EMLSAG00000000275, EMLSAG00000000275-683041 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000275 vs. GO
Match: - (symbol:prp19 "ubiquitin-protein ligase E4" species:4896 "Schizosaccharomyces pombe" [GO:0005681 "spliceosomal complex" evidence=NAS] [GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0005515 "protein binding" evidence=IPI] [GO:0045292 "mRNA cis splicing, via spliceosome" evidence=TAS] [GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000974 "Prp19 complex" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504 PomBase:SPAC29A4.08c GO:GO:0005829 EMBL:CU329670 GO:GO:0005635 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR019775 PROSITE:PS00678 GO:GO:0005681 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842 GO:GO:0000151 GO:GO:0045292 GO:GO:0000974 PROSITE:PS51698 EMBL:AF254351 PIR:T38481 RefSeq:NP_594874.1 ProteinModelPortal:O14011 BioGrid:278726 DIP:DIP-34861N IntAct:O14011 MINT:MINT-4669726 STRING:4896.SPAC29A4.08c-1 EnsemblFungi:SPAC29A4.08c.1 GeneID:2542256 KEGG:spo:SPAC29A4.08c eggNOG:NOG319177 KO:K10599 OMA:TKSTKSW OrthoDB:EOG7V76GC NextBio:20803321 PRO:PR:O14011 InterPro:IPR013915 Pfam:PF08606 Uniprot:O14011) HSP 1 Score: 135.961 bits (341), Expect = 1.435e-36 Identity = 71/141 (50.35%), Postives = 92/141 (65.25%), Query Frame = 0 Query: 5 ICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSA 145 CSIS E+P+ PVIS SG VY+KRLIE+V+ DPV+ ++E+L+ +K V+P+PPS TS+PA+L Q+EWD+V L F LR+ L +QELS ALY DAA RVI+RLTKE AREALA S+ Sbjct: 2 FCSISGETPKEPVISRVSGNVYEKRLIEQVIRETSK-DPVTQQECTLEDLVPVKVPDFVRPRPPSATSLPALLSLFQEEWDSVALEQFELRRNLTETKQELSTALYSLDAALRVISRLTKERDEAREALAKFSDNIGTVSS 141
BLAST of EMLSAG00000000275 vs. GO
Match: - (symbol:PFC0365w "PRP19-like protein, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0016363 "nuclear matrix" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR004226 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR019775 PROSITE:PS00678 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0016363 GO:GO:0005874 GO:GO:0007021 GO:GO:0000151 EMBL:AL844502 KO:K10599 InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV SUPFAM:SSF46988 PIR:T18432 RefSeq:XP_001351160.1 ProteinModelPortal:O77325 SMR:O77325 IntAct:O77325 MINT:MINT-1739970 STRING:5833.PFC0365w-1 PRIDE:O77325 EnsemblProtists:PFC0365w:mRNA GeneID:814402 KEGG:pfa:PFC0365w EuPathDB:PlasmoDB:PF3D7_0308600 ProtClustDB:CLSZ2433438 Uniprot:O77325) HSP 1 Score: 129.028 bits (323), Expect = 4.551e-34 Identity = 64/137 (46.72%), Postives = 92/137 (67.15%), Query Frame = 0 Query: 3 TFICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQ 139 + IC+IS ++PE PVIS K+G +++KRLIEK + N G+ PVS + ++E+L IK +VKP+P + +SIP +L Q EWD+++ F LR + R ELSH+LYQ+DAA RVIA+L KE +E + LK Q Sbjct: 2 SIICTISGQTPEEPVIS-KTGYIFEKRLIEKHI-INYGICPVSGEVLTLEDLYPIKNEKIVKPRPITASSIPGLLSIFQTEWDSIISEMFSLRTHVNDIRNELSHSLYQYDAATRVIAKLLKEKNGYKEEIENLKKQ 136
BLAST of EMLSAG00000000275 vs. GO
