EMLSAG00000000189, EMLSAG00000000189-682955 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000189 vs. GO
Match: - (symbol:RNF216 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0032648 "regulation of interferon-beta production" evidence=IEA] [GO:0043161 "proteasome-mediated ubiquitin-dependent protein catabolic process" evidence=IEA] [GO:0050691 "regulation of defense response to virus by host" evidence=IEA] [GO:0070936 "protein K48-linked ubiquitination" evidence=IEA] InterPro:IPR002867 SMART:SM00647 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0008270 GO:GO:0070936 GO:GO:0050691 CTD:54476 KO:K11976 OMA:FPLQGSQ OrthoDB:EOG7B8S3G TreeFam:TF330852 GO:GO:0032648 GeneTree:ENSGT00510000048032 EMBL:AAEX03004296 EMBL:AAEX03004297 EMBL:AAEX03004298 RefSeq:XP_536887.2 Ensembl:ENSCAFT00000025386 GeneID:479760 KEGG:cfa:479760 Uniprot:E2R203) HSP 1 Score: 49.6766 bits (117), Expect = 7.885e-6 Identity = 30/129 (23.26%), Postives = 52/129 (40.31%), Query Frame = 0 Query: 32 GVQVRCLICWEDLYMEDVISCDGDHPVCRSCLTEGIKNQL-ADGLDNYICLNYGCEIPYQISDLETVMDHKMITKYIQTLCSNEVKSCGEFGLYTCSECNYAVTIDKEGLDVIKCQYQYCKALTCIHCQ 159 G + C C+ + E++ C H C+ CL + + G C+ C + S+LE V+ ++ KY + EV + L C C++ +D + + C C+ TC CQ Sbjct: 571 GQLIECRCCYGEFPFEELTQCADAHLFCKECLIRYAQEAVFGSGKSELSCMEGSCTCSFPTSELEKVLPQTILYKYYERKAEEEVTAAYADELVRCPSCSFPALLDSD-VKRFSCPNPRCRKETCRKCQ 698
BLAST of EMLSAG00000000189 vs. GO
Match: - (symbol:rnf216 "ring finger protein 216" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR002867 SMART:SM00647 ZFIN:ZDB-GENE-081104-199 GO:GO:0008270 CTD:54476 KO:K11976 OrthoDB:EOG7B8S3G TreeFam:TF330852 GeneTree:ENSGT00510000048032 EMBL:AL929031 RefSeq:XP_687871.3 UniGene:Dr.80082 Ensembl:ENSDART00000130058 Ensembl:ENSDART00000138783 GeneID:559441 KEGG:dre:559441 OMA:DIKWALN NextBio:20882967 Uniprot:E7F859) HSP 1 Score: 47.3654 bits (111), Expect = 4.433e-5 Identity = 29/130 (22.31%), Postives = 54/130 (41.54%), Query Frame = 0 Query: 32 GVQVRCLICWEDLYMEDVISCDGDHPVCRSCLTEGIKNQL-ADGLDNYICLNYGCEIPYQISDLETVMDHKMITKYIQTLCSNEVKSCGEFGLYTCSECNYAVTIDKEGLDVIKCQYQYCKALTCIHCQL 160 G + C C + E++ C H C+ CL + + + G C++ C + S+LE V+ ++ KY + V + L C CN+ +DK+ + + C C+ +C C + Sbjct: 483 GQLIECGCCCGEFAFEEMTQCTDGHLFCKECLVKYAQEAVFGSGRSELSCMDGNCTCSFPNSELEKVLPENILCKYYERQAEEAVAATCADELVRCPFCNFPALLDKD-VSLFSCPNPRCRKESCRKCHV 611
BLAST of EMLSAG00000000189 vs. GO
Match: - (symbol:LOC100625622 "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR002867 SMART:SM00647 GO:GO:0008270 OrthoDB:EOG7B8S3G TreeFam:TF330852 GeneTree:ENSGT00510000048032 EMBL:FP102569 EMBL:FP565408 Ensembl:ENSSSCT00000029070 OMA:FVPPRGR Uniprot:I3LPV9) HSP 1 Score: 45.8246 bits (107), Expect = 1.392e-4 Identity = 30/129 (23.26%), Postives = 51/129 (39.53%), Query Frame = 0 Query: 32 GVQVRCLICWEDLYMEDVISCDGDHPVCRSCLTEGIKNQ-LADGLDNYICLNYGCEIPYQISDLETVMDHKMITKYIQTLCSNEVKSCGEFGLYTCSECNYAVTIDKEGLDVIKCQYQYCKALTCIHCQ 159 G + C C+ + E++ C H C+ CL + G C+ C + S+LE V+ ++ KY + EV + L C C++ +D + + C C+ TC CQ Sbjct: 79 GQLIECRCCYGEFPFEELTQCADAHLFCKECLIRYAQEAVFGSGKSELSCMEGSCTCSFPASELEKVLPQTILYKYYERKAEEEVAAAYADELVRCPSCSFPALLDSD-VKRFSCPNPRCRKETCRKCQ 206
BLAST of EMLSAG00000000189 vs. GO
