EMLSAG00000000139, EMLSAG00000000139-682905 (gene) Lepeophtheirus salmonis

Overview


Name	EMLSAG00000000139
Unique Name	EMLSAG00000000139-682905
Type	gene
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of EMLSAG00000000139 vs. GO
Match: - (symbol:CCNC "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0000079 "regulation of cyclin-dependent protein serine/threonine kinase activity" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0016591 "DNA-directed RNA polymerase II, holoenzyme" evidence=IEA] [GO:0016592 "mediator complex" evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA] InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758 GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0016591 PANTHER:PTHR10026 GeneTree:ENSGT00690000101911 OMA:FFANVIQ OrthoDB:EOG7WX08X GO:GO:0016592 EMBL:CU041276 Ensembl:ENSSSCT00000004810 Uniprot:F1RXY0)

HSP 1 Score: 255.758 bits (652), Expect = 1.322e-79
Identity = 122/224 (54.46%), Postives = 164/224 (73.21%), Query Frame = 0

Query:  236 EQFGILKKVTTNL--AAGXQMLGPXSSPATST---SSQLSSSSPQCIDPLLLSPTAIFLASKVEEFGVISNTRLINTCTTVIKNKFSYAYPNQDFPYRANNILECEFYLLENLDCCMVVFLPYRPLVQFSQDLNVEESVLPIAWRVVNDSLRTDVCLLYPPYLIALASLHIACVIMNKDCTQWFXXLNVDLEKVQDISKYIINLYELQKNFDEKKEMGGILGKM 454
            E++  L+   TN+  A G  +       AT+T       +  S + IDP+L++PT +FLASKVEEFGV+SNTRLI+  T+V K +FSYA+P   FPYR N+ILECEFYLLE +DCC++V+ PYRPL+Q+ QD+  E+ +LP+AWR+VND+ RTD+CLLYPP++IALA LH+ACV+  KD  QWF  L+VD+EK+ +I + I+ LYE  KNFDE+KEM  IL KM
Sbjct:   35 EEYWKLQIFFTNVIQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLISAATSVSKTRFSYAFPR--FPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDMLLPLAWRIVNDTYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKILEIIRVILKLYEQWKNFDERKEMATILSKM 256

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BLAST of EMLSAG00000000139 vs. GO
Match: - (symbol:Ccnc "Cyclin-C" species:10116 "Rattus norvegicus" [GO:0000079 "regulation of cyclin-dependent protein serine/threonine kinase activity" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0016591 "DNA-directed RNA polymerase II, holoenzyme" evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA] InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758 RGD:70905 GO:GO:0000079 GO:GO:0006355 GO:GO:0006351 Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0016591 eggNOG:COG5333 HOGENOM:HOG000008007 PANTHER:PTHR10026 HOVERGEN:HBG050836 EMBL:D14013 UniGene:Rn.106758 ProteinModelPortal:P39947 STRING:10116.ENSRNOP00000048420 PRIDE:P39947 UCSC:RGD:70905 InParanoid:P39947 PRO:PR:P39947 Genevestigator:P39947 Uniprot:P39947)

HSP 1 Score: 252.292 bits (643), Expect = 2.371e-78
Identity = 112/182 (61.54%), Postives = 148/182 (81.32%), Query Frame = 0

Query:  273 SPQCIDPLLLSPTAIFLASKVEEFGVISNTRLINTCTTVIKNKFSYAYPNQDFPYRANNILECEFYLLENLDCCMVVFLPYRPLVQFSQDLNVEESVLPIAWRVVNDSLRTDVCLLYPPYLIALASLHIACVIMNKDCTQWFXXLNVDLEKVQDISKYIINLYELQKNFDEKKEMGGILGKM 454
            S + IDP+L++PT +FLASKVEEFGV+SNT LI   T+V+K +FSYA P ++FPYR N+ILECEFYLLE +DCC++V+ PYRPL+Q+ QD+  E+ +LP+AWR+VND+ RTD+CLLYPP++IALA LH+ACV+  KD  QWF  L+VD+EK+ +I + I+ LYE  KNFDE+KEM  IL KM
Sbjct:   72 SLKSIDPVLMAPTCVFLASKVEEFGVVSNTSLIAATTSVLKTRFSYASP-KEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDVLLPLAWRIVNDTYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKILEIIRVILKLYEQWKNFDERKEMATILSKM 252

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BLAST of EMLSAG00000000139 vs. GO
Match: - (symbol:Ccnc "cyclin C" species:10116 "Rattus norvegicus" [GO:0000079 "regulation of cyclin-dependent protein serine/threonine kinase activity" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0016591 "DNA-directed RNA polymerase II, holoenzyme" evidence=IEA] [GO:0016592 "mediator complex" evidence=IEA;ISO] [GO:0019901 "protein kinase binding" evidence=IEA] InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758 RGD:70905 GO:GO:0000079 GO:GO:0006355 GO:GO:0006351 Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0016591 eggNOG:COG5333 HOGENOM:HOG000008007 PANTHER:PTHR10026 HOVERGEN:HBG050836 EMBL:D14013 UniGene:Rn.106758 ProteinModelPortal:P39947 STRING:10116.ENSRNOP00000048420 PRIDE:P39947 UCSC:RGD:70905 InParanoid:P39947 PRO:PR:P39947 Genevestigator:P39947 Uniprot:P39947)

HSP 1 Score: 252.292 bits (643), Expect = 2.371e-78
Identity = 112/182 (61.54%), Postives = 148/182 (81.32%), Query Frame = 0

Query:  273 SPQCIDPLLLSPTAIFLASKVEEFGVISNTRLINTCTTVIKNKFSYAYPNQDFPYRANNILECEFYLLENLDCCMVVFLPYRPLVQFSQDLNVEESVLPIAWRVVNDSLRTDVCLLYPPYLIALASLHIACVIMNKDCTQWFXXLNVDLEKVQDISKYIINLYELQKNFDEKKEMGGILGKM 454
            S + IDP+L++PT +FLASKVEEFGV+SNT LI   T+V+K +FSYA P ++FPYR N+ILECEFYLLE +DCC++V+ PYRPL+Q+ QD+  E+ +LP+AWR+VND+ RTD+CLLYPP++IALA LH+ACV+  KD  QWF  L+VD+EK+ +I + I+ LYE  KNFDE+KEM  IL KM
Sbjct:   72 SLKSIDPVLMAPTCVFLASKVEEFGVVSNTSLIAATTSVLKTRFSYASP-KEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDVLLPLAWRIVNDTYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKILEIIRVILKLYEQWKNFDERKEMATILSKM 252

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BLAST of EMLSAG00000000139 vs. GO
Match: - (symbol:CCNC "Cyclin-C" species:9606 "Homo sapiens" [GO:0000079 "regulation of cyclin-dependent protein serine/threonine kinase activity" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0016591 "DNA-directed RNA polymerase II, holoenzyme" evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA] InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758 GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0016591 PANTHER:PTHR10026 EMBL:AL137784 HGNC:HGNC:1581 ProteinModelPortal:J3KP90 SMR:J3KP90 Ensembl:ENST00000369220 UCSC:uc010kcs.3 NextBio:35535082 ArrayExpress:J3KP90 Uniprot:J3KP90)

HSP 1 Score: 251.136 bits (640), Expect = 9.452e-78
Identity = 121/224 (54.02%), Postives = 165/224 (73.66%), Query Frame = 0

Query:  236 EQFGILKKVTTNL--AAGXQMLGPXSSPATST---SSQLSSSSPQCIDPLLLSPTAIFLASKVEEFGVISNTRLINTCTTVIKNKFSYAYPNQDFPYRANNILECEFYLLENLDCCMVVFLPYRPLVQFSQDLNVEESVLPIAWRVVNDSLRTDVCLLYPPYLIALASLHIACVIMNKDCTQWFXXLNVDLEKVQDISKYIINLYELQKNFDEKKEMGGILGKM 454
            E++  L+   TN+  A G  +       AT+T       +  S + IDP+L++PT +FLASKVEEFGV+SNTRLI   T+V+K +FSYA+P ++FPYR N+ILECEFYLLE +DCC++V+ PYRPL+Q+ QD+  E+ +LP+AW +VND+ RTD+CLLYPP++IALA LH+ACV+  KD  QWF  L+VD+EK+ +I + I+ LYE  KNFDE+KEM  IL KM
Sbjct:   35 EEYWKLQIFFTNVIQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLIAAATSVLKTRFSYAFP-KEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDMLLPLAW-IVNDTYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKILEIIRVILKLYEQWKNFDERKEMATILSKM 256

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BLAST of EMLSAG00000000139 vs. GO
Match: - (symbol:ccnc "cyclin C" species:7955 "Danio rerio" [GO:0016591 "DNA-directed RNA polymerase II, holoenzyme" evidence=IEA] [GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0000079 "regulation of cyclin-dependent protein serine/threonine kinase activity" evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758 ZFIN:ZDB-GENE-030131-7369 GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0016591 eggNOG:COG5333 HOGENOM:HOG000008007 KO:K15161 PANTHER:PTHR10026 CTD:892 HOVERGEN:HBG050836 EMBL:BC060903 EMBL:AY398320 EMBL:AY450302 RefSeq:NP_956245.1 UniGene:Dr.151536 STRING:7955.ENSDARP00000017380 GeneID:335429 KEGG:dre:335429 InParanoid:Q6STL0 NextBio:20810840 Uniprot:Q6STL0)

HSP 1 Score: 250.751 bits (639), Expect = 1.181e-77
Identity = 107/185 (57.84%), Postives = 152/185 (82.16%), Query Frame = 0

Query:  270 SSSSPQCIDPLLLSPTAIFLASKVEEFGVISNTRLINTCTTVIKNKFSYAYPNQDFPYRANNILECEFYLLENLDCCMVVFLPYRPLVQFSQDLNVEESVLPIAWRVVNDSLRTDVCLLYPPYLIALASLHIACVIMNKDCTQWFXXLNVDLEKVQDISKYIINLYELQKNFDEKKEMGGILGKM 454
            +  S + IDP+L++PT +FLASKVEEFGV+SNTRLI+  T+V+K +FSYA+P ++FP+R N+ILECEFYLLE +DCC++V+ PYRPL+Q+ QD+  E+ +LP+AWR+VND+ RTD+CLLYPP++IALA LH+ACV+  KD  QWF  L+VD+EK+ +I + I+ LY+  KNFD++KE+  +L K+
Sbjct:   74 ARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLISAATSVLKTRFSYAFP-KEFPFRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDMLLPLAWRIVNDTYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKILEIIRVILKLYDQWKNFDDRKEIAAVLNKV 257

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BLAST of EMLSAG00000000139 vs. GO
Match: - (symbol:CCNC "Cyclin-C" species:9606 "Homo sapiens" [GO:0000079 "regulation of cyclin-dependent protein serine/threonine kinase activity" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0016592 "mediator complex" evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA] InterPro:IPR015429 GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954 PANTHER:PTHR10026 GO:GO:0016592 EMBL:AL137784 HGNC:HGNC:1581 ProteinModelPortal:E5RFX8 SMR:E5RFX8 Ensembl:ENST00000524049 NextBio:35497885 ArrayExpress:E5RFX8 Bgee:E5RFX8 Uniprot:E5RFX8)

HSP 1 Score: 233.417 bits (594), Expect = 1.358e-72
Identity = 101/163 (61.96%), Postives = 136/163 (83.44%), Query Frame = 0

Query:  282 LSPTAIFLASKVEEFGVISNTRLINTCTTVIKNKFSYAYPNQDFPYRANNILECEFYLLENLDCCMVVFLPYRPLVQFSQDLNVEESVLPIAWRVVNDSLRTDVCLLYPPYLIALASLHIACVIMNKDCTQWFXXLNVDLEKVQDISKYIINLYELQKNFDEK 444
            ++PT +FLASKVEEFGV+SNTRLI   T+V+K +FSYA+P ++FPYR N+ILECEFYLLE +DCC++V+ PYRPL+Q+ QD+  E+ +LP+AWR+VND+ RTD+CLLYPP++IALA LH+ACV+  KD  QWF  L+VD+EK+ +I + I+ LYE  KNFDE+
Sbjct:    1 MAPTCVFLASKVEEFGVVSNTRLIAAATSVLKTRFSYAFP-KEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDMLLPLAWRIVNDTYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKILEIIRVILKLYEQWKNFDER 162

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BLAST of EMLSAG00000000139 vs. GO
Match: - (symbol:MED20 "Mediator complex subunit 20" species:7227 "Drosophila melanogaster" [GO:0001104 "RNA polymerase II transcription cofactor activity" evidence=IEA;ISS] [GO:0016592 "mediator complex" evidence=ISS;IDA] [GO:0006367 "transcription initiation from RNA polymerase II promoter" evidence=ISS] [GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IDA] [GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0003713 "transcription coactivator activity" evidence=IDA] [GO:0003899 "DNA-directed RNA polymerase activity" evidence=ISS;NAS] [GO:0006351 "transcription, DNA-templated" evidence=ISS;NAS] InterPro:IPR013921 Pfam:PF08612 EMBL:AE014134 GO:GO:0006367 GO:GO:0016592 GO:GO:0001104 KO:K13528 eggNOG:NOG268717 GeneTree:ENSGT00390000002060 OrthoDB:EOG7XSTFN CTD:9477 EMBL:Y10975 EMBL:BT003473 RefSeq:NP_524663.2 UniGene:Dm.1877 ProteinModelPortal:P91641 BioGrid:68741 DIP:DIP-21881N IntAct:P91641 MINT:MINT-742218 STRING:7227.FBpp0079166 PaxDb:P91641 PRIDE:P91641 EnsemblMetazoa:FBtr0079544 GeneID:43952 KEGG:dme:Dmel_CG18780 FlyBase:FBgn0013531 InParanoid:P91641 PhylomeDB:P91641 GenomeRNAi:43952 NextBio:836450 PRO:PR:P91641 Bgee:P91641 Uniprot:P91641)

