EMLSAG00000000260, EMLSAG00000000260-683026 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000260 vs. GO
Match: - (symbol:CG5059 species:7227 "Drosophila melanogaster" [GO:0043065 "positive regulation of apoptotic process" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] [GO:0005740 "mitochondrial envelope" evidence=IEA] InterPro:IPR010548 Pfam:PF06553 GO:GO:0016021 EMBL:AE014296 GO:GO:0043065 GO:GO:0005740 KO:K15464 UniGene:Dm.13642 GeneID:40278 KEGG:dme:Dmel_CG5059 FlyBase:FBgn0037007 ChiTaRS:CG5059 GenomeRNAi:40278 NextBio:817939 EMBL:AY119143 RefSeq:NP_649239.1 SMR:Q9VPD6 EnsemblMetazoa:FBtr0078216 UCSC:CG5059-RA InParanoid:Q9VPD6 OMA:LLGESWI Uniprot:Q9VPD6) HSP 1 Score: 76.2554 bits (186), Expect = 6.056e-16 Identity = 50/110 (45.45%), Postives = 72/110 (65.45%), Query Frame = 0 Query: 1 MTTTPP--DVPLTDSWVDLSGPFNVS--TSPLRVTPIPFGGEQDYLRMLREAQRESSRSSNKVSPISSAFMSLSSTCRNTPIQSPKSRPNTPNPDMTFYPDD-LDDVYVN 105 M+TTP + L +SW++LS ++ SP R+TP+PF ++YLR+LREAQRES++SS V SL+S+ R+TP SPKS PN+P ++ PDD L +VY+N Sbjct: 1 MSTTPKSSEDLLGESWIELSTTAAMAGIKSPDRITPLPFNNGEEYLRLLREAQRESNQSSRVV--------SLASSRRDTPRDSPKSPPNSPQSELC--PDDELRNVYIN 100
BLAST of EMLSAG00000000260 vs. C. finmarchicus
Match: gi|592759013|gb|GAXK01195400.1| (TSA: Calanus finmarchicus comp453458_c1_seq6 transcribed RNA sequence) HSP 1 Score: 56.9954 bits (136), Expect = 2.966e-9 Identity = 53/112 (47.32%), Postives = 76/112 (67.86%), Query Frame = 0 Query: 1 MTTTPPDVPLTDSWVDLSGPFNVSTSPLRVTPIPFGGEQDYLRMLREAQRE-SSRSSNKVSPISSAFMSLSSTCRNTPIQSPKSRPNTPNPDMTFYPD-----DLDDVYVNR 106 MT TPP + WVD++ P V + + +P+PF +QDY++ML+EAQRE S+RSS +VSP+SSA MS+SST +NTP SPKS PN+PN ++ ++ D V++NR Sbjct: 483 MTDTPPGGQSS--WVDVARP-EVHSPHIPASPVPFPLDQDYIKMLKEAQRESSARSSARVSPLSSAMMSVSSTSKNTPSSSPKSPPNSPNVELAYFNDLKEQLKAQGVFINR 809
BLAST of EMLSAG00000000260 vs. C. finmarchicus
Match: gi|592759014|gb|GAXK01195399.1| (TSA: Calanus finmarchicus comp453458_c1_seq5 transcribed RNA sequence) HSP 1 Score: 56.9954 bits (136), Expect = 3.006e-9 Identity = 53/112 (47.32%), Postives = 76/112 (67.86%), Query Frame = 0 Query: 1 MTTTPPDVPLTDSWVDLSGPFNVSTSPLRVTPIPFGGEQDYLRMLREAQRE-SSRSSNKVSPISSAFMSLSSTCRNTPIQSPKSRPNTPNPDMTFYPD-----DLDDVYVNR 106 MT TPP + WVD++ P V + + +P+PF +QDY++ML+EAQRE S+RSS +VSP+SSA MS+SST +NTP SPKS PN+PN ++ ++ D V++NR Sbjct: 492 MTDTPPGGQSS--WVDVARP-EVHSPHIPASPVPFPLDQDYIKMLKEAQRESSARSSARVSPLSSAMMSVSSTSKNTPSSSPKSPPNSPNVELAYFNDLKEQLKAQGVFINR 818
BLAST of EMLSAG00000000260 vs. C. finmarchicus
