLVVCACAIAQKNDIILKAASSRTNCGCQCNNYIFKDKYGRTQGNCNTADKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRR-ISNEACATP 98
            + L + L++ + ++A +  + L+ A++   CGCQC++ +++DKYG  QGNC +AD + AKWCYV  G+TC+D+  S+R      PR   S +ACATP
Sbjct:  147 ISLAVFLMILSSSLAGRGSLKLRGAAAPA-CGCQCSSLVWQDKYGDVQGNCRSADHTKAKWCYVKEGSTCSDLVPSAR-----HPRNPWSYQACATP 419

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BLAST of EMLSAG00000006141 vs. C. finmarchicus
Match: gi|592956545|gb|GAXK01002011.1| (TSA: Calanus finmarchicus comp90527_c0_seq22 transcribed RNA sequence)

HSP 1 Score: 82.8037 bits (203), Expect = 1.901e-18
Identity = 40/97 (41.24%), Postives = 64/97 (65.98%), Query Frame = 0

Query:    3 LKLGILLVVCACAIAQKNDIILKAASSRTNCGCQCNNYIFKDKYGRTQGNCNTADKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRR-ISNEACATP 98
            + L + L++ + ++A +  + L+ A++   CGCQC++ +++DKYG  QGNC +AD + AKWCYV  G+TC+D+  S+R      PR   S +ACATP
Sbjct:  147 ISLAVFLMILSSSLAGRGSLKLRGAAAPA-CGCQCSSLVWQDKYGDVQGNCRSADHTKAKWCYVKEGSTCSDLVPSAR-----HPRNPWSYQACATP 419

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BLAST of EMLSAG00000006141 vs. C. finmarchicus
Match: gi|592848675|gb|GAXK01108869.1| (TSA: Calanus finmarchicus comp296545_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 80.8777 bits (198), Expect = 3.946e-18
Identity = 40/76 (52.63%), Postives = 53/76 (69.74%), Query Frame = 0

Query:   25 KAASSRTNCGCQCNNYIFKDKYGRTQGNCNTADKSGAKWCYV--SRGNTCNDVTYSSRKDERGQPRRISNEACATP 98
            KAAS  TNC CQC++  F+DKYGR QGNCN+AD +GA+WCYV  +  ++C D+ +S+R  +       S EACATP
Sbjct:  196 KAASPYTNCDCQCSSLTFQDKYGRIQGNCNSADHTGARWCYVDSAHHSSCQDLHHSARFPQNP----WSYEACATP 411

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BLAST of EMLSAG00000006141 vs. C. finmarchicus
Match: gi|592956549|gb|GAXK01002007.1| (TSA: Calanus finmarchicus comp90527_c0_seq18 transcribed RNA sequence)

HSP 1 Score: 83.1889 bits (204), Expect = 7.165e-18
Identity = 40/97 (41.24%), Postives = 64/97 (65.98%), Query Frame = 0

Query:    3 LKLGILLVVCACAIAQKNDIILKAASSRTNCGCQCNNYIFKDKYGRTQGNCNTADKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRR-ISNEACATP 98
            + L + L++ + ++A +  + L+ A++   CGCQC++ +++DKYG  QGNC +AD + AKWCYV  G+TC+D+  S+R      PR   S +ACATP
Sbjct:  147 ISLAVFLMILSSSLAGRGSLKLRGAAAPA-CGCQCSSLVWQDKYGDVQGNCRSADHTKAKWCYVKEGSTCSDLVPSAR-----HPRNPWSYQACATP 419

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BLAST of EMLSAG00000006141 vs. C. finmarchicus
Match: gi|592956554|gb|GAXK01002002.1| (TSA: Calanus finmarchicus comp90527_c0_seq13 transcribed RNA sequence)

HSP 1 Score: 83.1889 bits (204), Expect = 7.754e-18
Identity = 40/97 (41.24%), Postives = 64/97 (65.98%), Query Frame = 0