HSP 1 Score: 198.364 bits (503), Expect = 4.568e-58
Identity = 99/222 (44.59%), Postives = 141/222 (63.51%), Query Frame = 0

Query:   44 MGVTALLVYPLPQDKTASQTIEIIQKRILNLGANHTGQFLVDCETYINT-----TVPSKVLHXLHNSXXPATVFSILESPGKHSVSFTSDTLFDLLLLKLSNIYS--KKSKIESKGHRFEIGDFLVKLGVVSSAGSFKGILIEVEYIPCSFISSCWSLMVEFMQGFLGSIVPKEIPSCIKNK------------ESPDEIFTPLDTIQLYLEQFGILKKVTT 246
            MGVT L  YPLP+ K+ +  I+ + KR+L LGA H GQFLVDCET+I+T       P + +H LHNS  PA+ FSI+++     V+  +D +FDLL+LK++N ++  K++KIES+G RFE GDF++KLG V+    FKGILIE+EY  C  ++ CW ++ E +QGFLG  V K+ PS    +               ++IF P+DT++ YLEQF   +K  T
Sbjct:    1 MGVTILQPYPLPEGKSGAHIIDQLSKRLLALGATHAGQFLVDCETFISTPQPHNGAPGRAVHVLHNSEYPASTFSIIDNGTGKQVAIVADNIFDLLMLKMTNTFTSKKQTKIESRGARFEYGDFVIKLGSVTMMEHFKGILIEIEYKSCVILAYCWEMIREMLQGFLGIAVNKDFPSYFAPQTIMTAMGQQQLHAKHNDIFEPMDTVKQYLEQFTNYRKHVT 222

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BLAST of EMLSAG00000000139 vs. GO
Match: - (symbol:CCNC "Cyclin C, isoform CRA_c" species:9606 "Homo sapiens" [GO:0000079 "regulation of cyclin-dependent protein serine/threonine kinase activity" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0016591 "DNA-directed RNA polymerase II, holoenzyme" evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA] InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758 GO:GO:0000079 GO:GO:0006355 EMBL:CH471051 Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0016591 PANTHER:PTHR10026 EMBL:AL137784 UniGene:Hs.430646 UniGene:Hs.633351 HGNC:HGNC:1581 ProteinModelPortal:G5E954 SMR:G5E954 Ensembl:ENST00000326298 NextBio:35518110 ArrayExpress:G5E954 Uniprot:G5E954)

HSP 1 Score: 186.808 bits (473), Expect = 3.133e-54
Identity = 89/166 (53.61%), Postives = 124/166 (74.70%), Query Frame = 0

Query:  236 EQFGILKKVTTNL--AAGXQMLGPXSSPATST---SSQLSSSSPQCIDPLLLSPTAIFLASKVEEFGVISNTRLINTCTTVIKNKFSYAYPNQDFPYRANNILECEFYLLENLDCCMVVFLPYRPLVQFSQDLNVEESVLPIAWRVVNDSLRTDVCLLYPPYLIAL 396
            E++  L+   TN+  A G  +       AT+T       +  S + IDP+L++PT +FLASKVEEFGV+SNTRLI   T+V+K +FSYA+P ++FPYR N+ILECEFYLLE +DCC++V+ PYRPL+Q+ QD+  E+ +LP+AWR+VND+ RTD+CLLYPP++IAL
Sbjct:   35 EEYWKLQIFFTNVIQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLIAAATSVLKTRFSYAFP-KEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDMLLPLAWRIVNDTYRTDLCLLYPPFMIAL 199

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BLAST of EMLSAG00000000139 vs. GO
Match: - (symbol:MED20 "Uncharacterized protein" species:9913 "Bos taurus" [GO:0001104 "RNA polymerase II transcription cofactor activity" evidence=IEA] [GO:0016592 "mediator complex" evidence=IEA] InterPro:IPR013921 Pfam:PF08612 GO:GO:0006366 GO:GO:0016592 GO:GO:0001104 KO:K13528 eggNOG:NOG268717 GeneTree:ENSGT00390000002060 OrthoDB:EOG7XSTFN CTD:9477 HOGENOM:HOG000290707 HOVERGEN:HBG106543 OMA:KSHFQNA TreeFam:TF315156 EMBL:DAAA02055061 EMBL:DAAA02055062 EMBL:BC146258 RefSeq:NP_001096763.1 UniGene:Bt.11273 STRING:9913.ENSBTAP00000013323 Ensembl:ENSBTAT00000013323 GeneID:540294 KEGG:bta:540294 InParanoid:A6H7I4 NextBio:20878544 Uniprot:A6H7I4)

HSP 1 Score: 153.68 bits (387), Expect = 7.782e-42
Identity = 82/209 (39.23%), Postives = 128/209 (61.24%), Query Frame = 0

Query:   44 MGVTALLVYPLPQDKTASQTIEIIQKRILNLGANHTGQFLVDCETY--INTTVPS-----KVLHXLHNSXXPATVFSILESPGKHSVSFTSDTLFDLLLLKLSNIY--SKKSKIESKGHRFEIGDFLVKLGVVSSAGSFKGILIEVEYIPCSFISSCWSLMVEFMQGFLGSIVPKEIPSCIKNKESPDEIFTPLDTIQLYLEQFGILKK 243
            MGVT +   P+ + K+  QT+E++ +++  LGA   G F VDCETY    +T+ S     K+++ +HNS  P + F++ E    +     +DT FD+L++KL   +  +K SKIE++G R++  DFLVK+G V+   S +GI +EVEY PC   S CWSL++EF+Q FLGS  P   P+   N+   D +++P DT+  Y+E F  ++K
Sbjct:    1 MGVTCVSQMPVAEGKSVQQTVELLTRKLEMLGAEKQGTFCVDCETYHTAASTLGSQGQAGKLMYVMHNSEYPLSCFALFE----NGPCLVADTNFDVLMVKLKGFFQSAKASKIETRGTRYQYCDFLVKVGTVTMGPSARGISVEVEYGPCVVASDCWSLLLEFLQSFLGSHTPG-APAVFGNRH--DAVYSPADTMVQYMELFNKIRK 202

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BLAST of EMLSAG00000000139 vs. GO
Match: - (symbol:Med20 "Mediator of RNA polymerase II transcription subunit 20" species:10116 "Rattus norvegicus" [GO:0001104 "RNA polymerase II transcription cofactor activity" evidence=IEA] [GO:0016592 "mediator complex" evidence=IEA] InterPro:IPR013921 Pfam:PF08612 RGD:1306415 GO:GO:0006366 GO:GO:0016592 GO:GO:0001104 KO:K13528 eggNOG:NOG268717 GeneTree:ENSGT00390000002060 OrthoDB:EOG7XSTFN CTD:9477 HOGENOM:HOG000290707 HOVERGEN:HBG106543 OMA:KSHFQNA EMBL:BC083734 RefSeq:NP_001013196.1 UniGene:Rn.231768 STRING:10116.ENSRNOP00000018523 PhosphoSite:Q5XIE9 PRIDE:Q5XIE9 Ensembl:ENSRNOT00000018523 GeneID:316209 KEGG:rno:316209 UCSC:RGD:1306415 InParanoid:Q5XIE9 NextBio:670528 PRO:PR:Q5XIE9 Genevestigator:Q5XIE9 Uniprot:Q5XIE9)

HSP 1 Score: 152.525 bits (384), Expect = 1.840e-41
Identity = 83/209 (39.71%), Postives = 127/209 (60.77%), Query Frame = 0

Query:   44 MGVTALLVYPLPQDKTASQTIEIIQKRILNLGANHTGQFLVDCETY--INTTVPS-----KVLHXLHNSXXPATVFSILESPGKHSVSFTSDTLFDLLLLKLSNIY--SKKSKIESKGHRFEIGDFLVKLGVVSSAGSFKGILIEVEYIPCSFISSCWSLMVEFMQGFLGSIVPKEIPSCIKNKESPDEIFTPLDTIQLYLEQFGILKK 243
            MGVT +   P+ + K+  QT+E++ K++  LGA   G F VDCETY    +T+ S     K+++ +HNS  P + F++ E    +     +DT FD+L++KL   +  +K SKIE++G R++  DFLVK+G V+   S +GI +EVEY PC   S CWSL++EF+Q FLGS  P   P+   N+   D ++ P DT+  Y+E F  ++K
Sbjct:    1 MGVTCVSQMPVAEGKSVQQTVELLTKKLEMLGAEKQGTFCVDCETYHTAASTLGSQGQAGKLMYVMHNSEYPLSCFALFE----NGPCLIADTNFDVLMVKLKGFFQSAKASKIETRGTRYQYCDFLVKVGTVTMGPSARGISVEVEYGPCVVASDCWSLLLEFLQSFLGSHTPG-APTVFGNRH--DAVYGPADTMVQYMELFNKVRK 202

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BLAST of EMLSAG00000000139 vs. C. finmarchicus
Match: gi|592859527|gb|GAXK01098035.1| (TSA: Calanus finmarchicus comp39507_c2_seq1 transcribed RNA sequence)

HSP 1 Score: 289.271 bits (739), Expect = 3.722e-89
Identity = 132/189 (69.84%), Postives = 166/189 (87.83%), Query Frame = 0

Query:  276 CIDPLLLSPTAIFLASKVEEFGVISNTRLINTCTTVIKNKFSYAYPNQ-DFPYRANNILECEFYLLENLDCCMVVFLPYRPLVQFSQDLN--VEESVLPIAWRVVNDSLRTDVCLLYPPYLIALASLHIACVIMNKDCTQWFXXLNVDLEKVQDISKYIINLYELQKNFDEKKEMGGILGKMPKPKIXP 461
            C+DPLLL+PT +FL+SKVEEFGVISNTRLINTC+T+IKNKF+YA+P+  DFPYRAN+ILECEFYLLEN+DCC+VVF PYRPLVQ++QDL   +EE++LP+AWR+VNDS+RTDVCLL+PP+LIALA LH+A VI+ KD   WF  L VD++K+Q+ISK+++ LYEL K++DEKKE+  IL KMPKPK  P
Sbjct:  218 CVDPLLLAPTCVFLSSKVEEFGVISNTRLINTCSTIIKNKFNYAFPSPFDFPYRANSILECEFYLLENMDCCLVVFQPYRPLVQYTQDLGQGLEEALLPLAWRIVNDSMRTDVCLLFPPFLIALACLHMASVILGKDLKIWFAELAVDMDKIQEISKHVLGLYELWKSYDEKKEIAAILQKMPKPKTQP 784

HSP 2 Score: 194.126 bits (492), Expect = 1.138e-53
Identity = 117/213 (54.93%), Postives = 145/213 (68.08%), Query Frame = 0

Query:   42 YSMGVTALLVYPLPQDKTASQTIEIIQKRILNLGANHTGQFLVDCETY--INTTVP---------SKVLHXLHNSXXPATVFSILESPGKHSVXXXXXXXXXXXXXKLSNIYSKKSKIESKGHRFEIGDFLVKLGVVSSAGSFKGILIEVEYIPCSFISSCWSLMVEFMQGFLGSIVPKEIPSCIKNKESPDEIFTPLDTIQLYLEQFGILKK 243
            ++MGV  L +YP   ++T  QTIE + KRI+NLGA   GQFLVDCE +  + T V          +K L+ LHNS  PATVFS+LE   K +V+ TSDTLFDLL+LKL+N+Y KK+ IESKG RFEI DFLVKLG V+  G FKG+L+EVEY PC   ++CW ++ EFMQGFLGS V    P  I +K S  E FTP DT+Q YLE F I +K
Sbjct: 1160 HAMGVVVLQLYPGQDNRTGPQTIETLTKRIMNLGATQAGQFLVDCEVHQSVATQVQQTSQQPIPGNKNLYILHNSEYPATVFSVLECNNK-TVTLTSDTLFDLLMLKLTNVYKKKTTIESKGPRFEIRDFLVKLGSVTVGGVFKGVLVEVEYCPCVVPNNCWGILQEFMQGFLGSCVTSTPPQYISSKGS--ETFTPSDTVQQYLEHFNIFRK 1789

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BLAST of EMLSAG00000000139 vs. C. finmarchicus
Match: gi|592766039|gb|GAXK01188529.1| (TSA: Calanus finmarchicus comp11164_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 62.3882 bits (150), Expect = 1.463e-9
Identity = 39/130 (30.00%), Postives = 69/130 (53.08%), Query Frame = 0

