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Associated RNAi Experiments
Homology
BLAST of EMLSAG00000000285 vs. L. salmonis peptides
Match: EMLSAP00000000285 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1042:49999:56450:1 gene:EMLSAG00000000285 transcript:EMLSAT00000000285 description:"maker-LSalAtl2s1042-snap-gene-0.38") HSP 1 Score: 465.307 bits (1196), Expect = 1.089e-167 Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0
Query: 1 MLTPIPFSLELTPTVVIHSPSSPGESICDIQDTHTVQQGGGTSSTSSSKQHDFSFPSFASLRGRRSSVDIGSSYTCNKNESFISTRRRMSSFPPMEGEGKEALLSLEKTKIDHQQQQGASSKPKNASSSSSPLKFIPVKNKLKWMSSIDVSSSSISSPPSSQYSSPSAFDRNVVVFPHRKVEDVPGIFIPHKSSSSAHHYISPNLSGHHHHHRKQISPLIIRDVEGGGGGVGV 233
MLTPIPFSLELTPTVVIHSPSSPGESICDIQDTHTVQQGGGTSSTSSSKQHDFSFPSFASLRGRRSSVDIGSSYTCNKNESFISTRRRMSSFPPMEGEGKEALLSLEKTKIDHQQQQGASSKPKNASSSSSPLKFIPVKNKLKWMSSIDVSSSSISSPPSSQYSSPSAFDRNVVVFPHRKVEDVPGIFIPHKSSSSAHHYISPNLSGHHHHHRKQISPLIIRDVEGGGGGVGV
Sbjct: 1 MLTPIPFSLELTPTVVIHSPSSPGESICDIQDTHTVQQGGGTSSTSSSKQHDFSFPSFASLRGRRSSVDIGSSYTCNKNESFISTRRRMSSFPPMEGEGKEALLSLEKTKIDHQQQQGASSKPKNASSSSSPLKFIPVKNKLKWMSSIDVSSSSISSPPSSQYSSPSAFDRNVVVFPHRKVEDVPGIFIPHKSSSSAHHYISPNLSGHHHHHRKQISPLIIRDVEGGGGGVGV 233
The following BLAST results are available for this feature:
BLAST of EMLSAG00000000285 vs. GO
Analysis Date: 2014-04-02 ( Blast vs. GO)
Total hits: 0
| Match Name | E-value | Identity | Description | |
|---|
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BLAST of EMLSAG00000000285 vs. L. salmonis peptides
Analysis Date: 2014-05-10 ( Blastp vs. self)
Total hits: 1
| Match Name | E-value | Identity | Description | |
|---|
| EMLSAP00000000285 | 1.089e-167 | 100.00 | pep:novel supercontig:LSalAtl2s:LSalAtl2s1042:4999... | [more] |
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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s1042 | supercontig | LSalAtl2s1042:49999..56450 + |
Analyses
This gene is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Description | maker-LSalAtl2s1042-snap-gene-0.38 |
| Biotype | protein_coding |
| Evidence | IEA |
| Note | Hypothetical protein |
