EMLSAG00000000268, EMLSAG00000000268-683034 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000268 vs. C. finmarchicus
Match: gi|592849526|gb|GAXK01108018.1| (TSA: Calanus finmarchicus comp1405084_c0_seq1 transcribed RNA sequence) HSP 1 Score: 33.4982 bits (75), Expect = 6.818e-1 Identity = 23/83 (27.71%), Postives = 38/83 (45.78%), Query Frame = 0 Query: 165 EPECRKKLVCEVYSRPDDVLGEGYLGKTIKK--GMEYLPYIQERYNVAAEILDGKKEAEEHRVCETKKASC-DHLERVLNGMM 244 P C +K+VC + +DV G+ L K K +L + +Y + G A H+ C + K+ C DHL+R + + Sbjct: 391 RPNCHRKVVCH*AADQEDVAGQDTLKKIRPKR*NHFFLVFKIPKYGCKSCCS*GCTNARNHQKCFSAKSICNDHLDRAEDNLC 639
BLAST of EMLSAG00000000268 vs. C. finmarchicus
Match: gi|592892699|gb|GAXK01065676.1| (TSA: Calanus finmarchicus comp4986_c0_seq1 transcribed RNA sequence) HSP 1 Score: 30.0314 bits (66), Expect = 9.502e+0 Identity = 24/94 (25.53%), Postives = 44/94 (46.81%), Query Frame = 0 Query: 145 IMGLIHLAYDIYNAADESLREPECRKKLVCEVYSRPDDVLGEGYLGKTIKKGMEYLPYIQ------------ERYNVAAEILDGKKEAEEHRVC 226 ++ I + ++Y D + EC+K+L+CEV + ++ G + K +K G + Y++ + Y A+E G+KE EE C Sbjct: 373 VIQWISMLQEVYEKFD--YNDLECQKRLICEVL-KEEEYFGN--VSKKMKSGFQLARYLEVLNMPDDFRELLDEYLDASERSVGQKECEEFFQC 639
BLAST of EMLSAG00000000268 vs. L. salmonis peptides
Match: EMLSAP00000000268 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1041:11018:12226:-1 gene:EMLSAG00000000268 transcript:EMLSAT00000000268 description:"maker-LSalAtl2s1041-augustus-gene-0.31") HSP 1 Score: 537.724 bits (1384), Expect = 0.000e+0 Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0 Query: 1 MEKNSLMFLSVVVLIGTLSPGISAIDHHQDKVNEEELGLEPRTFDLTLGGFNSTIAITGTLIIGSLLLFSAVLYALDVYATSRIDRMLVDSFGPEIFERFSHAYASQDTDDLLAGTYEDIYEGSSRRRRRQASEETKITKSESRIMGLIHLAYDIYNAADESLREPECRKKLVCEVYSRPDDVLGEGYLGKTIKKGMEYLPYIQERYNVAAEILDGKKEAEEHRVCETKKASCDHLERVLNGMMKENAFLNHKGHGEQVQN 261 MEKNSLMFLSVVVLIGTLSPGISAIDHHQDKVNEEELGLEPRTFDLTLGGFNSTIAITGTLIIGSLLLFSAVLYALDVYATSRIDRMLVDSFGPEIFERFSHAYASQDTDDLLAGTYEDIYEGSSRRRRRQASEETKITKSESRIMGLIHLAYDIYNAADESLREPECRKKLVCEVYSRPDDVLGEGYLGKTIKKGMEYLPYIQERYNVAAEILDGKKEAEEHRVCETKKASCDHLERVLNGMMKENAFLNHKGHGEQVQN Sbjct: 1 MEKNSLMFLSVVVLIGTLSPGISAIDHHQDKVNEEELGLEPRTFDLTLGGFNSTIAITGTLIIGSLLLFSAVLYALDVYATSRIDRMLVDSFGPEIFERFSHAYASQDTDDLLAGTYEDIYEGSSRRRRRQASEETKITKSESRIMGLIHLAYDIYNAADESLREPECRKKLVCEVYSRPDDVLGEGYLGKTIKKGMEYLPYIQERYNVAAEILDGKKEAEEHRVCETKKASCDHLERVLNGMMKENAFLNHKGHGEQVQN 261 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000268 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000000268 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 12
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BLAST of EMLSAG00000000268 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000000268 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000000268 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000000268 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000000268 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1041:11018..12226- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000268-683034 ID=EMLSAG00000000268-683034|Name=EMLSAG00000000268|organism=Lepeophtheirus salmonis|type=gene|length=1209bp|location=Sequence derived from alignment at LSalAtl2s1041:11018..12226- (Lepeophtheirus salmonis)back to top Add to Basket
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