Query:  322 NQDFPYRANNILECEFYLLENLDCCMVVFLPYRPLVQFSQDLNVEESV--LPIAWRVVNDSLRTDVCLLYPPYLIALASLHIACVIMN---KDCTQWFXXLNVDLEKVQDISKYIINLYELQKNFDEKKE 446
            + D+    NNI++ E  +L+ L  C+ +  P++ +V + Q L  E+    + ++W  +NDSLRTD  + Y P  IA A ++++   +N        W+  LNV+ + ++D    II LY+  K   E+ E
Sbjct:  477 DTDYINLKNNIIKAERRVLKELGFCVHIKHPHKLIVMYMQLLGFEQHAKFVQMSWNFMNDSLRTDGFVRYQPETIACACIYLSARKLNIPLPKKPAWYEILNVEEDDIRDCCYRIICLYQRSKPVQEELE 866

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BLAST of EMLSAG00000000139 vs. C. finmarchicus
Match: gi|592926319|gb|GAXK01032115.1| (TSA: Calanus finmarchicus comp20533_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 45.4394 bits (106), Expect = 3.517e-4
Identity = 40/168 (23.81%), Postives = 78/168 (46.43%), Query Frame = 0

Query:  287 IFLASKVEEFGVISNTRLINTCTTVIKNKFSYAYPNQDFPYRAN---NILECEFYLLENLDCCMVVFLPYRPLVQFSQDLNVE----ESVLPIAWRVVNDSLRTDVCLLYPPYLIALASLHIACVIMNKDCTQWFXXL------------NVDLEKVQDISKYIINLY 435
            +FLA K EE            C  +IK   +    NQ   +  +    ++  E  LL+ +   + V  PY  L+++++ L  +    + ++ ++W  VNDSL T +CL + P +IA+A +++A  +   +   W   L            +++ E ++DI   +++LY
Sbjct:  265 LFLAGKAEE--------TPKKCRDLIKTVRNLTNDNQFSTFGGDPREEVMTLERVLLQTIKFDLQVDHPYSSLLKYAKCLKGDKPKLQKMVQMSWTFVNDSLCTTLCLQWEPEVIAIALMYLAAKLSKFEVKDWKSRLPDHKYWWDQYVKDLETEVLEDICHQVLDLY 744

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BLAST of EMLSAG00000000139 vs. C. finmarchicus
Match: gi|592881732|gb|GAXK01076372.1| (TSA: Calanus finmarchicus comp98023_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 39.2762 bits (90), Expect = 3.410e-2
Identity = 28/138 (20.29%), Postives = 68/138 (49.28%), Query Frame = 0

Query:  328 RANNILECEFYLLENLDCCMVVFLPYRPLVQFSQDLNVEESVLPIAWRVVNDSLR-TDVCLLYPPYLIALASLHIAC------VIMNKDCTQWFXXLN--VDLEKVQDISKYIINLYE----------LQKNFDEKKE 446
            +A  ++  E  LL+ L   + +  P+  +V+  Q +   + +   ++ +  +SL  T +CL YPP ++A   +H+AC      + ++     W+  ++   ++E+++ ++K  + +++          LQ + D K+E
Sbjct:  783 QAQELVSNENILLQTLGFDVAIDHPHTHVVKCCQLVKASKELAQTSYFMATNSLHLTTMCLRYPPTIVACVCIHLACKWSKYEIPLSGQGKPWYSYVDPTSNIEQIERLTKEFLTIFDKCPSRLKKKILQSHNDTKEE 1196

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BLAST of EMLSAG00000000139 vs. C. finmarchicus
Match: gi|592788859|gb|GAXK01165709.1| (TSA: Calanus finmarchicus comp144_c117_seq26 transcribed RNA sequence)

HSP 1 Score: 38.5058 bits (88), Expect = 3.737e-2
Identity = 37/127 (29.13%), Postives = 54/127 (42.52%), Query Frame = 0

Query:  285 TAIFLASKVEEFGVISNTRLINTCTTVIKNKFSYAYPNQDFPYRANNI-LECEFYLLENLDCCMVVFLPYRPLVQFSQDLNVE-------ESVLPIAWRVVNDSLRTDVCLLYPPYLIALAS-LHIA 402
            TA++LA KVEEF V     + N               NQ+   RA  I L  E  L++ L   + V  P+R +     D+          +S  P     ++    TD C++Y P  IALA+ +H A
Sbjct:  355 TAVYLACKVEEFNVSMQQFIANV------------QGNQE---RATKIILNNELLLMQELQFHLTVHNPFRAVEGLLIDIKTRCDSVHSVDSFRPEIQTFLDSVFLTDACMIYAPSQIALAAVIHAA 690

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BLAST of EMLSAG00000000139 vs. C. finmarchicus
Match: gi|592788942|gb|GAXK01165626.1| (TSA: Calanus finmarchicus comp144_c88_seq14 transcribed RNA sequence)

HSP 1 Score: 37.7354 bits (86), Expect = 7.080e-2
Identity = 37/127 (29.13%), Postives = 54/127 (42.52%), Query Frame = 0

Query:  285 TAIFLASKVEEFGVISNTRLINTCTTVIKNKFSYAYPNQDFPYRANNI-LECEFYLLENLDCCMVVFLPYRPLVQFSQDLNVE-------ESVLPIAWRVVNDSLRTDVCLLYPPYLIALAS-LHIA 402
            TA++LA KVEEF V     + N               NQ+   RA  I L  E  L++ L   + V  P+R +     D+          +S  P     ++    TD C++Y P  IALA+ +H A
Sbjct:  371 TAVYLACKVEEFNVSMQQFIANV------------QGNQE---RATKIILNNELLLMQELQFHLTVHNPFRAVEGLLIDIKTRCDSVHSVDSFRPEIQTFLDSVFLTDACMIYAPSQIALAAVIHAA 706

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BLAST of EMLSAG00000000139 vs. C. finmarchicus
Match: gi|592788872|gb|GAXK01165696.1| (TSA: Calanus finmarchicus comp144_c117_seq13 transcribed RNA sequence)

HSP 1 Score: 37.7354 bits (86), Expect = 7.137e-2
Identity = 37/127 (29.13%), Postives = 54/127 (42.52%), Query Frame = 0

Query:  285 TAIFLASKVEEFGVISNTRLINTCTTVIKNKFSYAYPNQDFPYRANNI-LECEFYLLENLDCCMVVFLPYRPLVQFSQDLNVE-------ESVLPIAWRVVNDSLRTDVCLLYPPYLIALAS-LHIA 402
            TA++LA KVEEF V     + N               NQ+   RA  I L  E  L++ L   + V  P+R +     D+          +S  P     ++    TD C++Y P  IALA+ +H A
Sbjct:  355 TAVYLACKVEEFNVSMQQFIANV------------QGNQE---RATKIILNNELLLMQELQFHLTVHNPFRAVEGLLIDIKTRCDSVHSVDSFRPEIQTFLDSVFLTDACMIYAPSQIALAAVIHAA 690

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BLAST of EMLSAG00000000139 vs. C. finmarchicus
Match: gi|592788943|gb|GAXK01165625.1| (TSA: Calanus finmarchicus comp144_c88_seq13 transcribed RNA sequence)

HSP 1 Score: 37.7354 bits (86), Expect = 7.137e-2
Identity = 37/127 (29.13%), Postives = 54/127 (42.52%), Query Frame = 0

Query:  285 TAIFLASKVEEFGVISNTRLINTCTTVIKNKFSYAYPNQDFPYRANNI-LECEFYLLENLDCCMVVFLPYRPLVQFSQDLNVE-------ESVLPIAWRVVNDSLRTDVCLLYPPYLIALAS-LHIA 402
            TA++LA KVEEF V     + N               NQ+   RA  I L  E  L++ L   + V  P+R +     D+          +S  P     ++    TD C++Y P  IALA+ +H A
Sbjct:  387 TAVYLACKVEEFNVSMQQFIANV------------QGNQE---RATKIILNNELLLMQELQFHLTVHNPFRAVEGLLIDIKTRCDSVHSVDSFRPEIQTFLDSVFLTDACMIYAPSQIALAAVIHAA 722

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BLAST of EMLSAG00000000139 vs. C. finmarchicus
Match: gi|592788874|gb|GAXK01165694.1| (TSA: Calanus finmarchicus comp144_c117_seq11 transcribed RNA sequence)

HSP 1 Score: 37.7354 bits (86), Expect = 7.543e-2
Identity = 37/127 (29.13%), Postives = 54/127 (42.52%), Query Frame = 0

Query:  285 TAIFLASKVEEFGVISNTRLINTCTTVIKNKFSYAYPNQDFPYRANNI-LECEFYLLENLDCCMVVFLPYRPLVQFSQDLNVE-------ESVLPIAWRVVNDSLRTDVCLLYPPYLIALAS-LHIA 402
            TA++LA KVEEF V     + N               NQ+   RA  I L  E  L++ L   + V  P+R +     D+          +S  P     ++    TD C++Y P  IALA+ +H A
Sbjct:  355 TAVYLACKVEEFNVSMQQFIANV------------QGNQE---RATKIILNNELLLMQELQFHLTVHNPFRAVEGLLIDIKTRCDSVHSVDSFRPEIQTFLDSVFLTDACMIYAPSQIALAAVIHAA 690

[Close]

BLAST of EMLSAG00000000139 vs. C. finmarchicus
Match: gi|592788945|gb|GAXK01165623.1| (TSA: Calanus finmarchicus comp144_c88_seq11 transcribed RNA sequence)

HSP 1 Score: 37.7354 bits (86), Expect = 7.543e-2
Identity = 37/127 (29.13%), Postives = 54/127 (42.52%), Query Frame = 0

Query:  285 TAIFLASKVEEFGVISNTRLINTCTTVIKNKFSYAYPNQDFPYRANNI-LECEFYLLENLDCCMVVFLPYRPLVQFSQDLNVE-------ESVLPIAWRVVNDSLRTDVCLLYPPYLIALAS-LHIA 402
            TA++LA KVEEF V     + N               NQ+   RA  I L  E  L++ L   + V  P+R +     D+          +S  P     ++    TD C++Y P  IALA+ +H A
Sbjct:  447 TAVYLACKVEEFNVSMQQFIANV------------QGNQE---RATKIILNNELLLMQELQFHLTVHNPFRAVEGLLIDIKTRCDSVHSVDSFRPEIQTFLDSVFLTDACMIYAPSQIALAAVIHAA 782

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BLAST of EMLSAG00000000139 vs. L. salmonis peptides
Match: EMLSAP00000000139 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1021:54890:58082:-1 gene:EMLSAG00000000139 transcript:EMLSAT00000000139 description:"maker-LSalAtl2s1021-augustus-gene-0.33")

HSP 1 Score: 951.814 bits (2459), Expect = 0.000e+0
Identity = 474/474 (100.00%), Postives = 474/474 (100.00%), Query Frame = 0

Query:    1 MILIFVIWIEDGASFSRTYFLRIKENVNTTIALKLRCANYPYSMGVTALLVYPLPQDKTASQTIEIIQKRILNLGANHTGQFLVDCETYINTTVPSKVLHXLHNSXXPATVFSILESPGKHSVSFTSDTLFDLLLLKLSNIYSKKSKIESKGHRFEIGDFLVKLGVVSSAGSFKGILIEVEYIPCSFISSCWSLMVEFMQGFLGSIVPKEIPSCIKNKESPDEIFTPLDTIQLYLEQFGILKKVTTNLAAGXQMLGPXSSPATSTSSQLSSSSPQCIDPLLLSPTAIFLASKVEEFGVISNTRLINTCTTVIKNKFSYAYPNQDFPYRANNILECEFYLLENLDCCMVVFLPYRPLVQFSQDLNVEESVLPIAWRVVNDSLRTDVCLLYPPYLIALASLHIACVIMNKDCTQWFXXLNVDLEKVQDISKYIINLYELQKNFDEKKEMGGILGKMPKPKIXPPTLPSAPSHNMPH 474
            MILIFVIWIEDGASFSRTYFLRIKENVNTTIALKLRCANYPYSMGVTALLVYPLPQDKTASQTIEIIQKRILNLGANHTGQFLVDCETYINTTVPSKVLHXLHNSXXPATVFSILESPGKHSVSFTSDTLFDLLLLKLSNIYSKKSKIESKGHRFEIGDFLVKLGVVSSAGSFKGILIEVEYIPCSFISSCWSLMVEFMQGFLGSIVPKEIPSCIKNKESPDEIFTPLDTIQLYLEQFGILKKVTTNLAAGXQMLGPXSSPATSTSSQLSSSSPQCIDPLLLSPTAIFLASKVEEFGVISNTRLINTCTTVIKNKFSYAYPNQDFPYRANNILECEFYLLENLDCCMVVFLPYRPLVQFSQDLNVEESVLPIAWRVVNDSLRTDVCLLYPPYLIALASLHIACVIMNKDCTQWFXXLNVDLEKVQDISKYIINLYELQKNFDEKKEMGGILGKMPKPKIXPPTLPSAPSHNMPH
Sbjct:    1 MILIFVIWIEDGASFSRTYFLRIKENVNTTIALKLRCANYPYSMGVTALLVYPLPQDKTASQTIEIIQKRILNLGANHTGQFLVDCETYINTTVPSKVLHXLHNSXXPATVFSILESPGKHSVSFTSDTLFDLLLLKLSNIYSKKSKIESKGHRFEIGDFLVKLGVVSSAGSFKGILIEVEYIPCSFISSCWSLMVEFMQGFLGSIVPKEIPSCIKNKESPDEIFTPLDTIQLYLEQFGILKKVTTNLAAGXQMLGPXSSPATSTSSQLSSSSPQCIDPLLLSPTAIFLASKVEEFGVISNTRLINTCTTVIKNKFSYAYPNQDFPYRANNILECEFYLLENLDCCMVVFLPYRPLVQFSQDLNVEESVLPIAWRVVNDSLRTDVCLLYPPYLIALASLHIACVIMNKDCTQWFXXLNVDLEKVQDISKYIINLYELQKNFDEKKEMGGILGKMPKPKIXPPTLPSAPSHNMPH 474