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1042:49999..56450+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAG00000000285-683051 ID=EMLSAG00000000285-683051|Name=EMLSAG00000000285|organism=Lepeophtheirus salmonis|type=gene|length=6452bp|location=Sequence derived from alignment at LSalAtl2s1042:49999..56450+ (Lepeophtheirus salmonis)
ATGCTCACGCCAATTCCTTTCTCACTTGAACTTACACCTACAGTTGTTAT
TCATTCTCCCAGTTCTCCTGGTGAGAGTATCTGTGACATTCAAGATACGT
TAAACCACTCTAAATCACGAACTACTCGTTCTCAAAGTGTTTGTGTTCCA
CTGGCTCAGCCCCTCTCCTCTTCCTTAAATGATGACAATGATGATAAAAG
CAGGAATCAACAACAACAACAGCCCTCTTCATCCANNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNTTTTTCATATTCAAAAACTGCCAAGAA
GAGGATGATACCCACGGGAGTGCTAGGKCACCTCTCCTCTCTCTTCATCA
TCCAACAGTCATACTGTACAGCAAGGAGGAGGAACTTCTTCTACTAGCTC
CTCCAAGCAACATGACTTCTCCTTTCCTTCATTTGCATCTTTGCGAGGTC
GGCGCAGCTCAGTGGACATTGGGAGTAGCTATACTTGTAATAAAAATGAG
TCCTTCATATCTACGCGCCGTCGTATGTCTAGCTTCCCACCTATGGAAGG
AGAGGGTAAAGAAGCATTGTTATCTCTTGAGAAAACAAAGATAGATCATC
AACAACAACAGGGAGCTTCCTCAAAGCCCAAGAATGCATCATCCTCATCC
AGTCCACTTAAGTTCATACCTGTTAAAAACAAATTAAAGTGGATGAGTTC
TATCGATGTGTCATCCTCATCAATATCCTCACCACCGTCCTCTCAATATT
CTTCTCCTTCTGCTTTTGATCGAAATGTTGTTGTTTTCCCTCATAGAAAG
GTAGAAGATGTTCCGGGGATATTTATTCCCCATAAATCCTCCTCATCTGC
ACATCACTATATTTCACCCAACCTCTCTGGGCATCATCACCATCATCGAA
AGCAAATATCCCCTCTTATTATTCGGTAAGGAAGAAGCACCATTTCTCAA
TTTCTCTTGTCTCATTCAACACATAAATAAGATACTTATTTAATGTCATC
TTAATTATGTCACTTAGTGTCACACGCACACTCACTAAACCTATCTACTT
ACCTACATAAATGCTTTTGTTCCTCAATGTTTATTCATAAAATAGCAATA
ACTCTTTGTTTATCATCATTTTAGTAGTACTTATTTAATTAAGCATTGTC
TGGTATTACTTATTATTAGTAGTAGTAGTAATAGTATGATTATCGACTTT
CTATTTTTAATCATTTTAAACACTCTAGTTCGTTAGGTGGATGGATAGAT
AAGTTGTATTTTTTTKTTTCWTTTTCCATCTTYTTCTTTTTTCTTCTTTT
TTTTTTTTTTTTTGTTTGGTTNGGATAGATAAGTTGTATTTTTTGTTTCA
TTTTCCATCTTCTTCTTTTTCTTCTTTTTTTTTTTGTTGGTCTATGGGTG
CGTGACTTAAAAAAGGAGAGAGGAGTAAGAAGTAGAAAATATTAAGGGGA
AAAAAAGAATAAGATTTGATTTCTTACATCTTTAACATTTTGAAAATGAT
GTACATTTAATAATAATAAAAATAATAATACAAAAATTCATTCATTCATT
TATTCTACTTCGTCTTTTAAGATAGTAGAAGAATAGAAGAAGTGAGAAGG
GAGGGGGGGGGGGGGGGGGAAMTAATCATCTCTCTTTTCTATGTATGTAT
GTTATTATACTTATATTTGACTTATTAATATTATGCTCATTGAAGTGTGG
AAGAAAGGAGAAAAGCAAGAAAGAAAGAAGTGTGTGTAGTCAAACTTTAA
GAAAGTAGAATGAAATATAGTAGAAGCAATACGTATCTATGTGTCTGTCT
CCATCCAGAAAGTTCATGCAACAGGAGGCTTTATTCAATGGCCTTCACAG
GGGGAGGGAGGCCATTTGTAAACTTCTGCAAATTTACAAATCTATAGTTT
TTAAGGAAAAAAATTTAGTTCTTTGTTAGGGGATCTTGTATTTAAAAAAA
