EMLSAG00000000299, EMLSAG00000000299-683065 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000299 vs. GO
Match: - (symbol:CG5380 species:7227 "Drosophila melanogaster" [GO:0003899 "DNA-directed RNA polymerase activity" evidence=ISS;NAS] [GO:0005666 "DNA-directed RNA polymerase III complex" evidence=ISS] [GO:0006383 "transcription from RNA polymerase III promoter" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR007832 Pfam:PF05158 PIRSF:PIRSF028763 EMBL:AE014297 GO:GO:0005634 GO:GO:0022008 GO:GO:0003677 GO:GO:0006351 GO:GO:0003899 eggNOG:COG5111 KO:K03025 InterPro:IPR016049 PANTHER:PTHR12780 GeneTree:ENSGT00390000009679 OMA:MPCGICP OrthoDB:EOG7FV3R3 EMBL:AY119241 RefSeq:NP_001247237.1 RefSeq:NP_651029.1 UniGene:Dm.13730 ProteinModelPortal:Q9VD25 SMR:Q9VD25 BioGrid:67577 DIP:DIP-17810N IntAct:Q9VD25 MINT:MINT-299125 PRIDE:Q9VD25 EnsemblMetazoa:FBtr0084236 EnsemblMetazoa:FBtr0305320 GeneID:42619 KEGG:dme:Dmel_CG5380 UCSC:CG5380-RA FlyBase:FBgn0038951 InParanoid:Q9VD25 PhylomeDB:Q9VD25 GenomeRNAi:42619 NextBio:829724 PRO:PR:Q9VD25 Bgee:Q9VD25 Uniprot:Q9VD25) HSP 1 Score: 294.278 bits (752), Expect = 1.416e-96 Identity = 137/280 (48.93%), Postives = 196/280 (70.00%), Query Frame = 0 Query: 30 GISDKALQSLVPEIPNGDRAKAINDLLSSGKVQLFQSSQGILIKVKEAQDNXASNQASVKGGDAEEKIVFSIIQESGNKGTWIRDIRLKSNLIQTTLNKVLKSLETKKLIKAIKSVNATKKKVYMLYDLDPDVSVTGGAWYSNQDFETEFVEILNQQCFRYLYTKLEKSKDCPSGPVAGKHASCASSDDLLKYISELGISKISLKLNDIEMILDTLIYDGKIENVASEDSKKYYRATESLLPPTGLVRVPCGICPVIKDCKKSLGSINPKKCTYMKEWFE 309 G ++ L +P++P R +A+N LL G +++ + + ++ + K+ + A K D EEK+V+ I++E GNKG WIRDIR+KSNL LNK+LK+LETKKLIKA+KSVNA+KKKVYMLY+L+PD+S+TGGAWY +QDFE EFV++LNQQC R+L K + ++ GP+A K SC + +++ K+IS+LGISK++L D+E IL T++YDG E V +D YRA + LPPTGLV++PCGICPVIK+C + G + C YM++W + Sbjct: 19 GATNDDLTKALPDVPAATRVEALNILLQEGGIEILKKGEKLVYRAKDPE----KKSALPKDADNEEKVVYGIVEEGGNKGIWIRDIRMKSNLNMIQLNKILKNLETKKLIKAVKSVNASKKKVYMLYNLEPDLSITGGAWYQDQDFEVEFVDVLNQQCLRFLQMKRDSAEKKREGPLAFKQMSCCTVNEVQKFISDLGISKVNLAEADLETILKTVVYDGNAERVRQQDGSFVYRAVNAPLPPTGLVQMPCGICPVIKNC-SNCGDVTAITCEYMRDWLD 293
BLAST of EMLSAG00000000299 vs. GO
Match: - (symbol:W09C3.4 species:6239 "Caenorhabditis elegans" [GO:0000003 "reproduction" evidence=IMP] InterPro:IPR007832 Pfam:PF05158 PIRSF:PIRSF028763 GO:GO:0005634 GO:GO:0003677 GO:GO:0006351 GO:GO:0003899 eggNOG:COG5111 HOGENOM:HOG000231688 KO:K03025 InterPro:IPR016049 PANTHER:PTHR12780 EMBL:FO080504 PIR:T34460 RefSeq:NP_491427.1 UniGene:Cel.16572 ProteinModelPortal:P91529 SMR:P91529 IntAct:P91529 STRING:6239.W09C3.4 PaxDb:P91529 PRIDE:P91529 EnsemblMetazoa:W09C3.4 GeneID:172081 KEGG:cel:CELE_W09C3.4 UCSC:W09C3.4 CTD:172081 WormBase:W09C3.4 GeneTree:ENSGT00390000009679 InParanoid:P91529 OMA:MPCGICP OrthoDB:EOG7FV3R3 NextBio:873937 PRO:PR:P91529 Uniprot:P91529) HSP 1 Score: 190.274 bits (482), Expect = 3.374e-56 Identity = 114/308 (37.01%), Postives = 177/308 (57.47%), Query Frame = 0 Query: 3 SSVKTEKMTPAEVRDRILALTKSKGNEGISDKALQSLVPEIPNGDRAKAINDLLSSGKVQLFQSSQGIL-IKVKEAQDNXASNQASVKGGDAEEKIVFSIIQESGNKGTWIRDIRLKSNLIQTTLNKVLKSLETKKLIKAIKSVNATKKKVYMLYDLDPDVSVTGGAWYSNQDFETEFVEILNQQCFRYLYTKLEKSKD-CPSGPVAGKHASCASSDDLLKYISELGISKISLKLNDIEMILDTLIYDGKIENVASEDSKKYYRATESLLPPTGLVRVPCGICPVIKDCKKSLGSINPKKCTYMKEWF 308 +S+K E ++ AE +++ + ++ EGI AL S+ P +P R AIN LLSS K+ + Q+ G+L +KV N + G EE++++S+I+ES +G WI+++R S L Q L K LKSLETKKLIK IK+V T +K Y+L+ ++PD+S+TGG +YS+Q ++E + L C Y ++ + + D P+ + AS ++ ++I+E + + L L D+E IL+ + DG IE A D K S + P LV VPC ICPV++DC+ I+P+ C YMK W Sbjct: 2 ASIKEELISAAESESQVMQIVQA-ALEGIDMDALTSMTPGLPQTVRQTAINSLLSSKKLAIQQAPGGVLRLKV---------NTSEQIAGTEEEQVIYSLIEESKTRGIWIKELREGSGLNQLQLRKTLKSLETKKLIKTIKAVGTT-RKCYILFSIEPDMSLTGGTFYSDQQLDSELINTLISVCGSYAASRRKHAIDENPNNIQMQREASYIRPQEIAQFITEKRVLNVPLSLEDLERILEVAVLDGTIERRA--DGKIRACPPRSSISP--LVSVPCAICPVVEDCRPGY-VISPQSCDYMKNWL 293
BLAST of EMLSAG00000000299 vs. GO
Match: - (symbol:W09C3.4 "Probable DNA-directed RNA polymerase III subunit RPC6" species:6239 "Caenorhabditis elegans" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003899 "DNA-directed RNA polymerase activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005666 "DNA-directed RNA polymerase III complex" evidence=IBA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006383 "transcription from RNA polymerase III promoter" evidence=IBA] [GO:0001056 "RNA polymerase III activity" evidence=IBA] InterPro:IPR007832 Pfam:PF05158 PIRSF:PIRSF028763 GO:GO:0005634 GO:GO:0003677 GO:GO:0006351 GO:GO:0003899 eggNOG:COG5111 HOGENOM:HOG000231688 KO:K03025 InterPro:IPR016049 PANTHER:PTHR12780 EMBL:FO080504 PIR:T34460 RefSeq:NP_491427.1 UniGene:Cel.16572 ProteinModelPortal:P91529 SMR:P91529 IntAct:P91529 STRING:6239.W09C3.4 PaxDb:P91529 PRIDE:P91529 