[Close]

BLAST of EMLSAG00000000139 vs. L. salmonis peptides
Match: EMLSAP00000006168 (pep:novel supercontig:LSalAtl2s:LSalAtl2s336:638014:639671:1 gene:EMLSAG00000006168 transcript:EMLSAT00000006168 description:"maker-LSalAtl2s336-snap-gene-6.47")

HSP 1 Score: 368.622 bits (945), Expect = 1.762e-125
Identity = 189/213 (88.73%), Postives = 200/213 (93.90%), Query Frame = 0

Query:   44 MGVTALLVYPLPQDKTASQTIEIIQKRILNLGANHTGQFLVDCETYINTTVPSKVLHXLHNSXXPATVFSILESPGKHSVSFTSDTLFDLLLLKLSNIYSKKSKIESKGHRFEIGDFLVKLGVVSSAGSFKGILIEVEYIPCSFISSCWSLMVEFMQGFLGSIVPKEIPSCIKNKESPDEIFTPLDTIQLYLEQFGILKKVTTNLAAGXQMLG 256
            MGVT+LL+YPLPQDKTA QTI++IQKRILNLGA HTGQFLVDCETYINTTVPSKVLH LHNS  PATVFSILESPGKHSVSFTSDTLFDLLLLKLSNIYSKKSKIESKGHRFEIGDFLVKLGVVSSAGSFKGILIEVEY+PCS ISS W+L+VEFMQGFLGS VP EIPSCIK+KESP E+F+PLDTIQLYLE FGIL+KVTTNLAAG QM G
Sbjct:    1 MGVTSLLIYPLPQDKTAPQTIDLIQKRILNLGAVHTGQFLVDCETYINTTVPSKVLHVLHNSEQPATVFSILESPGKHSVSFTSDTLFDLLLLKLSNIYSKKSKIESKGHRFEIGDFLVKLGVVSSAGSFKGILIEVEYLPCSVISSSWNLIVEFMQGFLGSTVPTEIPSCIKSKESPGEMFSPLDTIQLYLEHFGILRKVTTNLAAGPQMTG 213

[Close]

BLAST of EMLSAG00000000139 vs. L. salmonis peptides
Match: EMLSAP00000000197 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1029:207469:226371:-1 gene:EMLSAG00000000197 transcript:EMLSAT00000000197 description:"maker-LSalAtl2s1029-snap-gene-1.52")

HSP 1 Score: 59.3066 bits (142), Expect = 9.827e-10
Identity = 46/187 (24.60%), Postives = 93/187 (49.73%), Query Frame = 0

Query:  281 LLSPTAIFLASKVEE--------FGVISNTRLINTCTTVIKNKFSYAYPNQDFPYRANNILECEFYLLENLDCCMVVFLPYRPLVQFSQ--DLNVEESVLPIAWRVVNDSLRTDVCLLYPPYLIALASLHIACVIMNKDCTQ---WFXXLNVDLEKVQDISKYIINLYELQK-NFDEKKEMGGILGK 453
            +++   + LASK+EE          V ++ + +     ++       Y N       N +++ E  +L+ L  C+ V  P++ +V + +  +L+  + +L ++W  +NDSLRTD+ + YPP  +A A ++++   +     +   WF  L V+ + ++D    +I LY  +K N  E ++M  +L K
Sbjct:   98 IVAMAXLVLASKIEEXPRRIRDIINVFTHIKQVRNSQPIVPVSLDQNYVNL-----KNQVIKAERRVLKELGFCVHVKHPHKIIVMYLKWLELDTNKELLQMSWNFMNDSLRTDIFVRYPPECVATACIYLSARKLKVPLPKNPAWFDCLGVEEDDIKDCCYRMICLYNRKKPNQLELEKMLDVLRK 279

[Close]

BLAST of EMLSAG00000000139 vs. SwissProt
Match: gi|82082346|sp|Q5ZKY9.1|MED20_CHICK (RecName: Full=Mediator of RNA polymerase II transcription subunit 20; AltName: Full=Mediator complex subunit 20; AltName: Full=TRF-proximal protein homolog)

HSP 1 Score: 142.124 bits (357), Expect = 1.721e-38
Identity = 82/208 (39.42%), Postives = 123/208 (59.13%), Query Frame = 0

Query:   44 MGVTALLVYPLPQDKTASQTIEIIQKRILNLGANHTGQFLVDCETYINTTVPS------KVLHXLHNSXXPATVFSILESPGKHSVSFTSDTLFDLLLLKLSNIY--SKKSKIESKGHRFEIGDFLVKLGVVSSAGSFKGILIEVEYIPCSFISSCWSLMVEFMQGFLGSIVPKEIPSCIKNKESPDEIFTPLDTIQLYLEQFGILKK 243
            MGVT +   P+ + K+  QT+E++ K++  LGA   G F VDCETY      S      K+++ +HNS  P + F++ E+         +D  FD L++KL   +  +K +KIES+G R++  DFLVK+G V+   S +GI +EVEY PC   + CW+L++EFMQ F+GS  P  IPS    K   D I++P DT+  Y+E F  ++K
Sbjct:    1 MGVTCVTQVPVLEGKSVQQTVELLSKKLELLGAEKHGAFGVDCETYHTAAAISSQGQTGKLMYVMHNSEYPLSCFALFEN----GPCLIADANFDTLMVKLKGFFQNAKANKIESRGTRYQYCDFLVKVGTVTMGPSARGISVEVEYCPCVIANDCWNLLMEFMQSFMGSHTPG-IPSVFGTKH--DSIYSPADTMVQYMELFNKIRK 201

[Close]

BLAST of EMLSAG00000000139 vs. SwissProt
Match: gi|75014141|sp|Q86KE7.1|CCNC_DICDI (RecName: Full=Cyclin-C)

HSP 1 Score: 124.79 bits (312), Expect = 1.625e-31
Identity = 76/226 (33.63%), Postives = 125/226 (55.31%), Query Frame = 0

Query:  241 LKKVTTNLAAGXQMLG---PXSSPATSTS------SQLSSSSPQCIDPLLLSPTAIFLASKVEEFGVISNTRLINTCTTVIKNKFSYAYPNQDFPYRANNILECEFYLLENLDCCMVVFLPYRPLVQFSQDLNVEESVLPIAWRVVNDSLRTDVCLLYPPYLIALASLHIACVIMNKDCTQWFXXLNVDLEKVQDISKYIINLYEL--QKNFDEKKEMGGILGKMP 455
            LKK+ T+     Q LG        A ST+        L +S   C +P L++ T ++L+SKVEE   I+  +    C   +K        +  F Y  N+ILECEF++LE LD C++++ PY+ L  + Q   ++ + + I W +VNDS RTDVCLLYPP+++ L  + +   ++ KD  QW   LNV+++ + ++SK +I+ YE   Q++   + E+  +  K+P
Sbjct:   37 LKKLRTHYCFVIQNLGNALKLRQRAISTAIVYFKRFYLKNSFVDC-EPRLVAVTCLYLSSKVEE--CITQAK---KCAAKMKE------IDHSFNYLMNDILECEFFVLEELDFCLIIYHPYKSLPFYLQSSGLDPASIEIIWGIVNDSYRTDVCLLYPPFVVGLGCILLGSYLLKKDIKQWLSELNVEMKDIWEVSKDLIDYYEFEKQQSLQNQSELDLLYNKLP 250

[Close]

BLAST of EMLSAG00000000139 vs. SwissProt
Match: gi|3334144|sp|P93411.1|CCC11_ORYSJ (RecName: Full=Cyclin-C1-1; Short=CycC1;1)

HSP 1 Score: 119.013 bits (297), Expect = 1.709e-29
Identity = 71/183 (38.80%), Postives = 110/183 (60.11%), Query Frame = 0

Query:  278 DPLLLSPTAIFLASKVEEFGVISNTRLINTCTTVIKNKFSYAYPNQDFPYRANNILECEFYLLENLDCCMVVFLPYRPLVQFSQDLNVEESVLPIAWRVVNDSLRTDVCLLYPPYLIALASLHIACVIMNKDCTQWFXXLNVDLEKVQDISKYIINLYEL-----QKNFDEKKEMGGILGKMP 455
            DP L++PT ++LASKVEE  V    RL+      IK   +    ++ + +   +ILE E  LLE LD  +VV+ PYRPL+Q  QD  + + +   AW +VND+ + D+ L++PPY+IALA ++IA V+ +KD T WF  L VD+  V++IS  I++ Y+      Q+   E K +  ++ K+P
Sbjct:   82 DPRLVAPTCLYLASKVEESTV--QARLL---VFYIKKMCA---SDEKYRFEIKDILEMEMKLLEALDYYLVVYHPYRPLLQLLQDAGITD-LTQFAWGIVNDTYKMDLILIHPPYMIALACIYIASVLKDKDITLWFEELRVDMNIVKNISMEILDFYDTYKIDPQRGLPEDK-IAPVMNKLP 254

[Close]

BLAST of EMLSAG00000000139 vs. SwissProt
Match: gi|75309141|sp|Q9FJK7.1|CCC12_ARATH (RecName: Full=Cyclin-C1-2; Short=CycC1;2)

HSP 1 Score: 112.464 bits (280), Expect = 3.686e-27
Identity = 76/239 (31.80%), Postives = 129/239 (53.97%), Query Frame = 0

Query:  216 KNKESPDEI--FTPLDTIQ-LYLEQFGILKKVTTN----LAAGXQMLGPXSSPATSTSSQL-SSSSPQCIDPLLLSPTAIFLASKVEEFGVISNTRLINTCTTVIKNKFSYAYPNQDFPYRANNILECEFYLLENLDCCMVVFLPYRPLVQFSQDLNVEE-SVLPIAWRVVNDSLRTDVCLLYPPYLIALASLHIACVIMNKDCTQWFXXLNVDLEKVQDISKYIINLYELQKNFDEKK 445
            K  + P+E+    PLD  + + +E F ++K   +N    LA   ++     + A +   ++ +  S    +P L++PT ++LA K EE  V+    L+     +        Y ++ F Y   +ILE E  +LE L+  +VVF PYR L +F QD  + + S+  + W +VND+ R D+ L++PP+LI LA ++IA V   KD   WF  L+VD+  V++I+  I++ YE  + F E++
Sbjct:   12 KELKDPEEVNVVHPLDAQRGISVEDFRLIKLHMSNYISKLAQHIKIRQRVVATAVTYMRRVYTRKSLTEYEPRLVAPTCLYLACKAEE-SVVHAKLLVFYMKKL--------YADEKFRYEIKDILEMEMKVLEALNFYLVVFHPYRSLPEFLQDSGINDTSMTHLTWGLVNDTYRMDLILIHPPFLITLACIYIASVHKEKDIKTWFEELSVDMNIVKNIAMEILDFYENHRLFTEER 241

[Close]

BLAST of EMLSAG00000000139 vs. SwissProt
Match: gi|75024894|sp|Q9TYP2.2|CCNC_CAEEL (RecName: Full=Cyclin-C)

HSP 1 Score: 112.849 bits (281), Expect = 7.823e-27
Identity = 65/195 (33.33%), Postives = 105/195 (53.85%), Query Frame = 0

Query:  279 PLLLSPTAIFLASKVEEFGVISNTRLINTCTTVIKNKFSYAYPNQDFPYRANNILECEFYLLENLDCCMVVFLPYRP-------LVQFSQDLNVE-------ESVLPIAWRVVNDSLRTDVCLLYPPYLIALASLHIACVIMNK--DCTQWFXXLNVDLEKVQDISKYIINLYELQKNFDEKKEMGGILGKMPKP 457
            P L++ TA+FLA KVEE   +S +  +     V+  ++   +       +   + + EF L+E LDCC+VV    RP       L QF+Q   +        E++     +V NDSLR DV L++PP++I L+S+ +A  +M +  +   W   ++ D EKV D  + I  +Y L K+FDEK+E+  ++ K+PKP
Sbjct:   92 PFLVASTALFLACKVEEHTTLSVSSFLKNTAIVLPKRWGVTFETT--STKNGVVYDSEFILVEILDCCLVVHHASRPMFELLEDLKQFTQQSTIANQPIKDLEAIEAQCQKVANDSLRCDVSLIFPPHVIGLSSIMVAMELMGRGEELEAWLVEVDTDFEKVTDCVEQIYKMYTLWKSFDEKEEVKKLMAKLPKP 284

[Close]

BLAST of EMLSAG00000000139 vs. Select Arthropod Genomes
Match: gb|KYB28405.1| (Cyclin-C-like protein [Tribolium castaneum])

HSP 1 Score: 290.426 bits (742), Expect = 3.208e-95
Identity = 132/192 (68.75%), Postives = 162/192 (84.38%), Query Frame = 0