GAAATATCAGATATTCTTTTAACTAGTGGACCCTCAGAATATTGTGGGTT
CTCCAAACTATCTAGATCAGGGATGTCCAACCCGTACCCCGCAGGTCGTA
ATGCTGCCCACTTAATGCTTAAGTGTGACCCAATACTCGTTCACAATTCA
AGTTGTAATTTTGAGCTAAATTCTCACAATATCATCAAAACGCGTTGAAC
GCACAAACATTGAAAAATATTTCCCAAATAAAGGAATGTTTGAAAAATTA
TCCCTTGGAGGAAAAAGTTTTAATGAGAAAACCGAAAGAATTACTTTCAG
GATTTCTTTTCTAAAATATGTTCATTCGATCAAATTTTGCAGTGGAACAA
AAAATTTAATTTAAAAAATAATTACAATTGGCAATTACATAGCAATTGCA
GATATATTATGTCGATAGAGGAATCAGTAGAAAGCGAGAGTGATGGTGGG
GGTTGTGGTAAACGTATGGGGTTTGACGTTTAATTGAAGAAAGGCATTAT
CAGTTGCTGTTCTTGTTATTTGCCCTCTCATAATAATAAATAATATGTAC
TACATTGTACATTAGGGTGGGTTTTTTTTATTCCTTTTTTCGAATTTTGA
TTACGGCTAGTTCGAAAAAACTGTCAAGAGGTAAGAAAATAACCTATACA
AAATTTCACTTACCCTATGGAGCATAAAAATAGGATGAAATGGAAAAAAT
ATTATCTTTCCTTTCTGAAAATGTAACGAAAAGGATGCGTGCTATACGCG
GATCATCAAATTTTTTTAACTTTTTTCTCTTTTTTTTTCATATGATAATT
TCAGGAAAAAAAACTTCTACAACACTGTTTATAAGATAAAAAGATGTGAA
GGAAAATTATTTAACGCAAAATAGCTAAAAATGTTTTTTCAGTATCTATA
TTCACTAAGTAAAGAGTTTTTGCTTTTTTTCATAATTTGATCGACATGTG
CGACCTAAAAATGATTTTGTACGACAATGCAATTTTGTATAGGTAATTTT
CATACCATATGTCAACTTTTCCGACCCACCCGTAATCGAAATTCGAAAAA
AGTGGAAAATCAAACAGCTCTATTGTACACACATTATATTGTATAGAAAG
AAAGAAAGACAACTTTTTTAACTGCATACATATTTAGTTTTTAACCACCA
CTTCAAACTTGTCAATTTCCATTTTATTTTATTTTGTTTGATCTAAAAAC
AAAAAATAAAATCATAATTATTATGCATTATTATAATACGCTTCGAAATT
GACAAATCAATAAAACAGCAACAAAAAACTTTTTTATAAATTTTCTATCC
ATCTCTCTCCACCCCCCTCTCTCTCTCTCTCTTTCTTCTTTTTTGTTAGA
TTTACATACATACAAGTAATAATCGAGATACTTAGAAAATATTGACTTGT
ACCATACATACAGGGTGTCCACGATCAATTGGAACTATCTTAAAATTCAA
CCTGCTTGATAAATATGGAATTTGGAGTGTATTTGTTAATATGAAAAAGT
TAGACATGATATTAAACAATAAATTTATRCAACATMRCRRCCCRCASCAG
CCACCATCTTCTCCATCCTGCCCCTAAAGGATTTGCATGCCCTGATGACT
TCCGCGGAATCGACAGCATTCCACTCCCTCGTAATGGAGCCCTTCAGGGN
NNNNNNNNNNNNNNNNNNNNNNCCGCGATGCTCTTGTGGCTAMCMGYAGK
AAWMCCMCSGRTTGAGGKCGGGKGAGKTGGRGGGCCAGGKGTTGTGATCC
CAGAAAGTGATGTCGTGTGAGTTGAAGAGGTTAGTGGTCCTCATGGCGAT
GKGTGCGGGCGCTGAGTCTTGTTGGAATATGCACTACCTCCTAGCAGCCG
TATCCTTCATCCAGGGAATGACGAACTCCTCCATGACTTCGCAGTACCTT
ATCGTGTTAACCCTTTCCTTGAGATTGAAGCACCTCACCGGTGCTGCAGA
TGATACCCAGGGTCATCACGGAGGCCGGGAACTTTGTGGTGAAGACCGCA
GGGMCCTCTTCTCTCTCCTTGGTAAGCCACCTGTCATTCTGGACGTTGCA
GCTTCTGTCGACAGTCCAGTTCTTCTCGTCAGAGAAGAAAATGATTCTTC
CTCCATGGCTCTTCAGATCATTGAGGAGACGCTTACCGTTGGTGAGCCTA
