EMLSAG00000000031, EMLSAG00000000031-682797 (gene) Lepeophtheirus salmonis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000031 vs. GO
Match: - (symbol:RNF168 "E3 ubiquitin-protein ligase RNF168" species:9913 "Bos taurus" [GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 Pfam:PF00097 PROSITE:PS50089 SMART:SM00184 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00730000111120 EMBL:DAAA02001689 Ensembl:ENSBTAT00000056454 ArrayExpress:G3X8D4 Uniprot:G3X8D4) HSP 1 Score: 58.9214 bits (141), Expect = 6.552e-10 Identity = 22/52 (42.31%), Postives = 34/52 (65.38%), Query Frame = 0
Query: 14 LNTECPACLSKPNDPIRLPCNHIICLTCYKRNIELTSLHCPLCKRRLSNWSR 65
L +C C+ +P+ LPCNH +C C++ +E SL CP C+RR+S+W+R
Sbjct: 12 LECQCQICVEILFEPVTLPCNHTLCKPCFESTVEKASLCCPFCRRRVSSWAR 63
BLAST of EMLSAG00000000031 vs. GO
Match: - (symbol:RNF168 "E3 ubiquitin-protein ligase RNF168" species:9913 "Bos taurus" [GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 Pfam:PF00097 PROSITE:PS50089 SMART:SM00184 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 RefSeq:NP_001069757.2 UniGene:Bt.6014 GeneID:613812 KEGG:bta:613812 CTD:165918 NextBio:20898785 OMA:HKQEEQD OrthoDB:EOG7XDBG8 TreeFam:TF332796 GeneTree:ENSGT00730000111120 EMBL:DAAA02001689 Ensembl:ENSBTAT00000017712 ArrayExpress:F1MSN8 Uniprot:F1MSN8) HSP 1 Score: 60.8474 bits (146), Expect = 1.046e-9 Identity = 22/52 (42.31%), Postives = 34/52 (65.38%), Query Frame = 0
Query: 14 LNTECPACLSKPNDPIRLPCNHIICLTCYKRNIELTSLHCPLCKRRLSNWSR 65
L +C C+ +P+ LPCNH +C C++ +E SL CP C+RR+S+W+R
Sbjct: 12 LECQCQICVEILFEPVTLPCNHTLCKPCFESTVEKASLCCPFCRRRVSSWAR 63
BLAST of EMLSAG00000000031 vs. GO
Match: - (symbol:RNF168 "E3 ubiquitin-protein ligase RNF168" species:9913 "Bos taurus" [GO:0000151 "ubiquitin ligase complex" evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=ISS] [GO:0006974 "cellular response to DNA damage stimulus" evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010212 "response to ionizing radiation" evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0035518 "histone H2A monoubiquitination" evidence=ISS] [GO:0035861 "site of double-strand break" evidence=ISS] [GO:0036351 "histone H2A-K13 ubiquitination" evidence=ISS] [GO:0036352 "histone H2A-K15 ubiquitination" evidence=ISS] [GO:0042393 "histone binding" evidence=ISS] [GO:0043130 "ubiquitin binding" evidence=ISS] [GO:0045190 "isotype switching" evidence=ISS] [GO:0045739 "positive regulation of DNA repair" evidence=ISS] [GO:0045900 "negative regulation of translational elongation" evidence=ISS] [GO:0070530 "K63-linked polyubiquitin binding" evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination" evidence=ISS] [GO:0070535 "histone H2A K63-linked ubiquitination" evidence=ISS] InterPro:IPR001841 InterPro:IPR018957 Pfam:PF00097 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0008270 GO:GO:0003682 GO:GO:0010212 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006302 GO:GO:0006511 GO:GO:0045190 GO:GO:0004842 GO:GO:0042393 GO:GO:0045739 GO:GO:0035861 GO:GO:0000151 GO:GO:0035518 GO:GO:0045900 GO:GO:0070530 EMBL:AAFC03087522 EMBL:AAFC03087524 EMBL:BC122577 RefSeq:NP_001069757.2 UniGene:Bt.6014 STRING:9913.ENSBTAP00000017712 GeneID:613812 KEGG:bta:613812 CTD:165918 eggNOG:NOG240923 HOGENOM:HOG000154156 HOVERGEN:HBG067220 InParanoid:Q0IIM1 NextBio:20898785 GO:GO:0070535 GO:GO:0036351 GO:GO:0036352 Uniprot:Q0IIM1) HSP 1 Score: 60.8474 bits (146), Expect = 1.065e-9 Identity = 22/52 (42.31%), Postives = 34/52 (65.38%), Query Frame = 0
Query: 14 LNTECPACLSKPNDPIRLPCNHIICLTCYKRNIELTSLHCPLCKRRLSNWSR 65
L +C C+ +P+ LPCNH +C C++ +E SL CP C+RR+S+W+R
Sbjct: 12 LECQCQICVEILFEPVTLPCNHTLCKPCFESTVEKASLCCPFCRRRVSSWAR 63
BLAST of EMLSAG00000000031 vs. GO
Match: - (symbol:E1BSL1 "Uncharacterized protein" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006302 "double-strand break repair" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010212 "response to ionizing radiation" evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA] [GO:0035518 "histone H2A monoubiquitination" evidence=IEA] [GO:0035861 "site of double-strand break" evidence=IEA] [GO:0036351 "histone H2A-K13 ubiquitination" evidence=IEA] [GO:0036352 "histone H2A-K15 ubiquitination" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA] [GO:0045190 "isotype switching" evidence=IEA] [GO:0045739 "positive regulation of DNA repair" evidence=IEA] [GO:0045900 "negative regulation of translational elongation" evidence=IEA] [GO:0070530 "K63-linked polyubiquitin binding" evidence=IEA] [GO:0070535 "histone H2A K63-linked ubiquitination" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 Pfam:PF00097 PROSITE:PS50089 SMART:SM00184 GO:GO:0005634 GO:GO:0008270 GO:GO:0003682 GO:GO:0010212 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006302 GO:GO:0006511 GO:GO:0045190 GO:GO:0004842 GO:GO:0045739 GO:GO:0035861 GO:GO:0000151 GO:GO:0035518 GO:GO:0045900 GO:GO:0070535 GO:GO:0036351 GO:GO:0036352 OMA:HKQEEQD OrthoDB:EOG7XDBG8 TreeFam:TF332796 GeneTree:ENSGT00730000111120 EMBL:AADN03005846 Ensembl:ENSGALT00000010322 PRO:PR:E1BSL1 Uniprot:E1BSL1) HSP 1 Score: 60.4622 bits (145), Expect = 1.251e-9 Identity = 22/48 (45.83%), Postives = 33/48 (68.75%), Query Frame = 0