Query:  270 SSSSPQCIDPLLLSPTAIFLASKVEEFGVISNTRLINTCTTVIKNKFSYAYPNQDFPYRANNILECEFYLLENLDCCMVVFLPYRPLVQFSQDLNVEESVLPIAWRVVNDSLRTDVCLLYPPYLIALASLHIACVIMNKDCTQWFXXLNVDLEKVQDISKYIINLYELQKNFDEKKEMGGILGKMPKPKIXP 461
            + +S +CIDPLLL+PT IFLASKVEEFGVISN+RLI TC TVIKNKFSYAY +Q+FPYR N+ILECEFYLLENLDCC++V+ PYRPL+Q  QD+  E+ +L +AWR+VNDSLRTDVCLLYPPY IA+  L IACVI+ KD   WF  LNVD+E++Q+I++Y+INL+EL K +DEKKE+ G+L KMPKPK  P
Sbjct:   74 AKNSLKCIDPLLLAPTCIFLASKVEEFGVISNSRLITTCQTVIKNKFSYAY-SQEFPYRTNHILECEFYLLENLDCCLIVYQPYRPLLQLVQDMGQEDQLLTLAWRIVNDSLRTDVCLLYPPYQIAIGCLQIACVILQKDHKAWFAELNVDIERIQEIARYVINLFELWKTYDEKKEIQGLLNKMPKPKPAP 264

[Close]

BLAST of EMLSAG00000000139 vs. Select Arthropod Genomes
Match: gb|KFM76147.1| (Cyclin-C, partial [Stegodyphus mimosarum])

HSP 1 Score: 283.493 bits (724), Expect = 4.543e-92
Identity = 134/221 (60.63%), Postives = 172/221 (77.83%), Query Frame = 0

Query:  249 AAGXQMLGPXSSPATST---SSQLSSSSPQCIDPLLLSPTAIFLASKVEEFGVISNTRLINTCTTVIKNKFSYAYPNQDFPYRANNILECEFYLLENLDCCMVVFLPYRPLVQFSQDLNVEESVLPIAWRVVNDSLRTDVCLLYPPYLIALASLHIACVIMNKDCTQWFXXLNVDLEKVQDISKYIINLYELQKNFDEKKEMGGILGKMPKPKIXPPTLPS 466
            A G Q+       AT+T         +S +CIDPLL++PT IFLASKVEEFGVISN+RLI+TC TV+KNKF+YAYP Q+FPYR  ++LECEFYLLE +DCC+V++ PYRPLV + QD+  EE++LP+AW+V+NDSLRTDVCLLYPP+ IALA LH+ACVI+ KDC QWF  LNVD+EK+ +I++ I++LY+  K FDEKKE+  +L K+PKPK  P   PS
Sbjct:   50 ALGEQLKVKQQVIATATVYFKRFFVRNSLKCIDPLLMAPTCIFLASKVEEFGVISNSRLISTCQTVVKNKFAYAYP-QEFPYRMTHVLECEFYLLEMMDCCLVLYHPYRPLVYYVQDIGQEEALLPMAWKVINDSLRTDVCLLYPPHQIALACLHMACVILGKDCKQWFAELNVDMEKILEITRQILSLYDAWKQFDEKKEVPALLAKVPKPKTQPTRPPS 269

[Close]

BLAST of EMLSAG00000000139 vs. Select Arthropod Genomes
Match: EAA08619.2 (AGAP004240-PA [Anopheles gambiae str. PEST])

HSP 1 Score: 274.248 bits (700), Expect = 7.359e-89
Identity = 126/192 (65.62%), Postives = 156/192 (81.25%), Query Frame = 0

Query:  270 SSSSPQCIDPLLLSPTAIFLASKVEEFGVISNTRLINTCTTVIKNKFSYAYPNQDFPYRANNILECEFYLLENLDCCMVVFLPYRPLVQFSQDLNVEESVLPIAWRVVNDSLRTDVCLLYPPYLIALASLHIACVIMNKDCTQWFXXLNVDLEKVQDISKYIINLYELQKNFDEKKEMGGILGKMPKPKIXP 461
            + +S +CIDPLLL+PT I L+SKVEEFGVISN+RLI TC TVIKNKFSYAY  Q+FPYR N+ILECEFYLLENLDCC++V+ PYRPL+Q  QD+  EE +L + WR++NDSLRTDV LLYPPY IA+  L IACVI+ K+   WF  LNVD++KVQ+I++ I+NL+EL K +DEKKE+  +L KMPKPK  P
Sbjct:   74 ARNSLKCIDPLLLAPTCILLSSKVEEFGVISNSRLITTCQTVIKNKFSYAY-QQEFPYRTNHILECEFYLLENLDCCLIVYQPYRPLLQLMQDIGQEEQLLTLTWRLINDSLRTDVSLLYPPYQIAIGCLQIACVILQKELKSWFAELNVDMDKVQEIARAIVNLFELWKGYDEKKEIQALLEKMPKPKPHP 264

[Close]

BLAST of EMLSAG00000000139 vs. Select Arthropod Genomes
Match: XP_395475.2 (PREDICTED: cyclin-C [Apis mellifera])

HSP 1 Score: 273.092 bits (697), Expect = 2.170e-88
Identity = 123/193 (63.73%), Postives = 158/193 (81.87%), Query Frame = 0

Query:  270 SSSSPQCIDPLLLSPTAIFLASKVEEFGVISNTRLINTCTTVIKNKFSYAYPNQDFPYRANNILECEFYLLENLDCCMVVFLPYRPLVQFSQDLNVEESVLPIAWRVVNDSLRTDVCLLYPPYLIALASLHIACVIMNKDCTQWFXXLNVDLEKVQDISKYIINLYELQKNFDEKKEMGGILGKMPKPKIXPP 462
            + +S +CIDPLLL+PT++FLASKVEEFGVIS+ RLI  C TV+KNKF+YAY +Q+FPYR ++I ECEFYLLE+LDCC++V+ PYRPL+   QD+  +E +L +AWR++NDSLRTDVCLLYPP+ IA+  L IACVI+ KD   WF  LN D+EK+Q+I++YIINLYEL K +DEKKE+ G+L KMPKP   PP
Sbjct:   74 ARNSLKCIDPLLLAPTSVFLASKVEEFGVISHNRLIAACQTVVKNKFNYAY-SQEFPYRGSHISECEFYLLEHLDCCLIVYQPYRPLLILIQDIGPDEQLLTLAWRIINDSLRTDVCLLYPPHQIAIGCLQIACVILQKDLKAWFAELNADMEKIQEIARYIINLYELWKTYDEKKEIQGLLSKMPKPTPSPP 265

[Close]

BLAST of EMLSAG00000000139 vs. Select Arthropod Genomes
Match: EEB17418.1 (G1/S-specific cyclin-C, putative [Pediculus humanus corporis])

HSP 1 Score: 271.552 bits (693), Expect = 9.745e-88
Identity = 126/194 (64.95%), Postives = 157/194 (80.93%), Query Frame = 0

Query:  270 SSSSPQCIDPLLLSPTAIFLASKVEEFGVISNTRLINTCTTVIKNKFSYAYPNQDFPYRANNILECEFYLLENLDCCMVVFLPYRPLVQFSQDLN--VEESVLPIAWRVVNDSLRTDVCLLYPPYLIALASLHIACVIMNKDCTQWFXXLNVDLEKVQDISKYIINLYELQKNFDEKKEMGGILGKMPKPKIXP 461
            + +S +CIDPLLL+PT +FLASKVEEFGVISNTRLI  C  V+KNKFSYAY  Q+FPYR N+ILECEFYLLENLDCC++++ PYRPL+    D+    E+ ++ +AWRVVNDSLRTDVCLLYPPY IAL  L IACVI+ KD   WF  LNVD+EK+Q+I++++INL+EL K++DEKKE+  +L KMPKPK  P
Sbjct:   74 ARNSLKCIDPLLLAPTCVFLASKVEEFGVISNTRLITICQNVVKNKFSYAYA-QEFPYRTNHILECEFYLLENLDCCLILYQPYRPLLSLIADIGNGHEDQMMALAWRVVNDSLRTDVCLLYPPYQIALGCLQIACVILQKDLKTWFAELNVDMEKIQEIARHLINLFELWKSYDEKKEIPNLLAKMPKPKNQP 266

[Close]

BLAST of EMLSAG00000000139 vs. Select Arthropod Genomes
Match: gb|EEC16263.1| (Cdk activating kinase, putative, partial [Ixodes scapularis])

HSP 1 Score: 271.166 bits (692), Expect = 1.873e-87
Identity = 136/262 (51.91%), Postives = 182/262 (69.47%), Query Frame = 0

Query:  228 LDTIQLYLEQFGILKKVT-----------TNL--AAGXQMLGPXSSPATST---SSQLSSSSPQCIDPLLLSPTAIFLASKVEEFGVISNTRLINTCTTVIKNKFSYAYPNQDFPYRANNILECEFYLLENLDCCMVVFLPYRPLVQFSQDLNVEESVLPIAWRVVNDSLRTDVCLLYPPYLIALASLHIACVIMNKDCTQWFXXLNVDLEKVQDISKYIINLYELQKNFDEKKEMGGILGKMPKPKIXPPTLPSAPSHNMP 473
            LD   L  E+ G L+ +T            NL  A G Q+       AT+T         +S +C+DPLL++PT IFLASKVEEFGVISN+RL++TC TV+KNKF++ YP Q+FPYR N++LECEFYLLE +DCC+V++ PYRPLVQ+  D+  E+ +L +AW+VVNDSLRTDVCLL+PP+ IALA LH+ACVI+ +DC  WF  L VD+EK+ DI++ ++ LY+  +N DEKKE+  IL K+PKPK  P   PS   ++ P
Sbjct:   18 LDRQDLLRERHGDLQTLTEEEYQKLMIFFANLMQALGEQLKVKQQVIATATVYFKRFYVRNSLRCVDPLLMAPTCIFLASKVEEFGVISNSRLVSTCQTVVKNKFAHVYP-QEFPYRINHVLECEFYLLEMMDCCLVLYHPYRPLVQYVHDIGHEDQLLSMAWKVVNDSLRTDVCLLHPPHQIALACLHVACVILQRDCKHWFADLCVDMEKILDITRQVLGLYDTWRNLDEKKELPPILAKVPKPKTQPSRPPSQGPNDPP 278

[Close]

BLAST of EMLSAG00000000139 vs. Select Arthropod Genomes
Match: EFX88680.1 (G1/S-specific cyclin C-like protein [Daphnia pulex])

HSP 1 Score: 267.314 bits (682), Expect = 3.509e-86
Identity = 121/192 (63.02%), Postives = 158/192 (82.29%), Query Frame = 0

Query:  270 SSSSPQCIDPLLLSPTAIFLASKVEEFGVISNTRLINTCTTVIKNKFSYAYPNQDFPYRANNILECEFYLLENLDCCMVVFLPYRPLVQFSQDLNVEESVLPIAWRVVNDSLRTDVCLLYPPYLIALASLHIACVIMNKDCTQWFXXLNVDLEKVQDISKYIINLYELQKNFDEKKEMGGILGKMPKPKIXP 461
            + +S +CIDPLLL+PT I LASKVEEFGVISN RLI TC +V+K+KF+YAYP Q+FPYRA +ILECEFYLLEN+DCC+VV+ PYRPLVQF QD+  +E +L ++W++VNDSLRTD+ LLYPPY IALA++ +ACV++ KD   WF  + VD +K+Q+I++ I+ LY+L K +DEKKE+ G+L KMPKPK  P
Sbjct:   74 ARNSLKCIDPLLLAPTCILLASKVEEFGVISNNRLITTCQSVVKSKFNYAYP-QEFPYRAQHILECEFYLLENMDCCLVVYQPYRPLVQFVQDIG-QEDLLGLSWKIVNDSLRTDISLLYPPYQIALAAMQMACVVLQKDGKNWFAEIAVDTDKIQEITRQILALYDLYKTYDEKKEIQGLLAKMPKPKTQP 263

[Close]

BLAST of EMLSAG00000000139 vs. Select Arthropod Genomes
Match: AAF55109.1 (cyclin C [Drosophila melanogaster])

HSP 1 Score: 256.144 bits (653), Expect = 9.598e-82
Identity = 121/186 (65.05%), Postives = 151/186 (81.18%), Query Frame = 0

Query:  270 SSSSPQCIDPLLLSPTAIFLASKVEEFGVISNTRLINTCTTVIKNKFSYAYPNQDFPYRANNILECEFYLLENLDCCMVVFLPYRPLVQFSQDLNVEESVLPIAWRVVNDSLRTDVCLLYPPYLIALASLHIACVIMNKDCT-QWFXXLNVDLEKVQDISKYIINLYELQKNFDEKKEMGGILGKM 454
            + +S + IDPLLL+PT I LASKVEEFGVISN+RLI+ C + IK KFSYAY  Q+FPYR N+ILECEFYLLENLDCC++V+ PYRPL+Q  QD+  E+ +L ++WR+VNDSLRTDVCLLYPPY IA+A L IACVI+ KD T QWF  LNVDL+KVQ+I + I+NLYEL K++ EK E+  +L K+
Sbjct:   74 ARNSLKNIDPLLLAPTCILLASKVEEFGVISNSRLISICQSAIKTKFSYAYA-QEFPYRTNHILECEFYLLENLDCCLIVYQPYRPLLQLVQDMGQEDQLLTLSWRIVNDSLRTDVCLLYPPYQIAIACLQIACVILQKDATKQWFAELNVDLDKVQEIVRAIVNLYELWKDWKEKDEIQMLLSKI 258

