EMLSAG00000001837, EMLSAG00000001837-684603 (gene) Lepeophtheirus salmonis

Overview


Name	EMLSAG00000001837
Unique Name	EMLSAG00000001837-684603
Type	gene
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of EMLSAG00000001837 vs. C. finmarchicus
Match: gi|592953585|gb|GAXK01004968.1| (TSA: Calanus finmarchicus comp348412_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 75.0998 bits (183), Expect = 7.199e-17
Identity = 42/111 (37.84%), Postives = 60/111 (54.05%), Query Frame = 0

Query:    1 MYLGVTFILLSAVLVGFSHSQDXQQXXXXXXXXGGE--DCNCQCMSLKFRDSRGTTYGNCESTIN-GAQWCYVKYDRFSPCPDLQSSRRFNGRYWSNHACATPAENSPECR 108
            ++L ++F  L A+ + F  + +  +             +C CQC SL FRD  G  +GNC+S  + GAQWCY+    +S C DLQ S +F    WS  ACATP  +S EC+
Sbjct:   35 VFLKISFFSL-AIGINFDPAGEDARNATLLTRAASTYVNCGCQCSSLTFRDEYGKVHGNCKSVDDKGAQWCYISSTHYSSCEDLQLSAKFPNNPWSYTACATPDLSSYECQ 364

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BLAST of EMLSAG00000001837 vs. C. finmarchicus
Match: gi|592932365|gb|GAXK01026188.1| (TSA: Calanus finmarchicus comp18158_c2_seq13 transcribed RNA sequence)

HSP 1 Score: 67.0106 bits (162), Expect = 8.407e-14
Identity = 36/67 (53.73%), Postives = 45/67 (67.16%), Query Frame = 0

Query:   37 DCNCQCMSLKFRDSRGTTYGNCESTIN-GAQWCYVKYDRFSPCPDLQ-SSRRFNGRYWSNHACATPA 101
            +C CQC +L FRD  G T+GNC+S+ + GA WCYV   + S C DL  +S RF G+ WS  ACATPA
Sbjct:    4 NCGCQCSNLTFRDKYGKTHGNCKSSDHTGAVWCYVSPAQTSSCQDLSYTSTRFPGKPWSYEACATPA 204

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BLAST of EMLSAG00000001837 vs. C. finmarchicus
Match: gi|592932379|gb|GAXK01026174.1| (TSA: Calanus finmarchicus comp18158_c1_seq4 transcribed RNA sequence)

HSP 1 Score: 67.3958 bits (163), Expect = 9.233e-14
Identity = 37/72 (51.39%), Postives = 41/72 (56.94%), Query Frame = 0

Query:   37 DCNCQCMSLKFRDSRGTTYGNCESTI-NGAQWCYVKYDRFSPCPDLQSSRRFNGRYWSNHACATPAENSPEC 107
            +C CQC SL FRD+ GT  GNC++    GAQWCYV     S C DL  S RF    WS  ACATP   S  C
Sbjct:  130 NCGCQCSSLTFRDTSGTVQGNCKTVDGTGAQWCYVDSSSSS-CQDLVPSERFPHNPWSYEACATPDLGSALC 342

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BLAST of EMLSAG00000001837 vs. C. finmarchicus
Match: gi|592932366|gb|GAXK01026187.1| (TSA: Calanus finmarchicus comp18158_c2_seq12 transcribed RNA sequence)

HSP 1 Score: 67.0106 bits (162), Expect = 1.023e-13
Identity = 36/67 (53.73%), Postives = 45/67 (67.16%), Query Frame = 0

Query:   37 DCNCQCMSLKFRDSRGTTYGNCESTIN-GAQWCYVKYDRFSPCPDLQ-SSRRFNGRYWSNHACATPA 101
            +C CQC +L FRD  G T+GNC+S+ + GA WCYV   + S C DL  +S RF G+ WS  ACATPA
Sbjct:    4 NCGCQCSNLTFRDKYGKTHGNCKSSDHTGAVWCYVSPAQTSSCQDLSYTSTRFPGKPWSYEACATPA 204

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BLAST of EMLSAG00000001837 vs. C. finmarchicus
Match: gi|592932370|gb|GAXK01026183.1| (TSA: Calanus finmarchicus comp18158_c2_seq8 transcribed RNA sequence)

HSP 1 Score: 67.0106 bits (162), Expect = 3.598e-13
Identity = 36/67 (53.73%), Postives = 45/67 (67.16%), Query Frame = 0