Query: 18 CPACLSKPNDPIRLPCNHIICLTCYKRNIELTSLHCPLCKRRLSNWSR 65
C C+ +P+ LPCNH IC +C++ +E SL CP C+RR+S+W+R
Sbjct: 16 CQICMEVFVEPVTLPCNHTICNSCFQLTVENASLCCPFCRRRVSSWAR 63
BLAST of EMLSAG00000000031 vs. GO
Match: - (symbol:RNF168 "E3 ubiquitin-protein ligase RNF168" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC092933 EMBL:AC117490 HGNC:HGNC:26661 ProteinModelPortal:F8WD60 SMR:F8WD60 Ensembl:ENST00000437070 NextBio:35513939 ArrayExpress:F8WD60 Bgee:F8WD60 Uniprot:F8WD60) HSP 1 Score: 56.9954 bits (136), Expect = 1.296e-9 Identity = 27/71 (38.03%), Postives = 43/71 (60.56%), Query Frame = 0
Query: 17 ECPACLSKPNDPIRLPCNHIICLTCYKRNIELTSLHCPLCKRRLSNWSRSINTNGGPKVDPVVKRWLMTQK 87
+C C+ +P+ LPCNH +C C++ +E SL CP C+RR+S+W+R +T V+ V+ W + QK
Sbjct: 15 QCGICMEILVEPVTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVSSWTR-YHTRRNSLVN--VELWTIIQK 82
BLAST of EMLSAG00000000031 vs. GO
Match: - (symbol:RNF168 "E3 ubiquitin-protein ligase RNF168" species:9606 "Homo sapiens" [GO:0000151 "ubiquitin ligase complex" evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0006302 "double-strand break repair" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=IDA] [GO:0006974 "cellular response to DNA damage stimulus" evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010212 "response to ionizing radiation" evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031491 "nucleosome binding" evidence=IDA] [GO:0035518 "histone H2A monoubiquitination" evidence=IDA] [GO:0035861 "site of double-strand break" evidence=IDA] [GO:0036297 "interstrand cross-link repair" evidence=TAS] [GO:0036351 "histone H2A-K13 ubiquitination" evidence=IDA] [GO:0036352 "histone H2A-K15 ubiquitination" evidence=IDA] [GO:0042393 "histone binding" evidence=IDA] [GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0045190 "isotype switching" evidence=ISS] [GO:0045739 "positive regulation of DNA repair" evidence=IDA] [GO:0045900 "negative regulation of translational elongation" evidence=IMP] [GO:0070530 "K63-linked polyubiquitin binding" evidence=IDA] [GO:0070534 "protein K63-linked ubiquitination" evidence=IDA] [GO:0070535 "histone H2A K63-linked ubiquitination" evidence=IMP;IDA] [GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0008270 GO:GO:0010212 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006302 GO:GO:0006511 GO:GO:0045190 GO:GO:0004842 GO:GO:0042393 GO:GO:0045739 GO:GO:0035861 GO:GO:0000151 GO:GO:0031491 GO:GO:0035518 GO:GO:0036297 GO:GO:0045900 GO:GO:0070530 EMBL:AC092933 CTD:165918 HOGENOM:HOG000154156 HOVERGEN:HBG067220 GO:GO:0070535 GO:GO:0036351 GO:GO:0036352 eggNOG:NOG292819 EMBL:AK054732 EMBL:AK093113 EMBL:AC117490 EMBL:BC033791 RefSeq:NP_689830.2 UniGene:Hs.250648 PDB:3L11 PDB:4GB0 PDBsum:3L11 PDBsum:4GB0 ProteinModelPortal:Q8IYW5 SMR:Q8IYW5 BioGrid:127922 DIP:DIP-37451N IntAct:Q8IYW5 MINT:MINT-1180501 STRING:9606.ENSP00000320898 PhosphoSite:Q8IYW5 DMDM:74762499 PaxDb:Q8IYW5 PRIDE:Q8IYW5 Ensembl:ENST00000318037 GeneID:165918 KEGG:hsa:165918 UCSC:uc003fwq.3 GeneCards:GC03M196195 HGNC:HGNC:26661 HPA:HPA053739 MIM:611943 MIM:612688 neXtProt:NX_Q8IYW5 PharmGKB:PA134945219 InParanoid:Q8IYW5 OMA:HKQEEQD OrthoDB:EOG7XDBG8 PhylomeDB:Q8IYW5 TreeFam:TF332796 EvolutionaryTrace:Q8IYW5 GenomeRNAi:165918 NextBio:88572 PRO:PR:Q8IYW5 ArrayExpress:Q8IYW5 Bgee:Q8IYW5 CleanEx:HS_RNF168 Genevestigator:Q8IYW5 Uniprot:Q8IYW5) HSP 1 Score: 60.077 bits (144), Expect = 1.697e-9 Identity = 34/113 (30.09%), Postives = 60/113 (53.10%), Query Frame = 0
Query: 17 ECPACLSKPNDPIRLPCNHIICLTCYKRNIELTSLHCPLCKRRLSNWSRSINTNGGPKVDPVVKRWLMTQK--PQTSKRKRVSKVSSTSSD------------SIKKDFEQEI 115
+C C+ +P+ LPCNH +C C++ +E SL CP C+RR+S+W+R +T V+ V+ W + QK P+ K + + S +D +++++E+EI
Sbjct: 15 QCGICMEILVEPVTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVSSWTR-YHTRRNSLVN--VELWTIIQKHYPRECKLRASGQESEEVADDYQPVRLLSKPGELRREYEEEI 124
BLAST of EMLSAG00000000031 vs. GO
