EMLSAG00000000285, EMLSAG00000000285-683051 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000000285
Unique NameEMLSAG00000000285-683051
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
BLAST of EMLSAG00000000285 vs. L. salmonis peptides
Match: EMLSAP00000000285 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1042:49999:56450:1 gene:EMLSAG00000000285 transcript:EMLSAT00000000285 description:"maker-LSalAtl2s1042-snap-gene-0.38")

HSP 1 Score: 465.307 bits (1196), Expect = 1.089e-167
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0
Query:    1 MLTPIPFSLELTPTVVIHSPSSPGESICDIQDTHTVQQGGGTSSTSSSKQHDFSFPSFASLRGRRSSVDIGSSYTCNKNESFISTRRRMSSFPPMEGEGKEALLSLEKTKIDHQQQQGASSKPKNASSSSSPLKFIPVKNKLKWMSSIDVSSSSISSPPSSQYSSPSAFDRNVVVFPHRKVEDVPGIFIPHKSSSSAHHYISPNLSGHHHHHRKQISPLIIRDVEGGGGGVGV 233
            MLTPIPFSLELTPTVVIHSPSSPGESICDIQDTHTVQQGGGTSSTSSSKQHDFSFPSFASLRGRRSSVDIGSSYTCNKNESFISTRRRMSSFPPMEGEGKEALLSLEKTKIDHQQQQGASSKPKNASSSSSPLKFIPVKNKLKWMSSIDVSSSSISSPPSSQYSSPSAFDRNVVVFPHRKVEDVPGIFIPHKSSSSAHHYISPNLSGHHHHHRKQISPLIIRDVEGGGGGVGV
Sbjct:    1 MLTPIPFSLELTPTVVIHSPSSPGESICDIQDTHTVQQGGGTSSTSSSKQHDFSFPSFASLRGRRSSVDIGSSYTCNKNESFISTRRRMSSFPPMEGEGKEALLSLEKTKIDHQQQQGASSKPKNASSSSSPLKFIPVKNKLKWMSSIDVSSSSISSPPSSQYSSPSAFDRNVVVFPHRKVEDVPGIFIPHKSSSSAHHYISPNLSGHHHHHRKQISPLIIRDVEGGGGGVGV 233          
The following BLAST results are available for this feature:
BLAST of EMLSAG00000000285 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000000285 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000000285 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000002851.089e-167100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1042:4999... [more]
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BLAST of EMLSAG00000000285 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000000285 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000000285 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000000285 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1042supercontigLSalAtl2s1042:49999..56450 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s1042-snap-gene-0.38