Match: - (symbol:Rnf216 "ring finger protein 216" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA] [GO:0032648 "regulation of interferon-beta production" evidence=IEA;ISO] [GO:0043161 "proteasome-mediated ubiquitin-dependent protein catabolic process" evidence=IEA;ISO] [GO:0050691 "regulation of defense response to virus by host" evidence=IEA;ISO] [GO:0070936 "protein K48-linked ubiquitination" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR002867 SMART:SM00647 RGD:1565135 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0016874 GO:GO:0008270 GO:GO:0070936 EMBL:CH474012 GO:GO:0050691 CTD:54476 KO:K11976 OMA:FPLQGSQ OrthoDB:EOG7B8S3G TreeFam:TF330852 GO:GO:0032648 GeneTree:ENSGT00510000048032 EMBL:AABR06070529 EMBL:AABR06070530 EMBL:AABR06070531 EMBL:AABR06070532 EMBL:AABR06070533 EMBL:AABR06070534 RefSeq:NP_001100592.1 UniGene:Rn.162100 Ensembl:ENSRNOT00000001458 GeneID:304294 KEGG:rno:304294 NextBio:35570172 Uniprot:D3ZU60) HSP 1 Score: 45.0542 bits (105), Expect = 2.659e-4 Identity = 30/129 (23.26%), Postives = 52/129 (40.31%), Query Frame = 0 Query: 32 GVQVRCLICWEDLYMEDVISCDGDHPVCRSCLTEGIKNQL-ADGLDNYICLNYGCEIPYQISDLETVMDHKMITKYIQTLCSNEVKSCGEFGLYTCSECNYAVTIDKEGLDVIKCQYQYCKALTCIHCQ 159 G + C C+ + E++ C H C+ CL + + G C+ C + S+LE V+ ++ KY + EV + L C C++ +D + + C C+ TC CQ Sbjct: 555 GQLIECRCCYGEFPFEELTQCADAHLFCKECLIRYAQEAVFGSGKSELSCMEGSCTCSFPTSELEKVLPQTILYKYYERKAEEEVAAAYADELVRCPSCSFPALLDSD-VKRFSCPNPRCRKETCRKCQ 682
BLAST of EMLSAG00000000189 vs. GO
Match: - (symbol:Rnf216 "ring finger protein 216" species:10090 "Mus musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006915 "apoptotic process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA] [GO:0032648 "regulation of interferon-beta production" evidence=ISO] [GO:0043161 "proteasome-mediated ubiquitin-dependent protein catabolic process" evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA] [GO:0050691 "regulation of defense response to virus by host" evidence=ISO] [GO:0070936 "protein K48-linked ubiquitination" evidence=ISO] InterPro:IPR002867 SMART:SM00647 UniPathway:UPA00143 MGI:MGI:1344349 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0006915 GO:GO:0016874 GO:GO:0008270 GO:GO:0070936 GO:GO:0050691 CTD:54476 eggNOG:NOG330241 HOVERGEN:HBG102854 KO:K11976 OMA:FPLQGSQ OrthoDB:EOG7B8S3G TreeFam:TF330852 ChiTaRS:RNF216 GO:GO:0032648 EMBL:AY572785 EMBL:AY572786 EMBL:AK089775 EMBL:AK147861 EMBL:AK149741 EMBL:AK154368 EMBL:BC065066 EMBL:BC079540 EMBL:AF361000 RefSeq:NP_542128.2 RefSeq:NP_996993.1 RefSeq:XP_006504707.1 RefSeq:XP_006504708.1 UniGene:Mm.381440 UniGene:Mm.488397 ProteinModelPortal:P58283 SMR:P58283 BioGrid:223823 STRING:10090.ENSMUSP00000052563 PhosphoSite:P58283 PRIDE:P58283 Ensembl:ENSMUST00000053498 GeneID:108086 KEGG:mmu:108086 UCSC:uc009ajm.2 UCSC:uc009ajn.2 UCSC:uc009ajo.2 GeneTree:ENSGT00510000048032 InParanoid:P58283 NextBio:360032 PRO:PR:P58283 Bgee:P58283 CleanEx:MM_RNF216 Genevestigator:P58283 Uniprot:P58283) HSP 1 Score: 45.0542 bits (105), Expect = 3.082e-4 Identity = 30/129 (23.26%), Postives = 52/129 (40.31%), Query Frame = 0 Query: 32 GVQVRCLICWEDLYMEDVISCDGDHPVCRSCLTEGIKNQL-ADGLDNYICLNYGCEIPYQISDLETVMDHKMITKYIQTLCSNEVKSCGEFGLYTCSECNYAVTIDKEGLDVIKCQYQYCKALTCIHCQ 159 G + C C+ + E++ C H C+ CL + + G C+ C + S+LE V+ ++ KY + EV + L C C++ +D + + C C+ TC CQ Sbjct: 498 GQLIECRCCYGEFPFEELTQCADAHLFCKECLIRYAQEAVFGSGKSELSCMEGSCTCSFPTSELEKVLPQTILYKYYERKAEEEVAAAYADELVRCPSCSFPALLDSD-VKRFSCPNPRCRKETCRKCQ 625
BLAST of EMLSAG00000000189 vs. GO