Query:   37 DCNCQCMSLKFRDSRGTTYGNCESTIN-GAQWCYVKYDRFSPCPDLQ-SSRRFNGRYWSNHACATPA 101
            +C CQC +L FRD  G T+GNC+S+ + GA WCYV   + S C DL  +S RF G+ WS  ACATPA
Sbjct:    4 NCGCQCSNLTFRDKYGKTHGNCKSSDHTGAVWCYVSPAQTSSCQDLSYTSTRFPGKPWSYEACATPA 204

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BLAST of EMLSAG00000001837 vs. C. finmarchicus
Match: gi|592932375|gb|GAXK01026178.1| (TSA: Calanus finmarchicus comp18158_c2_seq3 transcribed RNA sequence)

HSP 1 Score: 67.3958 bits (163), Expect = 4.075e-13
Identity = 36/67 (53.73%), Postives = 45/67 (67.16%), Query Frame = 0

Query:   37 DCNCQCMSLKFRDSRGTTYGNCESTIN-GAQWCYVKYDRFSPCPDLQ-SSRRFNGRYWSNHACATPA 101
            +C CQC +L FRD  G T+GNC+S+ + GA WCYV   + S C DL  +S RF G+ WS  ACATPA
Sbjct:    4 NCGCQCSNLTFRDKYGKTHGNCKSSDHTGAVWCYVSPAQTSSCQDLSYTSTRFPGKPWSYEACATPA 204

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BLAST of EMLSAG00000001837 vs. C. finmarchicus
Match: gi|592932373|gb|GAXK01026180.1| (TSA: Calanus finmarchicus comp18158_c2_seq5 transcribed RNA sequence)

HSP 1 Score: 67.0106 bits (162), Expect = 4.301e-13
Identity = 36/67 (53.73%), Postives = 45/67 (67.16%), Query Frame = 0

Query:   37 DCNCQCMSLKFRDSRGTTYGNCESTIN-GAQWCYVKYDRFSPCPDLQ-SSRRFNGRYWSNHACATPA 101
            +C CQC +L FRD  G T+GNC+S+ + GA WCYV   + S C DL  +S RF G+ WS  ACATPA
Sbjct:    4 NCGCQCSNLTFRDKYGKTHGNCKSSDHTGAVWCYVSPAQTSSCQDLSYTSTRFPGKPWSYEACATPA 204

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BLAST of EMLSAG00000001837 vs. C. finmarchicus
Match: gi|592932371|gb|GAXK01026182.1| (TSA: Calanus finmarchicus comp18158_c2_seq7 transcribed RNA sequence)

HSP 1 Score: 67.0106 bits (162), Expect = 4.385e-13
Identity = 36/67 (53.73%), Postives = 45/67 (67.16%), Query Frame = 0

Query:   37 DCNCQCMSLKFRDSRGTTYGNCESTIN-GAQWCYVKYDRFSPCPDLQ-SSRRFNGRYWSNHACATPA 101
            +C CQC +L FRD  G T+GNC+S+ + GA WCYV   + S C DL  +S RF G+ WS  ACATPA
Sbjct:    4 NCGCQCSNLTFRDKYGKTHGNCKSSDHTGAVWCYVSPAQTSSCQDLSYTSTRFPGKPWSYEACATPA 204

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BLAST of EMLSAG00000001837 vs. C. finmarchicus
Match: gi|592932374|gb|GAXK01026179.1| (TSA: Calanus finmarchicus comp18158_c2_seq4 transcribed RNA sequence)

HSP 1 Score: 67.0106 bits (162), Expect = 4.567e-13
Identity = 36/67 (53.73%), Postives = 45/67 (67.16%), Query Frame = 0

Query:   37 DCNCQCMSLKFRDSRGTTYGNCESTIN-GAQWCYVKYDRFSPCPDLQ-SSRRFNGRYWSNHACATPA 101
            +C CQC +L FRD  G T+GNC+S+ + GA WCYV   + S C DL  +S RF G+ WS  ACATPA
Sbjct:    4 NCGCQCSNLTFRDKYGKTHGNCKSSDHTGAVWCYVSPAQTSSCQDLSYTSTRFPGKPWSYEACATPA 204

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BLAST of EMLSAG00000001837 vs. C. finmarchicus
Match: gi|592932372|gb|GAXK01026181.1| (TSA: Calanus finmarchicus comp18158_c2_seq6 transcribed RNA sequence)

HSP 1 Score: 66.6254 bits (161), Expect = 6.219e-13
Identity = 36/67 (53.73%), Postives = 45/67 (67.16%), Query Frame = 0