EnsemblMetazoa:W09C3.4 GeneID:172081 KEGG:cel:CELE_W09C3.4 UCSC:W09C3.4 CTD:172081 WormBase:W09C3.4 GeneTree:ENSGT00390000009679 InParanoid:P91529 OMA:MPCGICP OrthoDB:EOG7FV3R3 NextBio:873937 PRO:PR:P91529 Uniprot:P91529) HSP 1 Score: 190.274 bits (482), Expect = 3.374e-56 Identity = 114/308 (37.01%), Postives = 177/308 (57.47%), Query Frame = 0 Query: 3 SSVKTEKMTPAEVRDRILALTKSKGNEGISDKALQSLVPEIPNGDRAKAINDLLSSGKVQLFQSSQGIL-IKVKEAQDNXASNQASVKGGDAEEKIVFSIIQESGNKGTWIRDIRLKSNLIQTTLNKVLKSLETKKLIKAIKSVNATKKKVYMLYDLDPDVSVTGGAWYSNQDFETEFVEILNQQCFRYLYTKLEKSKD-CPSGPVAGKHASCASSDDLLKYISELGISKISLKLNDIEMILDTLIYDGKIENVASEDSKKYYRATESLLPPTGLVRVPCGICPVIKDCKKSLGSINPKKCTYMKEWF 308 +S+K E ++ AE +++ + ++ EGI AL S+ P +P R AIN LLSS K+ + Q+ G+L +KV N + G EE++++S+I+ES +G WI+++R S L Q L K LKSLETKKLIK IK+V T +K Y+L+ ++PD+S+TGG +YS+Q ++E + L C Y ++ + + D P+ + AS ++ ++I+E + + L L D+E IL+ + DG IE A D K S + P LV VPC ICPV++DC+ I+P+ C YMK W Sbjct: 2 ASIKEELISAAESESQVMQIVQA-ALEGIDMDALTSMTPGLPQTVRQTAINSLLSSKKLAIQQAPGGVLRLKV---------NTSEQIAGTEEEQVIYSLIEESKTRGIWIKELREGSGLNQLQLRKTLKSLETKKLIKTIKAVGTT-RKCYILFSIEPDMSLTGGTFYSDQQLDSELINTLISVCGSYAASRRKHAIDENPNNIQMQREASYIRPQEIAQFITEKRVLNVPLSLEDLERILEVAVLDGTIERRA--DGKIRACPPRSSISP--LVSVPCAICPVVEDCRPGY-VISPQSCDYMKNWL 293
BLAST of EMLSAG00000000299 vs. GO
Match: - (symbol:rpc34 "DNA-directed RNA polymerase III complex subunit Rpc34 (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005666 "DNA-directed RNA polymerase III complex" evidence=ISO] [GO:0003899 "DNA-directed RNA polymerase activity" evidence=ISO] [GO:0006383 "transcription from RNA polymerase III promoter" evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR007832 Pfam:PF05158 PIRSF:PIRSF028763 PomBase:SPCC290.02 GO:GO:0005829 EMBL:CU329672 GO:GO:0003677 GO:GO:0006383 GO:GO:0005666 GO:GO:0003899 eggNOG:COG5111 KO:K03025 InterPro:IPR016049 PANTHER:PTHR12780 OMA:MVQRNSS EMBL:DQ156223 PIR:T41266 RefSeq:NP_588398.1 ProteinModelPortal:O94553 BioGrid:275566 MINT:MINT-4685169 STRING:4896.SPCC290.02-1 EnsemblFungi:SPCC290.02.1 GeneID:2538992 KEGG:spo:SPCC290.02 HOGENOM:HOG000186563 OrthoDB:EOG7TN03Q NextBio:20800167 PRO:PR:O94553 Uniprot:O94553) HSP 1 Score: 152.525 bits (384), Expect = 8.788e-42 Identity = 86/266 (32.33%), Postives = 150/266 (56.39%), Query Frame = 0 Query: 46 GDRAKAINDLLSSGKVQLFQSSQGILIKVKEAQDNXASNQASVKGGDAEEKIVFSIIQESGNKGTWIRDIRLKSNLIQTTLNKVLKSLETKKLIKAIKSVNATKKKVYMLYDLDPDVSVTGGAWYSNQDFETEFVEILNQQCFRYLYTKLEKSKDCPSGP--VAG-KHASCASSDDLLKYISELGISKISLKLNDIEMILDTLIYDGKIENVASEDSKKYYRATESLLPPTGLVRVPCGICPVIKDCKKSLGSINPKKCTYMKEWF 308 D + A+N LLS + + QG ++ + + + A ++++G +E+IV+S I+ SGN+G W + + L++NL + +++ LKSLE+K L+K+IKSV +K+YMLYDL P +TGG W+++Q+ + EF+E L + +RY+++K K GP V G ++ ++ + ++ I+K+ L L ++ ++D LIYDGK+E + S + R + PCG CPV C + +NP C Y+ +W Sbjct: 43 NDLSSALNILLSRRLLDPLR--QGNVLVYRAVRLDEAKTVSTMEG---DEQIVYSFIKNSGNEGIWRKTLTLRTNLHVSVVDRCLKSLESKNLVKSIKSVKNPTRKIYMLYDLVPSTELTGGPWFTDQELDVEFIENLKKVIYRYVHSKSFPPKKAAMGPDLVWGPEYNGYPTALQIHNWLRSTNITKVDLSLANVISLVDVLIYDGKVEKRSDGASYRAIRVNNENI--DAFTESPCGNCPVSDICDAN-SRVNPITCEYLDKWL 300
BLAST of EMLSAG00000000299 vs. GO
Match: - (symbol:rpc34 "RNA polymerase III subunit" species:44689 "Dictyostelium discoideum" [GO:0044351 "macropinocytosis" evidence=RCA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003899 "DNA-directed RNA polymerase activity" evidence=IEA;ISS] [GO:0001056 "RNA polymerase III activity" evidence=IBA] [GO:0005666 "DNA-directed RNA polymerase III complex" evidence=ISS;IBA] [GO:0006383 "transcription from RNA polymerase III promoter" evidence=ISS] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR007832 Pfam:PF05158 PIRSF:PIRSF028763 dictyBase:DDB_G0272022 GO:GO:0003677 EMBL:AAFI02000007 GO:GO:0006383 GO:GO:0005666 GO:GO:0003899 eggNOG:COG5111 KO:K03025 InterPro:IPR016049 PANTHER:PTHR12780 RefSeq:XP_645385.1 ProteinModelPortal:Q86JM3 STRING:44689.DDB_0216315 PRIDE:Q86JM3 EnsemblProtists:DDB0216315 GeneID:8618274 KEGG:ddi:DDB_G0272022 OMA:MVQRNSS ProtClustDB:CLSZ2729252 PRO:PR:Q86JM3 Uniprot:Q86JM3) HSP 1 Score: 145.591 bits (366), Expect = 2.312e-39 Identity = 82/269 (30.48%), Postives = 146/269 (54.28%), Query Frame = 0 Query: 49 AKAINDLLSSGKVQLFQSSQGILIKVKEAQDNXASNQASVKGGDAEEKIVFSIIQESGNKGTWIRDIRLKSNLIQTTLNKVLKSLETKKLIKAIKSVNATKKKVYMLYDLDPDVSVTGGAWYSNQDFETEFVEILNQQCFRYLYTKLEKSKDCPSGPVAGKHASCASSDDLLKYISELGISKISLKLNDIEMILDTLIYDGKIENVA--------SEDSKKYYRATESLLPPTGLVRVPCGICPVIKDCKKSLGSINPKKCTYMKEWFE 309 K IN+L+ G++ L Q+S + ++ +QA +G E+ +++ +I+ S N G W R+++ S Q + K+LK+LE++KLIK++KS+ + +KKVYMLY+++P +TGG YS+Q ++ ++++I+ ++ K G V A L+ ++E S+ SL DI+ +++T+IYDG IE + S Y+ T++ +P +PCG CPV C + G ++PK+C Y K++ E Sbjct: 37 VKVINNLIKQGRLMLIQNSD----ETTSYKEVNPEDQAKFRGLGVEDFLIYQLIEASSNTGAWTRELKNSSGYQQVQITKILKTLESRKLIKSVKSIQSGRKKVYMLYNMEPSREITGGQLYSDQSYDHQYIQIMKMHIKTFVDNK---------GAV-----DLADIITYLRKVAEEATSQ-SLGPEDIQALVNTVIYDGDIEEMRDTRMGAMLGRRSGILYKPTKTPIPVNNFCNMPCGNCPVFDICSDN-GLVSPKRCVYFKQYLE 285