Match: - (symbol:RNF216 "Uncharacterized protein" species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0032648 "regulation of interferon-beta production" evidence=IEA] [GO:0043161 "proteasome-mediated ubiquitin-dependent protein catabolic process" evidence=IEA] [GO:0050691 "regulation of defense response to virus by host" evidence=IEA] [GO:0070936 "protein K48-linked ubiquitination" evidence=IEA] InterPro:IPR002867 SMART:SM00647 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0008270 GO:GO:0070936 GO:GO:0050691 CTD:54476 KO:K11976 OMA:FPLQGSQ OrthoDB:EOG7B8S3G TreeFam:TF330852 GO:GO:0032648 GeneTree:ENSGT00510000048032 EMBL:DAAA02058349 RefSeq:NP_001180187.1 UniGene:Bt.43745 PRIDE:E1BHM7 Ensembl:ENSBTAT00000022820 GeneID:534455 KEGG:bta:534455 NextBio:20876406 Uniprot:E1BHM7) HSP 1 Score: 44.669 bits (104), Expect = 3.422e-4 Identity = 30/129 (23.26%), Postives = 52/129 (40.31%), Query Frame = 0 Query: 32 GVQVRCLICWEDLYMEDVISCDGDHPVCRSCLTEGIKNQL-ADGLDNYICLNYGCEIPYQISDLETVMDHKMITKYIQTLCSNEVKSCGEFGLYTCSECNYAVTIDKEGLDVIKCQYQYCKALTCIHCQ 159 G + C C+ + E++ C H C+ CL + + G C+ C + S+LE V+ ++ KY + EV + L C C++ +D + + C C+ TC CQ Sbjct: 513 GQLIECRCCYGEFPFEELTQCADAHLFCKECLIRYAQEAVFGSGKSELSCMEGSCTCSFPASELEKVLPQTILYKYYERKAEEEVAAAYADELVRCPSCSFPALLDSD-VKRFSCPNPRCRKETCRKCQ 640
BLAST of EMLSAG00000000189 vs. GO
Match: - (symbol:RNF216 "E3 ubiquitin-protein ligase RNF216" species:9606 "Homo sapiens" [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006915 "apoptotic process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016032 "viral process" evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA] [GO:0032648 "regulation of interferon-beta production" evidence=IDA] [GO:0043161 "proteasome-mediated ubiquitin-dependent protein catabolic process" evidence=IDA] [GO:0050691 "regulation of defense response to virus by host" evidence=IDA] [GO:0070936 "protein K48-linked ubiquitination" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002867 SMART:SM00647 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0005737 GO:GO:0016032 GO:GO:0043161 GO:GO:0006915 GO:GO:0016874 GO:GO:0008270 GO:GO:0070936 GO:GO:0050691 EMBL:AC008167 EMBL:AY062174 EMBL:AF513717 EMBL:AF513718 EMBL:AY177396 EMBL:AY177397 EMBL:AY177398 EMBL:BX537406 EMBL:BC000787 EMBL:BC063825 EMBL:AK000916 EMBL:AF228527 RefSeq:NP_996994.1 RefSeq:NP_996999.1 RefSeq:XP_005249842.1 UniGene:Hs.487458 UniGene:Hs.689456 ProteinModelPortal:Q9NWF9 SMR:Q9NWF9 BioGrid:119981 IntAct:Q9NWF9 MINT:MINT-1194402 STRING:9606.ENSP00000374552 PhosphoSite:Q9NWF9 DMDM:57015417 PaxDb:Q9NWF9 PRIDE:Q9NWF9 DNASU:54476 Ensembl:ENST00000389902 Ensembl:ENST00000425013 GeneID:54476 KEGG:hsa:54476 UCSC:uc003sox.2 UCSC:uc003soy.2 CTD:54476 GeneCards:GC07M005661 HGNC:HGNC:21698 HPA:HPA018955 HPA:HPA021123 MIM:212840 MIM:609948 neXtProt:NX_Q9NWF9 Orphanet:1173 PharmGKB:PA162401829 eggNOG:NOG330241 HOGENOM:HOG000154166 HOVERGEN:HBG102854 KO:K11976 OMA:FPLQGSQ OrthoDB:EOG7B8S3G TreeFam:TF330852 ChiTaRS:RNF216 GeneWiki:RNF216 GenomeRNAi:54476 NextBio:56786 PRO:PR:Q9NWF9 ArrayExpress:Q9NWF9 Bgee:Q9NWF9 CleanEx:HS_RNF216 Genevestigator:Q9NWF9 GO:GO:0032648 Uniprot:Q9NWF9) HSP 1 Score: 44.669 bits (104), Expect = 4.349e-4 Identity = 30/129 (23.26%), Postives = 53/129 (41.09%), Query Frame = 0 Query: 32 GVQVRCLICWEDLYMEDVISCDGDHPVCRSCLTEGIKNQL-ADGLDNYICLNYGCEIPYQISDLETVMDHKMITKYIQTLCSNEVKSCGEFGLYTCSECNYAVTIDKEGLDVIKCQYQYCKALTCIHCQ 159 G + C C+ + E++ C H C+ CL + + G C+ C + S+LE V+ ++ KY + EV + L C C++ +D + + C +C+ TC CQ Sbjct: 510 GQLIECRCCYGEFPFEELTQCADAHLFCKECLIRYAQEAVFGSGKLELSCMEGSCTCSFPTSELEKVLPQTILYKYYERKAEEEVAAAYADELVRCPSCSFPALLDSD-VKRFSCPNPHCRKETCRKCQ 637