Query:   37 DCNCQCMSLKFRDSRGTTYGNCESTIN-GAQWCYVKYDRFSPCPDLQ-SSRRFNGRYWSNHACATPA 101
            +C CQC +L FRD  G T+GNC+S+ + GA WCYV   + S C DL  +S RF G+ WS  ACATPA
Sbjct:    4 NCGCQCSNLTFRDKYGKTHGNCKSSDHTGAVWCYVSPAQTSSCQDLSYTSTRFPGKPWSYEACATPA 204

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BLAST of EMLSAG00000001837 vs. L. salmonis peptides
Match: EMLSAP00000001837 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1318:72145:72812:1 gene:EMLSAG00000001837 transcript:EMLSAT00000001837 description:"maker-LSalAtl2s1318-augustus-gene-0.12")

HSP 1 Score: 278.1 bits (710), Expect = 4.541e-97
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0

Query:    1 MYLGVTFILLSAVLVGFSHSQDXQQAPAAAPAPGGEDCNCQCMSLKFRDSRGTTYGNCESTINGAQWCYVKYDRFSPCPDLQSSRRFNGRYWSNHACATPAENSPECRFSTRPSVPFASSPASSVANSGVADDVF 135
            MYLGVTFILLSAVLVGFSHSQDXQQAPAAAPAPGGEDCNCQCMSLKFRDSRGTTYGNCESTINGAQWCYVKYDRFSPCPDLQSSRRFNGRYWSNHACATPAENSPECRFSTRPSVPFASSPASSVANSGVADDVF
Sbjct:    1 MYLGVTFILLSAVLVGFSHSQDXQQAPAAAPAPGGEDCNCQCMSLKFRDSRGTTYGNCESTINGAQWCYVKYDRFSPCPDLQSSRRFNGRYWSNHACATPAENSPECRFSTRPSVPFASSPASSVANSGVADDVF 135

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BLAST of EMLSAG00000001837 vs. L. salmonis peptides
Match: EMLSAP00000001834 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1318:34086:34563:-1 gene:EMLSAG00000001834 transcript:EMLSAT00000001834 description:"maker-LSalAtl2s1318-augustus-gene-0.14")

HSP 1 Score: 177.948 bits (450), Expect = 1.278e-57
Identity = 98/136 (72.06%), Postives = 110/136 (80.88%), Query Frame = 0

Query:    1 MYLGVTFILLSAVLVGFSHSQDXQQAPAAAPAPGGEDCNCQCMSLKFRDSRGTTYGNCESTINGAQWCYVKYDRFSPCPDLQSSRRFNGRYWSNHACATPAENSPECRFSTRPSVPF-ASSPASSVANSGVADDVF 135
            M LG+ F++LS VLVGFSHSQ+ Q+A AAAPAPGG+DCNCQC+SL+FRDSRG TYGNC ST NGAQWCYVKYD FSPCPDL+ S+RF GRYWSNHA ATPAENSP  R    P +P  A  PASSV +  VADDVF
Sbjct:    1 MSLGIKFLILSXVLVGFSHSQNIQEAAAAAPAPGGDDCNCQCISLQFRDSRGRTYGNCRSTTNGAQWCYVKYDGFSPCPDLRVSQRFRGRYWSNHAXATPAENSPIXRSVFPPFIPLXAXXPASSVPSKNVADDVF 136

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BLAST of EMLSAG00000001837 vs. L. salmonis peptides
Match: EMLSAP00000000858 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1146:143094:143555:-1 gene:EMLSAG00000000858 transcript:EMLSAT00000000858 description:"maker-LSalAtl2s1146-augustus-gene-0.4")

HSP 1 Score: 168.318 bits (425), Expect = 6.872e-54
Identity = 83/134 (61.94%), Postives = 108/134 (80.60%), Query Frame = 0

Query:    1 MYLGVTFILLSAVLVGFSHSQDXQQAPAAAPAPGGEDCNCQCMSLKFRDSRGTTYGNCESTINGAQWCYVKYDRFSPCPDLQSSRRFNGRYWSNHACATPAENSPECRFSTRPSVPFASSPASSVANSGVADDV 134
            M LG+ F+L  A L+ F+H+Q+ Q+A AAAPAPGG DCNCQC+SL+FRDS+G  +GNC+ST+NGAQWCYVKYD++SPCPDL  S+RF+GRYWSNHACATP+E+SP C++   P V   ++ ASS ++  VAD V
Sbjct:    1 MSLGIKFLLFGAFLMAFAHAQNEQKAAAAAPAPGGNDCNCQCISLQFRDSKGKIHGNCKSTLNGAQWCYVKYDKYSPCPDLGRSQRFSGRYWSNHACATPSEDSPVCKYVFPPFVR-ETAFASSASSKNVADGV 133