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000000285 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000000285EMLSAT00000000285-696132Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s1042:49999..56450+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000000285-683051 ID=EMLSAG00000000285-683051|Name=EMLSAG00000000285|organism=Lepeophtheirus salmonis|type=gene|length=6452bp|location=Sequence derived from alignment at LSalAtl2s1042:49999..56450+ (Lepeophtheirus salmonis)
ATGCTCACGCCAATTCCTTTCTCACTTGAACTTACACCTACAGTTGTTAT TCATTCTCCCAGTTCTCCTGGTGAGAGTATCTGTGACATTCAAGATACGT TAAACCACTCTAAATCACGAACTACTCGTTCTCAAAGTGTTTGTGTTCCA CTGGCTCAGCCCCTCTCCTCTTCCTTAAATGATGACAATGATGATAAAAG CAGGAATCAACAACAACAACAGCCCTCTTCATCCANNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNTTTTTCATATTCAAAAACTGCCAAGAA GAGGATGATACCCACGGGAGTGCTAGGKCACCTCTCCTCTCTCTTCATCA TCCAACAGTCATACTGTACAGCAAGGAGGAGGAACTTCTTCTACTAGCTC CTCCAAGCAACATGACTTCTCCTTTCCTTCATTTGCATCTTTGCGAGGTC GGCGCAGCTCAGTGGACATTGGGAGTAGCTATACTTGTAATAAAAATGAG TCCTTCATATCTACGCGCCGTCGTATGTCTAGCTTCCCACCTATGGAAGG AGAGGGTAAAGAAGCATTGTTATCTCTTGAGAAAACAAAGATAGATCATC AACAACAACAGGGAGCTTCCTCAAAGCCCAAGAATGCATCATCCTCATCC AGTCCACTTAAGTTCATACCTGTTAAAAACAAATTAAAGTGGATGAGTTC TATCGATGTGTCATCCTCATCAATATCCTCACCACCGTCCTCTCAATATT CTTCTCCTTCTGCTTTTGATCGAAATGTTGTTGTTTTCCCTCATAGAAAG GTAGAAGATGTTCCGGGGATATTTATTCCCCATAAATCCTCCTCATCTGC ACATCACTATATTTCACCCAACCTCTCTGGGCATCATCACCATCATCGAA AGCAAATATCCCCTCTTATTATTCGGTAAGGAAGAAGCACCATTTCTCAA TTTCTCTTGTCTCATTCAACACATAAATAAGATACTTATTTAATGTCATC TTAATTATGTCACTTAGTGTCACACGCACACTCACTAAACCTATCTACTT ACCTACATAAATGCTTTTGTTCCTCAATGTTTATTCATAAAATAGCAATA ACTCTTTGTTTATCATCATTTTAGTAGTACTTATTTAATTAAGCATTGTC TGGTATTACTTATTATTAGTAGTAGTAGTAATAGTATGATTATCGACTTT CTATTTTTAATCATTTTAAACACTCTAGTTCGTTAGGTGGATGGATAGAT AAGTTGTATTTTTTTKTTTCWTTTTCCATCTTYTTCTTTTTTCTTCTTTT TTTTTTTTTTTTTGTTTGGTTNGGATAGATAAGTTGTATTTTTTGTTTCA TTTTCCATCTTCTTCTTTTTCTTCTTTTTTTTTTTGTTGGTCTATGGGTG CGTGACTTAAAAAAGGAGAGAGGAGTAAGAAGTAGAAAATATTAAGGGGA AAAAAAGAATAAGATTTGATTTCTTACATCTTTAACATTTTGAAAATGAT GTACATTTAATAATAATAAAAATAATAATACAAAAATTCATTCATTCATT TATTCTACTTCGTCTTTTAAGATAGTAGAAGAATAGAAGAAGTGAGAAGG GAGGGGGGGGGGGGGGGGGAAMTAATCATCTCTCTTTTCTATGTATGTAT GTTATTATACTTATATTTGACTTATTAATATTATGCTCATTGAAGTGTGG AAGAAAGGAGAAAAGCAAGAAAGAAAGAAGTGTGTGTAGTCAAACTTTAA GAAAGTAGAATGAAATATAGTAGAAGCAATACGTATCTATGTGTCTGTCT CCATCCAGAAAGTTCATGCAACAGGAGGCTTTATTCAATGGCCTTCACAG