BLAST of EMLSAG00000000189 vs. C. finmarchicus
Match: gi|592774417|gb|GAXK01180151.1| (TSA: Calanus finmarchicus comp914971_c0_seq2 transcribed RNA sequence) HSP 1 Score: 30.8018 bits (68), Expect = 3.929e+0 Identity = 24/83 (28.92%), Postives = 38/83 (45.78%), Query Frame = 0 Query: 120 EFGLYTCSECNYAVTIDKEGLDVIKCQYQYCKALTCIHCQLPAHPRE-------EPEIGKCPLQTNSEDLHNVERTSAARKTE 195 E + C +CN + ++G + + CQ C A +C C+ P +PE GKCPL T++ LH E A + + Sbjct: 226 EAMVRECVKCNTRF-LQEDGCNKMTCQ---CGATSCYICRKPVADYSHFYGQGGQPEPGKCPLYTDNVKLHRNEVKEAVQAAK 462
BLAST of EMLSAG00000000189 vs. C. finmarchicus
Match: gi|592774418|gb|GAXK01180150.1| (TSA: Calanus finmarchicus comp914971_c0_seq1 transcribed RNA sequence) HSP 1 Score: 30.4166 bits (67), Expect = 4.184e+0 Identity = 24/87 (27.59%), Postives = 39/87 (44.83%), Query Frame = 0 Query: 120 EFGLYTCSECNYAVTIDKEGLDVIKCQYQYCKALTCIHCQLPAHPRE-------EPEIGKCPLQTNSEDLHNVERTSAARKTEATFD 199 E + C +CN + ++G + + CQ C A +C C+ P +PE GKCPL T++ LH E A + + + Sbjct: 257 EAMVRECVKCNTRF-LQEDGCNKMTCQ---CGATSCYICRKPVADYSHFYGQGGQPEPGKCPLYTDNVKLHRNEVKEAVQAAKRQMN 505
BLAST of EMLSAG00000000189 vs. C. finmarchicus
Match: gi|592927905|gb|GAXK01030580.1| (TSA: Calanus finmarchicus comp116313_c3_seq1 transcribed RNA sequence) HSP 1 Score: 29.6462 bits (65), Expect = 8.949e+0 Identity = 31/145 (21.38%), Postives = 57/145 (39.31%), Query Frame = 0 Query: 37 CLICWEDLYMED---VISCDGDHPVCRSCLTEGIKNQLADG-LDNYICLNYGCE---IPYQISDLETVMDHKMITKYIQTLCSNEVKSCGEFGLYTCSECNYAVTIDKEGLDVIKCQYQYCKALTCIHCQLPAHPREEPEIGKCP 174 CLIC+ D + C+ H C+ C+ K +++ G + + +C + C+ +P Q+++L + H + KY L +++S DV+ C + CQ P E +G+CP Sbjct: 1751 CLICFTDKIGSQCLRFVVCN--HVYCKDCMANYFKEKISTGAVSSLMCPTFKCDTQALPNQVAEL---VPHDLFQKYESLLLETQLESM---------------------TDVVNCPR--------VVCQCPTMIDRETNMGQCP 2083
BLAST of EMLSAG00000000189 vs. C. finmarchicus
Match: gi|592912685|gb|GAXK01045690.1| (TSA: Calanus finmarchicus comp995558_c0_seq1 transcribed RNA sequence) HSP 1 Score: 29.6462 bits (65), Expect = 9.128e+0 Identity = 35/145 (24.14%), Postives = 54/145 (37.24%), Query Frame = 0 Query: 36 RCLICWEDLY---MEDVISCDGDHPVCRSCLTEGIKNQLADGLDNYI-CLNYGCEIPYQISDLETVMDHKMITKYIQTLCSNEVKSCGEFGLYTCSECNYAVTIDKEGLDVIKCQYQYCKALTCIHCQLPAHPRE-EPEIGKCPL 175 +C IC DL E + SC H C SCL + + + DG I C + C +I + ++ ++ KY L + F + + S + +D CQ PA EP +GKCP+ Sbjct: 1011 KCEICLTDLLGKQFEVLSSCS--HAFCHSCLGQYCETHIKDGSSRTIDCPDPSCRSKVEIGVVHKLVSKELFEKYDMNLLT--------FAIRSMSGSVWCPILD---------------------CQQPAQVFSMEPHLGKCPV 1352
BLAST of EMLSAG00000000189 vs. C. finmarchicus
Match: gi|592927904|gb|GAXK01030581.1| (TSA: Calanus finmarchicus comp116313_c3_seq2 transcribed RNA sequence) HSP 1 Score: 29.6462 bits (65), Expect = 9.688e+0 Identity = 31/145 (21.38%), Postives = 57/145 (39.31%), Query Frame = 0 Query: 37 CLICWEDLYMED---VISCDGDHPVCRSCLTEGIKNQLADG-LDNYICLNYGCE---IPYQISDLETVMDHKMITKYIQTLCSNEVKSCGEFGLYTCSECNYAVTIDKEGLDVIKCQYQYCKALTCIHCQLPAHPREEPEIGKCP 174 CLIC+ D + C+ H C+ C+ K +++ G + + +C + C+ +P Q+++L + H + KY L +++S DV+ C + CQ P E +G+CP Sbjct: 1739 CLICFTDKIGSQCLRFVVCN--HVYCKDCMANYFKEKISTGAVSSLMCPTFKCDTQALPNQVAEL---VPHDLFQKYESLLLETQLESM---------------------TDVVNCPR--------VVCQCPTMIDRETNMGQCP 2071