GTGGCCTTCATGGATGCCGTGAGGATGTGCTGTTTGGCCATTCGGTATGG
CCTGTATCCGAGATCCTCATTCATAGCCTCGGAGACCAGCTGCTTGCTCA
CTCCACGGTTCTTGGCCAACCTGGACAAGGAAGTCCCCGGCAAAGCCTTG
ATAGACTTCCGGAGTCCTTCAAGGAAGGGGGGAGTGCGGATTCGGTCACT
TCTCATATTGTGGGCCTTGCGGCAGACCTTTCCCTCAAGCTCCCAGGCAT
TGAATACCCGGTACATCGYGGTCTTGGGGKAGTTAAGAAGCTTGTAGATA
GCRGAGGKCTTGTGYCCCGCGMAAGCCAATTCGAGGATGGTGTCTCTCCT
TGCTTGTTCCATGATGACTATTGTTTGTTGTCAAAATAATTGTGGTGGAA
GTTATAGTGTATTATTCATGCAACCTTTTATATTAGTATGATTTAACCTC
GAATATCCACATTATGGATCTGGATGAAGTTTAAAGTAGTTCCAACTTAT
CGTGGACACCCTGTACACTGGGGGTCCTCGCATAATGCGGTTTCAAACAC
CGCGGATTATACGCATAACGCAGTGTTTGGAATTATTCTTACTCCCCATA
TAGAGTGGGGTATATTCCCCTCATATTGCATTTTTTTATATTATTTATAT
TTTTGAGTTGGGGTAGTGGGATGTGTCCTATAAGTATATAATTTGATGCC
TAGGCTTAAAACTTTTGGTTATTACTAAATATACAAACTTTCACTTAAAA
AAGCGGTGAATAAATATTAGTTAAGTACCGATATTCTAAGTATTAAAATG
ACAGGATTACAAATCACCTCAATACTCAATCAATATTAAATTTTACGATT
ATTTTACAAGCATCTTGTCCTGCATACTTTATTTTAAATAACTAATGATG
AATAAAAAGTTTTTATTGCCTAACCTTACTTTTAAAAAAAGGAAAAATAG
TGAAAAGTAGATTTTGAAAAATAATTTCCCCCATTTTACGGGTTTTAGTT
CCAAAAAAATCCCCGCACATTGTAGATTTTTCTTGTTACCAAAAAACTGA
GATAAGTGGAGACCCCTTGTATTGTAGCATTACTCTACGGCAGTAGTTCT
CAAACTACTAATAGTGAGTAATATTATAAAGCAAGGTTTAAGTCCTTTTA
TTTGTTGGTCCCATTTTGGCATCAAATAGTTGACTATTTTCCTTAATTTT
ATGAAAAAATGTTTCAATTATTATAAAACTTGGTTGATTAGGCCCCATCA
ACATTGCTGACTTGAACGTGAAAATGAACGGCTTAGCAAAATATATGACG
TTTCTCCATATACTACTGAAGGGGAGATCGCGTGCAACGGTTCGAGAACA
ACTTCTCTAAGCTATGTATATAATATCTGGATATTTCAATTCTCAAATAT
TATAGAATTTTGTAAATAAGTCCCATAATTAAACAAAATATGTCGATGAA
AAATACCTTTTTTTTATAAAATATTTATTTTTTATTGACTTTTTTAGAAA
AGGCATATATTACAATGCTTGGAAATTTTTTCTGTTGTTAAATTTTCAAA
GTTTTTGGAAACAACTGCTTTTTCTTTTGTACAAAATATTACAAAATTTG
GTTACATTACATCAAATTTCCTGTTGATAAACTATTTTTGCGATTGGCAT
TTCCATGGTACGAGAGAAAGGGTCGCAAAGACTCTTCATAACGCAGTGGT
TCGTGTATATATTATGTATGTATAACTAGGAGGACGGGTGAAGGCACTCA
CTCTTCCTTCTTTCTTTTTATATTTCTTGAAATATCTTCACTTCAATGTG
TATGATGATTAATTATATATTATGAGTGGAAGTCTCATGAGATTAAACTA
TATAATAGTTAGTGGGGACTTATAATAATAGACGTATGGATTCAAATTTA
GTACTMCCACCACTCTCACCTTCTTGTTGATGGGTTAGTACTTAGTTGGA
CGATTGGTTGGTTAATTCTGCAAACATTCTTGATTCTATCCTTTTTTTTT
TTTAAACAAAAAAATTTCTTCTCACAACGCTATAGCTTATACATATGGTT
TTTTTTTTCCATTTTCAGTGATGTCGAAGGTGGTGGTGGTGGGGTTGGTG
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