Query:    3 LKLGILLVVCACAIAQKNDIILKAASSRTNCGCQCNNYIFKDKYGRTQGNCNTADKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRR-ISNEACATP 98
            + L + L++ + ++A +  + L+ A++   CGCQC++ +++DKYG  QGNC +AD + AKWCYV  G+TC+D+  S+R      PR   S +ACATP
Sbjct:  147 ISLAVFLMILSSSLAGRGSLKLRGAAAPA-CGCQCSSLVWQDKYGDVQGNCRSADHTKAKWCYVKEGSTCSDLVPSAR-----HPRNPWSYQACATP 419

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BLAST of EMLSAG00000006141 vs. C. finmarchicus
Match: gi|592956557|gb|GAXK01001999.1| (TSA: Calanus finmarchicus comp90527_c0_seq10 transcribed RNA sequence)

HSP 1 Score: 83.1889 bits (204), Expect = 7.794e-18
Identity = 40/97 (41.24%), Postives = 64/97 (65.98%), Query Frame = 0

Query:    3 LKLGILLVVCACAIAQKNDIILKAASSRTNCGCQCNNYIFKDKYGRTQGNCNTADKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRR-ISNEACATP 98
            + L + L++ + ++A +  + L+ A++   CGCQC++ +++DKYG  QGNC +AD + AKWCYV  G+TC+D+  S+R      PR   S +ACATP
Sbjct:  147 ISLAVFLMILSSSLAGRGSLKLRGAAAPA-CGCQCSSLVWQDKYGDVQGNCRSADHTKAKWCYVKEGSTCSDLVPSAR-----HPRNPWSYQACATP 419

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BLAST of EMLSAG00000006141 vs. L. salmonis peptides
Match: EMLSAP00000006141 (pep:novel supercontig:LSalAtl2s:LSalAtl2s335:388935:390297:1 gene:EMLSAG00000006141 transcript:EMLSAT00000006141 description:"maker-LSalAtl2s335-snap-gene-4.14")

HSP 1 Score: 369.777 bits (948), Expect = 1.443e-131
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0

Query:    1 MYLKLGILLVVCACAIAQKNDIILKAASSRTNCGCQCNNYIFKDKYGRTQGNCNTADKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRISNEACATPVCNGRFTGGGQGGSFGGSSGGSGSFGGGXGGSGTFGGSNGGSGSFGGAMVEVDPPEEKCQLYYERITIMAHLAVLFTSHSFRGKI 183
            MYLKLGILLVVCACAIAQKNDIILKAASSRTNCGCQCNNYIFKDKYGRTQGNCNTADKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRISNEACATPVCNGRFTGGGQGGSFGGSSGGSGSFGGGXGGSGTFGGSNGGSGSFGGAMVEVDPPEEKCQLYYERITIMAHLAVLFTSHSFRGKI
Sbjct:    1 MYLKLGILLVVCACAIAQKNDIILKAASSRTNCGCQCNNYIFKDKYGRTQGNCNTADKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRISNEACATPVCNGRFTGGGQGGSFGGSSGGSGSFGGGXGGSGTFGGSNGGSGSFGGAMVEVDPPEEKCQLYYERITIMAHLAVLFTSHSFRGKI 183

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BLAST of EMLSAG00000006141 vs. L. salmonis peptides
Match: EMLSAP00000006139 (pep:novel supercontig:LSalAtl2s:LSalAtl2s335:347119:354560:1 gene:EMLSAG00000006139 transcript:EMLSAT00000006139 description:"snap_masked-LSalAtl2s335-processed-gene-4.8")

HSP 1 Score: 187.963 bits (476), Expect = 7.793e-59
Identity = 86/100 (86.00%), Postives = 90/100 (90.00%), Query Frame = 0

Query:    6 GILLVVCACAIAQKNDIILKAASSRTNCGCQCNNYIFKDKYGRTQGNCNTADKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRISNEACATPVCNGRFT 105
             +   + AC IAQKNDI LKAAS +TNCGCQCNNYIF DKYG+TQGNCNT DKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRISNEACATPVCNGRFT
Sbjct:   42 AVFFTIIACTIAQKNDIKLKAASLQTNCGCQCNNYIFLDKYGKTQGNCNTVDKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRISNEACATPVCNGRFT 141

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BLAST of EMLSAG00000006141 vs. L. salmonis peptides
Match: EMLSAP00000006138 (pep:novel supercontig:LSalAtl2s:LSalAtl2s335:340556:341608:-1 gene:EMLSAG00000006138 transcript:EMLSAT00000006138 description:"maker-LSalAtl2s335-snap-gene-3.5")

HSP 1 Score: 141.354 bits (355), Expect = 3.445e-42
Identity = 71/106 (66.98%), Postives = 79/106 (74.53%), Query Frame = 0

Query:    1 MYLKLGILLV-VCACAIAQKNDIILKAASSRTNCGCQCNNYIFKDKYGRTQGNCNTADKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRISNEACATPVCNGRFT 105
            MY KL ILL     CAIAQ  DI LKAAS ++NCGCQCN  +++D            DK+GAKWCYVSRGNTCNDVTYS R+DERGQPR+ISNEACATP CNGRFT
Sbjct:    1 MYFKLAILLFCFLFCAIAQNKDITLKAASLKSNCGCQCNX-LWEDTRK-------LVDKTGAKWCYVSRGNTCNDVTYSKRRDERGQPRQISNEACATPTCNGRFT 98

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BLAST of EMLSAG00000006141 vs. L. salmonis peptides
Match: EMLSAP00000007123 (pep:novel supercontig:LSalAtl2s:LSalAtl2s401:84241:84844:-1 gene:EMLSAG00000007123 transcript:EMLSAT00000007123 description:"maker-LSalAtl2s401-augustus-gene-0.14")

HSP 1 Score: 117.472 bits (293), Expect = 6.949e-33
Identity = 60/100 (60.00%), Postives = 70/100 (70.00%), Query Frame = 0

Query:    1 MYLKLGILLVVCACAIAQKNDIILKAASSRTNCGCQCNNYIFKDKYGRTQGNCNTADKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRISNEACATPVC 100
            M  K  I+ VV A   AQ  DI LKA S   NCGCQC+NYIF+D  G TQGNCN+AD++GAKWCYV RG+TC D   S R D+ G+ R+IS EACATP C
Sbjct:    1 MICKFLIISVVVALTSAQ--DITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYVDRGHTCQDTRGSGRNDQFGRRRQISYEACATPRC 98

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BLAST of EMLSAG00000006141 vs. L. salmonis peptides
Match: EMLSAP00000007122 (pep:novel supercontig:LSalAtl2s:LSalAtl2s401:64891:74089:-1 gene:EMLSAG00000007122 transcript:EMLSAT00000007122 description:"maker-LSalAtl2s401-augustus-gene-0.13")

HSP 1 Score: 116.701 bits (291), Expect = 1.782e-32
Identity = 61/100 (61.00%), Postives = 71/100 (71.00%), Query Frame = 0

Query:    1 MYLKLGILLVVCACAIAQKNDIILKAASSRTNCGCQCNNYIFKDKYGRTQGNCNTADKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRISNEACATPVC 100
            M  K  I+ VV A   AQ  DI LKA S   NCGCQC+NYIF+D  G TQGNCN+AD++GAKWCYV RG+TC D   S RKD+ G+ R+IS EACATP C
Sbjct:   99 MICKFLIISVVVALTSAQ--DITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYVDRGHTCQDTRGSGRKDQFGRRRQISYEACATPRC 196

HSP 2 Score: 105.145 bits (261), Expect = 4.917e-28
Identity = 55/94 (58.51%), Postives = 67/94 (71.28%), Query Frame = 0

Query:    1 MYLKLGILLVVCACAIAQKNDIILKAASSRTNCGCQCNNYIFKDKYGRTQGNCNTADKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRISNEA 94
            M  K+ I+ VV A   AQ  DI LKA S   NCGCQC+NYIF+D  G TQGNCN+AD++GAKWCYV RG+TC D   S R+D+ G+ R+IS EA
Sbjct:    1 MICKILIISVVVALTSAQ--DITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADQTGAKWCYVDRGHTCQDTRGSGRRDQFGRRRQISYEA 92