Match: - (symbol:rnf213a "ring finger protein 213a" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0002040 "sprouting angiogenesis" evidence=IMP] [GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 ZFIN:ZDB-GENE-050302-100 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0002040 InterPro:IPR017907 GeneTree:ENSGT00630000089884 OrthoDB:EOG7S21WZ EMBL:AL953879 EMBL:CABZ01009732 EMBL:CR759836 EMBL:CT573461 Ensembl:ENSDART00000108501 OMA:EESEFIP Bgee:E7F7V0 Uniprot:E7F7V0) HSP 1 Score: 58.5362 bits (140), Expect = 6.161e-9 Identity = 20/39 (51.28%), Postives = 27/39 (69.23%), Query Frame = 0
Query: 18 CPACLSKPNDPIRLPCNHIICLTCYKRNIELTSLHCPLC 56
CP C+ P DP+ LPC+HI CLTC ++ + +HCPLC
Sbjct: 553 CPVCMGDPRDPLSLPCDHIYCLTCIRQWLVPGQMHCPLC 591
BLAST of EMLSAG00000000031 vs. GO
Match: - (symbol:Rnf168 "ring finger protein 168" species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex" evidence=ISO] [GO:0003682 "chromatin binding" evidence=ISO] [GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005739 "mitochondrion" evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302 "double-strand break repair" evidence=ISO] [GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=ISO] [GO:0006974 "cellular response to DNA damage stimulus" evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010212 "response to ionizing radiation" evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016568 "chromatin modification" evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA] [GO:0031491 "nucleosome binding" evidence=ISO] [GO:0035518 "histone H2A monoubiquitination" evidence=ISO] [GO:0035861 "site of double-strand break" evidence=ISO] [GO:0036351 "histone H2A-K13 ubiquitination" evidence=ISO] [GO:0036352 "histone H2A-K15 ubiquitination" evidence=ISO] [GO:0042393 "histone binding" evidence=ISO] [GO:0043130 "ubiquitin binding" evidence=ISO] [GO:0045190 "isotype switching" evidence=IMP] [GO:0045739 "positive regulation of DNA repair" evidence=ISO] [GO:0045900 "negative regulation of translational elongation" evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA] [GO:0070530 "K63-linked polyubiquitin binding" evidence=ISO] [GO:0070534 "protein K63-linked ubiquitination" evidence=ISO] [GO:0070535 "histone H2A K63-linked ubiquitination" evidence=ISO] InterPro:IPR001841 InterPro:IPR018957 Pfam:PF00097 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:1917488 GO:GO:0005634 GO:GO:0008270 GO:GO:0003682 GO:GO:0010212 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006302 GO:GO:0006511 GO:GO:0045190 GO:GO:0004842 GO:GO:0042393 GO:GO:0045739 GO:GO:0035861 GO:GO:0000151 GO:GO:0035518 GO:GO:0045900 GO:GO:0070530 CTD:165918 HOGENOM:HOG000154156 HOVERGEN:HBG067220 GO:GO:0070535 GO:GO:0036351 GO:GO:0036352 eggNOG:NOG292819 OrthoDB:EOG7XDBG8 EMBL:AC126265 EMBL:BC046815 RefSeq:NP_081631.2 UniGene:Mm.228263 ProteinModelPortal:Q80XJ2 SMR:Q80XJ2 STRING:10090.ENSMUSP00000014218 PhosphoSite:Q80XJ2 PRIDE:Q80XJ2 Ensembl:ENSMUST00000014218 GeneID:70238 KEGG:mmu:70238 GeneTree:ENSGT00730000111120 InParanoid:Q80XJ2 NextBio:331230 PRO:PR:Q80XJ2 ArrayExpress:Q80XJ2 Bgee:Q80XJ2 CleanEx:MM_RNF168 Genevestigator:Q80XJ2 Uniprot:Q80XJ2) HSP 1 Score: 58.151 bits (139), Expect = 6.831e-9 Identity = 20/49 (40.82%), Postives = 33/49 (67.35%), Query Frame = 0
Query: 17 ECPACLSKPNDPIRLPCNHIICLTCYKRNIELTSLHCPLCKRRLSNWSR 65
+C C+ +P+ LPCNH +C C++ +E +L CP C+RR+S+W+R
Sbjct: 15 QCGICMEILLEPVTLPCNHTLCNPCFQSTVEKANLCCPFCRRRVSSWTR 63
BLAST of EMLSAG00000000031 vs. GO
Match: - (symbol:Rnf168 "ring finger protein 168, E3 ubiquitin protein ligase" species:10116 "Rattus norvegicus" [GO:0000151 "ubiquitin ligase complex" evidence=ISO;ISS] [GO:0003682 "chromatin binding" evidence=ISO;ISS] [GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005739 "mitochondrion" evidence=ISO] [GO:0006302 "double-strand break repair" evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=ISO;ISS] [GO:0006974 "cellular response to DNA damage stimulus" evidence=ISO;ISS] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010212 "response to ionizing radiation" evidence=ISO;ISS] [GO:0016567 "protein ubiquitination" evidence=ISO;ISS] [GO:0031491 "nucleosome binding" evidence=IEA;ISO] [GO:0035518 "histone H2A monoubiquitination" evidence=ISO;ISS] [GO:0035861 "site of double-strand break" evidence=ISO;ISS] [GO:0036351 "histone H2A-K13 ubiquitination" evidence=ISO;ISS] [GO:0036352 "histone H2A-K15 ubiquitination" evidence=ISO;ISS] [GO:0042393 "histone binding" evidence=ISO;ISS] [GO:0043130 "ubiquitin binding" evidence=ISO;ISS] [GO:0045190 "isotype switching" evidence=ISO;ISS] [GO:0045739 "positive regulation of DNA repair" evidence=ISO;ISS] [GO:0045900 "negative regulation of translational elongation" evidence=ISO;ISS] [GO:0070530 "K63-linked polyubiquitin binding" evidence=ISO;ISS] [GO:0070534 "protein K63-linked ubiquitination" evidence=ISO;ISS] [GO:0070535 "histone H2A K63-linked ubiquitination" evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR001841 InterPro:IPR018957 Pfam:PF00097 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 RGD:1585168 GO:GO:0005634 GO:GO:0008270 GO:GO:0003682 GO:GO:0010212 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006302 GO:GO:0006511 GO:GO:0045190 GO:GO:0004842 GO:GO:0042393 GO:GO:0045739 GO:GO:0035861 GO:GO:0000151 GO:GO:0035518 GO:GO:0045900 GO:GO:0070530 CTD:165918 HOGENOM:HOG000154156 HOVERGEN:HBG067220 GO:GO:0070535 GO:GO:0036351 GO:GO:0036352 eggNOG:NOG292819 OMA:HKQEEQD OrthoDB:EOG7XDBG8 GeneTree:ENSGT00730000111120 EMBL:BC166869 RefSeq:NP_001121069.2 UniGene:Rn.101441 ProteinModelPortal:B2RYR0 STRING:10116.ENSRNOP00000002395 PaxDb:B2RYR0 PRIDE:B2RYR0 Ensembl:ENSRNOT00000002395 GeneID:690043 KEGG:rno:690043 UCSC:RGD:1585168 NextBio:740065 Genevestigator:B2RYR0 Uniprot:B2RYR0) HSP 1 Score: 58.151 bits (139), Expect = 7.472e-9 Identity = 20/49 (40.82%), Postives = 33/49 (67.35%), Query Frame = 0
Query: 17 ECPACLSKPNDPIRLPCNHIICLTCYKRNIELTSLHCPLCKRRLSNWSR 65
+C C+ +P+ LPCNH +C C++ +E +L CP C+RR+S+W+R
Sbjct: 15 QCGICMEILVEPVTLPCNHTLCNPCFQSTVEKANLCCPFCRRRVSSWTR 63
BLAST of EMLSAG00000000031 vs. GO
Match: - (symbol:RNF168 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006302 "double-strand break repair" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010212 "response to ionizing radiation" evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA] [GO:0035518 "histone H2A monoubiquitination" evidence=IEA] [GO:0035861 "site of double-strand break" evidence=IEA] [GO:0036351 "histone H2A-K13 ubiquitination" evidence=IEA] [GO:0036352 "histone H2A-K15 ubiquitination" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA] [GO:0045190 "isotype switching" evidence=IEA] [GO:0045739 "positive regulation of DNA repair" evidence=IEA] [GO:0045900 "negative regulation of translational elongation" evidence=IEA] [GO:0070530 "K63-linked polyubiquitin binding" evidence=IEA] [GO:0070535 "histone H2A K63-linked ubiquitination" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 Pfam:PF00097 PROSITE:PS50089 SMART:SM00184 GO:GO:0005634 GO:GO:0008270 GO:GO:0003682 GO:GO:0010212 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006302 GO:GO:0006511 GO:GO:0045190 GO:GO:0004842 GO:GO:0045739 GO:GO:0035861 GO:GO:0000151 GO:GO:0035518 GO:GO:0045900 CTD:165918 GO:GO:0070535 GO:GO:0036351 GO:GO:0036352 OMA:HKQEEQD OrthoDB:EOG7XDBG8 TreeFam:TF332796 GeneTree:ENSGT00730000111120 EMBL:AAEX03017096 RefSeq:XP_545152.1 ProteinModelPortal:E2R9S2 Ensembl:ENSCAFT00000020652 GeneID:488029 KEGG:cfa:488029 NextBio:20861476 Uniprot:E2R9S2) HSP 1 Score: 57.7658 bits (138), Expect = 1.068e-8 Identity = 21/49 (42.86%), Postives = 32/49 (65.31%), Query Frame = 0
Query: 17 ECPACLSKPNDPIRLPCNHIICLTCYKRNIELTSLHCPLCKRRLSNWSR 65
+C C+ +PI LPC H +C C++ +E SL CP C+RR+S+W+R
Sbjct: 15 QCRICVDILVEPITLPCGHTLCSPCFQATVEKASLCCPFCRRRVSSWTR 63
BLAST of EMLSAG00000000031 vs. C. finmarchicus
Match: gi|592797610|gb|GAXK01156958.1| (TSA: Calanus finmarchicus comp2487612_c0_seq1 transcribed RNA sequence) HSP 1 Score: 67.781 bits (164), Expect = 1.390e-12 Identity = 24/48 (50.00%), Postives = 37/48 (77.08%), Query Frame = 0
Query: 18 CPACLSKPNDPIRLPCNHIICLTCYKRNIELTSLHCPLCKRRLSNWSR 65
CP CLS +P+R+PC HI+C+TC+ N++ +SL CP+C+ R+S+W R
Sbjct: 197 CPICLSIYIEPVRMPCAHILCMTCFTSNVDQSSLCCPICRARISSWCR 340
BLAST of EMLSAG00000000031 vs. C. finmarchicus
Match: gi|592810865|gb|GAXK01143703.1| (TSA: Calanus finmarchicus comp4130355_c0_seq1 transcribed RNA sequence) HSP 1 Score: 41.5874 bits (96), Expect = 1.856e-4 Identity = 18/46 (39.13%), Postives = 25/46 (54.35%), Query Frame = 0
Query: 15 NTECPACLSKPNDPIRLPCNHIICLTCYKRNIELTSLHCPLCKRRL 60
+ EC CL P++LPCNHI C C K + S C +C+R +
Sbjct: 112 SIECAVCLQSCVYPVQLPCNHIFCFLCIK-GVTTQSTRCAMCRRDI 246
BLAST of EMLSAG00000000031 vs. C. finmarchicus
Match: gi|592879251|gb|GAXK01078650.1| (TSA: Calanus finmarchicus comp208716_c3_seq1 transcribed RNA sequence) HSP 1 Score: 41.9726 bits (97), Expect = 5.446e-4 Identity = 25/70 (35.71%), Postives = 34/70 (48.57%), Query Frame = 0
Query: 16 TECPACLSKPNDPIRLPC---NHIICLTCYKRNIELTSLHCPLCKRRLSNWSRSINTNGGPKVDPVVKRW 82
ECP C + P D + +PC HI+C TC R LHCP C+R+L + + S+ KV W
Sbjct: 865 VECPVCYNIPRD-LPIPCCPAGHIMCTTCRGR-----VLHCPTCRRQLEDNTSSLAAALIEKVQHKCLHW 1056
BLAST of EMLSAG00000000031 vs. C. finmarchicus
Match: gi|592813230|gb|GAXK01141338.1| (TSA: Calanus finmarchicus comp190212_c2_seq10 transcribed RNA sequence) HSP 1 Score: 41.5874 bits (96), Expect = 9.472e-4 Identity = 17/53 (32.08%), Postives = 29/53 (54.72%), Query Frame = 0