[Close]

BLAST of EMLSAG00000000139 vs. Select Arthropod Genomes
Match: XP_001121318.2 (PREDICTED: mediator of RNA polymerase II transcription subunit 20 [Apis mellifera])

HSP 1 Score: 212.616 bits (540), Expect = 8.484e-66
Identity = 110/207 (53.14%), Postives = 143/207 (69.08%), Query Frame = 0

Query:   44 MGVTALLVYPLPQDKTASQTIEIIQKRILNLGANHTGQFLVDCETYINTTVPS----KVLHXLHNSXXPATVFSILESPGKHSVSFTSDTLFDLLLLKLSNIYSKK-SKIESKGHRFEIGDFLVKLGVVSSAGSFKGILIEVEYIPCSFISSCWSLMVEFMQGFLGSIVPKEIPSCIKNKESPDEIFTPLDTIQLYLEQFGILKKVT 245
            MGVT L  YP+ +++T  QTIE + KR++ LGA  TGQFLVDCETY+  +VP     + LH LHNS  PA+ F+ILES G   V   +D LFDLL+ K+S++Y+ K  K+ESKG RFEIGDF VKLG V+   +FKG+L+EVEY PC    S W L+ EF+QGFLGS V  + P  ++N+   ++I+ PLDTIQ YLE FG  +K T
Sbjct:    1 MGVTVLQQYPMIENRTGPQTIEFLTKRVVALGAMQTGQFLVDCETYV--SVPQLGVQRTLHVLHNSEQPASAFAILES-GNKVVPLIADGLFDLLMYKISSVYTNKMQKMESKGPRFEIGDFCVKLGSVTINQNFKGVLVEVEYRPCVVPGSAWELIREFLQGFLGSTVSNQAPQYLQNRM--NDIYQPLDTIQQYLEHFGQYRKAT 202

[Close]

BLAST of EMLSAG00000000139 vs. Select Arthropod Genomes
Match: EEB15770.1 (mediator complex subunit, putative [Pediculus humanus corporis])

HSP 1 Score: 211.075 bits (536), Expect = 4.322e-65
Identity = 106/205 (51.71%), Postives = 145/205 (70.73%), Query Frame = 0

Query:   44 MGVTALLVYPLPQDKTASQTIEIIQKRILNLGANHTGQFLVDCETYINTTV--PSKVLHXLHNSXXPATVFSILESPGKHSVSFTSDTLFDLLLLKLSNIYS--KKSKIESKGHRFEIGDFLVKLGVVSSAGSFKGILIEVEYIPCSFISSCWSLMVEFMQGFLGSIVPKEIPSCIKNKESPDEIFTPLDTIQLYLEQFGILKKV 244
            MGVT L  +P  +++T  QTIE++ KRI+ LGA   GQFLVDCETY +T+     K LH  HNS  PATVFSILE+ G  +VS  +D LFDLL+LK+++IY+  K++K ESKG RFE+GDF VKLG V+ + SFKG+L+EVEY PC   ++CW L+ EF+QGFLGS V    P+ ++ +   ++++ P+DTI  YLE F + +K 
Sbjct:    1 MGVTVLQQFPFVENRTGPQTIELLTKRIVALGAVQCGQFLVDCETYTSTSALGSQKTLHVFHNSEQPATVFSILET-GTKTVSLVADGLFDLLMLKMTSIYTSKKQTKCESKGSRFELGDFCVKLGNVTMSQSFKGVLVEVEYRPCCIPANCWELLKEFLQGFLGSCVQSAPPAYLQAR--INDLYQPIDTIHQYLEHFSLYRKA 202

[Close]

BLAST of EMLSAG00000000139 vs. nr
Match: gi|225717678|gb|ACO14685.1| (Cyclin-C [Caligus clemensi])

HSP 1 Score: 344.354 bits (882), Expect = 1.830e-113
Identity = 167/205 (81.46%), Postives = 176/205 (85.85%), Query Frame = 0

Query:  270 SSSSPQCIDPLLLSPTAIFLASKVEEFGVISNTRLINTCTTVIKNKFSYAYPNQDFPYRANNILECEFYLLENLDCCMVVFLPYRPLVQFSQDLNVEESVLPIAWRVVNDSLRTDVCLLYPPYLIALASLHIACVIMNKDCTQWFXXLNVDLEKVQDISKYIINLYELQKNFDEKKEMGGILGKMPKPKIXPPTLPSAPSHNMPH 474
            S +S +CIDPLLL+PT++FLASKVEEFGVISNTRLINTCT VIKNKFSYAYPNQDFPYRANNILECEFYLLENLDCC+VVFLPYRPLV F +DLNVEESVLP AWRVVNDSLRTDVCLLYPPY IALA LHIAC I+NKDC QWF  LNVDLEKVQDI KYI   YELQK FDEKKEM G+LGKM KPKI  P     P   MPH
Sbjct:   74 SQNSLKCIDPLLLAPTSVFLASKVEEFGVISNTRLINTCTNVIKNKFSYAYPNQDFPYRANNILECEFYLLENLDCCLVVFLPYRPLVLFCKDLNVEESVLPFAWRVVNDSLRTDVCLLYPPYQIALACLHIACAILNKDCVQWFAELNVDLEKVQDIVKYINGFYELQKIFDEKKEMAGVLGKMAKPKIQAPP---PPPQGMPH 275

[Close]

BLAST of EMLSAG00000000139 vs. nr
Match: gi|585669531|ref|XP_006817695.1| (PREDICTED: cyclin-C-like [Saccoglossus kowalevskii])

HSP 1 Score: 293.508 bits (750), Expect = 1.717e-93
Identity = 141/232 (60.78%), Postives = 175/232 (75.43%), Query Frame = 0

Query:  236 EQFGILKKVTTNL--AAGXQMLGPXSSPATST---SSQLSSSSPQCIDPLLLSPTAIFLASKVEEFGVISNTRLINTCTTVIKNKFSYAYPNQDFPYRANNILECEFYLLENLDCCMVVFLPYRPLVQFSQDLNVEESVLPIAWRVVNDSLRTDVCLLYPPYLIALASLHIACVIMNKDCTQWFXXLNVDLEKVQDISKYIINLYELQKNFDEKKEMGGILGKMPKPKIXPP 462
            E++  L     NL  A G Q+       AT+T       S +S + IDPLL++PT IFLASKVEEFGVISN+RL+  C TV+KNKF YAY NQ+FPYR +++LECEF+LLE LDCCM+V+ PYRPL+Q+ QD+  EE VLP+AWR+VNDSLRTD CLLYPP+ IALA LH+ACVI+ KDC  WF  LNVDL+K+ +IS+ I+ LY+L KNFDEKKE+ G+L KMPKPK  PP
Sbjct:   35 EEYQKLMIFYANLIQAVGEQLKVRQQVIATATIYFKRFYSKNSLKNIDPLLMAPTCIFLASKVEEFGVISNSRLLTACQTVVKNKFGYAYGNQEFPYRISHVLECEFFLLEMLDCCMIVYHPYRPLIQYVQDMGQEEQVLPLAWRIVNDSLRTDACLLYPPFQIALACLHMACVILQKDCKHWFAELNVDLDKILEISQLILKLYDLWKNFDEKKEIQGLLPKMPKPKTQPP 266

[Close]

BLAST of EMLSAG00000000139 vs. nr
Match: gi|1069821358|ref|XP_018333610.1| (PREDICTED: cyclin-C isoform X1 [Agrilus planipennis])

HSP 1 Score: 291.197 bits (744), Expect = 8.652e-93
Identity = 135/192 (70.31%), Postives = 161/192 (83.85%), Query Frame = 0

Query:  270 SSSSPQCIDPLLLSPTAIFLASKVEEFGVISNTRLINTCTTVIKNKFSYAYPNQDFPYRANNILECEFYLLENLDCCMVVFLPYRPLVQFSQDLNVEESVLPIAWRVVNDSLRTDVCLLYPPYLIALASLHIACVIMNKDCTQWFXXLNVDLEKVQDISKYIINLYELQKNFDEKKEMGGILGKMPKPKIXP 461
            + +S +CIDPLLL+PT IFLASKVEEFGVISN+RL+ TC TVIKNKF+YAY NQ+FPYR N+ILECEFYLLENLDCC++V+ PYRPL+Q  QDL  EE +L +AWR+VNDSLRTDVCLLYPPY IA+  L IACVI+ KD   WF  LNVD+EK+Q+I++ IINLYEL K +DEKKE+ G+L KMPKPK  P
Sbjct:   74 AKNSLKCIDPLLLAPTCIFLASKVEEFGVISNSRLLTTCQTVIKNKFAYAY-NQEFPYRTNHILECEFYLLENLDCCLIVYQPYRPLLQMVQDLGHEEQLLTLAWRIVNDSLRTDVCLLYPPYQIAIGCLQIACVILQKDHKSWFAELNVDIEKIQEIARCIINLYELWKQYDEKKEIQGLLNKMPKPKPAP 264

[Close]

BLAST of EMLSAG00000000139 vs. nr
Match: gi|91093000|ref|XP_968481.1| (PREDICTED: cyclin-C [Tribolium castaneum] >gi|1004401486|gb|KYB28405.1| Cyclin-C-like protein [Tribolium castaneum])

HSP 1 Score: 290.426 bits (742), Expect = 1.569e-92
Identity = 132/192 (68.75%), Postives = 162/192 (84.38%), Query Frame = 0

Query:  270 SSSSPQCIDPLLLSPTAIFLASKVEEFGVISNTRLINTCTTVIKNKFSYAYPNQDFPYRANNILECEFYLLENLDCCMVVFLPYRPLVQFSQDLNVEESVLPIAWRVVNDSLRTDVCLLYPPYLIALASLHIACVIMNKDCTQWFXXLNVDLEKVQDISKYIINLYELQKNFDEKKEMGGILGKMPKPKIXP 461
            + +S +CIDPLLL+PT IFLASKVEEFGVISN+RLI TC TVIKNKFSYAY +Q+FPYR N+ILECEFYLLENLDCC++V+ PYRPL+Q  QD+  E+ +L +AWR+VNDSLRTDVCLLYPPY IA+  L IACVI+ KD   WF  LNVD+E++Q+I++Y+INL+EL K +DEKKE+ G+L KMPKPK  P
Sbjct:   74 AKNSLKCIDPLLLAPTCIFLASKVEEFGVISNSRLITTCQTVIKNKFSYAY-SQEFPYRTNHILECEFYLLENLDCCLIVYQPYRPLLQLVQDMGQEDQLLTLAWRIVNDSLRTDVCLLYPPYQIAIGCLQIACVILQKDHKAWFAELNVDIERIQEIARYVINLFELWKTYDEKKEIQGLLNKMPKPKPAP 264

[Close]

BLAST of EMLSAG00000000139 vs. nr
Match: gi|1058200058|gb|JAT03678.1| (hypothetical protein g.28258, partial [Homalodisca liturata])

HSP 1 Score: 288.5 bits (737), Expect = 6.375e-92
Identity = 135/214 (63.08%), Postives = 168/214 (78.50%), Query Frame = 0

Query:  251 GXQMLGPXSSPATST---SSQLSSSSPQCIDPLLLSPTAIFLASKVEEFGVISNTRLINTCTTVIKNKFSYAYPNQDFPYRANNILECEFYLLENLDCCMVVFLPYRPLVQFSQDLNVEESVLPIAWRVVNDSLRTDVCLLYPPYLIALASLHIACVIMNKDCTQWFXXLNVDLEKVQDISKYIINLYELQKNFDEKKEMGGILGKMPKPKIXP 461
            G Q+       AT+T       + +S +CIDPLLL+PT +FLASKVEEFGVISN+RLI TC TV+KNKF+YAY +Q+FPYR N+ILECEFYLLENLDCC++V+ PYRPL+Q  QD+  EE +L +AWRV+NDSLRTDVCLLYPPY IA+  L IACVI+ KD   WF  LNVD+EK+Q+I+KY+INL+EL K +DEKK++  +L KMPKPK  P
Sbjct:   37 GEQLKLRQQVIATATVYFKRFYARNSLKCIDPLLLAPTCVFLASKVEEFGVISNSRLITTCQTVVKNKFNYAY-SQEFPYRTNHILECEFYLLENLDCCLIVYQPYRPLLQLIQDIGHEEQLLALAWRVINDSLRTDVCLLYPPYQIAIGCLQIACVILQKDLKSWFAELNVDIEKIQEIAKYVINLFELWKTYDEKKDIQALLAKMPKPKTQP 249

[Close]

BLAST of EMLSAG00000000139 vs. nr
Match: gi|1059380389|ref|XP_017780263.1| (PREDICTED: cyclin-C [Nicrophorus vespilloides])

HSP 1 Score: 288.886 bits (738), Expect = 6.768e-92
Identity = 131/192 (68.23%), Postives = 162/192 (84.38%), Query Frame = 0