Match: - (symbol:PFC0365w "conserved protein, putative" species:5833 "Plasmodium falciparum" [GO:0016363 "nuclear matrix" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR004226 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR019775 PROSITE:PS00678 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0016363 GO:GO:0005874 GO:GO:0007021 GO:GO:0000151 EMBL:AL844502 KO:K10599 InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV SUPFAM:SSF46988 PIR:T18432 RefSeq:XP_001351160.1 ProteinModelPortal:O77325 SMR:O77325 IntAct:O77325 MINT:MINT-1739970 STRING:5833.PFC0365w-1 PRIDE:O77325 EnsemblProtists:PFC0365w:mRNA GeneID:814402 KEGG:pfa:PFC0365w EuPathDB:PlasmoDB:PF3D7_0308600 ProtClustDB:CLSZ2433438 Uniprot:O77325) HSP 1 Score: 129.028 bits (323), Expect = 4.551e-34 Identity = 64/137 (46.72%), Postives = 92/137 (67.15%), Query Frame = 0 Query: 3 TFICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQ 139 + IC+IS ++PE PVIS K+G +++KRLIEK + N G+ PVS + ++E+L IK +VKP+P + +SIP +L Q EWD+++ F LR + R ELSH+LYQ+DAA RVIA+L KE +E + LK Q Sbjct: 2 SIICTISGQTPEEPVIS-KTGYIFEKRLIEKHI-INYGICPVSGEVLTLEDLYPIKNEKIVKPRPITASSIPGLLSIFQTEWDSIISEMFSLRTHVNDIRNELSHSLYQYDAATRVIAKLLKEKNGYKEEIENLKKQ 136
BLAST of EMLSAG00000000275 vs. GO
Match: - (symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9606 "Homo sapiens" [GO:0001833 "inner cell mass cell proliferation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA] [GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0045665 "negative regulation of neuron differentiation" evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing, via spliceosome" evidence=IEA] [GO:0048711 "positive regulation of astrocyte differentiation" evidence=IEA] GO:GO:0005634 GO:GO:0005737 GO:GO:0005811 GO:GO:0045665 GO:GO:0008610 GO:GO:0048711 GO:GO:0001833 EMBL:AP003721 GO:GO:0048026 InterPro:IPR013915 Pfam:PF08606 EMBL:AP000777 HGNC:HGNC:17896 ProteinModelPortal:F5H2I0 Ensembl:ENST00000546152 NextBio:35508429 ArrayExpress:F5H2I0 Bgee:F5H2I0 Uniprot:F5H2I0) HSP 1 Score: 105.145 bits (261), Expect = 9.355e-28 Identity = 52/64 (81.25%), Postives = 55/64 (85.94%), Query Frame = 0 Query: 88 MLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSAPATPAT 151 ML SF LRQQLQT RQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQA + A P++ Sbjct: 1 MLHSFTLRQQLQTTRQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGLIVPQAVPSS 64
BLAST of EMLSAG00000000275 vs. GO
Match: - (symbol:orf19.6740 species:5476 "Candida albicans" [GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA] [GO:0071006 "U2-type catalytic step 1 spliceosome" evidence=IEA] [GO:0005635 "nuclear envelope" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000974 "Prp19 complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0000349 "generation of catalytic spliceosome for first transesterification step" evidence=IEA] InterPro:IPR003613 InterPro:IPR015943 Pfam:PF04564 SMART:SM00504 CGD:CAL0004852 