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BLAST of EMLSAG00000006141 vs. L. salmonis peptides
Match: EMLSAP00000007117 (pep:novel supercontig:LSalAtl2s:LSalAtl2s401:30551:49956:-1 gene:EMLSAG00000007117 transcript:EMLSAT00000007117 description:"maker-LSalAtl2s401-augustus-gene-0.12")

HSP 1 Score: 116.701 bits (291), Expect = 6.650e-32
Identity = 60/101 (59.41%), Postives = 73/101 (72.28%), Query Frame = 0

Query:    1 MYLKLGILLVVCACAIAQKNDIILKAASSRTNCGCQCNNYIFKDKYGRTQGNCNTADKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRISNEACATPVCN 101
            M  K+ I+ VV A   AQ  DI LKA S   NCGCQC+NYIF+D  G TQGNCN+AD++GAKWCYV RG+TC D   S+R D+ G+ R+IS EACATP C+
Sbjct:   56 MICKILIISVVVALTSAQ--DITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADQTGAKWCYVDRGHTCQDTIGSARNDQFGRRRQISYEACATPNCD 154

HSP 2 Score: 97.8265 bits (242), Expect = 5.269e-25
Identity = 50/82 (60.98%), Postives = 59/82 (71.95%), Query Frame = 0

Query:   21 DIILKAASSRTNCGCQCNNYIFKDKYGRTQGNCNTADKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRISNEACATPVCNG 102
            DI LKA S   NCGCQC+ YIF+D  G TQGNCN+AD++GAKWCYV+RG TC     S R  + G+ R+IS EACATP C G
Sbjct:  154 DITLKAPSLAVNCGCQCSIYIFQDVRGITQGNCNSADQTGAKWCYVNRGYTCQYTRGSGRNYQFGRRRQISYEACATPRCGG 235

HSP 3 Score: 59.6918 bits (143), Expect = 1.674e-11
Identity = 33/56 (58.93%), Postives = 38/56 (67.86%), Query Frame = 0

Query:    1 MYLKLGILLVVCACAIAQKNDIILKAASSRTNCGCQCNNYIFKDKYGRTQGNCNTA 56
            M  K+ I+ VV   A AQ  DI LKA S   NCGCQC+NYIF+D  G TQGNCN+A
Sbjct:    1 MICKILIISVVVVLASAQ--DITLKAPSLAVNCGCQCSNYIFQDVRGITQGNCNSA 54

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BLAST of EMLSAG00000006141 vs. L. salmonis peptides
Match: EMLSAP00000001015 (pep:novel supercontig:LSalAtl2s:LSalAtl2s116:786764:792986:-1 gene:EMLSAG00000001015 transcript:EMLSAT00000001015 description:"maker-LSalAtl2s116-augustus-gene-8.13")

HSP 1 Score: 115.161 bits (287), Expect = 1.580e-31
Identity = 59/100 (59.00%), Postives = 70/100 (70.00%), Query Frame = 0

Query:    1 MYLKLGILLVVCACAIAQKNDIILKAASSRTNCGCQCNNYIFKDKYGRTQGNCNTADKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRISNEACATPVC 100
            M  K+ IL +  A   AQ  DI LKA S   NCGCQC+NYIF+D  G TQGNCN+AD++GAKWCYV RG+TC D   S R+D  G+ R+IS EACATP C
Sbjct:    1 MISKILILSIFVAFGSAQ--DITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAKWCYVERGHTCQDTRRSXRRDNFGRLRQISYEACATPRC 98

HSP 2 Score: 53.9138 bits (128), Expect = 1.631e-9
Identity = 30/55 (54.55%), Postives = 35/55 (63.64%), Query Frame = 0