Query:  270 SSSSPQCIDPLLLSPTAIFLASKVEEFGVISNTRLINTCTTVIKNKFSYAYPNQDFPYRANNILECEFYLLENLDCCMVVFLPYRPLVQFSQDLNVEESVLPIAWRVVNDSLRTDVCLLYPPYLIALASLHIACVIMNKDCTQWFXXLNVDLEKVQDISKYIINLYELQKNFDEKKEMGGILGKMPKPKIXP 461
            + +S +CIDPLLL+PT +FLASKVEEFGVISN+RLI TC TV+KNKFSYAY +Q+FPYR N+ILECEFYLLENLDCC++V+ PYRPL+Q  QD+  EE +L +AWR+VNDSLRTDVCLLYPPY IA+ SL +ACV++ KD   WF  LNVD+EK+Q+I++YIINL+EL K +DEKKE+  +L KMPKPK  P
Sbjct:   74 ARNSLKCIDPLLLAPTCLFLASKVEEFGVISNSRLITTCQTVVKNKFSYAY-SQEFPYRTNHILECEFYLLENLDCCLIVYQPYRPLLQLIQDMGHEEQLLTLAWRIVNDSLRTDVCLLYPPYQIAIGSLQVACVVLQKDHKAWFAELNVDIEKIQEIARYIINLFELWKQYDEKKEIRELLTKMPKPKPAP 264

[Close]

BLAST of EMLSAG00000000139 vs. nr
Match: gi|1061485794|gb|ODN02914.1| (Cyclin-C [Orchesella cincta])

HSP 1 Score: 289.656 bits (740), Expect = 7.839e-92
Identity = 133/212 (62.74%), Postives = 168/212 (79.25%), Query Frame = 0

Query:  264 STSSQL-SSSSPQCIDPLLLSPTAIFLASKVEEFGVISNTRLINTCTTVIKNKFSYAYPNQDFPYRANNILECEFYLLENLDCCMVVFLPYRPLVQFSQDLNVEESVLPIAWRVVNDSLRTDVCLLYPPYLIALASLHIACVIMNKDCTQWFXXLNVDLEKVQDISKYIINLYELQKNFDEKKEMGGILGKMPKPKIXPPTLPSAPSHNMPH 474
            +T+S+  + +S +CIDPLLL+PTAIFLASKVEEFGVISN+RL+ TC  V+KNKF+YAY  Q+FPYR N+ILECEFYLLEN+DCC++V+ PYRPLV F QD+  EE +LP AWR+VNDSLRTD CLLYPPY IALA L +ACV+M KD   WF  + VD+EK+Q+I +YI++ Y+L KN+DEKKE+  +L KMPKPK  P   PS+     P+
Sbjct:   55 ATASRFYARNSLKCIDPLLLAPTAIFLASKVEEFGVISNSRLVTTCHQVVKNKFNYAYA-QEFPYRTNHILECEFYLLENMDCCLIVYQPYRPLVHFVQDMGYEEQLLPTAWRMVNDSLRTDTCLLYPPYQIALACLMMACVVMQKDTKSWFADIGVDMEKIQEICRYILSFYDLTKNYDEKKEVQALLAKMPKPKTQPSRPPSSQQPQDPN 265

[Close]

BLAST of EMLSAG00000000139 vs. nr
Match: gi|1133431698|ref|XP_019871879.1| (PREDICTED: cyclin-C [Aethina tumida])

HSP 1 Score: 288.886 bits (738), Expect = 8.495e-92
Identity = 133/192 (69.27%), Postives = 160/192 (83.33%), Query Frame = 0

Query:  270 SSSSPQCIDPLLLSPTAIFLASKVEEFGVISNTRLINTCTTVIKNKFSYAYPNQDFPYRANNILECEFYLLENLDCCMVVFLPYRPLVQFSQDLNVEESVLPIAWRVVNDSLRTDVCLLYPPYLIALASLHIACVIMNKDCTQWFXXLNVDLEKVQDISKYIINLYELQKNFDEKKEMGGILGKMPKPKIXP 461
            + +S +CIDPLLL+PT IFLASKVEEFGVISN+RLI TC TVIKNKFSYAY  Q+FPYR N+ILECEFYLLENLDCC++V+ PYRPL+Q  QD+  EE +L ++WR+VNDSLRTDV LLYPPY IA+  L IACVI+ KD   WF  LNVD+EK+Q+I++YIINL+EL K +DEKKE+ G+L KMPKPK  P
Sbjct:   74 ARNSLKCIDPLLLAPTCIFLASKVEEFGVISNSRLITTCQTVIKNKFSYAY-TQEFPYRTNHILECEFYLLENLDCCLIVYQPYRPLLQLVQDIGQEEQLLTLSWRIVNDSLRTDVSLLYPPYQIAIGCLQIACVILQKDHKAWFAELNVDIEKIQEIARYIINLFELWKTYDEKKEIQGLLAKMPKPKPAP 264

[Close]

BLAST of EMLSAG00000000139 vs. nr
Match: gi|1058179862|gb|JAS93579.1| (hypothetical protein g.28259, partial [Homalodisca liturata])

HSP 1 Score: 288.5 bits (737), Expect = 9.683e-92
Identity = 130/192 (67.71%), Postives = 161/192 (83.85%), Query Frame = 0

Query:  270 SSSSPQCIDPLLLSPTAIFLASKVEEFGVISNTRLINTCTTVIKNKFSYAYPNQDFPYRANNILECEFYLLENLDCCMVVFLPYRPLVQFSQDLNVEESVLPIAWRVVNDSLRTDVCLLYPPYLIALASLHIACVIMNKDCTQWFXXLNVDLEKVQDISKYIINLYELQKNFDEKKEMGGILGKMPKPKIXP 461
            + +S +CIDPLLL+PT +FLASKVEEFGVISN+RLI TC TV+KNKF+YAY +Q+FPYR N+ILECEFYLLENLDCC++V+ PYRPL+Q  QD+  EE +L +AWRV+NDSLRTDVCLLYPPY IA+  L IACVI+ KD   WF  LNVD+EK+Q+I+KY+INL+EL K +DEKK++  +L KMPKPK  P
Sbjct:   75 ARNSLKCIDPLLLAPTCVFLASKVEEFGVISNSRLITTCQTVVKNKFNYAY-SQEFPYRTNHILECEFYLLENLDCCLIVYQPYRPLLQLIQDIGHEEQLLALAWRVINDSLRTDVCLLYPPYQIAIGCLQIACVILQKDLKSWFAELNVDIEKIQEIAKYVINLFELWKTYDEKKDIQALLAKMPKPKTQP 265

[Close]

BLAST of EMLSAG00000000139 vs. nr
Match: gi|1058210802|gb|JAT08917.1| (hypothetical protein g.2668 [Graphocephala atropunctata])

HSP 1 Score: 288.5 bits (737), Expect = 1.066e-91
Identity = 130/192 (67.71%), Postives = 161/192 (83.85%), Query Frame = 0

Query:  270 SSSSPQCIDPLLLSPTAIFLASKVEEFGVISNTRLINTCTTVIKNKFSYAYPNQDFPYRANNILECEFYLLENLDCCMVVFLPYRPLVQFSQDLNVEESVLPIAWRVVNDSLRTDVCLLYPPYLIALASLHIACVIMNKDCTQWFXXLNVDLEKVQDISKYIINLYELQKNFDEKKEMGGILGKMPKPKIXP 461
            + +S +CIDPLLL+PT +FLASKVEEFGVISN+RLI TC TV+KNKF+YAY +Q+FPYR N+ILECEFYLLENLDCC++V+ PYRPL+Q  QD+  EE +L +AWRV+NDSLRTDVCLLYPPY IA+  L IACVI+ KD   WF  LNVD+EK+Q+I+KY+INL+EL K +DEKK++  +L KMPKPK  P
Sbjct:   74 ARNSLKCIDPLLLAPTCVFLASKVEEFGVISNSRLITTCQTVVKNKFNYAY-SQEFPYRTNHILECEFYLLENLDCCLIVYQPYRPLLQLIQDIGHEEQLLALAWRVINDSLRTDVCLLYPPYQIAIGCLQIACVILQKDLKSWFAELNVDIEKIQEIAKYVINLFELWKTYDEKKDIQALLAKMPKPKTQP 264

[Close]

BLAST of EMLSAG00000000139 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold2471_size15358-snap-gene-0.6 (protein:Tk06066 transcript:maker-scaffold2471_size15358-snap-gene-0.6-mRNA-1 annotation:"Cyclin-C")

HSP 1 Score: 286.96 bits (733), Expect = 9.749e-95
Identity = 133/183 (72.68%), Postives = 157/183 (85.79%), Query Frame = 0

Query:  270 SSSSPQCIDPLLLSPTAIFLASKVEEFGVISNTRLINTCTTVIKNKFSYAYPNQDFPYRANNILECEFYLLENLDCCMVVFLPYRPLVQFSQDLNVEESVLPIAWRVVNDSLRTDVCLLYPPYLIALASLHIACVIMNKDCTQWFXXLNVDLEKVQDISKYIINLYELQKNFDEKKEMGGILG 452
            S +S +C+DPLLL+PT+IFLASKVEEFGVISNTRLINTC+TVIKNKF+YAYPNQDFPYRANNILECEFYLLEN+DCC+VVF PYRPLVQ+ QDL +E+ +L  AWR+VNDSLRTDV LL+PPY IALA +H+AC     D   WF  LNVDL+K+Q+I K+I+NLYEL K+F+EKKEM  IL 
Sbjct:   74 SQNSLKCVDPLLLAPTSIFLASKVEEFGVISNTRLINTCSTVIKNKFAYAYPNQDFPYRANNILECEFYLLENMDCCLVVFQPYRPLVQYCQDLGLED-ILGAAWRLVNDSLRTDVSLLFPPYQIALACIHMACTAKGVDAKSWFAELNVDLDKIQEICKFILNLYELWKSFEEKKEMSSILA 255

[Close]

BLAST of EMLSAG00000000139 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold1193_size56161-snap-gene-0.13 (protein:Tk04081 transcript:maker-scaffold1193_size56161-snap-gene-0.13-mRNA-1 annotation:"cyclin l")

HSP 1 Score: 50.8322 bits (120), Expect = 4.311e-7
Identity = 32/95 (33.68%), Postives = 53/95 (55.79%), Query Frame = 0

Query:  356 LVQFSQDLNVEESVLPIAWRVVNDSLRTDVCLLYPPYLIALASLHIAC----VIMNKDCTQWFXXLNVDLEKVQDISKYIINLYELQKNFDEKKE 446
            L    Q  N+E  +L ++W  +NDSLRTDV + YPP  IA+A ++++     + M K+   WF  + V+ + ++D    +I LY  +K   E+ E
Sbjct:    1 LRWLEQQENIE--LLQMSWNFMNDSLRTDVFVRYPPETIAVACIYLSARKLRIAMPKNPA-WFDVIGVEEDDIKDCCYRMICLYNEKKPNQEELE 92

The following BLAST results are available for this feature:

BLAST of EMLSAG00000000139 vs. GO
BLAST of EMLSAG00000000139 vs. C. finmarchicus
BLAST of EMLSAG00000000139 vs. L. salmonis peptides
BLAST of EMLSAG00000000139 vs. SwissProt
BLAST of EMLSAG00000000139 vs. Select Arthropod Genomes
BLAST of EMLSAG00000000139 vs. nr
BLAST of EMLSAG00000000139 vs. Tigriopus kingsejongenis genes

BLAST of EMLSAG00000000139 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 25


Match Name	E-value	Identity	Description
-	1.322e-79	54.46	symbol:CCNC "Uncharacterized protein" species:9823...	[more]
-	2.371e-78	61.54	symbol:Ccnc "Cyclin-C" species:10116 "Rattus norve...	[more]
-	2.371e-78	61.54	symbol:Ccnc "cyclin C" species:10116 "Rattus norve...	[more]
-	9.452e-78	54.02	symbol:CCNC "Cyclin-C" species:9606 "Homo sapiens"...	[more]
-	1.181e-77	57.84	symbol:ccnc "cyclin C" species:7955 "Danio rerio" ...	[more]
-	1.358e-72	61.96	symbol:CCNC "Cyclin-C" species:9606 "Homo sapiens"...	[more]
-	4.568e-58	44.59	symbol:MED20 "Mediator complex subunit 20" species...	[more]
-	3.133e-54	53.61	symbol:CCNC "Cyclin C, isoform CRA_c" species:9606...	[more]
-	7.782e-42	39.23	symbol:MED20 "Uncharacterized protein" species:991...	[more]
-	1.840e-41	39.71	symbol:Med20 "Mediator of RNA polymerase II transc...	[more]

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BLAST of EMLSAG00000000139 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 17


Match Name	E-value	Identity	Description
gi\|592859527\|gb\|GAXK01098035.1\|	3.722e-89	69.84	TSA: Calanus finmarchicus comp39507_c2_seq1 transc...	[more]
gi\|592766039\|gb\|GAXK01188529.1\|	1.463e-9	30.00	TSA: Calanus finmarchicus comp11164_c1_seq1 transc...	[more]
gi\|592926319\|gb\|GAXK01032115.1\|	3.517e-4	23.81	TSA: Calanus finmarchicus comp20533_c0_seq1 transc...	[more]
gi\|592881732\|gb\|GAXK01076372.1\|	3.410e-2	20.29	TSA: Calanus finmarchicus comp98023_c0_seq1 transc...	[more]
gi\|592788859\|gb\|GAXK01165709.1\|	3.737e-2	29.13	TSA: Calanus finmarchicus comp144_c117_seq26 trans...	[more]
gi\|592788942\|gb\|GAXK01165626.1\|	7.080e-2	29.13	TSA: Calanus finmarchicus comp144_c88_seq14 transc...	[more]
gi\|592788872\|gb\|GAXK01165696.1\|	7.137e-2	29.13	TSA: Calanus finmarchicus comp144_c117_seq13 trans...	[more]
gi\|592788943\|gb\|GAXK01165625.1\|	7.137e-2	29.13	TSA: Calanus finmarchicus comp144_c88_seq13 transc...	[more]
gi\|592788874\|gb\|GAXK01165694.1\|	7.543e-2	29.13	TSA: Calanus finmarchicus comp144_c117_seq11 trans...	[more]
gi\|592788945\|gb\|GAXK01165623.1\|	7.543e-2	29.13	TSA: Calanus finmarchicus comp144_c88_seq11 transc...	[more]