Gene3D:2.130.10.10 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AACQ01000029 EMBL:AACQ01000028 InterPro:IPR011044 SUPFAM:SSF50969 eggNOG:NOG319177 KO:K10599 OrthoDB:EOG7V76GC InterPro:IPR013915 Pfam:PF08606 RefSeq:XP_719721.1 RefSeq:XP_719838.1 ProteinModelPortal:Q5ADV1 STRING:5476.CAL0004852 GeneID:3638529 GeneID:3638592 KEGG:cal:CaO19.14032 KEGG:cal:CaO19.6740 HOGENOM:HOG000248784 Uniprot:Q5ADV1) HSP 1 Score: 101.293 bits (251), Expect = 2.757e-24 Identity = 63/154 (40.91%), Postives = 92/154 (59.74%), Query Frame = 0 Query: 5 ICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASP------LVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSAPATPATP 152 ICSIS E PV+SPKSG ++ ++ I + + G DP++ +P + ELI++K + P PS +SIP++L + Q+EWDA++L F L++QLQ+A+QELS ALY+ DAA V A+ +E AREAL L + P T P Sbjct: 2 ICSISGEIATDPVVSPKSGAIFQRKHIVNYI-ATSGTDPITDEPLTESELISLKVNEKSTAIAQPSPPDPSNSSIPSLLSTFQNEWDAIVLEVFTLKKQLQSAKQELSIALYRQDAAVNVAAKAIRERDEAREALEKLSSSINLSDVPDTNTPP 154
BLAST of EMLSAG00000000275 vs. C. finmarchicus
Match: gi|592776634|gb|GAXK01177934.1| (TSA: Calanus finmarchicus comp15290_c3_seq1 transcribed RNA sequence) HSP 1 Score: 213.001 bits (541), Expect = 2.259e-64 Identity = 101/137 (73.72%), Postives = 118/137 (86.13%), Query Frame = 0 Query: 1 MTTFICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLK 137 M + C++SNE P+ PV+SP SG VY++RLIEK + + G+DP++ +P ++E+LI +K SPLVKPKPPS TSIPAILKSLQDEWDAVML SF LRQQLQTARQELSHALYQHDAACRVIARL KEVTAAREALATLK Sbjct: 1235 MASLTCALSNEVPDCPVVSPVSGQVYERRLIEKYV-TEAGIDPINKEPLTIEQLIEVKCSPLVKPKPPSATSIPAILKSLQDEWDAVMLHSFTLRQQLQTARQELSHALYQHDAACRVIARLNKEVTAAREALATLK 1642
BLAST of EMLSAG00000000275 vs. C. finmarchicus
Match: gi|592796293|gb|GAXK01158275.1| (TSA: Calanus finmarchicus comp66037_c0_seq1 transcribed RNA sequence) HSP 1 Score: 35.4242 bits (80), Expect = 5.467e-2 Identity = 20/43 (46.51%), Postives = 28/43 (65.12%), Query Frame = 0 Query: 4 FICS-ISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVS 45 ++C IS E + PVI+P SG+ YD+R I + LE G DPV+ Sbjct: 1393 YMCGKISFEILKDPVITP-SGITYDRRDITEHLERVGHFDPVT 1518
BLAST of EMLSAG00000000275 vs. C. finmarchicus
Match: gi|592920995|gb|GAXK01037380.1| (TSA: Calanus finmarchicus comp5526821_c0_seq1 transcribed RNA sequence) HSP 1 Score: 29.6462 bits (65), Expect = 2.813e+0 Identity = 19/50 (38.00%), Postives = 25/50 (50.00%), Query Frame = 0 Query: 85 DAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALA 134 DAV + S LR QLQ A QE Q A + + KEVT+ R ++ Sbjct: 117 DAVRIESLKLRNQLQEATQETRVGFQQVSALRKKLLTAQKEVTSQRASMG 266
BLAST of EMLSAG00000000275 vs. C. finmarchicus
Match: gi|592850527|gb|GAXK01107017.1| (TSA: Calanus finmarchicus comp37918_c2_seq1 transcribed RNA sequence) HSP 1 Score: 28.8758 bits (63), Expect = 9.151e+0 Identity = 20/53 (37.74%), Postives = 29/53 (54.72%), Query Frame = 0 Query: 2 TTFICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEEL 54 T F C+I E E PVI P SG + D++ IE+ + S DP + P + + L Sbjct: 2924 TEFECAIMGEMMEDPVILP-SGNMCDRKNIERHILSTPN-DPFNRQPLTEDML 3076