Query:    1 MYLKLGILLVVCACAIAQKNDIILKAASSRTNCGCQCNNYIFKDKYGRTQGNCNT 55
            M  K+ IL +      AQ  DI LKA S   NCGCQC+NYIF+D  G TQGNCN+
Sbjct:  172 MISKILILSIFVVFGSAQ--DITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNS 224

[Close]

BLAST of EMLSAG00000006141 vs. L. salmonis peptides
Match: EMLSAP00000006140 (pep:novel supercontig:LSalAtl2s:LSalAtl2s335:379177:380528:1 gene:EMLSAG00000006140 transcript:EMLSAT00000006140 description:"maker-LSalAtl2s335-snap-gene-4.15")

HSP 1 Score: 108.612 bits (270), Expect = 2.339e-30
Identity = 49/54 (90.74%), Postives = 51/54 (94.44%), Query Frame = 0

Query:   56 ADKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRISNEACATPVCNGRFTGGGQ 109
            ADKSGAKWCYVSRGNTCNDVTYSSRKDERGQPR+ISN+AC TPVCN RFT GGQ
Sbjct:   28 ADKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRKISNKACVTPVCNSRFTNGGQ 81

[Close]

BLAST of EMLSAG00000006141 vs. L. salmonis peptides
Match: EMLSAP00000001011 (pep:novel supercontig:LSalAtl2s:LSalAtl2s116:644091:644652:-1 gene:EMLSAG00000001011 transcript:EMLSAT00000001011 description:"maker-LSalAtl2s116-augustus-gene-6.17")

HSP 1 Score: 106.686 bits (265), Expect = 6.490e-29
Identity = 57/100 (57.00%), Postives = 68/100 (68.00%), Query Frame = 0

Query:    1 MYLKLGILLVVCACAIAQKNDIILKAASSRTNCGCQCNNYIFKDKYGRTQGNCNTADKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRISNEACATPVC 100
            M  K+ IL +  A   AQ  DI LKA S   NCGCQC+NYIF+D  G TQGNCN+AD++GAK+CYV  G T  D   S R+D  G+ R+ISNEACATP C
Sbjct:    1 MISKILILSIFVAFGSAQ--DITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVEPGXTXQDTRRSGRRDXFGRFRQISNEACATPRC 98

[Close]

BLAST of EMLSAG00000006141 vs. L. salmonis peptides
Match: EMLSAP00000012322 (pep:novel supercontig:LSalAtl2s:LSalAtl2s8:1311290:1311781:1 gene:EMLSAG00000012322 transcript:EMLSAT00000012322 description:"augustus_masked-LSalAtl2s8-processed-gene-15.4")

HSP 1 Score: 99.7525 bits (247), Expect = 2.337e-26
Identity = 50/101 (49.50%), Postives = 65/101 (64.36%), Query Frame = 0

Query:    7 ILLVVCACAIAQKNDIILKAASSRTNCGCQCNNYIFKDKYGRTQGNCNTADKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRISNEACATPVCNGRFTGG 107
            I+L+    A      I LKA S   NCGCQC+++IF+D++G+TQGNC + D+SGA+WC+V  GNTC D ++      RG  R ISNEACATP C   F  G
Sbjct:    5 IILLSALVAYVTSQGITLKAPSLAINCGCQCDSFIFRDRFGQTQGNCRSTDRSGARWCFVRPGNTCTDTSFF-----RG--RTISNEACATPRCGNIFPKG 98

[Close]

BLAST of EMLSAG00000006141 vs. nr
Match: gi|155966135|gb|ABU41022.1| (hypothetical protein [Lepeophtheirus salmonis])

HSP 1 Score: 112.464 bits (280), Expect = 2.372e-28
Identity = 56/94 (59.57%), Postives = 66/94 (70.21%), Query Frame = 0

Query:    7 ILLVVCACAIAQKNDIILKAASSRTNCGCQCNNYIFKDKYGRTQGNCNTADKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRISNEACATPVC 100
            IL+V    A     DI LKA S   NCGCQC+NYIF+D  G TQGNCN+AD++GAK+CYV  GNTC D   S R+D  G+ R+ISNEACATP C
Sbjct:    5 ILIVSIFVAFGSAQDITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVEPGNTCQDTRRSGRRDNFGRFRQISNEACATPRC 98