BLAST of EMLSAG00000000299 vs. GO
Match: - (symbol:orf19.5608 species:5476 "Candida albicans" [GO:0001056 "RNA polymerase III activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005666 "DNA-directed RNA polymerase III complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0042797 "tRNA transcription from RNA polymerase III promoter" evidence=IEA] InterPro:IPR007832 Pfam:PF05158 PIRSF:PIRSF028763 CGD:CAL0000539 GO:GO:0003677 GO:GO:0006351 EMBL:AACQ01000034 EMBL:AACQ01000033 GO:GO:0003899 eggNOG:COG5111 KO:K03025 InterPro:IPR016049 PANTHER:PTHR12780 OrthoDB:EOG7TN03Q RefSeq:XP_719169.1 RefSeq:XP_719283.1 ProteinModelPortal:Q5ABU2 STRING:5476.CAL0000539 GeneID:3639054 GeneID:3639178 KEGG:cal:CaO19.13051 KEGG:cal:CaO19.5608 Uniprot:Q5ABU2) HSP 1 Score: 128.257 bits (321), Expect = 1.295e-32 Identity = 65/182 (35.71%), Postives = 112/182 (61.54%), Query Frame = 0 Query: 94 EEKIVFSIIQESGNKGTWIRDIRLKSNLIQTTLNKVLKSLETKKLIKAIKSVNATKKKVYMLYDLDPDVSVTGGAWYSNQDFETEFVEILNQQCFRY-----LYTKLEKSKDCPSGPVA---GKHASCASSDDLLKYISELGISKISLKLNDIEMILDTLIYDGKIENV-ASEDSKKYYRAT 266 +E +++S I+ SG +G W + I+ K+NL Q + K LK+LE + IK+IKSV +K+YMLY+L P + VTGG W+++ + +TEF+E L + C+R+ +Y K E++ + P+ H + D L+++I+ I+ + L +NDI + D LIYD +IE V ++++ ++AT Sbjct: 84 DEAMIYSYIEASGREGIWTKTIKAKTNLHQHIVQKCLKNLENNRYIKSIKSVKHPTRKIYMLYNLQPSIDVTGGPWFTDSELDTEFIETLLEVCWRFIVGKTMYIKDEEADNEDINPLQTTYHNHHPGVNLDQLVEFINNSNITSVELGINDIRSLCDVLIYDDRIEEVGGNQENSGIFKAT 265
BLAST of EMLSAG00000000299 vs. GO
Match: - (symbol:CPAR2_601500 species:5480 "Candida parapsilosis" [GO:0042797 "tRNA transcription from RNA polymerase III promoter" evidence=IEA] [GO:0001056 "RNA polymerase III activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005666 "DNA-directed RNA polymerase III complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR007832 Pfam:PF05158 PIRSF:PIRSF028763 GO:GO:0003677 GO:GO:0006351 GO:GO:0003899 InterPro:IPR016049 PANTHER:PTHR12780 OrthoDB:EOG7TN03Q EMBL:HE605202 Uniprot:G8B538) HSP 1 Score: 124.79 bits (312), Expect = 1.821e-31 Identity = 66/190 (34.74%), Postives = 111/190 (58.42%), Query Frame = 0 Query: 94 EEKIVFSIIQESGNKGTWIRDIRLKSNLIQTTLNKVLKSLETKKLIKAIKSVNATKKKVYMLYDLDPDVSVTGGAWYSNQDFETEFVEILNQQCFRYLYTKLEKSKDCPSGPVAGKHASCASS------DDLLKYISELGISKISLKLNDIEMILDTLIYDGKIENVASEDSKKYYRATESLLPPTGLVR 277 +E++++S I+ S +G W + ++ K+NL Q ++K LK+LE ++ IK+IKSV +K+YMLY L P + VTGG W+++ + +TEF++ + + +R++ K D V AS +S D +L +I+ G+S + L+LNDI + D L +D K+E + E ++AT L GLVR Sbjct: 82 DERMIYSYIEASQREGIWTKTLKAKTNLHQHIVSKCLKNLEHQRYIKSIKSVKHPTRKIYMLYHLQPSIDVTGGPWFTDSELDTEFIDTILEVVWRFIVNKTFPRGDDEQHSVNPLQASYIASFQGVDLDQILAFINGSGVSSVELELNDIRSLCDVLKFDDKVEEI--EGHSGLFKATRQSLVEKGLVR 269
BLAST of EMLSAG00000000299 vs. GO
Match: - (symbol:CAGL0M03487g species:5478 "Candida glabrata" [GO:0003677 "DNA binding" evidence=IEA] [GO:0042797 "tRNA transcription from RNA polymerase III promoter" evidence=IEA] [GO:0001056 "RNA polymerase III activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005666 "DNA-directed RNA polymerase III complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR007832 Pfam:PF05158 PIRSF:PIRSF028763 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 EMBL:CR380959 GO:GO:0003899 KO:K03025 InterPro:IPR016049 PANTHER:PTHR12780 HOGENOM:HOG000186563 OrthoDB:EOG7TN03Q OMA:SGREGIW RefSeq:XP_449498.1 ProteinModelPortal:Q6FJU6 GeneID:2891507 KEGG:cgr:CAGL0M03487g Uniprot:Q6FJU6) HSP 1 Score: 114.39 bits (285), Expect = 1.008e-27 Identity = 62/185 (33.51%), Postives = 107/185 (57.84%), Query Frame = 0 Query: 93 AEEKIVFSIIQESGNKGTWIRDIRLKSNLIQTTLNKVLKSLETKKLIKAIKSVNATKKKVYMLYDLDPDVSVTGGAWYSNQDFETEFVEILNQQCFRYL--------YTKLEK-SKDCPSGPVAGKHASCASSDDLLKYISELGISKISLKLNDIEMILDTLIYDGKIENVASEDSKKYYRATES 268 AEE +V+S I+ SG +G W + I+ ++NL Q + K LKSLE+++ +K++KSV +K+YMLY L P + VTGG W+++ + + EF+ L +R++ ++ + S+ P G C S +D+L++I + ++ + L L DI + + L+YD K+E V + +YR T S Sbjct: 88 AEEALVYSYIESSGREGIWSKTIKARTNLHQHVVLKCLKSLESQRYVKSVKSVKHPTRKIYMLYHLQPSIEVTGGPWFTDSELDVEFINSLLTIVWRFVSECTYPGGFSNFQNGSQGALYAP--GIKNYC-SLEDILQFIEQAQVANVQLNLGDIRSLCEVLVYDDKLERVLHD----HYRVTLS 265
BLAST of EMLSAG00000000299 vs. GO