BLAST of EMLSAG00000000275 vs. L. salmonis peptides
Match: EMLSAP00000000275 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1041:87486:87953:1 gene:EMLSAG00000000275 transcript:EMLSAT00000000275 description:"augustus_masked-LSalAtl2s1041-processed-gene-0.9") HSP 1 Score: 300.442 bits (768), Expect = 3.466e-105 Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0 Query: 1 MTTFICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSAPATPATPSAP 155 MTTFICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSAPATPATPSAP Sbjct: 1 MTTFICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSAPATPATPSAP 155
BLAST of EMLSAG00000000275 vs. L. salmonis peptides
Match: EMLSAP00000002716 (pep:novel supercontig:LSalAtl2s:LSalAtl2s156:84236:84442:1 gene:EMLSAG00000002716 transcript:EMLSAT00000002716 description:"snap_masked-LSalAtl2s156-processed-gene-0.2") HSP 1 Score: 90.8929 bits (224), Expect = 3.049e-24 Identity = 45/68 (66.18%), Postives = 51/68 (75.00%), Query Frame = 0 Query: 1 MTTFICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPP 68 M TF+ SI +S E P I KSGL +DK+LIEKVLESNG VDP+S DP VEELI IK SP +KPKPP Sbjct: 1 MMTFLSSIRKKSSEGPFIYDKSGLFFDKQLIEKVLESNGVVDPISKDPLIVEELIGIKTSPFLKPKPP 68
BLAST of EMLSAG00000000275 vs. SwissProt
Match: gi|1709753|sp|P32523.2|PRP19_YEAST (RecName: Full=Pre-mRNA-processing factor 19; AltName: Full=RING-type E3 ubiquitin transferase PRP19) HSP 1 Score: 90.1225 bits (222), Expect = 1.403e-20 Identity = 49/129 (37.98%), Postives = 80/129 (62.02%), Query Frame = 0 Query: 5 ICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAI----KASPLVKPKP----PSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKE 125 +C+IS + P PV+SPKS +++K L+E+ ++ G DP++ +P S+EE++ I + + L + + SIP +L SLQ+EWDA+ML +F LR L + ++LS +Y+ DAA V A+L E Sbjct: 2 LCAISGKVPRRPVLSPKSRTIFEKSLLEQYVKDTGN-DPITNEPLSIEEIVEIVPSAQQASLTESTNSATLKANYSIPNLLTSLQNEWDAIMLENFKLRSTLDSLTKKLSTVMYERDAAKLVAAQLLME 129
BLAST of EMLSAG00000000275 vs. Select Arthropod Genomes
Match: gb|KFM80282.1| (Pre-mRNA-processing factor 19, partial [Stegodyphus mimosarum]) HSP 1 Score: 206.838 bits (525), Expect = 8.680e-69 Identity = 103/141 (73.05%), Postives = 116/141 (82.27%), Query Frame = 0 Query: 6 CSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSAP 146 C++SNE PE PV+SP SG +++KRLI K ++ NG DP++ S E LI IK VKP+PPS TSIPAILK+LQDEWDAVML SF LRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQA I +AP Sbjct: 5 CALSNEVPEQPVVSPASGSIFEKRLIVKYIQENG-TDPINGKELSEESLIEIKTPSAVKPRPPSATSIPAILKTLQDEWDAVMLHSFTLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGIAAAP 144
BLAST of EMLSAG00000000275 vs. Select Arthropod Genomes