[Close]

BLAST of EMLSAG00000006141 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.31 (protein:Tk01605 transcript:maker-scaffold381_size190066-snap-gene-0.31-mRNA-1 annotation:"hypothetical protein")

HSP 1 Score: 92.8189 bits (229), Expect = 4.340e-24
Identity = 51/115 (44.35%), Postives = 70/115 (60.87%), Query Frame = 0

Query:    5 LGILLVVCA----CAIAQKNDIILKAASSRTNCGCQCNNYIFKDKYGRTQGNCNTADKSGAKWCYV--SRGNTCNDVTYS-SRKDERGQPRRISNEACATPVCNGRF-TGGGQGG 111
            +G+L +V +      +A+  DI+LKA S+  NCGCQC+ Y ++D  GR QGNC +AD + A WCY+  S   +C D+  S +R D  G+PRR S EAC+TP        G GQGG
Sbjct:   16 MGLLALVSSQITDTQVAESGDIVLKAPSNLINCGCQCDPYTWRDTLGRVQGNCRSADATKALWCYIPASAFTSCADIRQSRNRLDNFGRPRRWSYEACSTPALTSPICLGFGQGG 130

[Close]

BLAST of EMLSAG00000006141 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.32 (protein:Tk01608 transcript:maker-scaffold381_size190066-snap-gene-0.32-mRNA-1 annotation:"---NA---")

HSP 1 Score: 76.2554 bits (186), Expect = 8.206e-18
Identity = 37/80 (46.25%), Postives = 52/80 (65.00%), Query Frame = 0

Query:   21 DIILKAASSRTNCGCQCNNYIFKDKYGRTQGNCNTADKSGAKWCYVSR-GNTCNDVTYS-SRKDERGQPRRISNEACATP 98
            +II KA S+R +C CQC+NY +K    +  GNC TAD +  KWCY+ +  N C+D+ YS +R+D  G  R  S +AC+TP
Sbjct:   35 EIIQKAPSNRVSCNCQCDNYTYKGDDNQIHGNCFTADHTRGKWCYLDQYNNDCDDIQYSKNRRDSFGNLREWSYQACSTP 114

[Close]

BLAST of EMLSAG00000006141 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.30 (protein:Tk01607 transcript:maker-scaffold381_size190066-snap-gene-0.30-mRNA-1 annotation:"hypothetical protein AN3340.2")

HSP 1 Score: 73.9442 bits (180), Expect = 6.046e-17
Identity = 40/110 (36.36%), Postives = 63/110 (57.27%), Query Frame = 0

Query:    1 MYLKLGILLVVCACAIAQKN----------DIILKAASSRTNCGCQCNNYIFKDKYGRTQGNCNTADKSGAKWCYVSR-GNTCNDVTYS-SRKDERGQPRRISNEACATP 98
            ++  L  +L + A   AQ            +I+ KA S++ +C CQC+NY +K    +  GNC +AD++ AKWCYV +    C+D+ YS +R+D  G  R+ S +AC+TP
Sbjct:    3 VFCILSTVLALTALTQAQDEAEDGVDTKSVEILQKAPSNQVSCNCQCDNYTYKGGDNQIHGNCFSADQTKAKWCYVDQYSGECDDIQYSKNRRDSHGNLRKWSYQACSTP 112

[Close]

BLAST of EMLSAG00000006141 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold82_size396747-snap-gene-2.41 (protein:Tk06844 transcript:maker-scaffold82_size396747-snap-gene-2.41-mRNA-1 annotation:"hypothetical protein")

HSP 1 Score: 49.2914 bits (116), Expect = 1.381e-7
Identity = 36/76 (47.37%), Postives = 39/76 (51.32%), Query Frame = 0