Match: - (symbol:AO090038000563 "RNA polymerase III" species:510516 "Aspergillus oryzae RIB40" [GO:0008150 "biological_process" evidence=ND] InterPro:IPR007832 Pfam:PF05158 PIRSF:PIRSF028763 EMBL:AP007169 GO:GO:0003677 GO:GO:0006351 GO:GO:0003899 KO:K03025 InterPro:IPR016049 PANTHER:PTHR12780 OMA:MVQRNSS HOGENOM:HOG000186563 OrthoDB:EOG7TN03Q RefSeq:XP_001825464.1 ProteinModelPortal:Q2U284 STRING:5062.CADAORAP00009128 EnsemblFungi:CADAORAT00009315 GeneID:5997559 KEGG:aor:AOR_1_952074 Uniprot:Q2U284) HSP 1 Score: 109.768 bits (273), Expect = 6.003e-26 Identity = 72/262 (27.48%), Postives = 115/262 (43.89%), Query Frame = 0 Query: 94 EEKIVFSIIQESGNKGTWIRDIRLKSNLIQTTLNKVLKSLETKKLIKAIKSVNATKKKVYMLYDLDPDVSVTGGAWYSNQDFETEF-----------------VEILNQQCFRYLYTKLEKSKDCPSG-----------PVAGKHASCASSDDLLKYISELGISKISLKLNDIEMILDTLIYDGKIENVASEDSKKYYRATESL------------------LPPTGLVRVPCGICPVIKDCKKSLGSINPKKCTYMKEWFE 309 +E +V+++I +G G W+R I ++ L ++ L++ LKSLE K IK++ +V +K+YML L P VTGGAW+++ + F VE+ + R TK K+ D P + + L ++E GI+ + L I +LD L YDGK+ + S + K + E++ L G+ PCG CPV K C G+++P+ C Y W E Sbjct: 93 DESLVYNVIHSTGRNGIWVRAIGTRTGLHKSILDRCLKSLEGKNYIKSVHNVKFPSRKMYMLAGLAPSEDVTGGAWFTDGVLDENFINTVAGYIEYTVSRKSWVEVPSADAHR---TKRIKTSDGSVSVKQEAGQKTFIPFPAGYRGYPTVSMLTDAVNESGITPVRLGEESITQLLDMLCYDGKLVALNSGEMYKSVKNPEAVKQSQARKPAGEDKGIDDRLVTNGMTEAPCGTCPVFKLCAPG-GAVSPESCEYFDPWLE 350
BLAST of EMLSAG00000000299 vs. GO
Match: - (symbol:AO090038000563 species:5062 "Aspergillus oryzae" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] InterPro:IPR007832 Pfam:PF05158 PIRSF:PIRSF028763 EMBL:AP007169 GO:GO:0003677 GO:GO:0006351 GO:GO:0003899 KO:K03025 InterPro:IPR016049 PANTHER:PTHR12780 OMA:MVQRNSS HOGENOM:HOG000186563 OrthoDB:EOG7TN03Q RefSeq:XP_001825464.1 ProteinModelPortal:Q2U284 STRING:5062.CADAORAP00009128 EnsemblFungi:CADAORAT00009315 GeneID:5997559 KEGG:aor:AOR_1_952074 Uniprot:Q2U284) HSP 1 Score: 109.768 bits (273), Expect = 6.003e-26 Identity = 72/262 (27.48%), Postives = 115/262 (43.89%), Query Frame = 0 Query: 94 EEKIVFSIIQESGNKGTWIRDIRLKSNLIQTTLNKVLKSLETKKLIKAIKSVNATKKKVYMLYDLDPDVSVTGGAWYSNQDFETEF-----------------VEILNQQCFRYLYTKLEKSKDCPSG-----------PVAGKHASCASSDDLLKYISELGISKISLKLNDIEMILDTLIYDGKIENVASEDSKKYYRATESL------------------LPPTGLVRVPCGICPVIKDCKKSLGSINPKKCTYMKEWFE 309 +E +V+++I +G G W+R I ++ L ++ L++ LKSLE K IK++ +V +K+YML L P VTGGAW+++ + F VE+ + R TK K+ D P + + L ++E GI+ + L I +LD L YDGK+ + S + K + E++ L G+ PCG CPV K C G+++P+ C Y W E Sbjct: 93 DESLVYNVIHSTGRNGIWVRAIGTRTGLHKSILDRCLKSLEGKNYIKSVHNVKFPSRKMYMLAGLAPSEDVTGGAWFTDGVLDENFINTVAGYIEYTVSRKSWVEVPSADAHR---TKRIKTSDGSVSVKQEAGQKTFIPFPAGYRGYPTVSMLTDAVNESGITPVRLGEESITQLLDMLCYDGKLVALNSGEMYKSVKNPEAVKQSQARKPAGEDKGIDDRLVTNGMTEAPCGTCPVFKLCAPG-GAVSPESCEYFDPWLE 350
BLAST of EMLSAG00000000299 vs. C. finmarchicus
Match: gi|592941265|gb|GAXK01017288.1| (TSA: Calanus finmarchicus comp73087_c0_seq1 transcribed RNA sequence) HSP 1 Score: 317.39 bits (812), Expect = 1.767e-105 Identity = 156/282 (55.32%), Postives = 207/282 (73.40%), Query Frame = 0 Query: 29 EGISDKALQSLVPEIPNGDRAKAINDLLSSGKVQLFQSSQG-ILIKVKEAQDNXASNQASVKGGDAEEKIVFSIIQESGNKGTWIRDIRLKSNLIQTTLNKVLKSLETKKLIKAIKSVNATKKKVYMLYDLDPDVSVTGGAWYSNQDFETEFVEILNQQCFRYLYTKLEKSKDCPSGPVAGKHASCASSDDLLKYISELGISKISLKLNDIEMILDTLIYDGKIENVASEDSKKYYRATESLLPPTGLVRVPCGICPVIKDCKKSLGSINPKKCTYMKEWFE 309 +G+ DK L + +P + RA+AIN LL K+ L++ S G +L ++K + ++A+ GD EEKIVF II+ +GN G+WIRDIR KSNL QT L KVLKSLE K+LIKA+KSVNA KKKVYMLY+LDPD SVTGGAWYS+QDFE+EFVEILNQQC+R+LY KLE+S+ +GP+A K++S S+ D+ K+I++LGISK++LK DIE IL+T+++DGK E +S YRA E LLP GL R PCG+CPVI+ C + G+I P+ C Y ++W E Sbjct: 38 QGVGDKVLIANMPYVDPKVRAQAINKLLVGEKIDLYKGSDGGLLYRLK------SPSKAATISGDQEEKIVFRIIENAGNLGSWIRDIRGKSNLGQTQLTKVLKSLEAKRLIKAVKSVNANKKKVYMLYNLDPDHSVTGGAWYSDQDFESEFVEILNQQCYRFLYHKLEQSQASSAGPIAAKNSSMVSTKDVAKFITDLGISKVALKTEDIEAILNTIVFDGKAERCEGGESGSLYRAVEPLLPSAGLARSPCGVCPVIRRCGEK-GNIRPETCDYFRDWLE 862
BLAST of EMLSAG00000000299 vs. C. finmarchicus
Match: gi|592954453|gb|GAXK01004100.1| (TSA: Calanus finmarchicus comp255931_c0_seq3 transcribed RNA sequence) HSP 1 Score: 33.113 bits (74), Expect = 1.229e+0 Identity = 19/59 (32.20%), Postives = 31/59 (52.54%), Query Frame = 0 Query: 252 ENVASEDSKKYYRATESLLPPTGLVRVPCGICPVIKDCKKSLGSINP-KKCTYMKEWFE 309 E++ E+ K+ R ES PPTG R+P I P K ++ +++P +KC E + Sbjct: 187 EDIGIEEEKRRGRRQESQQPPTGRQRMPSRIAP--KTERRREPTVSPSRKCHQSGERMQ 357
BLAST of EMLSAG00000000299 vs. C. finmarchicus
Match: gi|592769963|gb|GAXK01184605.1| (TSA: Calanus finmarchicus comp134279_c0_seq1 transcribed RNA sequence) HSP 1 Score: 31.9574 bits (71), Expect = 2.791e+0 Identity = 38/137 (27.74%), Postives = 60/137 (43.80%), Query Frame = 0 Query: 130 LKSLETKKLIKAIKSVNATKKKVYM-LYDLDPDVSVTGGAWYSNQDFETEFVEILNQQCFRYLYTKLEKSKDCPSGPVAGKH---ASCASSDDLLKYISELGISKISLKLNDIEMILDTLIYDGKIENVASEDSKKY 262 L E +L KA+++ N VY+ L D+ + +W N+D E IL + C RYLYT EK ++ VA H SC + L S G++ N ++++ Y ++E E+S Y Sbjct: 448 LSGTERAQLEKALETEN-----VYLELLDV-----IKTSSWVGNKDVEPVMKTILTRLCARYLYT--EKRRNNALNSVANFHLRNGSCLWRINWLADPSPRGMT------NSCGLMVNYRYYLDRLE----ENSNNY 792
BLAST of EMLSAG00000000299 vs. C. finmarchicus