Match: gi|592759015|gb|GAXK01195398.1| (TSA: Calanus finmarchicus comp453458_c1_seq4 transcribed RNA sequence) HSP 1 Score: 56.9954 bits (136), Expect = 3.019e-9 Identity = 53/112 (47.32%), Postives = 76/112 (67.86%), Query Frame = 0 Query: 1 MTTTPPDVPLTDSWVDLSGPFNVSTSPLRVTPIPFGGEQDYLRMLREAQRE-SSRSSNKVSPISSAFMSLSSTCRNTPIQSPKSRPNTPNPDMTFYPD-----DLDDVYVNR 106 MT TPP + WVD++ P V + + +P+PF +QDY++ML+EAQRE S+RSS +VSP+SSA MS+SST +NTP SPKS PN+PN ++ ++ D V++NR Sbjct: 483 MTDTPPGGQSS--WVDVARP-EVHSPHIPASPVPFPLDQDYIKMLKEAQRESSARSSARVSPLSSAMMSVSSTSKNTPSSSPKSPPNSPNVELAYFNDLKEQLKAQGVFINR 809
BLAST of EMLSAG00000000260 vs. C. finmarchicus
Match: gi|592759017|gb|GAXK01195396.1| (TSA: Calanus finmarchicus comp453458_c1_seq2 transcribed RNA sequence) HSP 1 Score: 56.9954 bits (136), Expect = 3.057e-9 Identity = 53/112 (47.32%), Postives = 76/112 (67.86%), Query Frame = 0 Query: 1 MTTTPPDVPLTDSWVDLSGPFNVSTSPLRVTPIPFGGEQDYLRMLREAQRE-SSRSSNKVSPISSAFMSLSSTCRNTPIQSPKSRPNTPNPDMTFYPD-----DLDDVYVNR 106 MT TPP + WVD++ P V + + +P+PF +QDY++ML+EAQRE S+RSS +VSP+SSA MS+SST +NTP SPKS PN+PN ++ ++ D V++NR Sbjct: 492 MTDTPPGGQSS--WVDVARP-EVHSPHIPASPVPFPLDQDYIKMLKEAQRESSARSSARVSPLSSAMMSVSSTSKNTPSSSPKSPPNSPNVELAYFNDLKEQLKAQGVFINR 818
BLAST of EMLSAG00000000260 vs. C. finmarchicus
Match: gi|592904702|gb|GAXK01053673.1| (TSA: Calanus finmarchicus comp259764_c1_seq1 transcribed RNA sequence) HSP 1 Score: 33.8834 bits (76), Expect = 1.036e-1 Identity = 22/55 (40.00%), Postives = 30/55 (54.55%), Query Frame = 0 Query: 1 MTTTPPDVPLTDSWVDLSGPFNVSTSPL-------RVTPIPFGGEQDYLRMLREA 48 MT TPP SWVDL+ F + S R TP+P +Q+Y++ML+EA Sbjct: 206 MTDTPPGG--QSSWVDLTREFPSAYSSPPVPSSPSRTTPVPCTLDQEYIKMLKEA 364
BLAST of EMLSAG00000000260 vs. C. finmarchicus
Match: gi|592801080|gb|GAXK01153488.1| (TSA: Calanus finmarchicus comp636897_c0_seq1 transcribed RNA sequence) HSP 1 Score: 31.5722 bits (70), Expect = 6.160e-1 Identity = 13/43 (30.23%), Postives = 25/43 (58.14%), Query Frame = 0 Query: 52 SSRSSNKVSPISSAFMSLSSTCRNTPIQSPKSRPNTPNPDMTF 94 +S S N ++P+ +A+ ++SSTC+ + S PN+ P + Sbjct: 152 ASNSGNTLTPLLAAYFTMSSTCQGL*VSSGLYAPNSAKPGREY 280
BLAST of EMLSAG00000000260 vs. C. finmarchicus
Match: gi|592754771|gb|GAXK01199642.1| (TSA: Calanus finmarchicus comp181966_c2_seq2 transcribed RNA sequence) HSP 1 Score: 30.0314 bits (66), Expect = 4.991e+0 Identity = 16/41 (39.02%), Postives = 20/41 (48.78%), Query Frame = 0 Query: 90 PDMTFYPDDLDDVYVNRIKNEDSSKSLNNNIASDLIWDWSS 130 P T PD D +RI ++S S NNN SD + D S Sbjct: 950 PTTTMEPDSSTDDQESRISGKESHVSYNNNTGSDALKDQGS 1072
BLAST of EMLSAG00000000260 vs. C. finmarchicus
Match: gi|592754772|gb|GAXK01199641.1| (TSA: Calanus finmarchicus comp181966_c2_seq1 transcribed RNA sequence) HSP 1 Score: 30.0314 bits (66), Expect = 5.039e+0 Identity = 16/41 (39.02%), Postives = 20/41 (48.78%), Query Frame = 0 Query: 90 PDMTFYPDDLDDVYVNRIKNEDSSKSLNNNIASDLIWDWSS 130 P T PD D +RI ++S S NNN SD + D S Sbjct: 950 PTTTMEPDSSTDDQESRISGKESHVSYNNNTGSDALKDQGS 1072