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BLAST of EMLSAG00000000139 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 3


Match Name	E-value	Identity	Description
EMLSAP00000000139	0.000e+0	100.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s1021:5489...	[more]
EMLSAP00000006168	1.762e-125	88.73	pep:novel supercontig:LSalAtl2s:LSalAtl2s336:63801...	[more]
EMLSAP00000000197	9.827e-10	24.60	pep:novel supercontig:LSalAtl2s:LSalAtl2s1029:2074...	[more]

BLAST of EMLSAG00000000139 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|82082346\|sp\|Q5ZKY9.1\|MED20_CHICK	1.721e-38	39.42	RecName: Full=Mediator of RNA polymerase II transc...	[more]
gi\|75014141\|sp\|Q86KE7.1\|CCNC_DICDI	1.625e-31	33.63	RecName: Full=Cyclin-C	[more]
gi\|3334144\|sp\|P93411.1\|CCC11_ORYSJ	1.709e-29	38.80	RecName: Full=Cyclin-C1-1; Short=CycC1;1	[more]
gi\|75309141\|sp\|Q9FJK7.1\|CCC12_ARATH	3.686e-27	31.80	RecName: Full=Cyclin-C1-2; Short=CycC1;2	[more]
gi\|75024894\|sp\|Q9TYP2.2\|CCNC_CAEEL	7.823e-27	33.33	RecName: Full=Cyclin-C	[more]

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BLAST of EMLSAG00000000139 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 25


Match Name	E-value	Identity	Description
gb\|KYB28405.1\|	3.208e-95	68.75	Cyclin-C-like protein [Tribolium castaneum]	[more]
gb\|KFM76147.1\|	4.543e-92	60.63	Cyclin-C, partial [Stegodyphus mimosarum]	[more]
EAA08619.2	7.359e-89	65.63	AGAP004240-PA [Anopheles gambiae str. PEST]	[more]
XP_395475.2	2.170e-88	63.73	PREDICTED: cyclin-C [Apis mellifera]	[more]
EEB17418.1	9.745e-88	64.95	G1/S-specific cyclin-C, putative [Pediculus humanu...	[more]
gb\|EEC16263.1\|	1.873e-87	51.91	Cdk activating kinase, putative, partial [Ixodes s...	[more]
EFX88680.1	3.509e-86	63.02	G1/S-specific cyclin C-like protein [Daphnia pulex...	[more]
AAF55109.1	9.598e-82	65.05	cyclin C [Drosophila melanogaster]	[more]
XP_001121318.2	8.484e-66	53.14	PREDICTED: mediator of RNA polymerase II transcrip...	[more]
EEB15770.1	4.322e-65	51.71	mediator complex subunit, putative [Pediculus huma...	[more]

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BLAST of EMLSAG00000000139 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25


Match Name	E-value	Identity	Description
gi\|225717678\|gb\|ACO14685.1\|	1.830e-113	81.46	Cyclin-C [Caligus clemensi]	[more]
gi\|585669531\|ref\|XP_006817695.1\|	1.717e-93	60.78	PREDICTED: cyclin-C-like [Saccoglossus kowalevskii...	[more]
gi\|1069821358\|ref\|XP_018333610.1\|	8.652e-93	70.31	PREDICTED: cyclin-C isoform X1 [Agrilus planipenni...	[more]
gi\|91093000\|ref\|XP_968481.1\|	1.569e-92	68.75	PREDICTED: cyclin-C [Tribolium castaneum] >gi\|1004...	[more]
gi\|1058200058\|gb\|JAT03678.1\|	6.375e-92	63.08	hypothetical protein g.28258, partial [Homalodisca...	[more]
gi\|1059380389\|ref\|XP_017780263.1\|	6.768e-92	68.23	PREDICTED: cyclin-C [Nicrophorus vespilloides]	[more]
gi\|1061485794\|gb\|ODN02914.1\|	7.839e-92	62.74	Cyclin-C [Orchesella cincta]	[more]
gi\|1133431698\|ref\|XP_019871879.1\|	8.495e-92	69.27	PREDICTED: cyclin-C [Aethina tumida]	[more]
gi\|1058179862\|gb\|JAS93579.1\|	9.683e-92	67.71	hypothetical protein g.28259, partial [Homalodisca...	[more]
gi\|1058210802\|gb\|JAT08917.1\|	1.066e-91	67.71	hypothetical protein g.2668 [Graphocephala atropun...	[more]

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BLAST of EMLSAG00000000139 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 2


Match Name	E-value	Identity	Description
maker-scaffold2471_size15358-snap-gene-0.6	9.749e-95	72.68	protein:Tk06066 transcript:maker-scaffold2471_size...	[more]
maker-scaffold1193_size56161-snap-gene-0.13	4.311e-7	33.68	protein:Tk04081 transcript:maker-scaffold1193_size...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s1021	supercontig	LSalAtl2s1021:54890..58082 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016
Blast vs. GO	2014-04-02
TblastN vs C. finmarchicus TSA	2014-05-09
Blastp vs. self	2014-05-10
Blastp vs. SwissProt	2017-02-10
Blastp vs. Selected Arthropods	2017-02-20
Blastp vs. NR (2/2017)	2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins	2018-04-18

Properties


Property Name	Value
Logic name	ensemblgenomes
Description	maker-LSalAtl2s1021-augustus-gene-0.33
Biotype	protein_coding
Evidence	IEA
Note	Cyclin-C

Cross References

External references for this gene


Database	Accession
Ensembl Metazoa (gene)	EMLSAG00000000139 (primary cross-reference)

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
EMLSAT00000000139	EMLSAT00000000139-695986	Lepeophtheirus salmonis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at LSalAtl2s1021:54890..58082-

gene from alignment at LSalAtl2s1021:54890..58082-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAG00000000139-682905 ID=EMLSAG00000000139-682905|Name=EMLSAG00000000139|organism=Lepeophtheirus salmonis|type=gene|length=3193bp|location=Sequence derived from alignment at LSalAtl2s1021:54890..58082- (Lepeophtheirus salmonis)
ATGATTTTAATTTTTGTTATTTGGTTAATTAAAATTCAAATGAAAAGGAA
TCTACAGTTCCAGTTGTACATATAGGGGAGACGTGCACAAGAATTTATGG
CCATCATCGGTCACAAACTTAATATTGGGAATATAGTAGAGATTAATAGT
CTATTTCTTTATAACAGATCCATTTCATGTACTAATTCTGCATGAGTAAT
CTACAATGGAGAAGAATCAGTATTAACTAAATAACTTCTACTCGTTATGA
TTATGATTTACGACAAAATGAACAAAATGATATCATTTCACTATGTCTAA
TTTACAAATAGTTTTAGTTAAAATATTTTATAAATCTACAACTCTACAGA
AATTTACCTGCAACAATCAACTCTATCCTGGAGAAAGCAAGAAGAATATA
AAAATGTAATTCAAATAAAGTATTAAGCTACACAGTGGTTTTTTTTTATG
ATGTATTGGTTGGCTAATAAGAGAGCAACTAAGAGCTAGATAATTTCAGA
CTCAGACAGTGTGAATCATCGAAACACAAATAGCAATTTAAAAAAATAGT
ATTTGATAAAACTGACCCAGTCTTACCTACTTAGTGATGATACACAATTA
TAAAAGCGGGAATATAATATTTACTGAGAAGTTAGAACTAATTCTCATGA
CGTCATTCCCTTTTAAATATTTCTATGACTTAAAGTAGCCAGCTAGTTTC
GTTACAAACATATGTAATCATTGAGTTACTATTGATTACTAATAATTAAA
TATTATCAGACGCTGAAAACATTTTTTTACTCCCACATTTGTTTCCTTCT
ATATCAGTACAAACTAAAAAAATACCAGAAACGTCAACGTTTACATGTTA
CAAACATAGAAGAGGCACAAAAAATAAAAATTAATTTCATTTTTTTAAAG
TGTAATTACTTTTTAAACTAATGAATTATATGAATTTCCATCCTTTAAAA
AAAGATAAAAGGTTGCGTTAGTATATAAAAAGTAAATAAAACTTTTATCT
AGCTATCAAATAATAAACATAACTTTCAATGAAACTTGTGACGTCATATT
GTGAGGATGCCTATATTTTTTGTCTGTGATAACTTAAAAAAGTGAACACA
ATTAATAAATAATAATTTAAGGTTTATCCAACAATTATATGTTATTTCAA
ATTTGGATACCAACGAAATTATACAGTCAATAAACAACACAGATATTTAC
ATCCCTGGATTCATTTTTTTTTCATTTTTTGTAACGTGCCTAGTTAAAGT
TAATATATAATTATTAATTTCTTATCGGTATTGGCTTYAAACTTTTKTTC
CATTAAGGKATTATAAAATATAACTTAGCTATAAGGCATGTATTAATTTT
CAAGTATATTTAATTTATAAAGGATTGAAGATGGAGCTTCATTTTCCCGT
ACCTATTTTTTGAGAATTAAGGAGAATGTGAATACAAGTAACAATTTTAG
CTGCCAAGGAAACGCTTTCAACACTTTTTAGGGCATTTTAAGAGTTTTGG
AGTCATATTTTGGACATAGCTATAGCCCTGAAACTGAGATGTGCTAATTA
TCCCTATTCCATGGGCGTTACTGCACTCCTCGTATATCCACTTCCACAGG
ATAAAACAGCATCTCAAACCATTGAAATAATTCAGAAACGAATCCTCAAT
TTAGGTGCTAATCATACGGGACAATTTCTTGTGGATTGTGAGACCTACAT
CAATACTACAGTTCCATCAAAGGTTCTTCACKTTCTTCATAATTCAGASC
ASCCTGCCACTGTCTTTTCCATACTCGAATCTCCAGGAAAGCACTCTGTT
TCCTTCACTTCAGACACTCTCTTTGATCTCCTACTTCTCAAACTCTCTAA
TATTTATTCTAAGAAGTCAAAAATTGAATCTAAGGGACATCGCTTTGAAA
TTGGAGATTTTCTTGTCAAATTAGGGGTTGTGTCTTCTGCTGGATCCTTC
AAAGGTATTCTTATTGAGGTGGAATATATCCCTTGTTCCTTTATATCCTC
TTGTTGGAGCTTGATGGTAGAATTTATGCAGGGATTCCTTGGATCTATTG
TACCTAAAGAAATCCCATCCTGCATCAAAAATAAAGAATCCCCTGACGAA
ATTTTTACACCACTAGATACCATTCAATTATATTTGGAACAGTTTGGAAT
ACTGAAAAAAGTAACAACGAATTTGGCTGCTGGGKCCCAGATGTTAGGAC
CCMCTAGTTCACCYGCNACATCTACATCATCCCAGTTATCATCTTCTTCA
CCTCAAGTTCAAGCAACCCAATAATTATAATTTAACATGGCTGGKAATTT
TTGGACTAGTTCTCATCACGCCCAATGGATAMTGAATAAAACGGATTTGC
TTCGTGAGCGCCATGTGGATTTCCAAGTGATCAGTGAAGATGAATATCAA
AAAATAATCATTTTTTTTGCTAGTTTTATTCAAACACTTGGAGAGCAGCT
AAAGCTTAGACAACAAGTTATTGCTACAGCAACAGTATTTTTCAAGCGTT
TTTATTCTCAAAATTCCTTAAAGTGTATAGATCCATTGCTTTTGTCACCG
ACTGCGATATTTCTTGCGAGTAAAGTGGAAGAATTTGGAGTTATCTCCAA
CACCAGACTAATAAATACTTGTACAACTGTAATCAAGAATAAATTTTCTT
ATGCTTATCCCAATCAGGATTTCCCCTACAGGTAAATTTAATGTGTTTTT
TGTTTTTGTATACATAAAATTATTTATGTCTTATAATTCCATTTTTTTAA
GGGCAAACAATATCCTGGAATGTGAGTTTTATTTATTGGAAAACCTGGAT
TGTTGTATGGTTGTATTTTTGCCTTATCGACCCTTGGTCCAATTCTCCCA
GGATTTAAATGTGGAGGAGTCGGTTCTTCCTATAGCCTGGAGGGTTGTCA
ACGACTCACTTCGCACGGATGTTTGTCTTTTATATCCACCTTATTTAATA
GCTCTAGCTTCTTTACATATCGCTTGTGTCATCATGAATAAAGATTGTAC
ACAATGGTTTKCGGRTCTCAATGTTGATTTGGAAAAAGTTCAAGATATTT
CTAAATATATTATTAATTTGTATGAACTCCAAAAAAATTTTGACGAAAAA
AAAGAAATGGGTGGAATTTTAGGGAAAATGCCAAAACCTAAGATTCAMCC
TCCCACTCTCCCTTCCGCACCTTCACATAATATGCCTCACTAA

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