Match: gi|592814832|gb|GAXK01139736.1| (TSA: Calanus finmarchicus comp529527_c0_seq1 transcribed RNA sequence) HSP 1 Score: 31.187 bits (69), Expect = 3.269e+0 Identity = 18/60 (30.00%), Postives = 35/60 (58.33%), Query Frame = 0 Query: 99 FSIIQESGNKGTWIRDIRLKSNLIQT------TLNKVLKSLETKKLIKAIKSVNATKKKV 152 FSI+Q N+ W+R+I + NL++ T +LK++ T+KL+ ++ N + ++V Sbjct: 138 FSILQ*Y*NRT*WVRNIEAQQNLLEVY*DY*ITSKHILKTVGTQKLLLIMRKRNLSGRQV 317
BLAST of EMLSAG00000000299 vs. C. finmarchicus
Match: gi|592833964|gb|GAXK01123580.1| (TSA: Calanus finmarchicus comp5083597_c0_seq1 transcribed RNA sequence) HSP 1 Score: 30.8018 bits (68), Expect = 6.061e+0 Identity = 17/47 (36.17%), Postives = 24/47 (51.06%), Query Frame = 0 Query: 235 LNDIEMILDTL-IYDGKIENVASEDSKKYYRATESLLPPTGLVRVPC 280 LND++ + +L D EN A K+YRA +LLPP + C Sbjct: 228 LNDVKNLQASLKCKDFDFENHAVSSRSKFYRAKNNLLPPAKEIVEKC 368
BLAST of EMLSAG00000000299 vs. C. finmarchicus
Match: gi|592878250|gb|GAXK01079651.1| (TSA: Calanus finmarchicus comp5960256_c0_seq1 transcribed RNA sequence) HSP 1 Score: 30.0314 bits (66), Expect = 6.201e+0 Identity = 17/37 (45.95%), Postives = 23/37 (62.16%), Query Frame = 0 Query: 210 HASCASSDDLLKYISELGISKISLKLNDIEMILDTLI 246 H S S D L+ ELGI+ +SL +ND I++TLI Sbjct: 110 HISFPSKDILVNMTMELGITNLSLAMND---IIETLI 211
BLAST of EMLSAG00000000299 vs. L. salmonis peptides
Match: EMLSAP00000000299 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1044:32287:33278:-1 gene:EMLSAG00000000299 transcript:EMLSAT00000000299 description:"maker-LSalAtl2s1044-augustus-gene-0.35") HSP 1 Score: 626.32 bits (1614), Expect = 0.000e+0 Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 0 Query: 1 MDSSVKTEKMTPAEVRDRILALTKSKGNEGISDKALQSLVPEIPNGDRAKAINDLLSSGKVQLFQSSQGILIKVKEAQDNXASNQASVKGGDAEEKIVFSIIQESGNKGTWIRDIRLKSNLIQTTLNKVLKSLETKKLIKAIKSVNATKKKVYMLYDLDPDVSVTGGAWYSNQDFETEFVEILNQQCFRYLYTKLEKSKDCPSGPVAGKHASCASSDDLLKYISELGISKISLKLNDIEMILDTLIYDGKIENVASEDSKKYYRATESLLPPTGLVRVPCGICPVIKDCKKSLGSINPKKCTYMKEWFEI 310 MDSSVKTEKMTPAEVRDRILALTKSKGNEGISDKALQSLVPEIPNGDRAKAINDLLSSGKVQLFQSSQGILIKVKEAQDNXASNQASVKGGDAEEKIVFSIIQESGNKGTWIRDIRLKSNLIQTTLNKVLKSLETKKLIKAIKSVNATKKKVYMLYDLDPDVSVTGGAWYSNQDFETEFVEILNQQCFRYLYTKLEKSKDCPSGPVAGKHASCASSDDLLKYISELGISKISLKLNDIEMILDTLIYDGKIENVASEDSKKYYRATESLLPPTGLVRVPCGICPVIKDCKKSLGSINPKKCTYMKEWFEI Sbjct: 1 MDSSVKTEKMTPAEVRDRILALTKSKGNEGISDKALQSLVPEIPNGDRAKAINDLLSSGKVQLFQSSQGILIKVKEAQDNXASNQASVKGGDAEEKIVFSIIQESGNKGTWIRDIRLKSNLIQTTLNKVLKSLETKKLIKAIKSVNATKKKVYMLYDLDPDVSVTGGAWYSNQDFETEFVEILNQQCFRYLYTKLEKSKDCPSGPVAGKHASCASSDDLLKYISELGISKISLKLNDIEMILDTLIYDGKIENVASEDSKKYYRATESLLPPTGLVRVPCGICPVIKDCKKSLGSINPKKCTYMKEWFEI 310
BLAST of EMLSAG00000000299 vs. SwissProt
Match: gi|20139517|sp|Q921X6.1|RPC6_MOUSE (RecName: Full=DNA-directed RNA polymerase III subunit RPC6; Short=RNA polymerase III subunit C6; AltName: Full=DNA-directed RNA polymerase III subunit F) HSP 1 Score: 326.25 bits (835), Expect = 1.674e-110 Identity = 162/309 (52.43%), Postives = 218/309 (70.55%), Query Frame = 0 Query: 12 PAEVRDRILALTKSKGNEGISDKALQSLVPEIPNGDRAKAINDLLSSGKVQLFQSSQGILIKVKEAQDNXASNQASVKGGDAEEKIVFSIIQESGNKGTWIRDIRLKSNLIQTTLNKVLKSLETKKLIKAIKSVNATKKKVYMLYDLDPDVSVTGGAWYSNQDFETEFVEILNQQCFRYLYTKLEKSKDCPSGPVAGKHASCASSDDLLKYISELGISKISLKLNDIEMILDTLIYDGKIE---------NVASEDSK-KYYRATESLLPPTGLVRVPCGICPVIKDCKKSLGSINPKKCTYMKEWFEI 310 P E+ +RI+ L + GI+D+ +Q+ +P I RA AIN LLS G++ L +S+ G+L ++K++Q N +KG D +EK+V+ II+++GNKG W RDIR KSNL T +NK+LK+LE+KKLIKA+KSV A+KKKVYMLY+L PD SVTGGAWYS+QDFE+EFVE+LNQQCF++L +K E +++ PV +++S ASS ++ KYI ELGISK+ L + DIE IL+TLIYDGK+E V S D K YRA +LPPTG+VR PCG+CPV +DC + G I+P C YM EW E Sbjct: 15 PVEIENRIIELCH-QFPHGITDQVIQNEMPHIEAQQRAVAINRLLSMGQLDLLRSNTGLLYRIKDSQ-----NAGKMKGSDNQEKLVYQIIEDAGNKGIWSRDIRYKSNLPLTEINKILKNLESKKLIKAVKSVAASKKKVYMLYNLQPDRSVTGGAWYSDQDFESEFVEVLNQQCFKFLQSKAETARESKQNPVIQRNSSFASSHEVWKYICELGISKVELSMEDIETILNTLIYDGKVEMTIIAAKEGTVGSVDGHMKLYRAVNPILPPTGVVRAPCGLCPVFEDCHEG-GEISPSNCIYMTEWLEF 316
BLAST of EMLSAG00000000299 vs. SwissProt
Match: gi|20139728|sp|Q9H1D9.1|RPC6_HUMAN (RecName: Full=DNA-directed RNA polymerase III subunit RPC6; Short=RNA polymerase III subunit C6; AltName: Full=DNA-directed RNA polymerase III subunit F; AltName: Full=RNA polymerase III 39 kDa subunit; Short=RPC39) HSP 1 Score: 324.324 bits (830), Expect = 6.912e-110 Identity = 161/309 (52.10%), Postives = 217/309 (70.23%), Query Frame = 0 Query: 12 PAEVRDRILALTKSKGNEGISDKALQSLVPEIPNGDRAKAINDLLSSGKVQLFQSSQGILIKVKEAQDNXASNQASVKGGDAEEKIVFSIIQESGNKGTWIRDIRLKSNLIQTTLNKVLKSLETKKLIKAIKSVNATKKKVYMLYDLDPDVSVTGGAWYSNQDFETEFVEILNQQCFRYLYTKLEKSKDCPSGPVAGKHASCASSDDLLKYISELGISKISLKLNDIEMILDTLIYDGKIE---------NVASEDSK-KYYRATESLLPPTGLVRVPCGICPVIKDCKKSLGSINPKKCTYMKEWFEI 310 P E+ +RI+ L + GI+D+ +Q+ +P I RA AIN LLS G++ L +S+ G+L ++K++Q N +KG D +EK+V+ II+++GNKG W RDIR KSNL T +NK+LK+LE+KKLIKA+KSV A+KKKVYMLY+L PD SVTGGAWYS+QDFE+EFVE+LNQQCF++L +K E +++ P+ +++S ASS ++ KYI ELGISK+ L + DIE IL+TLIYDGK+E V S D K YRA ++PPTGLVR PCG+CPV DC + G I+P C YM EW E Sbjct: 15 PVEIENRIIELCH-QFPHGITDQVIQNEMPHIEAQQRAVAINRLLSMGQLDLLRSNTGLLYRIKDSQ-----NAGKMKGSDNQEKLVYQIIEDAGNKGIWSRDIRYKSNLPLTEINKILKNLESKKLIKAVKSVAASKKKVYMLYNLQPDRSVTGGAWYSDQDFESEFVEVLNQQCFKFLQSKAETARESKQNPMIQRNSSFASSHEVWKYICELGISKVELSMEDIETILNTLIYDGKVEMTIIAAKEGTVGSVDGHMKLYRAVNPIIPPTGLVRAPCGLCPVFDDCHEG-GEISPSNCIYMTEWLEF 316