Query: 11 KPPLNTECPACLSKPNDPIRLPCNHIICLTCYKRNIE-LTSLHCPLCKRRLSN 62
+ ++ +C CL P+ PC H+ C TC +R +E + CPLC+ ++ N
Sbjct: 1803 RSGVSDDCSVCLDDLTTPVITPCAHVFCRTCIERVLEAIKPPTCPLCRNKIDN 1961
BLAST of EMLSAG00000000031 vs. C. finmarchicus
Match: gi|592813237|gb|GAXK01141331.1| (TSA: Calanus finmarchicus comp190212_c2_seq3 transcribed RNA sequence) HSP 1 Score: 41.5874 bits (96), Expect = 9.819e-4 Identity = 17/53 (32.08%), Postives = 29/53 (54.72%), Query Frame = 0
Query: 11 KPPLNTECPACLSKPNDPIRLPCNHIICLTCYKRNIE-LTSLHCPLCKRRLSN 62
+ ++ +C CL P+ PC H+ C TC +R +E + CPLC+ ++ N
Sbjct: 2904 RSGVSDDCSVCLDDLTTPVITPCAHVFCRTCIERVLEAIKPPTCPLCRNKIDN 3062
BLAST of EMLSAG00000000031 vs. C. finmarchicus
Match: gi|592897518|gb|GAXK01060857.1| (TSA: Calanus finmarchicus comp173373_c0_seq1 transcribed RNA sequence) HSP 1 Score: 38.891 bits (89), Expect = 1.760e-3 Identity = 17/46 (36.96%), Postives = 24/46 (52.17%), Query Frame = 0
Query: 15 NTECPACLSKPNDPIRLPCNHIICLTCYKRNIELTSLHCPLCKRRL 60
+ EC CL P++LPC HI C C K + S C +C+R +
Sbjct: 115 SIECAVCLQTCVYPVQLPCKHIFCFLCVK-GVTTQSKRCAMCRREI 249
BLAST of EMLSAG00000000031 vs. C. finmarchicus
Match: gi|592773079|gb|GAXK01181489.1| (TSA: Calanus finmarchicus comp128618_c0_seq1 transcribed RNA sequence) HSP 1 Score: 40.0466 bits (92), Expect = 2.582e-3 Identity = 22/46 (47.83%), Postives = 25/46 (54.35%), Query Frame = 0
Query: 15 NTECPACLSKPNDPI-RLPCNHIICLTCYKRNIELTSLHCPLCKRR 59
+ ECP C S P+ PI R P HIIC TC R S CP C+ R
Sbjct: 174 SIECPVCYSVPSPPIYRCPNEHIICSTCLPR----LSSKCPTCRTR 299
BLAST of EMLSAG00000000031 vs. C. finmarchicus
Match: gi|592934096|gb|GAXK01024457.1| (TSA: Calanus finmarchicus comp685879_c0_seq1 transcribed RNA sequence) HSP 1 Score: 40.0466 bits (92), Expect = 3.452e-3 Identity = 21/64 (32.81%), Postives = 30/64 (46.88%), Query Frame = 0
Query: 18 CPACLSKPND---PIRLPCNHIICLTCYKRNIELTSLH-CPLCKRRLSNWSRSINTNGGPKVDP 77
C C+ ND P+R CNHI C TC ++ T + CP C+ ++ +R GP P
Sbjct: 2394 CTICMKDSNDLVEPVRTSCNHIFCWTCIYEYVDSTKEYSCPNCRSLITRVARVSAEGVGPPRSP 2585
BLAST of EMLSAG00000000031 vs. C. finmarchicus
Match: gi|592861455|gb|GAXK01096107.1| (TSA: Calanus finmarchicus comp54982_c2_seq1 transcribed RNA sequence) HSP 1 Score: 38.891 bits (89), Expect = 6.269e-3 Identity = 18/51 (35.29%), Postives = 23/51 (45.10%), Query Frame = 0
Query: 12 PPLNTECPACLSKPNDPIRLPCNHIICLTCYKRNIELTS--LHCPLCKRRL 60
P EC CL P P+ LPC HI C C K +C LC++ +
Sbjct: 516 PRTYDECSVCLDPPVHPVTLPCTHIFCYLCAKGLTRQAGQLANCSLCRKDI 668
BLAST of EMLSAG00000000031 vs. C. finmarchicus
Match: gi|592943871|gb|GAXK01014682.1| (TSA: Calanus finmarchicus comp9898_c3_seq1 transcribed RNA sequence) HSP 1 Score: 36.5798 bits (83), Expect = 4.703e-2 Identity = 16/47 (34.04%), Postives = 27/47 (57.45%), Query Frame = 0
Query: 18 CPACLSKPNDPIRL-PCNHIICLTCYKRNIELTSLH--CPLCKRRLS 61
CP CL ++P ++ PC HI C C +R + ++ CPLC+ ++
Sbjct: 786 CPVCLDLLHEPFQVEPCGHIFCEPCLRRLGQKNPMNCTCPLCRTKIG 926
BLAST of EMLSAG00000000031 vs. L. salmonis peptides
Match: EMLSAP00000000031 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1006:149120:150851:1 gene:EMLSAG00000000031 transcript:EMLSAT00000000031 description:"maker-LSalAtl2s1006-snap-gene-1.26") HSP 1 Score: 392.119 bits (1006), Expect = 4.415e-140 Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0
Query: 1 MPNTSKVRIKKPPLNTECPACLSKPNDPIRLPCNHIICLTCYKRNIELTSLHCPLCKRRLSNWSRSINTNGGPKVDPVVKRWLMTQKPQTSKRKRVSKVSSTSSDSIKKDFEQEILHFRNKENTNHDEDNPDEIASMFSTDIEEQKQIEQRLLREREDARIALALNNSFRGVVDRSKNSPDAYSLRSKRMA 191
MPNTSKVRIKKPPLNTECPACLSKPNDPIRLPCNHIICLTCYKRNIELTSLHCPLCKRRLSNWSRSINTNGGPKVDPVVKRWLMTQKPQTSKRKRVSKVSSTSSDSIKKDFEQEILHFRNKENTNHDEDNPDEIASMFSTDIEEQKQIEQRLLREREDARIALALNNSFRGVVDRSKNSPDAYSLRSKRMA
Sbjct: 1 MPNTSKVRIKKPPLNTECPACLSKPNDPIRLPCNHIICLTCYKRNIELTSLHCPLCKRRLSNWSRSINTNGGPKVDPVVKRWLMTQKPQTSKRKRVSKVSSTSSDSIKKDFEQEILHFRNKENTNHDEDNPDEIASMFSTDIEEQKQIEQRLLREREDARIALALNNSFRGVVDRSKNSPDAYSLRSKRMA 191
BLAST of EMLSAG00000000031 vs. L. salmonis peptides
Match: EMLSAP00000003555 (pep:novel supercontig:LSalAtl2s:LSalAtl2s194:299479:300928:-1 gene:EMLSAG00000003555 transcript:EMLSAT00000003555 description:"maker-LSalAtl2s194-snap-gene-3.26") HSP 1 Score: 65.0846 bits (157), Expect = 1.788e-13 Identity = 26/48 (54.17%), Postives = 33/48 (68.75%), Query Frame = 0
Query: 18 CPACLSKPNDPIRLPCNHIICLTCYKRNIELTSLHCPLCKRRLSNWSR 65
CP CL +PI LPC H +C C+ N+ELTSL CPLCK+R+ W+R
Sbjct: 19 CPICLYIFVEPILLPCQHRLCGPCFHSNLELTSLSCPLCKKRVGTWAR 66
BLAST of EMLSAG00000000031 vs. L. salmonis peptides
Match: EMLSAP00000001679 (pep:novel supercontig:LSalAtl2s:LSalAtl2s128:785306:785989:1 gene:EMLSAG00000001679 transcript:EMLSAT00000001679 description:"augustus_masked-LSalAtl2s128-processed-gene-7.10") HSP 1 Score: 56.9954 bits (136), Expect = 1.766e-10 Identity = 27/57 (47.37%), Postives = 33/57 (57.89%), Query Frame = 0