Query:    9 LVVCACAIAQKNDIILKAASSRTN--CGCQCNNYIFKDKYGRTQGNCNTADKSGAKWCYVSR--GNTCNDVTYSSR 80
            +VV  CAI  KN  + KA S  T   C CQCNNY FK       GNC    K GA WCYV     +TC D   SSR
Sbjct:  223 VVVGRCAILVKNASLAKAQSEITQDVCDCQCNNYTFKFD-NTLHGNCLQPYK-GALWCYVKDFGQSTCIDRLESSR 296

The following BLAST results are available for this feature:

BLAST of EMLSAG00000006141 vs. GO
BLAST of EMLSAG00000006141 vs. C. finmarchicus
BLAST of EMLSAG00000006141 vs. L. salmonis peptides
BLAST of EMLSAG00000006141 vs. SwissProt
BLAST of EMLSAG00000006141 vs. Select Arthropod Genomes
BLAST of EMLSAG00000006141 vs. nr
BLAST of EMLSAG00000006141 vs. Tigriopus kingsejongenis genes

BLAST of EMLSAG00000006141 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000006141 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|592932367\|gb\|GAXK01026186.1\|	5.757e-20	48.42	TSA: Calanus finmarchicus comp18158_c2_seq11 trans...	[more]
gi\|592932369\|gb\|GAXK01026184.1\|	6.836e-20	48.42	TSA: Calanus finmarchicus comp18158_c2_seq9 transc...	[more]
gi\|592956548\|gb\|GAXK01002008.1\|	1.374e-18	41.24	TSA: Calanus finmarchicus comp90527_c0_seq19 trans...	[more]
gi\|592956546\|gb\|GAXK01002010.1\|	1.554e-18	41.24	TSA: Calanus finmarchicus comp90527_c0_seq21 trans...	[more]
gi\|592956547\|gb\|GAXK01002009.1\|	1.655e-18	41.24	TSA: Calanus finmarchicus comp90527_c0_seq20 trans...	[more]
gi\|592956545\|gb\|GAXK01002011.1\|	1.901e-18	41.24	TSA: Calanus finmarchicus comp90527_c0_seq22 trans...	[more]
gi\|592848675\|gb\|GAXK01108869.1\|	3.946e-18	52.63	TSA: Calanus finmarchicus comp296545_c0_seq2 trans...	[more]
gi\|592956549\|gb\|GAXK01002007.1\|	7.165e-18	41.24	TSA: Calanus finmarchicus comp90527_c0_seq18 trans...	[more]
gi\|592956554\|gb\|GAXK01002002.1\|	7.754e-18	41.24	TSA: Calanus finmarchicus comp90527_c0_seq13 trans...	[more]
gi\|592956557\|gb\|GAXK01001999.1\|	7.794e-18	41.24	TSA: Calanus finmarchicus comp90527_c0_seq10 trans...	[more]

Pages

BLAST of EMLSAG00000006141 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 21


Match Name	E-value	Identity	Description
EMLSAP00000006141	1.443e-131	100.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s335:38893...	[more]
EMLSAP00000006139	7.793e-59	86.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s335:34711...	[more]
EMLSAP00000006138	3.445e-42	66.98	pep:novel supercontig:LSalAtl2s:LSalAtl2s335:34055...	[more]
EMLSAP00000007123	6.949e-33	60.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s401:84241...	[more]
EMLSAP00000007122	1.782e-32	61.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s401:64891...	[more]
EMLSAP00000007117	6.650e-32	59.41	pep:novel supercontig:LSalAtl2s:LSalAtl2s401:30551...	[more]
EMLSAP00000001015	1.580e-31	59.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s116:78676...	[more]
EMLSAP00000006140	2.339e-30	90.74	pep:novel supercontig:LSalAtl2s:LSalAtl2s335:37917...	[more]
EMLSAP00000001011	6.490e-29	57.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s116:64409...	[more]
EMLSAP00000012322	2.337e-26	49.50	pep:novel supercontig:LSalAtl2s:LSalAtl2s8:1311290...	[more]

Pages

BLAST of EMLSAG00000006141 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000006141 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000006141 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 1