BLAST of EMLSAG00000000260 vs. C. finmarchicus
Match: gi|592878692|gb|GAXK01079209.1| (TSA: Calanus finmarchicus comp267685_c0_seq1 transcribed RNA sequence) HSP 1 Score: 29.261 bits (64), Expect = 9.519e+0 Identity = 29/95 (30.53%), Postives = 44/95 (46.32%), Query Frame = 0 Query: 13 SWVDLSGPFNVSTSPLRVTPIPFGGEQDYLRMLREAQRESS----------RSSNKVSPISSAFMSLSSTCRNTPIQSPKSRPNTPNPDMTFYPD 97 S+ D P ++T + P FG E +Y+ L++ +RES R S VSP S LSS S +SR N+P+P ++ P+ Sbjct: 540 SFTDTYTPSVITT----IEPRAFGAEAEYISRLKQ-RRESCQNDGQDLDIQRHSVIVSP--SQIHHLSS--------SDQSRDNSPSPTLSLLPN 779
BLAST of EMLSAG00000000260 vs. L. salmonis peptides
Match: EMLSAP00000000260 (pep:novel supercontig:LSalAtl2s:LSalAtl2s103:1017149:1018491:-1 gene:EMLSAG00000000260 transcript:EMLSAT00000000260 description:"maker-LSalAtl2s103-augustus-gene-10.19") HSP 1 Score: 340.887 bits (873), Expect = 1.112e-120 Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0 Query: 1 MTTTPPDVPLTDSWVDLSGPFNVSTSPLRVTPIPFGGEQDYLRMLREAQRESSRSSNKVSPISSAFMSLSSTCRNTPIQSPKSRPNTPNPDMTFYPDDLDDVYVNRIKNEDSSKSLNNNIASDLIWDWSSRSKEWKTVHGNGSSGRSRKSSSSRFGFANVVEVMIFLNK 169 MTTTPPDVPLTDSWVDLSGPFNVSTSPLRVTPIPFGGEQDYLRMLREAQRESSRSSNKVSPISSAFMSLSSTCRNTPIQSPKSRPNTPNPDMTFYPDDLDDVYVNRIKNEDSSKSLNNNIASDLIWDWSSRSKEWKTVHGNGSSGRSRKSSSSRFGFANVVEVMIFLNK Sbjct: 1 MTTTPPDVPLTDSWVDLSGPFNVSTSPLRVTPIPFGGEQDYLRMLREAQRESSRSSNKVSPISSAFMSLSSTCRNTPIQSPKSRPNTPNPDMTFYPDDLDDVYVNRIKNEDSSKSLNNNIASDLIWDWSSRSKEWKTVHGNGSSGRSRKSSSSRFGFANVVEVMIFLNK 169
BLAST of EMLSAG00000000260 vs. Select Arthropod Genomes
Match: EFX87626.1 (hypothetical protein DAPPUDRAFT_96855 [Daphnia pulex]) HSP 1 Score: 59.6918 bits (143), Expect = 1.304e-10 Identity = 58/138 (42.03%), Postives = 83/138 (60.14%), Query Frame = 0 Query: 10 LTDSWVDLSGPFNVSTSPLRVTPIPFGGEQDYLRMLREAQRESSRSSNKVSPISSAFMSLSSTCRNTPIQSPKSRPNTPNPDMTFYPDDLDDVYVNRIKNEDSSKSLNNNIASDLIWDWSSR-----SKEWKTVHGNG 142 L +SWV++S +S + R T +P G + DYLR+LREAQR+S++SS A +SL+ST +N+P SPKS PN+PN + ++L Y+N E + SL N+ +D +WDWSSR KEWK +H G Sbjct: 14 LGESWVEVSEQ-PISPTAERPTHLPHGPD-DYLRLLREAQRDSNQSS--------ALVSLASTRKNSPHSSPKSPPNSPNTEPAGEGEELKGFYINYCTKEGT--SLEND--TDWVWDWSSRPEQQAPKEWKFMHPEG 137
BLAST of EMLSAG00000000260 vs. nr
Match: gi|1069720760|ref|XP_018316502.1| (PREDICTED: BCL2/adenovirus E1B 19 kDa protein-interacting protein 3 [Trachymyrmex zeteki]) HSP 1 Score: 87.0409 bits (214), Expect = 2.483e-18 Identity = 68/176 (38.64%), Postives = 101/176 (57.39%), Query Frame = 0 Query: 7 DVPLTDSWVDLSGPFNVSTSPL--RVTPIPFG--GEQDYLRMLREAQRESSRSSNKVSPISSAFMSLSSTCRNTPIQSPKSRPNTPNPDMTFYPDDLDDVYVNRIKNEDSSKSLNNNIASDLIWDWSSR-----SKEWKTVHGNGSSGRSRKSSSSRFG----FA-NVVEVMIFLN 168 D L++SWV+L V PL R+TP PF GE++YLR+LREAQR+S+ SS K SL+S+ R+TP SPKS PN+PN +++ D+L VY+N N++ + L N +D I++WSSR K+WK H GS ++ +++ G F+ V+ + F N Sbjct: 10 DEQLSESWVEL-----VPDPPLASRITPTPFSITGEREYLRLLREAQRDSTHSSAK--------HSLASSRRDTPRDSPKSPPNSPNTELS-TEDELKGVYINYGCNKE-GELLEKN--TDWIYEWSSRPDQAPPKDWKFKHPLGSKRKTYSIRTAKVGKNGLFSKEVIYTLFFTN 168