Query: 6 KVRIKKP-PLNTECPACLSKPNDPIRLPCNHIICLTCYKRNIELTSLHCPLCKRRLS 61
+V IK P P ECP CL K PI+LPCNHI C C K + CP+C+R +S
Sbjct: 4 EVEIKSPSPSPLECPVCLQKAVQPIKLPCNHIFCFLCVK-GASAQNQACPMCRRPIS 59
BLAST of EMLSAG00000000031 vs. SwissProt
Match: gi|391359341|sp|E7FAP1.1|RN169_DANRE (RecName: Full=E3 ubiquitin-protein ligase RNF169; AltName: Full=RING finger protein 169) HSP 1 Score: 62.003 bits (149), Expect = 2.400e-10 Identity = 25/56 (44.64%), Postives = 38/56 (67.86%), Query Frame = 0
Query: 13 PLNTE---CPACLSKPNDPIRLPCNHIICLTCYKRNIELTSLHCPLCKRRLSNWSR 65
PL+ E CP C +P+ +PC H +CL C++R ++L SL CPLC+ R+S+W+R
Sbjct: 28 PLSLEEARCPVCSEILLEPVTMPCGHSVCLHCFQRTVKLISLCCPLCRLRVSSWAR 83
BLAST of EMLSAG00000000031 vs. SwissProt
Match: gi|229564319|sp|Q0IIM1.2|RN168_BOVIN (RecName: Full=E3 ubiquitin-protein ligase RNF168; AltName: Full=RING finger protein 168) HSP 1 Score: 60.8474 bits (146), Expect = 6.479e-10 Identity = 22/52 (42.31%), Postives = 34/52 (65.38%), Query Frame = 0
Query: 14 LNTECPACLSKPNDPIRLPCNHIICLTCYKRNIELTSLHCPLCKRRLSNWSR 65
L +C C+ +P+ LPCNH +C C++ +E SL CP C+RR+S+W+R
Sbjct: 12 LECQCQICVEILFEPVTLPCNHTLCKPCFESTVEKASLCCPFCRRRVSSWAR 63
BLAST of EMLSAG00000000031 vs. SwissProt
Match: gi|74762499|sp|Q8IYW5.1|RN168_HUMAN (RecName: Full=E3 ubiquitin-protein ligase RNF168; Short=hRNF168; AltName: Full=RING finger protein 168) HSP 1 Score: 60.077 bits (144), Expect = 1.060e-9 Identity = 34/113 (30.09%), Postives = 60/113 (53.10%), Query Frame = 0
Query: 17 ECPACLSKPNDPIRLPCNHIICLTCYKRNIELTSLHCPLCKRRLSNWSRSINTNGGPKVDPVVKRWLMTQK--PQTSKRKRVSKVSSTSSD------------SIKKDFEQEI 115
+C C+ +P+ LPCNH +C C++ +E SL CP C+RR+S+W+R +T V+ V+ W + QK P+ K + + S +D +++++E+EI
Sbjct: 15 QCGICMEILVEPVTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVSSWTR-YHTRRNSLVN--VELWTIIQKHYPRECKLRASGQESEEVADDYQPVRLLSKPGELRREYEEEI 124
BLAST of EMLSAG00000000031 vs. SwissProt
Match: gi|1008808717|sp|A0A0R4IBK5.1|R213A_DANRE (RecName: Full=E3 ubiquitin-protein ligase rnf213-alpha; AltName: Full=Mysterin-A; AltName: Full=Mysterin-alpha; AltName: Full=RING finger protein 213-A; AltName: Full=RING finger protein 213-alpha; AltName: Full=RING-type E3 ubiquitin transferase rnf213-alpha) HSP 1 Score: 58.9214 bits (141), Expect = 3.006e-9 Identity = 20/43 (46.51%), Postives = 29/43 (67.44%), Query Frame = 0
Query: 18 CPACLSKPNDPIRLPCNHIICLTCYKRNIELTSLHCPLCKRRL 60
CP C+ P DP+ LPC+HI CLTC ++ + +HCPLC + +
Sbjct: 4005 CPVCMGDPRDPLSLPCDHIYCLTCIRQWLVPGQMHCPLCVQEV 4047
BLAST of EMLSAG00000000031 vs. SwissProt
Match: gi|229564320|sp|Q80XJ2.3|RN168_MOUSE (RecName: Full=E3 ubiquitin-protein ligase RNF168; AltName: Full=RING finger protein 168) HSP 1 Score: 58.151 bits (139), Expect = 4.598e-9 Identity = 20/49 (40.82%), Postives = 33/49 (67.35%), Query Frame = 0
Query: 17 ECPACLSKPNDPIRLPCNHIICLTCYKRNIELTSLHCPLCKRRLSNWSR 65
+C C+ +P+ LPCNH +C C++ +E +L CP C+RR+S+W+R
Sbjct: 15 QCGICMEILLEPVTLPCNHTLCNPCFQSTVEKANLCCPFCRRRVSSWTR 63
BLAST of EMLSAG00000000031 vs. SwissProt
Match: gi|229564317|sp|B2RYR0.1|RN168_RAT (RecName: Full=E3 ubiquitin-protein ligase RNF168; AltName: Full=RING finger protein 168) HSP 1 Score: 58.151 bits (139), Expect = 5.053e-9 Identity = 20/49 (40.82%), Postives = 33/49 (67.35%), Query Frame = 0
Query: 17 ECPACLSKPNDPIRLPCNHIICLTCYKRNIELTSLHCPLCKRRLSNWSR 65
+C C+ +P+ LPCNH +C C++ +E +L CP C+RR+S+W+R
Sbjct: 15 QCGICMEILVEPVTLPCNHTLCNPCFQSTVEKANLCCPFCRRRVSSWTR 63
BLAST of EMLSAG00000000031 vs. SwissProt
Match: gi|82201471|sp|Q6INS5.1|RN168_XENLA (RecName: Full=E3 ubiquitin-protein ligase rnf168; AltName: Full=RING finger protein 168) HSP 1 Score: 56.225 bits (134), Expect = 1.914e-8 Identity = 26/90 (28.89%), Postives = 48/90 (53.33%), Query Frame = 0
Query: 18 CPACLSKPNDPIRLPCNHIICLTCYKRNIELTSLHCPLCKRRLSNWSRSINTNGGPKVDPVVKRWLMTQKPQTSKRKRVSKVSSTSSDSI 107
CP C +P+ LPC H +C C++ +E SL CP C++R+S W+R +++ V+ + + Q P+ +R+ + S +D +
Sbjct: 16 CPICQEILLEPVTLPCKHTLCNPCFQMTVEKASLCCPFCRKRVSTWAR-LHSRTRTLVNTELWERIQKQYPKECQRRASGQESDDLADEL 104
BLAST of EMLSAG00000000031 vs. SwissProt
Match: gi|226741366|sp|B0BLU1.1|RN168_XENTR (RecName: Full=E3 ubiquitin-protein ligase rnf168; AltName: Full=RING finger protein 168) HSP 1 Score: 55.8398 bits (133), Expect = 2.538e-8 Identity = 27/90 (30.00%), Postives = 47/90 (52.22%), Query Frame = 0
Query: 18 CPACLSKPNDPIRLPCNHIICLTCYKRNIELTSLHCPLCKRRLSNWSRSINTNGGPKVDPVVKRWLMTQKPQTSKRKRVSKVSSTSSDSI 107
CP C +P+ LPC H +C C++ +E SL CP C++R+S W+R ++ V+ + + Q P+ +R+ + S SD +
Sbjct: 16 CPICQEILLEPVTLPCKHTLCNPCFQMTVEKASLCCPFCRKRVSTWARQ-HSRTRTLVNKELWEVIQKQYPKQCQRRASGQESDDLSDEL 104
BLAST of EMLSAG00000000031 vs. SwissProt