GGGGAGGGAGGCCATTTGTAAACTTCTGCAAATTTACAAATCTATAGTTT TTAAGGAAAAAAATTTAGTTCTTTGTTAGGGGATCTTGTATTTAAAAAAA GAAATATCAGATATTCTTTTAACTAGTGGACCCTCAGAATATTGTGGGTT CTCCAAACTATCTAGATCAGGGATGTCCAACCCGTACCCCGCAGGTCGTA ATGCTGCCCACTTAATGCTTAAGTGTGACCCAATACTCGTTCACAATTCA AGTTGTAATTTTGAGCTAAATTCTCACAATATCATCAAAACGCGTTGAAC GCACAAACATTGAAAAATATTTCCCAAATAAAGGAATGTTTGAAAAATTA TCCCTTGGAGGAAAAAGTTTTAATGAGAAAACCGAAAGAATTACTTTCAG GATTTCTTTTCTAAAATATGTTCATTCGATCAAATTTTGCAGTGGAACAA AAAATTTAATTTAAAAAATAATTACAATTGGCAATTACATAGCAATTGCA GATATATTATGTCGATAGAGGAATCAGTAGAAAGCGAGAGTGATGGTGGG GGTTGTGGTAAACGTATGGGGTTTGACGTTTAATTGAAGAAAGGCATTAT CAGTTGCTGTTCTTGTTATTTGCCCTCTCATAATAATAAATAATATGTAC TACATTGTACATTAGGGTGGGTTTTTTTTATTCCTTTTTTCGAATTTTGA TTACGGCTAGTTCGAAAAAACTGTCAAGAGGTAAGAAAATAACCTATACA AAATTTCACTTACCCTATGGAGCATAAAAATAGGATGAAATGGAAAAAAT ATTATCTTTCCTTTCTGAAAATGTAACGAAAAGGATGCGTGCTATACGCG GATCATCAAATTTTTTTAACTTTTTTCTCTTTTTTTTTCATATGATAATT TCAGGAAAAAAAACTTCTACAACACTGTTTATAAGATAAAAAGATGTGAA GGAAAATTATTTAACGCAAAATAGCTAAAAATGTTTTTTCAGTATCTATA TTCACTAAGTAAAGAGTTTTTGCTTTTTTTCATAATTTGATCGACATGTG CGACCTAAAAATGATTTTGTACGACAATGCAATTTTGTATAGGTAATTTT CATACCATATGTCAACTTTTCCGACCCACCCGTAATCGAAATTCGAAAAA AGTGGAAAATCAAACAGCTCTATTGTACACACATTATATTGTATAGAAAG AAAGAAAGACAACTTTTTTAACTGCATACATATTTAGTTTTTAACCACCA CTTCAAACTTGTCAATTTCCATTTTATTTTATTTTGTTTGATCTAAAAAC AAAAAATAAAATCATAATTATTATGCATTATTATAATACGCTTCGAAATT GACAAATCAATAAAACAGCAACAAAAAACTTTTTTATAAATTTTCTATCC ATCTCTCTCCACCCCCCTCTCTCTCTCTCTCTTTCTTCTTTTTTGTTAGA TTTACATACATACAAGTAATAATCGAGATACTTAGAAAATATTGACTTGT ACCATACATACAGGGTGTCCACGATCAATTGGAACTATCTTAAAATTCAA CCTGCTTGATAAATATGGAATTTGGAGTGTATTTGTTAATATGAAAAAGT TAGACATGATATTAAACAATAAATTTATRCAACATMRCRRCCCRCASCAG CCACCATCTTCTCCATCCTGCCCCTAAAGGATTTGCATGCCCTGATGACT TCCGCGGAATCGACAGCATTCCACTCCCTCGTAATGGAGCCCTTCAGGGN NNNNNNNNNNNNNNNNNNNNNNCCGCGATGCTCTTGTGGCTAMCMGYAGK AAWMCCMCSGRTTGAGGKCGGGKGAGKTGGRGGGCCAGGKGTTGTGATCC CAGAAAGTGATGTCGTGTGAGTTGAAGAGGTTAGTGGTCCTCATGGCGAT GKGTGCGGGCGCTGAGTCTTGTTGGAATATGCACTACCTCCTAGCAGCCG TATCCTTCATCCAGGGAATGACGAACTCCTCCATGACTTCGCAGTACCTT ATCGTGTTAACCCTTTCCTTGAGATTGAAGCACCTCACCGGTGCTGCAGA TGATACCCAGGGTCATCACGGAGGCCGGGAACTTTGTGGTGAAGACCGCA GGGMCCTCTTCTCTCTCCTTGGTAAGCCACCTGTCATTCTGGACGTTGCA GCTTCTGTCGACAGTCCAGTTCTTCTCGTCAGAGAAGAAAATGATTCTTC