BLAST of EMLSAG00000000299 vs. SwissProt
Match: gi|110816413|sp|Q2T9S3.1|RPC6_BOVIN (RecName: Full=DNA-directed RNA polymerase III subunit RPC6; Short=RNA polymerase III subunit C6; AltName: Full=DNA-directed RNA polymerase III subunit F) HSP 1 Score: 323.939 bits (829), Expect = 1.129e-109 Identity = 161/309 (52.10%), Postives = 216/309 (69.90%), Query Frame = 0 Query: 12 PAEVRDRILALTKSKGNEGISDKALQSLVPEIPNGDRAKAINDLLSSGKVQLFQSSQGILIKVKEAQDNXASNQASVKGGDAEEKIVFSIIQESGNKGTWIRDIRLKSNLIQTTLNKVLKSLETKKLIKAIKSVNATKKKVYMLYDLDPDVSVTGGAWYSNQDFETEFVEILNQQCFRYLYTKLEKSKDCPSGPVAGKHASCASSDDLLKYISELGISKISLKLNDIEMILDTLIYDGKIE---------NVASEDSK-KYYRATESLLPPTGLVRVPCGICPVIKDCKKSLGSINPKKCTYMKEWFEI 310 P E+ +RI+ L + GI+D+ +Q+ +P I RA AIN LLS G++ L +S+ G+L ++K++Q N +KG D +EK+V+ II+++GNKG W RDIR KSNL T +NK+LK+LE+KKLIKA+KSV A+KKKVYMLY+L PD SVTGGAWYS+QDFE+EFVE+LNQQCF++L K E +++ P+ +++S ASS ++ KYI ELGISK+ L + DIE IL+TLIYDGK+E V S D K YRA ++PPTGLVR PCG+CPV DC + G I+P C YM EW E Sbjct: 15 PVEIENRIIELCH-QFPHGITDQVIQNEMPHIEAQQRAVAINRLLSMGQLDLLRSNTGLLYRIKDSQ-----NAGKMKGSDNQEKLVYQIIEDAGNKGIWSRDIRYKSNLPLTEINKILKNLESKKLIKAVKSVAASKKKVYMLYNLQPDRSVTGGAWYSDQDFESEFVEVLNQQCFKFLQNKAETARESKQNPMIQRNSSFASSHEVWKYICELGISKVELSMEDIETILNTLIYDGKVEMTIIAAKEGTVGSVDGHMKLYRAVSPIIPPTGLVRAPCGLCPVFDDCHEG-GEISPSNCIYMTEWLEF 316
BLAST of EMLSAG00000000299 vs. SwissProt
Match: gi|20139853|sp|Q9VD25.1|RPC6_DROME (RecName: Full=Probable DNA-directed RNA polymerase III subunit RPC6; Short=DNA-directed RNA polymerase III subunit F; Short=RNA polymerase III subunit C6) HSP 1 Score: 294.278 bits (752), Expect = 2.850e-98 Identity = 137/280 (48.93%), Postives = 196/280 (70.00%), Query Frame = 0 Query: 30 GISDKALQSLVPEIPNGDRAKAINDLLSSGKVQLFQSSQGILIKVKEAQDNXASNQASVKGGDAEEKIVFSIIQESGNKGTWIRDIRLKSNLIQTTLNKVLKSLETKKLIKAIKSVNATKKKVYMLYDLDPDVSVTGGAWYSNQDFETEFVEILNQQCFRYLYTKLEKSKDCPSGPVAGKHASCASSDDLLKYISELGISKISLKLNDIEMILDTLIYDGKIENVASEDSKKYYRATESLLPPTGLVRVPCGICPVIKDCKKSLGSINPKKCTYMKEWFE 309 G ++ L +P++P R +A+N LL G +++ + + ++ + K+ + A K D EEK+V+ I++E GNKG WIRDIR+KSNL LNK+LK+LETKKLIKA+KSVNA+KKKVYMLY+L+PD+S+TGGAWY +QDFE EFV++LNQQC R+L K + ++ GP+A K SC + +++ K+IS+LGISK++L D+E IL T++YDG E V +D YRA + LPPTGLV++PCGICPVIK+C + G + C YM++W + Sbjct: 19 GATNDDLTKALPDVPAATRVEALNILLQEGGIEILKKGEKLVYRAKDPE----KKSALPKDADNEEKVVYGIVEEGGNKGIWIRDIRMKSNLNMIQLNKILKNLETKKLIKAVKSVNASKKKVYMLYNLEPDLSITGGAWYQDQDFEVEFVDVLNQQCLRFLQMKRDSAEKKREGPLAFKQMSCCTVNEVQKFISDLGISKVNLAEADLETILKTVVYDGNAERVRQQDGSFVYRAVNAPLPPTGLVQMPCGICPVIKNC-SNCGDVTAITCEYMRDWLD 293
BLAST of EMLSAG00000000299 vs. SwissProt
Match: gi|20139429|sp|P91529.1|RPC6_CAEEL (RecName: Full=Probable DNA-directed RNA polymerase III subunit RPC6; Short=RNA polymerase III subunit C6; AltName: Full=DNA-directed RNA polymerase III subunit F) HSP 1 Score: 190.274 bits (482), Expect = 1.466e-57 Identity = 114/308 (37.01%), Postives = 177/308 (57.47%), Query Frame = 0 Query: 3 SSVKTEKMTPAEVRDRILALTKSKGNEGISDKALQSLVPEIPNGDRAKAINDLLSSGKVQLFQSSQGIL-IKVKEAQDNXASNQASVKGGDAEEKIVFSIIQESGNKGTWIRDIRLKSNLIQTTLNKVLKSLETKKLIKAIKSVNATKKKVYMLYDLDPDVSVTGGAWYSNQDFETEFVEILNQQCFRYLYTKLEKSKD-CPSGPVAGKHASCASSDDLLKYISELGISKISLKLNDIEMILDTLIYDGKIENVASEDSKKYYRATESLLPPTGLVRVPCGICPVIKDCKKSLGSINPKKCTYMKEWF 308 +S+K E ++ AE +++ + ++ EGI AL S+ P +P R AIN LLSS K+ + Q+ G+L +KV N + G EE++++S+I+ES +G WI+++R S L Q L K LKSLETKKLIK IK+V T +K Y+L+ ++PD+S+TGG +YS+Q ++E + L C Y ++ + + D P+ + AS ++ ++I+E + + L L D+E IL+ + DG IE A D K S + P LV VPC ICPV++DC+ I+P+ C YMK W Sbjct: 2 ASIKEELISAAESESQVMQIVQA-ALEGIDMDALTSMTPGLPQTVRQTAINSLLSSKKLAIQQAPGGVLRLKV---------NTSEQIAGTEEEQVIYSLIEESKTRGIWIKELREGSGLNQLQLRKTLKSLETKKLIKTIKAVGTT-RKCYILFSIEPDMSLTGGTFYSDQQLDSELINTLISVCGSYAASRRKHAIDENPNNIQMQREASYIRPQEIAQFITEKRVLNVPLSLEDLERILEVAVLDGTIERRA--DGKIRACPPRSSISP--LVSVPCAICPVVEDCRPGY-VISPQSCDYMKNWL 293
BLAST of EMLSAG00000000299 vs. SwissProt