BLAST of EMLSAG00000000189 vs. L. salmonis peptides
Match: EMLSAP00000000189 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1029:145437:146295:-1 gene:EMLSAG00000000189 transcript:EMLSAT00000000189 description:"maker-LSalAtl2s1029-snap-gene-1.49") HSP 1 Score: 443.736 bits (1140), Expect = 8.469e-160 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0 Query: 1 MFPEKDEFELTSLLKSYPGKYMEGLIDKILQGVQVRCLICWEDLYMEDVISCDGDHPVCRSCLTEGIKNQLADGLDNYICLNYGCEIPYQISDLETVMDHKMITKYIQTLCSNEVKSCGEFGLYTCSECNYAVTIDKEGLDVIKCQYQYCKALTCIHCQLPAHPREEPEIGKCPLQTNSEDLHNVERTSAARKTEATFDHQLSLPRPSTSYASY 214 MFPEKDEFELTSLLKSYPGKYMEGLIDKILQGVQVRCLICWEDLYMEDVISCDGDHPVCRSCLTEGIKNQLADGLDNYICLNYGCEIPYQISDLETVMDHKMITKYIQTLCSNEVKSCGEFGLYTCSECNYAVTIDKEGLDVIKCQYQYCKALTCIHCQLPAHPREEPEIGKCPLQTNSEDLHNVERTSAARKTEATFDHQLSLPRPSTSYASY Sbjct: 1 MFPEKDEFELTSLLKSYPGKYMEGLIDKILQGVQVRCLICWEDLYMEDVISCDGDHPVCRSCLTEGIKNQLADGLDNYICLNYGCEIPYQISDLETVMDHKMITKYIQTLCSNEVKSCGEFGLYTCSECNYAVTIDKEGLDVIKCQYQYCKALTCIHCQLPAHPREEPEIGKCPLQTNSEDLHNVERTSAARKTEATFDHQLSLPRPSTSYASY 214
BLAST of EMLSAG00000000189 vs. L. salmonis peptides
Match: EMLSAP00000000174 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1025:66939:67244:-1 gene:EMLSAG00000000174 transcript:EMLSAT00000000174 description:"augustus_masked-LSalAtl2s1025-processed-gene-0.4") HSP 1 Score: 99.7525 bits (247), Expect = 1.080e-26 Identity = 55/85 (64.71%), Postives = 61/85 (71.76%), Query Frame = 0 Query: 138 EGLDVIKCQYQYCKALTCIHCQLPAHPR--------EEPEIGKCPLQTNSEDLHNVERTSAARKTEATFDHQLSLPRPSTSYASY 214 +G + I+C C A C C+ P E+PEIGKCPLQTNSEDLH+VERTSAARKTEATFDHQLSLPRPSTSYASY Sbjct: 20 DGCNRIQC---ICGAQMCYICKKKIQPNYDHFYDFPEKPEIGKCPLQTNSEDLHHVERTSAARKTEATFDHQLSLPRPSTSYASY 101
BLAST of EMLSAG00000000189 vs. L. salmonis peptides
Match: EMLSAP00000011520 (pep:novel supercontig:LSalAtl2s:LSalAtl2s799:201864:202839:-1 gene:EMLSAG00000011520 transcript:EMLSAT00000011520 description:"maker-LSalAtl2s799-snap-gene-2.21") HSP 1 Score: 85.5001 bits (210), Expect = 2.755e-20 Identity = 51/169 (30.18%), Postives = 82/169 (48.52%), Query Frame = 0 Query: 43 DLYMEDVISCDGDHPVCRSCLTEGIKNQLADGLDNYICLNYGCEIPYQISDLETVMDHKMITKYIQTLCSNEVKSCGEFGLYTCSECNYAVTIDKEGLDVIKCQYQYCKALTCIHCQLPAHPREEPEIGKCPLQTNSEDLHNVERTSAARKTEATFDHQLSLPRPSTSY 211 D + +++SC G H C+ C +G + + Y C CE + L +++ K+ +KY+Q +C E+KSC F L C EC+Y V I+ E + +I+CQY++C +C C+ AH E C L + D H V A + +EA S +P + Sbjct: 2 DKLIHEIVSCPGGHFFCKDCARKGCEGLVQGSRIVYKCFEPKCEEAFDTQTLSELINPKLFSKYVQGICKEEIKSC--FKLEDCPECDYGVVIEDESIMIIECQYEFCGVRSCRRCKKRAHKLGES----CSLSDS--DNHFV----ANKMSEAVIRRCYSCKKPYQKF 158
BLAST of EMLSAG00000000189 vs. L. salmonis peptides
Match: EMLSAP00000011518 (pep:novel supercontig:LSalAtl2s:LSalAtl2s799:200476:201189:-1 gene:EMLSAG00000011518 transcript:EMLSAT00000011518 description:"augustus_masked-LSalAtl2s799-processed-gene-2.0") HSP 1 Score: 74.3294 bits (181), Expect = 1.922e-16 Identity = 38/111 (34.23%), Postives = 61/111 (54.95%), Query Frame = 0 Query: 70 QLADGLDNYICLNYGCEIPYQISDLETVMDHKMITKYIQTLCSNEVKSCGEFGLYTCSECNYAVTID----------------KEGLDVIKCQYQYCKALTCIHCQLPAHP 164 Q ++G ++Y CL C + + L+++++ K +KY+Q +C NEVK CG L +C ECN+AV I+ + VI+C+Y YCK ++C C+ AHP Sbjct: 4 QKSEGNEDYRCLLPECPEGFDLGLLQSLINPKWFSKYVQNICMNEVKKCGSLVLESCPECNFAVNIEGMSIFRTHILFISLLLDPSVKVIECKYDYCKVMSCRKCRKRAHP 114 HSP 2 Score: 54.6842 bits (130), Expect = 1.677e-9 Identity = 30/70 (42.86%), Postives = 42/70 (60.00%), Query Frame = 0 Query: 138 EGLDVIKCQYQYCKALTCIHCQLPAHP--------REEPEIGKCPLQTNSEDLHNVERTSAARKTEATFD 199 EG + I+C +C A C C+ P P +E+PE GKCPLQ+NSEDLH++ER A +K ++ D Sbjct: 154 EGCNRIEC---HCGAQMCYICRSPVIPSQDHFYNCQEQPEPGKCPLQSNSEDLHSMERAIAGKKVVSSID 220
