EMLSAG00000000242, EMLSAG00000000242-683008 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000242 vs. C. finmarchicus
Match: gi|592898054|gb|GAXK01060321.1| (TSA: Calanus finmarchicus comp4353355_c0_seq1 transcribed RNA sequence) HSP 1 Score: 29.6462 bits (65), Expect = 6.154e-1 Identity = 12/29 (41.38%), Postives = 18/29 (62.07%), Query Frame = 0 Query: 33 SFYYFQQMIIIFKSPKALYCLDVAECQSS 61 S + F +I F SP+A+YC D+ +SS Sbjct: 691 SGFAFPDHLIRFDSPRAMYCEDLESGRSS 777
BLAST of EMLSAG00000000242 vs. C. finmarchicus
Match: gi|592837229|gb|GAXK01120315.1| (TSA: Calanus finmarchicus comp986912_c0_seq3 transcribed RNA sequence) HSP 1 Score: 26.9498 bits (58), Expect = 5.508e+0 Identity = 9/24 (37.50%), Postives = 16/24 (66.67%), Query Frame = 0 Query: 42 IIFKSPKALYCLDVAECQSSSLPY 65 + FK ++L+C +V +C S +PY Sbjct: 5 VFFKKNESLHCENVDDCLGSYMPY 76
BLAST of EMLSAG00000000242 vs. L. salmonis peptides
Match: EMLSAP00000000242 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1033:32348:36646:1 gene:EMLSAG00000000242 transcript:EMLSAT00000000242 description:"snap-LSalAtl2s1033-processed-gene-0.45") HSP 1 Score: 136.732 bits (343), Expect = 2.017e-43 Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0 Query: 1 MSFRQTRTHMIIFVTNFFNSLTLQTLIIYNIRSFYYFQQMIIIFKSPKALYCLDVAECQSSSLPYTT 67 MSFRQTRTHMIIFVTNFFNSLTLQTLIIYNIRSFYYFQQMIIIFKSPKALYCLDVAECQSSSLPYTT Sbjct: 1 MSFRQTRTHMIIFVTNFFNSLTLQTLIIYNIRSFYYFQQMIIIFKSPKALYCLDVAECQSSSLPYTT 67 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000242 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000000242 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 2
BLAST of EMLSAG00000000242 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000000242 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000000242 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000000242 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000000242 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1033:32348..36646+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000242-683008 ID=EMLSAG00000000242-683008|Name=EMLSAG00000000242|organism=Lepeophtheirus salmonis|type=gene|length=4299bp|location=Sequence derived from alignment at LSalAtl2s1033:32348..36646+ (Lepeophtheirus salmonis)back to top Add to Basket
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