Match: gi|82208322|sp|Q7T308.1|RN168_DANRE (RecName: Full=E3 ubiquitin-protein ligase rnf168; AltName: Full=RING finger protein 168) HSP 1 Score: 55.4546 bits (132), Expect = 3.819e-8 Identity = 19/48 (39.58%), Postives = 31/48 (64.58%), Query Frame = 0
Query: 18 CPACLSKPNDPIRLPCNHIICLTCYKRNIELTSLHCPLCKRRLSNWSR 65
CP CL +P+ LPC H C C+ ++ +++ CPLC++R+S W+R
Sbjct: 26 CPVCLEIFLEPVTLPCMHTFCKPCFLETVDKSNMCCPLCRKRVSTWAR 73
BLAST of EMLSAG00000000031 vs. Select Arthropod Genomes
Match: gb|EEC05131.1| (conserved hypothetical protein, partial [Ixodes scapularis]) HSP 1 Score: 64.6994 bits (156), Expect = 3.571e-12 Identity = 23/54 (42.59%), Postives = 36/54 (66.67%), Query Frame = 0
Query: 18 CPACLSKPNDPIRLPCNHIICLTCYKRNIELTSLHCPLCKRRLSNWSRSINTNG 71
CP CL +P+ LPC H +CLTC+++++ L + CPLC+ R+S+W+R G
Sbjct: 1 CPVCLGVRAEPVTLPCGHGVCLTCFEQSLHLANKECPLCRLRISSWARRAAREG 54
BLAST of EMLSAG00000000031 vs. Select Arthropod Genomes
Match: XP_006566135.1 (PREDICTED: kinesin-related protein 4-like [Apis mellifera]) HSP 1 Score: 57.7658 bits (138), Expect = 3.111e-9 Identity = 23/49 (46.94%), Postives = 30/49 (61.22%), Query Frame = 0
Query: 18 CPACLSKPNDPIRLPCNHIICLTCYKRNIELTSLHCPLCKRRLSNWSRS 66
CP C S +P+ LPC H +CL C K E SL CPLC+ R+ +W R+
Sbjct: 30 CPVCRSILIEPVTLPCTHNLCLKCLKGTFEHNSLSCPLCRIRVGSWLRT 78
BLAST of EMLSAG00000000031 vs. Select Arthropod Genomes
Match: EFX88501.1 (hypothetical protein DAPPUDRAFT_310691 [Daphnia pulex]) HSP 1 Score: 54.299 bits (129), Expect = 3.881e-8 Identity = 21/53 (39.62%), Postives = 32/53 (60.38%), Query Frame = 0
Query: 18 CPACLSKPNDPIRLPCNHIICLTCYKRNIELTSLHCPLCKRRLSNWSRSINTN 70
C CL+ P+ LPC H +C +CY +E ++L CP+C++R+S W R N
Sbjct: 50 CKICLNLMVKPVSLPCQHNLCYSCYLSCVEKSNLACPMCRKRISVWCRQAAKN 102
BLAST of EMLSAG00000000031 vs. Select Arthropod Genomes
Match: EAA01307.5 (AGAP001292-PA [Anopheles gambiae str. PEST]) HSP 1 Score: 51.9878 bits (123), Expect = 3.214e-7 Identity = 19/48 (39.58%), Postives = 26/48 (54.17%), Query Frame = 0
Query: 18 CPACLSKPNDPIRLPCNHIICLTCYKRNIELTSLHCPLCKRRLSNWSR 65
C C S +P+ LPC H+ C +C + IE L CP C++R W R
Sbjct: 52 CAVCQSVLIEPVFLPCQHLFCRSCIRETIETNKLCCPCCRKRFGTWYR 99
BLAST of EMLSAG00000000031 vs. Select Arthropod Genomes
Match: gb|EFA12951.1| (hypothetical protein TcasGA2_TC005071 [Tribolium castaneum]) HSP 1 Score: 51.6026 bits (122), Expect = 4.005e-7 Identity = 21/49 (42.86%), Postives = 30/49 (61.22%), Query Frame = 0
Query: 18 CPACLSKPNDPIRLPCNHIICLTCYKRNIELTSLHCPLCKRRLSNWSRS 66
CP C S PI LPC+H C +C+ E +++ CPLC+ R+ +W RS
Sbjct: 23 CPICRSILIRPITLPCSHGFCSSCFDTTTENSNVVCPLCRVRVGSWLRS 71
BLAST of EMLSAG00000000031 vs. nr
Match: gi|225712782|gb|ACO12237.1| (RING finger protein 168 [Lepeophtheirus salmonis]) HSP 1 Score: 392.119 bits (1006), Expect = 4.629e-138 Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0
Query: 1 MPNTSKVRIKKPPLNTECPACLSKPNDPIRLPCNHIICLTCYKRNIELTSLHCPLCKRRLSNWSRSINTNGGPKVDPVVKRWLMTQKPQTSKRKRVSKVSSTSSDSIKKDFEQEILHFRNKENTNHDEDNPDEIASMFSTDIEEQKQIEQRLLREREDARIALALNNSFRGVVDRSKNSPDAYSLRSKRMA 191
MPNTSKVRIKKPPLNTECPACLSKPNDPIRLPCNHIICLTCYKRNIELTSLHCPLCKRRLSNWSRSINTNGGPKVDPVVKRWLMTQKPQTSKRKRVSKVSSTSSDSIKKDFEQEILHFRNKENTNHDEDNPDEIASMFSTDIEEQKQIEQRLLREREDARIALALNNSFRGVVDRSKNSPDAYSLRSKRMA
Sbjct: 1 MPNTSKVRIKKPPLNTECPACLSKPNDPIRLPCNHIICLTCYKRNIELTSLHCPLCKRRLSNWSRSINTNGGPKVDPVVKRWLMTQKPQTSKRKRVSKVSSTSSDSIKKDFEQEILHFRNKENTNHDEDNPDEIASMFSTDIEEQKQIEQRLLREREDARIALALNNSFRGVVDRSKNSPDAYSLRSKRMA 191
BLAST of EMLSAG00000000031 vs. nr
Match: gi|225718670|gb|ACO15181.1| (RING finger protein 168 [Caligus clemensi]) HSP 1 Score: 140.969 bits (354), Expect = 4.208e-39 Identity = 78/179 (43.58%), Postives = 105/179 (58.66%), Query Frame = 0
Query: 13 PLNTECPACLSKPNDPIRLPCNHIICLTCYKRNIELTSLHCPLCKRRLSNWSRSINTNGGPKVDPVVKRWLMTQ--KPQTSKRKRVSKVSSTSSDSIKKDFEQEILHFRNKENTNHDEDNPDEIASMFSTDIEEQKQIEQRLLREREDARIALALNNSF-RGVVDRSKNSPDAYSLRSK 188
P N ECP CL P DPI+LPC HI+CLTC+K+N+E+TSL+CPLCKRRLS W+R +N +GGP VD V++WL KP TS + + + N + D + +T+++EQ+ IE++L RER+DA+ A L S VDRS NS DAY LRS+
Sbjct: 14 PFNKECPVCLCIPPDPIKLPCRHILCLTCFKQNVEITSLNCPLCKRRLSIWTRRLNASGGPTVDHSVQKWLQDHENKPSTSCQ-----------------VPDPVYNLENSLSWLVSAPGKDTQDYLLNTNLKEQRIIEEQLRRERKDAQFARLLQKSLDNNPVDRSTNSVDAYPLRSR 175
BLAST of EMLSAG00000000031 vs. nr
Match: gi|443695439|gb|ELT96350.1| (hypothetical protein CAPTEDRAFT_86119, partial [Capitella teleta]) HSP 1 Score: 68.1662 bits (165), Expect = 5.009e-11 Identity = 34/110 (30.91%), Postives = 60/110 (54.55%), Query Frame = 0
Query: 18 CPACLSKPNDPIRLPCNHIICLTCYKRNIELTSLHCPLCKRRLSNWSRS-------INTNGGPKV-----DPVVKRWLMTQKPQTSKRKRVSKVSSTSSDSIKKDFEQEI 115
CP CLS +P+ +PC+H +C+ C+K+N+E + CPLC++R+S W R +NT ++ D V KR + QTS + +S + +I+ ++ +E+