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BLAST of EMLSAG00000001837 vs. L. salmonis peptides
Match: EMLSAP00000000311 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1046:206967:207933:1 gene:EMLSAG00000000311 transcript:EMLSAT00000000311 description:"maker-LSalAtl2s1046-augustus-gene-1.15")

HSP 1 Score: 166.392 bits (420), Expect = 8.489e-53
Identity = 94/136 (69.12%), Postives = 109/136 (80.15%), Query Frame = 0

Query:    1 MYLGVTFILLSAVLVGFSHSQDXQQAPAAAPAPGGEDCNCQCMSLKFRDSRGTTYGNCESTINGAQWCYVKYDRFSPCPDLQSSRRFNGRYWSNHACATPAENSPECRFSTRPSVPF-ASSPASSVANSGVADDVF 135
            M LG+ F+LLS VLVGF H+Q+ +QA AAAP PGG+DCNCQ +SL FRDSRGT +GNC+S INGAQWCYVKYDRFSPCPDL++S+RF GRYWSNHACATP ENSP C     P +PF ASS ASS  +  V+DDV 
Sbjct:   21 MSLGIKFLLLSGVLVGFVHAQNKKQAAAAAPDPGGDDCNCQXISLTFRDSRGTIHGNCKSMINGAQWCYVKYDRFSPCPDLRASQRFRGRYWSNHACATPPENSPICSSELPPFIPFSASSSASSAPSKNVSDDVL 156

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BLAST of EMLSAG00000001837 vs. L. salmonis peptides
Match: EMLSAP00000000366 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1053:57010:58418:-1 gene:EMLSAG00000000366 transcript:EMLSAT00000000366 description:"snap-LSalAtl2s1053-processed-gene-0.45")

HSP 1 Score: 96.6709 bits (239), Expect = 4.851e-26
Identity = 49/104 (47.12%), Postives = 63/104 (60.58%), Query Frame = 0

Query:    4 GVTFILLSAVLVGFSHSQDXQQAPAAAPAPGGEDCNCQCMSLKFRDSRGTTYGNCESTINGAQWCYVKYDRFSPCPDLQSSRRFNGRYWSNHACATPAENSPEC 107
            G+   ++ A  V +S++Q    AP  + A    DC CQC++L F D  G   GNC ST NGAQWCYV+ D  S CP L+ S R+ G+Y+SNHAC T    SPEC
Sbjct:    3 GIYIGIVLATCVYWSNAQQFAPAPINSQA----DCQCQCIALSFYDEYGQQQGNCRSTFNGAQWCYVENDGXSSCPXLKRSTRYRGKYYSNHACITLPAYSPEC 102

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BLAST of EMLSAG00000001837 vs. L. salmonis peptides
Match: EMLSAP00000002406 (pep:novel supercontig:LSalAtl2s:LSalAtl2s145:1581187:1602244:-1 gene:EMLSAG00000002406 transcript:EMLSAT00000002406 description:"maker-LSalAtl2s145-augustus-gene-16.13")

HSP 1 Score: 91.2781 bits (225), Expect = 8.351e-24
Identity = 40/78 (51.28%), Postives = 51/78 (65.38%), Query Frame = 0

Query:   36 EDCNCQCMSLKFRDSRGTTYGNCESTINGAQWCYVKYDRFSPCPDLQSSRRFNGRYWSNHACATPAENSPECRFSTRP 113
             +C CQC+ L++ D +G  +GNC ST +GA WCYVKY + SPC DL  S  F  RYWS HAC TP E+S  C+ +  P
Sbjct:   53 RNCLCQCIPLQYVDRKGIMHGNCTSTNDGALWCYVKYQKSSPCGDLVKSDIFQDRYWSYHACTTPVEDSSICKDTVIP 130

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BLAST of EMLSAG00000001837 vs. L. salmonis peptides
Match: EMLSAP00000005911 (pep:novel supercontig:LSalAtl2s:LSalAtl2s31:1336906:1338922:-1 gene:EMLSAG00000005911 transcript:EMLSAT00000005911 description:"maker-LSalAtl2s31-augustus-gene-12.7")

HSP 1 Score: 80.8777 bits (198), Expect = 6.945e-20
Identity = 44/99 (44.44%), Postives = 53/99 (53.54%), Query Frame = 0