Match: gi|9297041|sp|O94553.1|RPC6_SCHPO (RecName: Full=Probable DNA-directed RNA polymerase III subunit rpc6; Short=RNA polymerase III subunit C6; AltName: Full=DNA-directed RNA polymerase III 34 kDa polypeptide; AltName: Full=RNA polymerase III subunit C34) HSP 1 Score: 152.525 bits (384), Expect = 6.353e-43 Identity = 86/266 (32.33%), Postives = 150/266 (56.39%), Query Frame = 0 Query: 46 GDRAKAINDLLSSGKVQLFQSSQGILIKVKEAQDNXASNQASVKGGDAEEKIVFSIIQESGNKGTWIRDIRLKSNLIQTTLNKVLKSLETKKLIKAIKSVNATKKKVYMLYDLDPDVSVTGGAWYSNQDFETEFVEILNQQCFRYLYTKLEKSKDCPSGP--VAG-KHASCASSDDLLKYISELGISKISLKLNDIEMILDTLIYDGKIENVASEDSKKYYRATESLLPPTGLVRVPCGICPVIKDCKKSLGSINPKKCTYMKEWF 308 D + A+N LLS + + QG ++ + + + A ++++G +E+IV+S I+ SGN+G W + + L++NL + +++ LKSLE+K L+K+IKSV +K+YMLYDL P +TGG W+++Q+ + EF+E L + +RY+++K K GP V G ++ ++ + ++ I+K+ L L ++ ++D LIYDGK+E + S + R + PCG CPV C + +NP C Y+ +W Sbjct: 43 NDLSSALNILLSRRLLDPLR--QGNVLVYRAVRLDEAKTVSTMEG---DEQIVYSFIKNSGNEGIWRKTLTLRTNLHVSVVDRCLKSLESKNLVKSIKSVKNPTRKIYMLYDLVPSTELTGGPWFTDQELDVEFIENLKKVIYRYVHSKSFPPKKAAMGPDLVWGPEYNGYPTALQIHNWLRSTNITKVDLSLANVISLVDVLIYDGKVEKRSDGASYRAIRVNNENI--DAFTESPCGNCPVSDICDAN-SRVNPITCEYLDKWL 300
BLAST of EMLSAG00000000299 vs. SwissProt
Match: gi|74861297|sp|Q86JM3.1|RPC6_DICDI (RecName: Full=DNA-directed RNA polymerase III subunit rpc6; Short=RNA polymerase III subunit C6; AltName: Full=DNA-directed RNA polymerase III subunit F) HSP 1 Score: 145.591 bits (366), Expect = 1.844e-40 Identity = 82/269 (30.48%), Postives = 146/269 (54.28%), Query Frame = 0 Query: 49 AKAINDLLSSGKVQLFQSSQGILIKVKEAQDNXASNQASVKGGDAEEKIVFSIIQESGNKGTWIRDIRLKSNLIQTTLNKVLKSLETKKLIKAIKSVNATKKKVYMLYDLDPDVSVTGGAWYSNQDFETEFVEILNQQCFRYLYTKLEKSKDCPSGPVAGKHASCASSDDLLKYISELGISKISLKLNDIEMILDTLIYDGKIENVA--------SEDSKKYYRATESLLPPTGLVRVPCGICPVIKDCKKSLGSINPKKCTYMKEWFE 309 K IN+L+ G++ L Q+S + ++ +QA +G E+ +++ +I+ S N G W R+++ S Q + K+LK+LE++KLIK++KS+ + +KKVYMLY+++P +TGG YS+Q ++ ++++I+ ++ K G V A L+ ++E S+ SL DI+ +++T+IYDG IE + S Y+ T++ +P +PCG CPV C + G ++PK+C Y K++ E Sbjct: 37 VKVINNLIKQGRLMLIQNSD----ETTSYKEVNPEDQAKFRGLGVEDFLIYQLIEASSNTGAWTRELKNSSGYQQVQITKILKTLESRKLIKSVKSIQSGRKKVYMLYNMEPSREITGGQLYSDQSYDHQYIQIMKMHIKTFVDNK---------GAV-----DLADIITYLRKVAEEATSQ-SLGPEDIQALVNTVIYDGDIEEMRDTRMGAMLGRRSGILYKPTKTPIPVNNFCNMPCGNCPVFDICSDN-GLVSPKRCVYFKQYLE 285
BLAST of EMLSAG00000000299 vs. SwissProt
Match: gi|417698|sp|P32910.1|RPC6_YEAST (RecName: Full=DNA-directed RNA polymerase III subunit RPC6; Short=RNA polymerase III subunit C6; AltName: Full=C34; AltName: Full=DNA-directed RNA polymerase III 36 kDa polypeptide) HSP 1 Score: 108.227 bits (269), Expect = 3.985e-26 Identity = 69/232 (29.74%), Postives = 130/232 (56.03%), Query Frame = 0 Query: 47 DRAKAINDLLSSGKVQLFQSSQGILIKVKEAQDNXASNQASVKGGDAEEKIVFSIIQESGNKGTWIRDIRLKSNLIQTTLNKVLKSLETKKLIKAIKSVNATKKKVYMLYDLDPDVSVTGGAWYSNQDFETEFVEILNQQCFRYLY--TKLEKSKDCPSGP-----VAGKHASCASSDDLLKYISELGISKISLKLNDIEMILDTLIYDGKIENVASEDSKKYYRAT-ESLL 270 D + +LL ++L + Q +K + ++ A +A++ AEE +V+S I+ SG +G W + I+ ++NL Q + K LKSLE+++ +K++KSV +K+YMLY L P V +TGG W+++ + + EF+ L +R++ T K+ +GP A + +++ ++L++I+ ++ + L ++I + + L+YD K+E V + YR T ES+L Sbjct: 47 DLMSIVQELLDKNLIKLVK--QNDELKFQGVLESEAQKKATM---SAEEALVYSYIEASGREGIWSKTIKARTNLHQHVVLKCLKSLESQRYVKSVKSVKFPTRKIYMLYSLQPSVDITGGPWFTDGELDIEFINSLLTIVWRFISENTFPNGFKNFENGPKKNVFYAPNVKNYSTTQEILEFITAAQVANVELTPSNIRSLCEVLVYDDKLEKVTHD----CYRVTLESIL 269
BLAST of EMLSAG00000000299 vs. Select Arthropod Genomes
Match: XP_624984.1 (PREDICTED: probable DNA-directed RNA polymerase III subunit RPC6 [Apis mellifera]) HSP 1 Score: 318.546 bits (815), Expect = 5.268e-108 Identity = 155/295 (52.54%), Postives = 208/295 (70.51%), Query Frame = 0 Query: 15 VRDRILALTKSKGNEGISDKALQSLVPEIPNGDRAKAINDLLSSGKVQLFQSSQGILIKVKEAQDNXASNQASVKGGDAEEKIVFSIIQESGNKGTWIRDIRLKSNLIQTTLNKVLKSLETKKLIKAIKSVNATKKKVYMLYDLDPDVSVTGGAWYSNQDFETEFVEILNQQCFRYLYTKLEKSKDCPSGPVAGKHASCASSDDLLKYISELGISKISLKLNDIEMILDTLIYDGKIENVASEDSKKYYRATESLLPPTGLVRVPCGICPVIKDCKKSLGSINPKKCTYMKEWFE 309 + +I+AL +++ +GISDK L +P++ RA+ IN LLS G LF+ +L ++K+ S KG D EEKIV++II+E+GNKG WIRDIR KSNL+ T LNK+LKSLETKK IKA+KSV A+KKKVYMLY+L+PD SVTGGAWY +QDFE EFV++LNQQC+R+L K E+ C GP+ ++ + ASS ++ K+IS+LGISK+ L + D+EMIL+TL+YDGK+E S D YRA E LL P GL++ CG+CPV K+C +G + P KC Y+ EW E Sbjct: 24 IEQKIIALAQARP-KGISDKDLTIEMPDLQPAQRAQIINKLLSQGHFDLFKQGGSLLYRLKDP-----SKAKIAKGADNEEKIVYTIIEEAGNKGIWIRDIRFKSNLMPTQLNKILKSLETKKFIKAVKSVAASKKKVYMLYNLEPDTSVTGGAWYQDQDFEAEFVDVLNQQCYRFLEKKKEQMNSCGGGPIMARNVTFASSKEVWKFISDLGISKVKLSVEDLEMILNTLVYDGKVERTLSGDGNTLYRAVEPLLNPPGLIKSTCGVCPVRKNC-CDVGDVTPTKCQYITEWLE 311
BLAST of EMLSAG00000000299 vs. Select Arthropod Genomes