BLAST of EMLSAG00000000260 vs. nr
Match: gi|939243052|ref|XP_014240822.1| (PREDICTED: BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like isoform X3 [Cimex lectularius]) HSP 1 Score: 86.6557 bits (213), Expect = 2.676e-18 Identity = 62/147 (42.18%), Postives = 85/147 (57.82%), Query Frame = 0 Query: 1 MTTTPPDVP---LTDSWVDLSGPFNVSTSPLRVTPIPFGGEQDYLRMLREAQRESSRSSNKVSPISSAFMSLSSTCRNTPIQSPKSRPNTPNPDMTFYPDDLDDVYVNRIKNEDSSKSLNNNIASDLIWDWSSR-----SKEWKTVH 139 MTTTP +P L +SWV++ GP SP R TP+ F ++YLR+LREAQRES+ SS +V SL+S+ + SPKS PN+PN +++ ++L VY+N E+ + N SD IWDWSSR K+WK H Sbjct: 1 MTTTPTSIPEETLGESWVEV-GP-----SPERTTPLSFAPTEEYLRLLREAQRESNHSSARV--------SLASSKKG----SPKSPPNSPNTELSM-DEELKGVYINYNGKEEEWVGVEKN--SDWIWDWSSRPDQFPPKDWKLRH 126
BLAST of EMLSAG00000000260 vs. nr
Match: gi|340725858|ref|XP_003401282.1| (PREDICTED: BCL2/adenovirus E1B 19 kDa protein-interacting protein 3 [Bombus terrestris]) HSP 1 Score: 86.6557 bits (213), Expect = 3.341e-18 Identity = 60/142 (42.25%), Postives = 85/142 (59.86%), Query Frame = 0 Query: 7 DVPLTDSWVDLSGPFNVSTSPLRVTPIPFG-GEQDYLRMLREAQRESSRSSNKVSPISSAFMSLSSTCRNTPIQSPKSRPNTPNPDMTFYPDDLDDVYVNRIKNEDSSKSLNNNIASDLIWDWSSR-----SKEWKTVHGNG 142 D L +SWV+L+ P RVTP+PF G ++YLR+LREAQR+S SS A SL+S+ R TP SPKS PN+PN +++ D+L VY+N N+++++ L N +D I++WSSR K+WK H G Sbjct: 10 DEILGESWVELN------PVPDRVTPLPFSSGGEEYLRLLREAQRDSLPSS--------ARHSLASSRRGTPRDSPKSPPNSPNTELS-TEDELKGVYINYCCNKEAAELLEKN--TDWIYEWSSRPDQAPPKDWKFKHPQG 134
BLAST of EMLSAG00000000260 vs. nr
Match: gi|939629280|ref|XP_014273916.1| (PREDICTED: BCL2/adenovirus E1B 19 kDa protein-interacting protein 3 isoform X1 [Halyomorpha halys]) HSP 1 Score: 86.2705 bits (212), Expect = 3.900e-18 Identity = 68/174 (39.08%), Postives = 98/174 (56.32%), Query Frame = 0 Query: 1 MTTTPPDVP---LTDSWVDLSGPFNVSTSPLRVTPIPFGGEQDYLRMLREAQRESSRSSNKVSPISSAFMSLSSTCRNTPIQSPKSRPNTPNPDMTFYPDDLDDVYVNRIKNEDSSKSLNNNIASDLIWDWSSR-----SKEWKTVHGNGSSGRSRKSSSSRFGFANVVEVMIF 166 MTTTP +P L +SWV+ V SP R TP+PF ++YLR+L+EAQRES++ SSA SL+S+ + + + SPKS PN+PN +++ ++L VY+N + + ++ N +D IWDWSSR K+WK H SRK S R A V +V +F Sbjct: 1 MTTTPTSIPEDSLGESWVE------VGRSPERTTPLPFPAAEEYLRLLKEAQRESNQ--------SSARHSLASSVKGSFVFSPKSPPNSPNTELSV-EEELKGVYINY--SGKDVEWIDKN--TDWIWDWSSRPDQEPPKDWKFRHPA-----SRKMLSIR--TAKVGKVALF 148
BLAST of EMLSAG00000000260 vs. nr