Query:    7 FILLSAVLVGFSHSQDXQQAPAAAPAPGG---EDCNCQCMSLKFRDSRGTTYGNCESTINGAQWCYVKYD--RFSPCPDLQSSRRFNGRYWSNHACATP 100
             +L S +L+G   S+   Q    A AP      DC CQC SL FRD      GNC +T  GAQWCY+  +  R   CPD Q SRR  G+ WS  +CATP
Sbjct:    5 IVLSSFLLIGVLLSKSEAQTVLKAAAPASTSINDCFCQCSSLTFRDRNNRVNGNCRTTFQGAQWCYITDEAARNGDCPDAQPSRRQPGKQWSFFSCATP 103

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BLAST of EMLSAG00000001837 vs. L. salmonis peptides
Match: EMLSAP00000001327 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1223:219743:221280:1 gene:EMLSAG00000001327 transcript:EMLSAT00000001327 description:"maker-LSalAtl2s1223-augustus-gene-2.67")

HSP 1 Score: 77.411 bits (189), Expect = 8.047e-19
Identity = 39/76 (51.32%), Postives = 45/76 (59.21%), Query Frame = 0

Query:   28 AAAPAPGGEDCNCQCMSLKFRDSRGTTYGNCESTINGAQWCYVKYD--RFSPCPDLQSSRRFNGRYWSNHACATPA 101
            AAAPA    DC CQC SL FRD      GNC +T NG QWCY+  +  R   CPD   S RF G+ WS  +CATP+
Sbjct:   11 AAAPANNVRDCFCQCSSLSFRDKNNRVNGNCRTTFNGGQWCYITDEAARNGDCPDSNPSTRFPGKKWSYFSCATPS 86

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BLAST of EMLSAG00000001837 vs. L. salmonis peptides
Match: EMLSAP00000012322 (pep:novel supercontig:LSalAtl2s:LSalAtl2s8:1311290:1311781:1 gene:EMLSAG00000012322 transcript:EMLSAT00000012322 description:"augustus_masked-LSalAtl2s8-processed-gene-15.4")

HSP 1 Score: 60.077 bits (144), Expect = 2.162e-12
Identity = 39/94 (41.49%), Postives = 50/94 (53.19%), Query Frame = 0

Query:    8 ILLSAVLVGFSHSQDXQQAPAAAPAPGGEDCNCQCMSLKFRDSRGTTYGNCEST-INGAQWCYVKYDRFSPCPDLQSSRRFNGRYWSNHACATP 100
            ILLSA++   +      +AP+ A      +C CQC S  FRD  G T GNC ST  +GA+WC+V+     P      +  F GR  SN ACATP
Sbjct:    6 ILLSALVAYVTSQGITLKAPSLAI-----NCGCQCDSFIFRDRFGQTQGNCRSTDRSGARWCFVR-----PGNTCTDTSFFRGRTISNEACATP 89

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BLAST of EMLSAG00000001837 vs. L. salmonis peptides
Match: EMLSAP00000007123 (pep:novel supercontig:LSalAtl2s:LSalAtl2s401:84241:84844:-1 gene:EMLSAG00000007123 transcript:EMLSAT00000007123 description:"maker-LSalAtl2s401-augustus-gene-0.14")

HSP 1 Score: 59.6918 bits (143), Expect = 3.400e-12
Identity = 41/98 (41.84%), Postives = 53/98 (54.08%), Query Frame = 0

Query:    9 LLSAVLVGFSHSQDXQ-QAPAAAPAPGGEDCNCQCMSLKFRDSRGTTYGNCEST-INGAQWCYVKYDRFSPCPDLQSSRRFNG----RYWSNHACATP 100
            L+ +V+V  + +QD   +AP+ A      +C CQC +  FRD RG T GNC S    GA+WCYV  DR   C D + S R +     R  S  ACATP
Sbjct:    6 LIISVVVALTSAQDITLKAPSLAV-----NCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYV--DRGHTCQDTRGSGRNDQFGRRRQISYEACATP 96

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BLAST of EMLSAG00000001837 vs. nr
Match: gi|155966304|gb|ABU41105.1| (hypothetical protein [Lepeophtheirus salmonis])

HSP 1 Score: 101.293 bits (251), Expect = 5.441e-25
Identity = 50/104 (48.08%), Postives = 65/104 (62.50%), Query Frame = 0