Match: XP_392284.2 (PREDICTED: pre-mRNA-processing factor 19 [Apis mellifera]) HSP 1 Score: 213.772 bits (543), Expect = 4.326e-67 Identity = 106/144 (73.61%), Postives = 118/144 (81.94%), Query Frame = 0 Query: 6 CSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSAPATP 149 C+ISNE PE PV+SP SG +++KRLIEK L NG VDP++ + ++LI IK + +VKPKPPS TSIPAILK LQDEWDAVML SF LRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQA I A P Sbjct: 5 CAISNEVPEHPVVSPVSGSIFEKRLIEKYLAENG-VDPITGKELTADQLIDIKTTAIVKPKPPSATSIPAILKILQDEWDAVMLHSFTLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGIVQATTIP 147
BLAST of EMLSAG00000000275 vs. Select Arthropod Genomes
Match: EFX80977.1 (hypothetical protein DAPPUDRAFT_303758 [Daphnia pulex]) HSP 1 Score: 204.527 bits (519), Expect = 1.570e-63 Identity = 102/145 (70.34%), Postives = 119/145 (82.07%), Query Frame = 0 Query: 6 CSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSAPATPA 150 CS+SNE PE PV+SP SG V+++RLIEK + NG VDP++ +V++LI IK P+VKPK PS TSIPA+LKSLQDEWDAVML SF LRQQLQTARQELSHALYQHDAACRVIARL KEV+ AREALATLKPQ +A +TP+ Sbjct: 5 CSLSNEVPEHPVVSPVSGSVFERRLIEKYIADNG-VDPINGKEITVDQLIEIKTPPIVKPKVPSATSIPAVLKSLQDEWDAVMLNSFTLRQQLQTARQELSHALYQHDAACRVIARLHKEVSTAREALATLKPQTGY-AAVSTPS 147
BLAST of EMLSAG00000000275 vs. Select Arthropod Genomes
Match: EAA04221.5 (AGAP007217-PA [Anopheles gambiae str. PEST]) HSP 1 Score: 203.756 bits (517), Expect = 2.649e-63 Identity = 98/147 (66.67%), Postives = 116/147 (78.91%), Query Frame = 0 Query: 3 TFICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSAPATP 149 + +CSISNE PE P ISPKSG ++++RLIEK + N DP++ P + EELI +K P+V+PKPPS TSIPA LK++QDEWDA+ML SF RQQLQTARQELSHALYQHDAACRVIARL KEV AAREALATLKPQ + + A P Sbjct: 2 SLVCSISNEVPEHPCISPKSGAIFERRLIEKYIVENE-CDPINGQPLTAEELIDVKTPPIVRPKPPSATSIPATLKTMQDEWDALMLHSFTQRQQLQTARQELSHALYQHDAACRVIARLNKEVAAAREALATLKPQTGMSAIQAAP 147
BLAST of EMLSAG00000000275 vs. Select Arthropod Genomes
Match: gb|KYB25334.1| (hypothetical protein TcasGA2_TC034425 [Tribolium castaneum]) HSP 1 Score: 208.379 bits (529), Expect = 3.599e-62 Identity = 101/143 (70.63%), Postives = 117/143 (81.82%), Query Frame = 0 Query: 4 FICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSAP 146 C++SNE PE PV+SP SG +++KR+IEK ++ +G DP+S D +V++LI IK P+VKPKPPS TSIPA LK LQDEWDAVML SF RQQLQTARQELSHALYQHDAACRVIARL KEVTAAREALATLKPQA I + P Sbjct: 1242 LFCALSNEVPEHPVVSPTSGAIFEKRIIEKYIQEHGK-DPISGDELTVDKLIEIKTPPIVKPKPPSATSIPATLKLLQDEWDAVMLYSFTQRQQLQTARQELSHALYQHDAACRVIARLNKEVTAAREALATLKPQAGIITVP 1383
BLAST of EMLSAG00000000275 vs. Select Arthropod Genomes
Match: AAF57684.1 (Pre-RNA processing factor 19 [Drosophila melanogaster]) HSP 1 Score: 181.8 bits (460), Expect = 9.518e-55 Identity = 98/143 (68.53%), Postives = 113/143 (79.02%), Query Frame = 0 Query: 4 FICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSAP 146 +C+++NE PE PV+SP SG V++KR+IEK L NG DP+S EELI IK +VKPKPPS TSIPA LK++QDEWDA+M+ SF RQQLQT RQELSHALYQHDAACRVIARL KEV AAREALATLKPQA I +AP Sbjct: 3 LVCALTNEVPETPVVSPHSGAVFEKRVIEKYLLENG-CDPISGKELKPEELIEIKTPAVVKPKPPSATSIPATLKTMQDEWDALMIHSFTQRQQLQTTRQELSHALYQHDAACRVIARLNKEVAAAREALATLKPQAGIANAP 144
BLAST of EMLSAG00000000275 vs. Select Arthropod Genomes