BLAST of EMLSAG00000000189 vs. L. salmonis peptides
Match: EMLSAP00000011519 (pep:novel supercontig:LSalAtl2s:LSalAtl2s799:201458:201745:-1 gene:EMLSAG00000011519 transcript:EMLSAT00000011519 description:"augustus_masked-LSalAtl2s799-processed-gene-2.1") HSP 1 Score: 64.6994 bits (156), Expect = 6.220e-14 Identity = 29/63 (46.03%), Postives = 43/63 (68.25%), Query Frame = 0 Query: 1 MFPEKDEFELTSLLKSYPGKYMEGLIDKIL-QGVQVRCLICWEDLYMEDVISCDGDHPVCRSC 62 +FP++D L+S L YPGK++EGLI+ IL QV+C +CWE+ ++E+ +SC H CR C Sbjct: 31 LFPDRDVNILSSYLLKYPGKHIEGLIEIILGNDSQVKCEVCWEEYFLENTVSCVNSHFFCRDC 93
BLAST of EMLSAG00000000189 vs. Select Arthropod Genomes
Match: gb|KYB28775.1| (hypothetical protein TcasGA2_TC032478 [Tribolium castaneum]) HSP 1 Score: 59.6918 bits (143), Expect = 1.124e-9 Identity = 36/133 (27.07%), Postives = 65/133 (48.87%), Query Frame = 0 Query: 32 GVQVRCLICW-EDLYMEDVISCDGDHPVCRSCLTEGIKNQLADGLDNYICLNYGCEIPYQISDLETVMDHKMITKYIQTLCSNEVKSCGEFGLYTCSECNYAVTIDKEGLDVIKCQYQYCKALTCIHCQLPAH 163 G+ C C+ E++ ++ +C + C+SC+ + ++ +G ++ CL CE + + L+ V+ K+ +K Q E+KS G L C C++A TI EG + C C +C C+ P+H Sbjct: 689 GLMQTCNCCYDEEVLPREIYTCQNNCEFCKSCIVKSVEVAFGEGKLDFPCL-ASCESSFSLQTLQAVLSPKLFSKIAQKKALEEIKSAGIEDLEVCPFCDFA-TIPAEGYTIFTCLNPECMKESCRMCKEPSH 819
BLAST of EMLSAG00000000189 vs. Select Arthropod Genomes
Match: gb|KYB28776.1| (hypothetical protein TcasGA2_TC032478 [Tribolium castaneum]) HSP 1 Score: 59.6918 bits (143), Expect = 1.267e-9 Identity = 36/133 (27.07%), Postives = 65/133 (48.87%), Query Frame = 0 Query: 32 GVQVRCLICW-EDLYMEDVISCDGDHPVCRSCLTEGIKNQLADGLDNYICLNYGCEIPYQISDLETVMDHKMITKYIQTLCSNEVKSCGEFGLYTCSECNYAVTIDKEGLDVIKCQYQYCKALTCIHCQLPAH 163 G+ C C+ E++ ++ +C + C+SC+ + ++ +G ++ CL CE + + L+ V+ K+ +K Q E+KS G L C C++A TI EG + C C +C C+ P+H Sbjct: 673 GLMQTCNCCYDEEVLPREIYTCQNNCEFCKSCIVKSVEVAFGEGKLDFPCL-ASCESSFSLQTLQAVLSPKLFSKIAQKKALEEIKSAGIEDLEVCPFCDFA-TIPAEGYTIFTCLNPECMKESCRMCKEPSH 803
BLAST of EMLSAG00000000189 vs. Select Arthropod Genomes
Match: gb|EFA00238.1| (hypothetical protein TcasGA2_TC003066 [Tribolium castaneum]) HSP 1 Score: 58.5362 bits (140), Expect = 2.785e-9 Identity = 44/160 (27.50%), Postives = 77/160 (48.12%), Query Frame = 0 Query: 5 KDEFELTSLLKSYPGKYMEGLIDKILQGVQVRCLICW-EDLYMEDVISCDGDHPVCRSCLTEGIKNQLADGLDNYICLNYGCEIPYQISDLETVMDHKMITKYIQTLCSNEVKSCGEFGLYTCSECNYAVTIDKEGLDVIKCQYQYCKALTCIHCQLPAH 163 K E + LK +Y + L + G+ CL C+ E+L E+ + CD + C++C+ G ++ + +G + CL C + S L+ V++ K+ + Q E+K+ GL +C C+Y V + +EG + KC C +C C+ AH Sbjct: 316 KHEKSIRQYLKLQNDRYRKALDEARKYGLLQTCLCCFDEELIPEECLFCDKNCTFCKNCVKLGAEHVIGEGGTKFPCL-ADCPSEFNYSVLKMVLNDKVFKRLCQRKQIEEIKNANVDGLESCPFCDY-VMVPEEGDKIFKCGNIECMKESCRECRHVAH 473
BLAST of EMLSAG00000000189 vs. Select Arthropod Genomes