CTCCATGGCTCTTCAGATCATTGAGGAGACGCTTACCGTTGGTGAGCCTA GTGGCCTTCATGGATGCCGTGAGGATGTGCTGTTTGGCCATTCGGTATGG CCTGTATCCGAGATCCTCATTCATAGCCTCGGAGACCAGCTGCTTGCTCA CTCCACGGTTCTTGGCCAACCTGGACAAGGAAGTCCCCGGCAAAGCCTTG ATAGACTTCCGGAGTCCTTCAAGGAAGGGGGGAGTGCGGATTCGGTCACT TCTCATATTGTGGGCCTTGCGGCAGACCTTTCCCTCAAGCTCCCAGGCAT TGAATACCCGGTACATCGYGGTCTTGGGGKAGTTAAGAAGCTTGTAGATA GCRGAGGKCTTGTGYCCCGCGMAAGCCAATTCGAGGATGGTGTCTCTCCT TGCTTGTTCCATGATGACTATTGTTTGTTGTCAAAATAATTGTGGTGGAA GTTATAGTGTATTATTCATGCAACCTTTTATATTAGTATGATTTAACCTC GAATATCCACATTATGGATCTGGATGAAGTTTAAAGTAGTTCCAACTTAT CGTGGACACCCTGTACACTGGGGGTCCTCGCATAATGCGGTTTCAAACAC CGCGGATTATACGCATAACGCAGTGTTTGGAATTATTCTTACTCCCCATA TAGAGTGGGGTATATTCCCCTCATATTGCATTTTTTTATATTATTTATAT TTTTGAGTTGGGGTAGTGGGATGTGTCCTATAAGTATATAATTTGATGCC TAGGCTTAAAACTTTTGGTTATTACTAAATATACAAACTTTCACTTAAAA AAGCGGTGAATAAATATTAGTTAAGTACCGATATTCTAAGTATTAAAATG ACAGGATTACAAATCACCTCAATACTCAATCAATATTAAATTTTACGATT ATTTTACAAGCATCTTGTCCTGCATACTTTATTTTAAATAACTAATGATG AATAAAAAGTTTTTATTGCCTAACCTTACTTTTAAAAAAAGGAAAAATAG TGAAAAGTAGATTTTGAAAAATAATTTCCCCCATTTTACGGGTTTTAGTT CCAAAAAAATCCCCGCACATTGTAGATTTTTCTTGTTACCAAAAAACTGA GATAAGTGGAGACCCCTTGTATTGTAGCATTACTCTACGGCAGTAGTTCT CAAACTACTAATAGTGAGTAATATTATAAAGCAAGGTTTAAGTCCTTTTA TTTGTTGGTCCCATTTTGGCATCAAATAGTTGACTATTTTCCTTAATTTT ATGAAAAAATGTTTCAATTATTATAAAACTTGGTTGATTAGGCCCCATCA ACATTGCTGACTTGAACGTGAAAATGAACGGCTTAGCAAAATATATGACG TTTCTCCATATACTACTGAAGGGGAGATCGCGTGCAACGGTTCGAGAACA ACTTCTCTAAGCTATGTATATAATATCTGGATATTTCAATTCTCAAATAT TATAGAATTTTGTAAATAAGTCCCATAATTAAACAAAATATGTCGATGAA AAATACCTTTTTTTTATAAAATATTTATTTTTTATTGACTTTTTTAGAAA AGGCATATATTACAATGCTTGGAAATTTTTTCTGTTGTTAAATTTTCAAA GTTTTTGGAAACAACTGCTTTTTCTTTTGTACAAAATATTACAAAATTTG GTTACATTACATCAAATTTCCTGTTGATAAACTATTTTTGCGATTGGCAT TTCCATGGTACGAGAGAAAGGGTCGCAAAGACTCTTCATAACGCAGTGGT TCGTGTATATATTATGTATGTATAACTAGGAGGACGGGTGAAGGCACTCA CTCTTCCTTCTTTCTTTTTATATTTCTTGAAATATCTTCACTTCAATGTG TATGATGATTAATTATATATTATGAGTGGAAGTCTCATGAGATTAAACTA TATAATAGTTAGTGGGGACTTATAATAATAGACGTATGGATTCAAATTTA GTACTMCCACCACTCTCACCTTCTTGTTGATGGGTTAGTACTTAGTTGGA CGATTGGTTGGTTAATTCTGCAAACATTCTTGATTCTATCCTTTTTTTTT TTTAAACAAAAAAATTTCTTCTCACAACGCTATAGCTTATACATATGGTT TTTTTTTTCCATTTTCAGTGATGTCGAAGGTGGTGGTGGTGGGGTTGGTG TT
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