Match: gb|KPM10618.1| (pre-mRNA-processing factor 19-like protein [Sarcoptes scabiei]) HSP 1 Score: 179.874 bits (455), Expect = 3.715e-54 Identity = 85/138 (61.59%), Postives = 109/138 (78.99%), Query Frame = 0 Query: 3 TFICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQA 140 + +C +S + PE PV+SP SG +++KRLI K LE VDP+ + +ELI IK ++KPKPPS TSIPA+LK+LQDEWDA+ML SF LRQQLQ RQEL+++LYQHDAACRVIARL+KE+TAAR+ALA LKP++ Sbjct: 2 SLVCVLSEQVPEEPVVSPYSGAIFEKRLILKYLEEKK-VDPICGREMTADELIEIKVPSIIKPKPPSATSIPALLKTLQDEWDAIMLHSFTLRQQLQATRQELTYSLYQHDAACRVIARLSKELTAARDALAKLKPKS 138
BLAST of EMLSAG00000000275 vs. Select Arthropod Genomes
Match: EEB09812.1 (pre-mRNA-splicing factor, putative [Pediculus humanus corporis]) HSP 1 Score: 141.739 bits (356), Expect = 6.608e-40 Identity = 68/78 (87.18%), Postives = 71/78 (91.03%), Query Frame = 0 Query: 69 SGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSAP 146 S TSIPAILK+LQDEWDAVML SF RQQLQTARQELSHALYQHDAACRVIARL+KEVTAAREALATLKPQA + S P Sbjct: 17 SATSIPAILKTLQDEWDAVMLHSFTQRQQLQTARQELSHALYQHDAACRVIARLSKEVTAAREALATLKPQAGVTSNP 94
BLAST of EMLSAG00000000275 vs. nr
Match: gi|225718334|gb|ACO15013.1| (Pre-mRNA-processing factor 19 [Caligus clemensi]) HSP 1 Score: 255.758 bits (652), Expect = 1.348e-80 Identity = 124/144 (86.11%), Postives = 132/144 (91.67%), Query Frame = 0 Query: 1 MTTFICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPS 144 MTTFICSISNESPE PV+SP SGLV++KRLIEK LESNG +DP+S DP SV +LI I++SPLVKPKPPSGTSIP ILKSLQDEWDAVML SF LRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAI S Sbjct: 1 MTTFICSISNESPENPVLSPVSGLVHEKRLIEKALESNGSLDPISKDPLSVSDLIPIRSSPLVKPKPPSGTSIPGILKSLQDEWDAVMLHSFTLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIAS 144
BLAST of EMLSAG00000000275 vs. nr
Match: gi|826410767|ref|XP_012541202.1| (PREDICTED: pre-mRNA-processing factor 19-like, partial [Monomorium pharaonis]) HSP 1 Score: 217.238 bits (552), Expect = 4.047e-70 Identity = 108/144 (75.00%), Postives = 122/144 (84.72%), Query Frame = 0 Query: 6 CSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSAPATP 149 C+ISNE PE PVISP SG ++++RLIEK + NG VDP++ ++E+LI IKA+P+VKPKPPS TSIPAILK +QDEWDAVML SF LRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQA I A A P Sbjct: 5 CAISNEVPEHPVISPVSGSIFERRLIEKYVTENG-VDPINGKELAIEQLIDIKATPIVKPKPPSATSIPAILKIMQDEWDAVMLHSFTLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGIVQATAIP 147
BLAST of EMLSAG00000000275 vs. nr
Match: gi|358342425|dbj|GAA35974.2| (pre-mRNA-processing factor 19 [Clonorchis sinensis]) HSP 1 Score: 228.024 bits (580), Expect = 5.807e-69 Identity = 110/140 (78.57%), Postives = 121/140 (86.43%), Query Frame = 0 Query: 3 TFICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAI 142 + ICS+SNE PE PVISPKSG V+++R+IEK L+ NG DP+ P +VEELI IK SP V+PKPPS TSIPAILK+LQDEWDAVML SF LRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQA I Sbjct: 73 SLICSLSNEVPEHPVISPKSGHVFERRVIEKYLQENG-TDPIDQQPLTVEELIEIKTSPFVRPKPPSATSIPAILKTLQDEWDAVMLQSFTLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGI 211