Query:    4 GVTFILLSAVLVGFSHSQDXQQAPAAAPAPGGEDCNCQCMSLKFRDSRGTTYGNCESTINGAQWCYVKYDRFSPCPDLQSSRRFNGRYWSNHACATPAENSPEC 107
            G+   ++ A  V +S++Q    AP  + A    DC CQC++L F D  G   GNC ST NGAQWCYV+ D +S CPDL+ S R+ G+Y+SNHAC T    SPEC
Sbjct:    3 GIYIGIVLATCVYWSNAQQFAPAPINSQA----DCQCQCIALSFYDEYGQQQGNCRSTFNGAQWCYVENDGYSSCPDLKRSTRYRGKYYSNHACITLPAYSPEC 102

[Close]

BLAST of EMLSAG00000001837 vs. nr
Match: gi|155966135|gb|ABU41022.1| (hypothetical protein [Lepeophtheirus salmonis])

HSP 1 Score: 57.7658 bits (138), Expect = 6.913e-8
Identity = 42/102 (41.18%), Postives = 58/102 (56.86%), Query Frame = 0

Query:    5 VTFILLSAVLVGFSHSQDXQ-QAPAAAPAPGGEDCNCQCMSLKFRDSRGTTYGNCEST-INGAQWCYVKYDRFSPCPDL-QSSRRFN-GRY--WSNHACATP 100
            ++ IL+ ++ V F  +QD   +AP+ A      +C CQC +  FRD  G T GNC S    GA++CYV+    + C D  +S RR N GR+   SN ACATP
Sbjct:    2 ISKILIVSIFVAFGSAQDITLKAPSLAV-----NCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVEPG--NTCQDTRRSGRRDNFGRFRQISNEACATP 96

[Close]

BLAST of EMLSAG00000001837 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.31 (protein:Tk01605 transcript:maker-scaffold381_size190066-snap-gene-0.31-mRNA-1 annotation:"hypothetical protein")

HSP 1 Score: 60.077 bits (144), Expect = 3.155e-12
Identity = 38/106 (35.85%), Postives = 51/106 (48.11%), Query Frame = 0

Query:    9 LLSAVLVGFSHSQDXQQAPAAAPAPGGE-DCNCQCMSLKFRDSRGTTYGNCEST-INGAQWCYVKYDRFSPCPDLQSSR-RFNG----RYWSNHACATPAENSPEC 107
            LL+ V    + +Q  +       AP    +C CQC    +RD+ G   GNC S     A WCY+    F+ C D++ SR R +     R WS  AC+TPA  SP C
Sbjct:   18 LLALVSSQITDTQVAESGDIVLKAPSNLINCGCQCDPYTWRDTLGRVQGNCRSADATKALWCYIPASAFTSCADIRQSRNRLDNFGRPRRWSYEACSTPALTSPIC 123

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BLAST of EMLSAG00000001837 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold82_size396747-snap-gene-2.41 (protein:Tk06844 transcript:maker-scaffold82_size396747-snap-gene-2.41-mRNA-1 annotation:"hypothetical protein")

HSP 1 Score: 56.225 bits (134), Expect = 1.565e-10
Identity = 36/96 (37.50%), Postives = 46/96 (47.92%), Query Frame = 0

Query:    6 TFILLSAVLVGFSHSQDXQQAPAAAPAPGGED-CNCQCMSLKFRDSRGTTYGNCESTINGAQWCYVKYDRFSPCPDLQSSRRFNGRYWSNHACATP 100
            T   L  V+VG         + A A +   +D C+CQC +  F+    T +GNC     GA WCYVK    S C D   S R +G +WS  AC TP
Sbjct:  216 TLAFLGEVVVGRCAILVKNASLAKAQSEITQDVCDCQCNNYTFK-FDNTLHGNCLQPYKGALWCYVKDFGQSTCIDRLESSRVSGLFWSFQACGTP 310

[Close]

BLAST of EMLSAG00000001837 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.30 (protein:Tk01607 transcript:maker-scaffold381_size190066-snap-gene-0.30-mRNA-1 annotation:"hypothetical protein AN3340.2")

HSP 1 Score: 53.9138 bits (128), Expect = 5.915e-10
Identity = 39/120 (32.50%), Postives = 56/120 (46.67%), Query Frame = 0

Query:    6 TFILLSAVLVGFSHSQ---------DXQQAPAAAPAPGGE-DCNCQCMSLKFRDSRGTTYGNC-ESTINGAQWCYVKYDRFS-PCPDLQSSRRF-----NGRYWSNHACATPAENSPECR 108
             F +LS VL   + +Q         D +       AP  +  CNCQC +  ++      +GNC  +    A+WCYV  D++S  C D+Q S+       N R WS  AC+TP   S +CR
Sbjct:    3 VFCILSTVLALTALTQAQDEAEDGVDTKSVEILQKAPSNQVSCNCQCDNYTYKGGDNQIHGNCFSADQTKAKWCYV--DQYSGECDDIQYSKNRRDSHGNLRKWSYQACSTPERASHQCR 120