Match Name	E-value	Identity	Description
gi\|155966135\|gb\|ABU41022.1\|	2.372e-28	59.57	hypothetical protein [Lepeophtheirus salmonis]	[more]

BLAST of EMLSAG00000006141 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 4


Match Name	E-value	Identity	Description
maker-scaffold381_size190066-snap-gene-0.31	4.340e-24	44.35	protein:Tk01605 transcript:maker-scaffold381_size1...	[more]
maker-scaffold381_size190066-snap-gene-0.32	8.206e-18	46.25	protein:Tk01608 transcript:maker-scaffold381_size1...	[more]
maker-scaffold381_size190066-snap-gene-0.30	6.046e-17	36.36	protein:Tk01607 transcript:maker-scaffold381_size1...	[more]
maker-scaffold82_size396747-snap-gene-2.41	1.381e-7	47.37	protein:Tk06844 transcript:maker-scaffold82_size39...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s335	supercontig	LSalAtl2s335:388935..390297 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016
Blast vs. GO	2014-04-02
TblastN vs C. finmarchicus TSA	2014-05-09
Blastp vs. self	2014-05-10
Blastp vs. SwissProt	2017-02-10
Blastp vs. Selected Arthropods	2017-02-20
Blastp vs. NR (2/2017)	2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins	2018-04-18

Properties


Property Name	Value
Logic name	ensemblgenomes
Description	maker-LSalAtl2s335-snap-gene-4.14
Biotype	protein_coding
Evidence	IEA
Note	hypothetical protein [Lepeophtheirus salmonis]

Cross References

External references for this gene


Database	Accession
Ensembl Metazoa (gene)	EMLSAG00000006141 (primary cross-reference)

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
EMLSAT00000006141	EMLSAT00000006141-701988	Lepeophtheirus salmonis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at LSalAtl2s335:388935..390297+

gene from alignment at LSalAtl2s335:388935..390297+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAG00000006141-688907 ID=EMLSAG00000006141-688907|Name=EMLSAG00000006141|organism=Lepeophtheirus salmonis|type=gene|length=1363bp|location=Sequence derived from alignment at LSalAtl2s335:388935..390297+ (Lepeophtheirus salmonis)
ATGTACTTAAAATTAGGAATCCTCCTTGTTGTTTGTGCTTGTGCAATAGC
ACAGAAGAATGATATTATACTCAAGGCAGCTTCATCACGAACCAATTGTG
GATGTCAATGTAATAACTACATATTCAAAGATAAATATGGGAGGACACAA
GGAAACTGCAACACGTAAGACATTTTCTAATGATTTTAAAATGAGATATT
CTAACATGATACATATATCTGTTAATAATGACAGAGCTGACAAATCGGGA
GCCAAATGGTGTTACGTCTCTCGTGGAAATACTTGTAATGACGTGACTTA
CTCTAGCAGAAAGGACGAAAGAGGACAACCCAGAAGGATATCAAATGAAG
CTTGTGCCACACCTGTTTGTAATGGTCGTTTTACTGGTGGAGGTCAAGGT
GGATCCTTTGGAGGAAGCAGTGGTGGTAGTGGTTCATTTGGAGGAGGCCR
CGGTGGAAGTGGCACTTTCGGAGGAAGCAATGGYGGAAGTGGCTCCTTCG
GAGGAGCTATGGTGGAAGTGGATCCTCCGGAGGTAGTGGTNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNTAAATTATTTTTAGTTCATTTTTAACTATGAGA
AAGAAACTGTTGTCCCTAACAAATAATCATAATATTAACAAATTAGTTCT
TAATTAATAAAACTTTAATACATTGTAATTTTAAAACTTCCTTAAAAAAA
TATTTTTCAAGGCCATTTATAAAATATAACATGAGAATTTGACATAAAAT
AATTATTTGCACAGTTTTTTCAGGAAAAATGTCAGTTATACTATGAAAGA
ATCACAATAATGGCACATTTAGCAGTGCTATTCACAAGTCATTCTTTTCG
AGGCAAAATTTAA

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