BLAST of EMLSAG00000000275 vs. nr
Match: gi|1058069940|gb|JAS38631.1| (hypothetical protein g.4969, partial [Cuerna arida]) HSP 1 Score: 213.772 bits (543), Expect = 8.514e-69 Identity = 106/145 (73.10%), Postives = 120/145 (82.76%), Query Frame = 0 Query: 3 TFICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSAPA 147 + C+ISNE PE PV+SP SG +++KRLIEK + NG +DP+S +VE+LI IK +P+VKPKPPS TSIPAILK+LQDEWDAVML SF RQQLQTARQELSHALYQHDAACRVI RLTKEVTAAREALATLKPQA I PA Sbjct: 2 SLTCAISNEVPEHPVVSPVSGAIFEKRLIEKYIIENG-IDPISGKELAVEQLIEIKTTPVVKPKPPSATSIPAILKTLQDEWDAVMLHSFTQRQQLQTARQELSHALYQHDAACRVIGRLTKEVTAAREALATLKPQAGIAQPPA 145
BLAST of EMLSAG00000000275 vs. nr
Match: gi|780703264|ref|XP_011702580.1| (PREDICTED: pre-mRNA-processing factor 19-like, partial [Wasmannia auropunctata]) HSP 1 Score: 211.46 bits (537), Expect = 6.462e-68 Identity = 106/142 (74.65%), Postives = 119/142 (83.80%), Query Frame = 0 Query: 8 ISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSAPATP 149 ISNE PE PVISP SG ++++RLIEK + NG VDP++ S+++LI IKA+P+VKPKPPS TSIPAILK +QDEWDAVML SF LRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQA I A P Sbjct: 2 ISNEVPEHPVISPVSGSIFERRLIEKYVTENG-VDPINGKELSIDQLIDIKATPIVKPKPPSATSIPAILKIMQDEWDAVMLHSFTLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGIVQATTIP 142
BLAST of EMLSAG00000000275 vs. nr
Match: gi|56756248|gb|AAW26299.1| (SJCHGC06229 protein [Schistosoma japonicum]) HSP 1 Score: 223.402 bits (568), Expect = 7.849e-68 Identity = 107/140 (76.43%), Postives = 120/140 (85.71%), Query Frame = 0 Query: 3 TFICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAI 142 + +CS+SNE PE PV+SP+SG ++++RLIEK L NG DP+ P +VEELI IKAS V+PKPPS TSIPAILK+LQDEWDAVML SF LRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQA I Sbjct: 2 SLLCSLSNEVPEHPVVSPRSGHIFERRLIEKYLSENG-TDPIDQQPLAVEELIDIKASAFVRPKPPSATSIPAILKTLQDEWDAVMLQSFTLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGI 140
BLAST of EMLSAG00000000275 vs. nr
Match: gi|684393898|ref|XP_009170736.1| (hypothetical protein T265_07048 [Opisthorchis viverrini] >gi|663049489|gb|KER25533.1| hypothetical protein T265_07048 [Opisthorchis viverrini]) HSP 1 Score: 223.787 bits (569), Expect = 1.118e-67 Identity = 108/137 (78.83%), Postives = 119/137 (86.86%), Query Frame = 0 Query: 3 TFICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQ 139 + ICS+SNE PE PVISPKSG V+++R+IEK L+ NG DP+ P +VEELI IK SP V+PKPPS TSIPAILK+LQDEWDAVML SF LRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQ Sbjct: 49 SLICSLSNEVPEHPVISPKSGHVFERRVIEKYLQENG-TDPIDQQPLTVEELIEIKTSPFVRPKPPSATSIPAILKTLQDEWDAVMLQSFTLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQ 184
BLAST of EMLSAG00000000275 vs. nr