Match: EEB18254.1 (E3 ubiquitin ligase triad3, putative [Pediculus humanus corporis]) HSP 1 Score: 56.6102 bits (135), Expect = 1.263e-8 Identity = 38/133 (28.57%), Postives = 66/133 (49.62%), Query Frame = 0 Query: 32 GVQVRCLICWE-DLYMEDVISCDGDHPVCRSCLTEGIKNQLADGLDNYICLNYGCEIPYQISDLETVMDHKMITKYIQTLCSNEVKSCGEFGLYTCSECNYAVTIDKEGLDVIKCQYQYCKALTCIHCQLPAH 163 G + C C++ ++ +ED I C DH C+ C+ + ++ ++ +G + CL CE + ++ L+ V+ ++ +K +Q E+KS G L C CNYA + E V+ C C +C CQ H Sbjct: 600 GTLLECQCCFDTEVMVEDTIYCPKDHSFCKDCVIKYVEVEMGNGKCQFKCL-ANCEENFTLAYLQKVLKPELFSKIVQANQMEEIKSAGIEDLVQCPFCNYATILPPEE-KVLTCLNPECLKESCRLCQELNH 730
BLAST of EMLSAG00000000189 vs. Select Arthropod Genomes
Match: gb|EFA00239.2| (hypothetical protein TcasGA2_TC003067 [Tribolium castaneum]) HSP 1 Score: 51.9878 bits (123), Expect = 4.470e-7 Identity = 44/160 (27.50%), Postives = 69/160 (43.12%), Query Frame = 0 Query: 5 KDEFELTSLLKSYPGKYMEGLIDKILQGVQVRCLICWED-LYMEDVISCDGDHPVCRSCLTEGIKNQLADGLDNYICLNYGCEIPYQISDLETVMDHKMITKYIQTLCSNEVKSCGEFGLYTCSECNYAVTIDKEGLDVIKCQYQYCKALTCIHCQLPAH 163 K E ++ +LK KY L QG+ C C++D L E+ C C+ C+ G +N + + CL C+ + S L V+D K+ E+++ GL TC C++ + D EG + KC C A TC C+ +H Sbjct: 294 KYEKQIRQMLKQQDDKYRLALEAAREQGLLQTCACCFDDNLIPEECYFCIKGCIFCKDCVRSGAENVIGKEETRFPCL-ADCDSEFDYSTLHMVLDRKVFQGVWHRKQIEEIRNANIDGLETCPFCDFCMIPD-EGDKIFKCANIECMAETCRLCRHRSH 451
BLAST of EMLSAG00000000189 vs. nr
Match: gi|1023207972|gb|KZT05150.1| (hypothetical protein LAESUDRAFT_727400 [Laetiporus sulphureus 93-53]) HSP 1 Score: 65.855 bits (159), Expect = 4.229e-9 Identity = 35/130 (26.92%), Postives = 61/130 (46.92%), Query Frame = 0 Query: 35 VRCLICWEDLYMEDVISCDGDHPVCRSCLTEGIKNQLADGLDNYICLNY-GCEIPYQISDLETVMDHKMITKYIQTLCSNEVKSCGEFGLYTCSECNYAVTIDKEGLDVIKCQYQYCKALTCIHCQLPAH 163 + C C+ E +I C H C C+T +L N +C++ GC++ + S+L + K+++ Y + E+++ G L C C Y I+ E + +CQ + C A+TC C+ P H Sbjct: 347 IECACCFSVYPFEKMIQCPEAHLFCMDCMTSYASTKLGTHDANIVCIDQTGCKLAFPESELRRFLSPKLLSLYERVKQQKEIEAAGLENLEECPHCEYKCVIENEQEKLFRCQNEDCMAITCRQCKKPDH 476
BLAST of EMLSAG00000000189 vs. nr
Match: gi|1071050292|ref|XP_018276149.1| (hypothetical protein CC85DRAFT_183013 [Cutaneotrichosporon oleaginosus] >gi|831330052|gb|KLT39658.1| hypothetical protein CC85DRAFT_183013 [Cutaneotrichosporon oleaginosus]) HSP 1 Score: 65.855 bits (159), Expect = 4.335e-9 Identity = 38/161 (23.60%), Postives = 73/161 (45.34%), Query Frame = 0 Query: 4 EKDEFELTSLLKSYPGKYMEGLIDKILQGVQVRCLICWEDLYMEDVISCDGDHPVCRSCLTEGIKNQLADGLDNYICLNYG-CEIPYQISDLETVMDHKMITKYIQTLCSNEVKSCGEFGLYTCSECNYAVTIDKEGLDVIKCQYQYCKALTCIHCQLPAH 163 E+ E T+ + E I G C C++ +ED+++C H CR+C+ +N+L + + IC++ C+ P+ + L V + ++ Y + +++ GL +C C +A+ ID + +C C +TC +C+ P H Sbjct: 322 EQRELANTAAKRKQEADREERRQRAITAGQSRECGCCFDQEALEDLVACPEGHMFCRTCVASLAENKLGEHQIDIICMDMSQCDAPFSDAVLAAVCGEQTMSLYHRLRQMKDLEMAAIDGLESCPHCPFAMVIDNPDEKLFRCHNPACSKVTCRNCKRPDH 482
BLAST of EMLSAG00000000189 vs. nr
Match: gi|1101793820|ref|XP_018992379.1| (hypothetical protein, variant 8 [Cryptococcus amylolentus CBS 6039] >gi|1101793822|ref|XP_018992380.1| hypothetical protein, variant 9 [Cryptococcus amylolentus CBS 6039] >gi|1101793824|ref|XP_018992381.1| hypothetical protein, variant 10 [Cryptococcus amylolentus CBS 6039] >gi|1101793826|ref|XP_018992382.1| hypothetical protein, variant 11 [Cryptococcus amylolentus CBS 6039] >gi|1101793828|ref|XP_018992383.1| hypothetical protein, variant 12 [Cryptococcus amylolentus CBS 6039] >gi|1062130258|gb|ODN77005.1| hypothetical protein, variant 8 [Cryptococcus amylolentus