[Close]

BLAST of EMLSAG00000001837 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.32 (protein:Tk01608 transcript:maker-scaffold381_size190066-snap-gene-0.32-mRNA-1 annotation:"---NA---")

HSP 1 Score: 46.9802 bits (110), Expect = 1.727e-7
Identity = 27/77 (35.06%), Postives = 42/77 (54.55%), Query Frame = 0

Query:   38 CNCQCMSLKFRDSRGTTYGNCESTING-AQWCYVKYDRFS-PCPDLQSSRRF-----NGRYWSNHACATPAENSPEC 107
            CNCQC +  ++      +GNC +  +   +WCY+  D+++  C D+Q S+       N R WS  AC+TP   SP+C
Sbjct:   47 CNCQCDNYTYKGDDNQIHGNCFTADHTRGKWCYL--DQYNNDCDDIQYSKNRRDSFGNLREWSYQACSTPQLGSPQC 121

The following BLAST results are available for this feature:

BLAST of EMLSAG00000001837 vs. GO
BLAST of EMLSAG00000001837 vs. C. finmarchicus
BLAST of EMLSAG00000001837 vs. L. salmonis peptides
BLAST of EMLSAG00000001837 vs. SwissProt
BLAST of EMLSAG00000001837 vs. Select Arthropod Genomes
BLAST of EMLSAG00000001837 vs. nr
BLAST of EMLSAG00000001837 vs. Tigriopus kingsejongenis genes

BLAST of EMLSAG00000001837 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000001837 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|592953585\|gb\|GAXK01004968.1\|	7.199e-17	37.84	TSA: Calanus finmarchicus comp348412_c0_seq1 trans...	[more]
gi\|592932365\|gb\|GAXK01026188.1\|	8.407e-14	53.73	TSA: Calanus finmarchicus comp18158_c2_seq13 trans...	[more]
gi\|592932379\|gb\|GAXK01026174.1\|	9.233e-14	51.39	TSA: Calanus finmarchicus comp18158_c1_seq4 transc...	[more]
gi\|592932366\|gb\|GAXK01026187.1\|	1.023e-13	53.73	TSA: Calanus finmarchicus comp18158_c2_seq12 trans...	[more]
gi\|592932370\|gb\|GAXK01026183.1\|	3.598e-13	53.73	TSA: Calanus finmarchicus comp18158_c2_seq8 transc...	[more]
gi\|592932375\|gb\|GAXK01026178.1\|	4.075e-13	53.73	TSA: Calanus finmarchicus comp18158_c2_seq3 transc...	[more]
gi\|592932373\|gb\|GAXK01026180.1\|	4.301e-13	53.73	TSA: Calanus finmarchicus comp18158_c2_seq5 transc...	[more]
gi\|592932371\|gb\|GAXK01026182.1\|	4.385e-13	53.73	TSA: Calanus finmarchicus comp18158_c2_seq7 transc...	[more]
gi\|592932374\|gb\|GAXK01026179.1\|	4.567e-13	53.73	TSA: Calanus finmarchicus comp18158_c2_seq4 transc...	[more]
gi\|592932372\|gb\|GAXK01026181.1\|	6.219e-13	53.73	TSA: Calanus finmarchicus comp18158_c2_seq6 transc...	[more]

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BLAST of EMLSAG00000001837 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 19


Match Name	E-value	Identity	Description
EMLSAP00000001837	4.541e-97	100.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s1318:7214...	[more]
EMLSAP00000001834	1.278e-57	72.06	pep:novel supercontig:LSalAtl2s:LSalAtl2s1318:3408...	[more]
EMLSAP00000000858	6.872e-54	61.94	pep:novel supercontig:LSalAtl2s:LSalAtl2s1146:1430...	[more]
EMLSAP00000000311	8.489e-53	69.12	pep:novel supercontig:LSalAtl2s:LSalAtl2s1046:2069...	[more]
EMLSAP00000000366	4.851e-26	47.12	pep:novel supercontig:LSalAtl2s:LSalAtl2s1053:5701...	[more]
EMLSAP00000002406	8.351e-24	51.28	pep:novel supercontig:LSalAtl2s:LSalAtl2s145:15811...	[more]
EMLSAP00000005911	6.945e-20	44.44	pep:novel supercontig:LSalAtl2s:LSalAtl2s31:133690...	[more]
EMLSAP00000001327	8.047e-19	51.32	pep:novel supercontig:LSalAtl2s:LSalAtl2s1223:2197...	[more]
EMLSAP00000012322	2.162e-12	41.49	pep:novel supercontig:LSalAtl2s:LSalAtl2s8:1311290...	[more]
EMLSAP00000007123	3.400e-12	41.84	pep:novel supercontig:LSalAtl2s:LSalAtl2s401:84241...	[more]