Match: gi|815798095|ref|XP_012219721.1| (PREDICTED: pre-mRNA-processing factor 19 [Linepithema humile]) HSP 1 Score: 221.09 bits (562), Expect = 2.594e-67 Identity = 109/144 (75.69%), Postives = 122/144 (84.72%), Query Frame = 0 Query: 6 CSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSAPATP 149 C+ISNE PE PV+SP SG +++KRLIEK + NG VDP++ ++E+LI IKA+P+VKPKPPS TSIPAILK LQDEWDAVML SF LRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQA I A A P Sbjct: 5 CAISNEVPEHPVVSPVSGSIFEKRLIEKYVSENG-VDPINGKELTIEQLIDIKATPIVKPKPPSATSIPAILKILQDEWDAVMLHSFTLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGIVQATAIP 147
BLAST of EMLSAG00000000275 vs. nr
Match: gi|817195405|ref|XP_012273236.1| (PREDICTED: pre-mRNA-processing factor 19 isoform X1 [Orussus abietinus]) HSP 1 Score: 220.32 bits (560), Expect = 6.661e-67 Identity = 110/144 (76.39%), Postives = 120/144 (83.33%), Query Frame = 0 Query: 6 CSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSAPATP 149 C+ISNE PE PVISP SG +++KRLIEK L NG VDP++ +VE+LI +K +PLVKPKPPS TSIPAILK LQDEWDAVML SF LRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQA I A P Sbjct: 5 CAISNEVPEHPVISPVSGSIFEKRLIEKFLAENG-VDPINGKELTVEQLIDVKTTPLVKPKPPSATSIPAILKILQDEWDAVMLHSFTLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGIVQAVVIP 147
BLAST of EMLSAG00000000275 vs. nr
Match: gi|1058243280|gb|JAT25156.1| (hypothetical protein g.29429, partial [Graphocephala atropunctata]) HSP 1 Score: 213.772 bits (543), Expect = 1.417e-66 Identity = 104/144 (72.22%), Postives = 118/144 (81.94%), Query Frame = 0 Query: 3 TFICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSAP 146 + C+ISNE PE PV+SP SG +++KRLIEK + NG +DP+S ++E LI IK +P+VKPKPPS TSIPAILK+LQDEWDAVML SF RQQLQTARQELSHALYQHDAACRVI RLTKEVTAAREALATLKPQA I P Sbjct: 2 SLTCAISNEVPEHPVVSPASGAIFEKRLIEKYIIENG-IDPISGKELAIEHLIEIKTTPVVKPKPPSATSIPAILKTLQDEWDAVMLHSFTQRQQLQTARQELSHALYQHDAACRVIGRLTKEVTAAREALATLKPQAGIAQPP 144 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000275 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 25
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BLAST of EMLSAG00000000275 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 4
BLAST of EMLSAG00000000275 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 2
BLAST of EMLSAG00000000275 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 11
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BLAST of EMLSAG00000000275 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 8
BLAST of EMLSAG00000000275 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
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BLAST of EMLSAG00000000275 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1041:87486..87953+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000275-683041 ID=EMLSAG00000000275-683041|Name=EMLSAG00000000275|organism=Lepeophtheirus salmonis|type=gene|length=468bp|location=Sequence derived from alignment at LSalAtl2s1041:87486..87953+ (Lepeophtheirus salmonis)back to top Add to Basket
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