Match: gi|795055748|ref|XP_011871621.1| (PREDICTED: BCL2/adenovirus E1B 19 kDa protein-interacting protein 3 [Vollenhovia emeryi]) HSP 1 Score: 86.2705 bits (212), Expect = 5.172e-18 Identity = 67/176 (38.07%), Postives = 99/176 (56.25%), Query Frame = 0 Query: 7 DVPLTDSWVDLSGPFNVSTSPL--RVTPIPFG--GEQDYLRMLREAQRESSRSSNKVSPISSAFMSLSSTCRNTPIQSPKSRPNTPNPDMTFYPDDLDDVYVNRIKNEDSSKSLNNNIASDLIWDWSSR-----SKEWKTVHGNGSSGRSRKSSSSRFG----FA-NVVEVMIFLN 168 D L++SWV+L V PL R+TP PF GE++YLR+LREAQR+S+ SSA SL+S+ R+TP SPKS PN+PN +++ D+L VY+N N++ N +D I++WSSR K+WK H GS ++ +++ G F+ V+ + F N Sbjct: 10 DEQLSESWVEL-----VPDPPLAARITPTPFSVTGEREYLRLLREAQRDSTH--------SSARHSLASSRRDTPRDSPKSPPNSPNTELS-TEDELKGVYINYGCNKEGELLEKN---TDWIYEWSSRPDQAPPKDWKFKHPLGSKRKTYSIRTAKVGKNGLFSKEVIYTLFFTN 168
BLAST of EMLSAG00000000260 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold297_size217559-snap-gene-0.32 (protein:Tk11584 transcript:maker-scaffold297_size217559-snap-gene-0.32-mRNA-1 annotation:"bcl2 adenovirus e1b 19 kda protein-interacting") HSP 1 Score: 150.599 bits (379), Expect = 2.259e-46 Identity = 90/141 (63.83%), Postives = 108/141 (76.60%), Query Frame = 0 Query: 1 MTTTPPDVPLTDSWVDLSGPFNVSTSPLRVTPIPFGGEQDYLRMLREAQRESSRSSNKVSPISSAFMSLSSTCRNTPIQSPKSRPNTPNPDMTFYPDDLDDVYVNRIKNEDSSKSLNNNI-ASDLIWDWSSR----SKEWK 136 MT+TPPD TDSWVDLSG F+ S +P RVTPIPFGGE DYLRMLREAQRES ++SNKVSPISSA MSLSST RNTP SPKS PN+PNP++ + +DL VYVNR+ + S + + AS++IWDW+SR S+EWK Sbjct: 25 MTSTPPDNNFTDSWVDLSGQFSQSHTPNRVTPIPFGGEHDYLRMLREAQRESKQNSNKVSPISSALMSLSSTTRNTPSASPKSPPNSPNPELAAFAEDLKGVYVNRLSDSSSPTGVGQPVTASEIIWDWTSRPNVQSREWK 165 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000260 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 1
BLAST of EMLSAG00000000260 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 19
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BLAST of EMLSAG00000000260 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000000260 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000000260 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 11
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BLAST of EMLSAG00000000260 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
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BLAST of EMLSAG00000000260 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s103:1017149..1018491- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000260-683026 ID=EMLSAG00000000260-683026|Name=EMLSAG00000000260|organism=Lepeophtheirus salmonis|type=gene|length=1343bp|location=Sequence derived from alignment at LSalAtl2s103:1017149..1018491- (Lepeophtheirus salmonis)back to top Add to Basket
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