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BLAST of EMLSAG00000001837 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000001837 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000001837 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 2


Match Name	E-value	Identity	Description
gi\|155966304\|gb\|ABU41105.1\|	5.441e-25	48.08	hypothetical protein [Lepeophtheirus salmonis]	[more]
gi\|155966135\|gb\|ABU41022.1\|	6.913e-8	41.18	hypothetical protein [Lepeophtheirus salmonis]	[more]

BLAST of EMLSAG00000001837 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 4


Match Name	E-value	Identity	Description
maker-scaffold381_size190066-snap-gene-0.31	3.155e-12	35.85	protein:Tk01605 transcript:maker-scaffold381_size1...	[more]
maker-scaffold82_size396747-snap-gene-2.41	1.565e-10	37.50	protein:Tk06844 transcript:maker-scaffold82_size39...	[more]
maker-scaffold381_size190066-snap-gene-0.30	5.915e-10	32.50	protein:Tk01607 transcript:maker-scaffold381_size1...	[more]
maker-scaffold381_size190066-snap-gene-0.32	1.727e-7	35.06	protein:Tk01608 transcript:maker-scaffold381_size1...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s1318	supercontig	LSalAtl2s1318:72145..72812 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016
Blast vs. GO	2014-04-02
TblastN vs C. finmarchicus TSA	2014-05-09
Blastp vs. self	2014-05-10
Blastp vs. SwissProt	2017-02-10
Blastp vs. Selected Arthropods	2017-02-20
Blastp vs. NR (2/2017)	2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins	2018-04-18

Properties


Property Name	Value
Logic name	ensemblgenomes
Description	maker-LSalAtl2s1318-augustus-gene-0.12
Biotype	protein_coding
Evidence	IEA
Note	hypothetical protein [Lepeophtheirus salmonis]

Cross References

External references for this gene


Database	Accession
Ensembl Metazoa (gene)	EMLSAG00000001837 (primary cross-reference)

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
EMLSAT00000001837	EMLSAT00000001837-697684	Lepeophtheirus salmonis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at LSalAtl2s1318:72145..72812+

gene from alignment at LSalAtl2s1318:72145..72812+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAG00000001837-684603 ID=EMLSAG00000001837-684603|Name=EMLSAG00000001837|organism=Lepeophtheirus salmonis|type=gene|length=668bp|location=Sequence derived from alignment at LSalAtl2s1318:72145..72812+ (Lepeophtheirus salmonis)
AAATCAGTTCATTCCATTCTACTAGAAACTACTAATTAAAAATGTATCTT
GGAGTCACATTTATTCTCTTGAGTGCAGTCCTTGTGGGATTTTCTCATTC
ACAAGATGRCCAACAAGCKCCAGCAGCGGCTCCAGCCCCTGGAGGAGAAG
ACTGTAATTGTCAATGTATGTCTTTAAAATTCCGAGATTCGAGAGGAACC
ACATACGGAAACTGCGAGAGGTAAGTCAACGTATGGAAATATACCATCAT
TTTACTTCCTACTTTGCAGCACGATCAATGGAGCTCAGTGGTGCTATGTT
AAATATGATAGATTTAGCCCATGTCCTGATCTTCAATCATCCCGTCGTTT
CAACGGACGCTATTGGTCTAATCATGCCTGTGCAACTCCAGCTGAGAATT
CGCCTGAGTGCAGATTTTCTACTAGACCATCTGTTCCATTTGCWTCTTCR
CCAGCCTCTTCCGTTGCAAACAGTGGTGTCGCCGATGATGTCTTTTAATC
CTCTTTATCAGTTGTTTTCCTGTTTTAATGTAAAATATAGGATTAATTAA
TGTTTTTTTTTGTTTTTTAAAGTATAATATATTTCTCCAAAAATAAAATA
AAATGTTCTAAATTCAATTGCAGTTAAAAATGGTTAATCGATAATAAAAA
CTATTTCATTTTAGTCCC

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