CBS 6039] >gi|1062130259|gb|ODN77006.1| hypothetical protein, variant 9 [Cryptococcus amylolentus CBS 6039] >gi|1062130260|gb|ODN77007.1| hypothetical protein, variant 10 [Cryptococcus amylolentus CBS 6039] >gi|1062130261|gb|ODN77008.1| hypothetical protein, variant 11 [Cryptococcus amylolentus CBS 6039] >gi|1062130262|gb|ODN77009.1| hypothetical protein, variant 12 [Cryptococcus amylolentus CBS 6039] >gi|1062158269|gb|ODO04874.1| hypothetical protein I350_05484 [Cryptococcus amylolentus CBS 6273]) HSP 1 Score: 65.855 bits (159), Expect = 5.062e-9 Identity = 36/141 (25.53%), Postives = 67/141 (47.52%), Query Frame = 0 Query: 25 LIDK-ILQGVQVRCLICWEDLYMEDVISCDGDHPVCRSCLTEGIKNQLADGLDNYICLNYG-CEIPYQISDLETVMDHKMITKYIQTLCSNEVKSCGEFGLYTCSECNYAVTIDKEGLDVIKCQYQYCKALTCIHCQLPAH 163 LID + +G + C C+ D E++ C+ H C+ C + +L D C++ C+ P+ S+L + +K ++ Y + S E++ GL +C C+++ ID + +C + C +TC C+ P H Sbjct: 412 LIDAAVAKGEGIECGCCFGDDIPENMFQCENGHLFCKDCTIRNAETKLGDQSTTITCMDTSDCKCPFPESELRRSLSNKSLSLYHRLKQSKELELAAIEGLESCPSCDFSAIIDNPHEKLFRCINESCGHVTCRKCRRPEH 552
BLAST of EMLSAG00000000189 vs. nr
Match: gi|585657217|ref|XP_006815806.1| (PREDICTED: uncharacterized protein LOC102801442 [Saccoglossus kowalevskii]) HSP 1 Score: 65.855 bits (159), Expect = 5.662e-9 Identity = 35/130 (26.92%), Postives = 63/130 (48.46%), Query Frame = 0 Query: 35 VRCLICWED-LYMEDVISCDGDHPVCRSCLTEGIKNQLADGLDNYICLNYGCEIPYQISDLETVMDHKMITKYIQTLCSNEVKSCGEFGLYTCSECNYAVTIDKEGLDVIKCQYQYCKALTCIHCQLPAH 163 + C C+ED L ED++SC H CR+C+ + + G ++ CL+ C+ + ++ L+ V+ +++ ++ + E+K L TC C +A +D V KCQ C +C C+ H Sbjct: 693 LECGCCYEDELLSEDMVSCPNAHLFCRNCVKRSSQEIIGQGRIDFPCLSPECDSMFTVTVLQKVLLPSVMSNLLKRIQEEEIKKADIPNLETCPFCTFATIMDNPDDKVFKCQNTECLKESCRLCKELNH 822
BLAST of EMLSAG00000000189 vs. nr
Match: gi|1044615650|gb|OCB90210.1| (hypothetical protein A7U60_g2581 [Sanghuangporus baumii]) HSP 1 Score: 65.4698 bits (158), Expect = 6.335e-9 Identity = 36/142 (25.35%), Postives = 69/142 (48.59%), Query Frame = 0 Query: 23 EGLIDKILQGVQVRCLICWEDLYMEDVISCDGDHPVCRSCLTEGIKNQLADGLDNYICLNY-GCEIPYQISDLETVMDHKMITKYIQTLCSNEVKSCGEFGLYTCSECNYAVTIDKEGLDVIKCQYQYCKALTCIHCQLPAH 163 EG D I G + C C++ + ++ C H C+ C+T +NQL N +C++ GC++ + ++L+ + K++ Y + + E+++ GL C C Y ID + +C+ + C A++C C+ H Sbjct: 308 EGESDGIC-GDGIECGCCFDTYDFDKMVQCPDAHLFCKGCITSYAENQLGQHNPNIVCMDQSGCKLAFTDAELKRFLPAKLLELYERVKQAKEIEAAELDGLEECPFCEYKAVIDNPDEKLFRCEREDCGAVSCRACKKADH 448 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000189 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 7
BLAST of EMLSAG00000000189 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
Pagesback to top
BLAST of EMLSAG00000000189 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 5
BLAST of EMLSAG00000000189 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000000189 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 5
BLAST of EMLSAG00000000189 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
Pagesback to top
BLAST of EMLSAG00000000189 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1029:145437..146295- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000189-682955 ID=EMLSAG00000000189-682955|Name=EMLSAG00000000189|organism=Lepeophtheirus salmonis|type=gene|length=859bp|location=Sequence derived from alignment at LSalAtl2s1029:145437..146295- (Lepeophtheirus salmonis)back to top Add to Basket
|