Sbjct: 18 CPVCLSVLIEPVTMPCDHELCMPCFKQNVEEANFTCPLCRKRISTWVRRATRTNSLVNTKRWCQIQKAFPDKVQKRLQGVEDDQTSDEEFISITPLSEPGAIRDEYMKEL 127
BLAST of EMLSAG00000000031 vs. nr
Match: gi|942196951|ref|XP_014351209.1| (PREDICTED: E3 ubiquitin-protein ligase RNF169 [Latimeria chalumnae]) HSP 1 Score: 70.4774 bits (171), Expect = 6.929e-11 Identity = 25/48 (52.08%), Postives = 34/48 (70.83%), Query Frame = 0
Query: 18 CPACLSKPNDPIRLPCNHIICLTCYKRNIELTSLHCPLCKRRLSNWSR 65
CP CL +P+ LPC H +CL C++R +E SLHCPLC+ R+S W+R
Sbjct: 51 CPVCLEVFVEPVTLPCLHSLCLACFRRTVETASLHCPLCRTRVSTWAR 98
BLAST of EMLSAG00000000031 vs. nr
Match: gi|1005431495|ref|XP_015753430.1| (PREDICTED: E3 ubiquitin-protein ligase RNF168-like [Acropora digitifera]) HSP 1 Score: 69.707 bits (169), Expect = 8.729e-11 Identity = 30/70 (42.86%), Postives = 44/70 (62.86%), Query Frame = 0
Query: 18 CPACLSKPNDPIRLPCNHIICLTCYKRNIELTSLHCPLCKRRLSNWSRSINTNGGPKVDPVVKRWLMTQK 87
CP CL +P+ +PC H +C C+K+N+E + CPLC+ R+S+W+R NT G VD +KRW Q+
Sbjct: 11 CPICLQILIEPVVMPCEHELCRPCFKKNVEEANFVCPLCRMRISSWARR-NTRKGTLVD--LKRWEQIQR 77
BLAST of EMLSAG00000000031 vs. nr
Match: gi|1133459210|ref|XP_011403358.2| (PREDICTED: E3 ubiquitin-protein ligase RNF168-like, partial [Amphimedon queenslandica]) HSP 1 Score: 67.3958 bits (163), Expect = 1.859e-10 Identity = 29/67 (43.28%), Postives = 43/67 (64.18%), Query Frame = 0
Query: 17 ECPACLSKPNDPIRLPCNHIICLTCYKRNIELTSLHCPLCKRRLSNWSRSINTNGGPKVDPVVKRWL 83
ECP CL P+ LPC+H +CL CYK +++ + +CPLC++R S+WSR+++ DPV R L
Sbjct: 15 ECPVCLVLLEVPVTLPCSHELCLECYKSSLDSANFYCPLCRKRFSSWSRNVS-------DPVNSRRL 74
BLAST of EMLSAG00000000031 vs. nr
Match: gi|443731953|gb|ELU16865.1| (hypothetical protein CAPTEDRAFT_89528, partial [Capitella teleta]) HSP 1 Score: 64.6994 bits (156), Expect = 2.364e-10 Identity = 33/87 (37.93%), Postives = 50/87 (57.47%), Query Frame = 0
Query: 15 NTECPACLSKPNDPIRLPCNHIICLTCYKRNIELTSLHCPLCKRRLSNWS-RSINTNGGPKVDPVVKRWLMTQKPQTSK-RKRVSKV 99
+ CP CLS +P+ +PC+H +C+ C+K+N+E + CPLC++R+S W R+ TN KRW QK K +KR+ V
Sbjct: 15 DCACPVCLSVLIEPVTMPCDHELCMPCFKQNVEEANFTCPLCRKRISTWVRRATRTNSLVN----TKRWCQIQKAFPDKVQKRLQGV 97
BLAST of EMLSAG00000000031 vs. nr
Match: gi|632934458|ref|XP_007884192.1| (PREDICTED: E3 ubiquitin-protein ligase RNF168 [Callorhinchus milii]) HSP 1 Score: 68.9366 bits (167), Expect = 2.661e-10 Identity = 30/75 (40.00%), Postives = 45/75 (60.00%), Query Frame = 0
Query: 2 PNTSKVRIKKPPLNTE----CPACLSKPNDPIRLPCNHIICLTCYKRNIELTSLHCPLCKRRLSNWSRSINTNGG 72
P S V +PP T CP C +P+ PC H +CL C+++ +++++L CPLC+RRLSNW+R +GG
Sbjct: 27 PAASPVGAPEPPPLTRSECLCPVCQELLLEPVTPPCGHSLCLDCFQKTVQISNLTCPLCRRRLSNWARRQARSGG 101
BLAST of EMLSAG00000000031 vs. nr
Match: gi|1025151289|ref|XP_016334480.1| (PREDICTED: E3 ubiquitin-protein ligase RNF169-like [Sinocyclocheilus anshuiensis]) HSP 1 Score: 64.6994 bits (156), Expect = 4.582e-10 Identity = 26/59 (44.07%), Postives = 40/59 (67.80%), Query Frame = 0
Query: 10 KKPPLNTE---CPACLSKPNDPIRLPCNHIICLTCYKRNIELTSLHCPLCKRRLSNWSR 65
+ PL+ E CP C +P+ +PC H +CL C++R ++LTSL CPLC+ R+S+W+R
Sbjct: 15 RSAPLSLEEARCPVCSEILLEPVTMPCGHSVCLHCFQRTVKLTSLCCPLCRLRVSSWAR 73
BLAST of EMLSAG00000000031 vs. nr
Match: gi|1049227799|ref|XP_017552229.1| (PREDICTED: E3 ubiquitin-protein ligase RNF169 [Pygocentrus nattereri]) HSP 1 Score: 67.781 bits (164), Expect = 6.631e-10 Identity = 24/48 (50.00%), Postives = 36/48 (75.00%), Query Frame = 0
Query: 18 CPACLSKPNDPIRLPCNHIICLTCYKRNIELTSLHCPLCKRRLSNWSR 65
CP CL +P+ +PC H +CL C+KR +EL++L CPLC+ R+S+W+R
Sbjct: 54 CPVCLEILLEPVTMPCGHSVCLHCFKRTVELSTLCCPLCRLRVSSWAR 101 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000031 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 25
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BLAST of EMLSAG00000000031 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
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BLAST of EMLSAG00000000031 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 3
BLAST of EMLSAG00000000031 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 9
BLAST of EMLSAG00000000031 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 5
BLAST of EMLSAG00000000031 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
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BLAST of EMLSAG00000000031 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1006:149120..150851+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000031-682797 ID=EMLSAG00000000031-682797|Name=EMLSAG00000000031|organism=Lepeophtheirus salmonis|type=gene|length=1732bp|location=Sequence derived from alignment at LSalAtl2s1006:149120..150851+ (Lepeophtheirus salmonis)back to top Add to Basket
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