Match: EEB19012.1 (DNA-directed RNA polymerase III subunit F, putative [Pediculus humanus corporis]) HSP 1 Score: 306.99 bits (785), Expect = 2.517e-103 Identity = 155/308 (50.32%), Postives = 208/308 (67.53%), Query Frame = 0 Query: 2 DSSVKTEKMTPAEVRDRILALTKSKGNEGISDKALQSLVPEIPNGDRAKAINDLLSSGKVQLFQSSQGILIKVKEAQDNXASNQASVKGGDAEEKIVFSIIQESGNKGTWIRDIRLKSNLIQTTLNKVLKSLETKKLIKAIKSVNATKKKVYMLYDLDPDVSVTGGAWYSNQDFETEFVEILNQQCFRYLYTKLEKSKDCPSGPVAGKHASCASSDDLLKYISELGISKISLKLNDIEMILDTLIYDGKIENVASEDSKKYYRATESLLPPTGLVRVPCGICPVIKDCKKSLGSINPKKCTYMKEWFE 309 D VK + + +L + K K +G SD +QS P + DR +N LLS+G + LF ++ K K+ + SVKG D EEK+V+SI++ +GNKG WIRDIR +SNL+ T LNK+LK+LE KKLIKA+KSV+A+KKKVYMLY+L+PD S+TGGAWYS+QDFE EFV +L+QQC+R+L K EK KD P K+ S ASS ++ K+ISELGIS++ L + DIE ILDT++YDGK+E D K YRA E LLP G+V+ PCG+CPV + C +GS+ PKKC Y++ W + Sbjct: 14 DIKVKEQSEVSEDAVSEVLNIIK-KYPKGASDHEIQSEAPSLIPEDRVAILNKLLSTGHIDLFNQGGKLIYKFKDV-----AKGDSVKGADNEEKVVYSIVEAAGNKGIWIRDIRYQSNLLPTQLNKILKALENKKLIKAVKSVSASKKKVYMLYNLEPDKSLTGGAWYSDQDFEAEFVGVLSQQCYRFLQQKQEKLKDFNGSPRQWKNMSYASSKEVWKFISELGISRVMLSVEDIETILDTIVYDGKVEKAVDVDLTKIYRAVEPLLPAPGIVQTPCGVCPVYQFC-GDVGSVTPKKCEYLRNWLD 314
BLAST of EMLSAG00000000299 vs. Select Arthropod Genomes
Match: AFH06555.1 (CG5380, isoform B [Drosophila melanogaster]) HSP 1 Score: 294.278 bits (752), Expect = 1.381e-98 Identity = 137/280 (48.93%), Postives = 196/280 (70.00%), Query Frame = 0 Query: 30 GISDKALQSLVPEIPNGDRAKAINDLLSSGKVQLFQSSQGILIKVKEAQDNXASNQASVKGGDAEEKIVFSIIQESGNKGTWIRDIRLKSNLIQTTLNKVLKSLETKKLIKAIKSVNATKKKVYMLYDLDPDVSVTGGAWYSNQDFETEFVEILNQQCFRYLYTKLEKSKDCPSGPVAGKHASCASSDDLLKYISELGISKISLKLNDIEMILDTLIYDGKIENVASEDSKKYYRATESLLPPTGLVRVPCGICPVIKDCKKSLGSINPKKCTYMKEWFE 309 G ++ L +P++P R +A+N LL G +++ + + ++ + K+ + A K D EEK+V+ I++E GNKG WIRDIR+KSNL LNK+LK+LETKKLIKA+KSVNA+KKKVYMLY+L+PD+S+TGGAWY +QDFE EFV++LNQQC R+L K + ++ GP+A K SC + +++ K+IS+LGISK++L D+E IL T++YDG E V +D YRA + LPPTGLV++PCGICPVIK+C + G + C YM++W + Sbjct: 19 GATNDDLTKALPDVPAATRVEALNILLQEGGIEILKKGEKLVYRAKDPE----KKSALPKDADNEEKVVYGIVEEGGNKGIWIRDIRMKSNLNMIQLNKILKNLETKKLIKAVKSVNASKKKVYMLYNLEPDLSITGGAWYQDQDFEVEFVDVLNQQCLRFLQMKRDSAEKKREGPLAFKQMSCCTVNEVQKFISDLGISKVNLAEADLETILKTVVYDGNAERVRQQDGSFVYRAVNAPLPPTGLVQMPCGICPVIKNC-SNCGDVTAITCEYMRDWLD 293
BLAST of EMLSAG00000000299 vs. Select Arthropod Genomes
Match: AAF55978.1 (CG5380, isoform A [Drosophila melanogaster]) HSP 1 Score: 294.278 bits (752), Expect = 1.381e-98 Identity = 137/280 (48.93%), Postives = 196/280 (70.00%), Query Frame = 0 Query: 30 GISDKALQSLVPEIPNGDRAKAINDLLSSGKVQLFQSSQGILIKVKEAQDNXASNQASVKGGDAEEKIVFSIIQESGNKGTWIRDIRLKSNLIQTTLNKVLKSLETKKLIKAIKSVNATKKKVYMLYDLDPDVSVTGGAWYSNQDFETEFVEILNQQCFRYLYTKLEKSKDCPSGPVAGKHASCASSDDLLKYISELGISKISLKLNDIEMILDTLIYDGKIENVASEDSKKYYRATESLLPPTGLVRVPCGICPVIKDCKKSLGSINPKKCTYMKEWFE 309 G ++ L +P++P R +A+N LL G +++ + + ++ + K+ + A K D EEK+V+ I++E GNKG WIRDIR+KSNL LNK+LK+LETKKLIKA+KSVNA+KKKVYMLY+L+PD+S+TGGAWY +QDFE EFV++LNQQC R+L K + ++ GP+A K SC + +++ K+IS+LGISK++L D+E IL T++YDG E V +D YRA + LPPTGLV++PCGICPVIK+C + G + C YM++W + Sbjct: 19 GATNDDLTKALPDVPAATRVEALNILLQEGGIEILKKGEKLVYRAKDPE----KKSALPKDADNEEKVVYGIVEEGGNKGIWIRDIRMKSNLNMIQLNKILKNLETKKLIKAVKSVNASKKKVYMLYNLEPDLSITGGAWYQDQDFEVEFVDVLNQQCLRFLQMKRDSAEKKREGPLAFKQMSCCTVNEVQKFISDLGISKVNLAEADLETILKTVVYDGNAERVRQQDGSFVYRAVNAPLPPTGLVQMPCGICPVIKNC-SNCGDVTAITCEYMRDWLD 293
BLAST of EMLSAG00000000299 vs. Select Arthropod Genomes
Match: gb|EFA07655.1| (putative DNA-directed RNA polymerase III subunit RPC6-like Protein [Tribolium castaneum]) HSP 1 Score: 293.893 bits (751), Expect = 2.095e-98 Identity = 147/293 (50.17%), Postives = 201/293 (68.60%), Query Frame = 0 Query: 17 DRILALTKSKGNEGISDKALQSLVPEIPNGDRAKAINDLLSSGKVQLFQSSQGILIKVKEAQDNXASNQASVKGGDAEEKIVFSIIQESGNKGTWIRDIRLKSNLIQTTLNKVLKSLETKKLIKAIKSVNATKKKVYMLYDLDPDVSVTGGAWYSNQDFETEFVEILNQQCFRYLYTKLEKSKDCPSGPVAGKHASCASSDDLLKYISELGISKISLKLNDIEMILDTLIYDGKIENVASEDSKKYYRATESLLPPTGLVRVPCGICPVIKDCKKSLGSINPKKCTYMKEWFE 309 DR+L L K+K EGIS++ ++ +P +P + A IN L +G ++LF++ +L K K++ S + +++G D EEK+VF II+E+GNKG WIRDIR KSNL T LNKVLKSLETKK+IKA+KSV+A+KKKVYMLYDL+ D SVTGGAWY +QDFE+EFV++L+QQC RYL K E + GP+ ++ S A++ D+ K+ISELGISKISL ++DIE IL T++ D E + + + YRA + G+V CG+CP+ C + G INPK C Y EW E Sbjct: 16 DRLLELAKAKP-EGISNENIKQAIPNLPLEELALIINKCLKNGSLELFKTKDKLLYKYKDS-----SKKPAIRGADNEEKVVFKIIEEAGNKGIWIRDIRFKSNLNMTQLNKVLKSLETKKIIKAVKSVSASKKKVYMLYDLEADSSVTGGAWYQDQDFESEFVDVLSQQCCRYLRQKWEDANSMGGGPLLARNRSYATAQDVHKFISELGISKISLSVDDIESILYTVVLDNNAERIVATNGSFLYRAVNKFMQTPGIVTTTCGVCPIASRCADT-GFINPKVCNYFTEWLE 301
BLAST of EMLSAG00000000299 vs. Select Arthropod Genomes
Match: EAA00356.3 (AGAP011973-PA [Anopheles gambiae str. PEST]) HSP 1 Score: 286.96 bits (733), Expect = 9.137e-96 Identity = 144/297 (48.48%), Postives = 203/297 (68.35%), Query Frame = 0 Query: 13 AEVRDRILALTKSKGNEGISDKALQSLVPEIPNGDRAKAINDLLSSGKVQLFQSSQGILIKVKEAQDNXASNQASVKGGDAEEKIVFSIIQESGNKGTWIRDIRLKSNLIQTTLNKVLKSLETKKLIKAIKSVNATKKKVYMLYDLDPDVSVTGGAWYSNQDFETEFVEILNQQCFRYLYTKLEKSKDCPSGPVAGKHASCASSDDLLKYISELGISKISLKLNDIEMILDTLIYDGKIENVASEDSKKYYRATESLLPPTGLVRVPCGICPVIKDCKKSLGSINPKKCTYMKEWFE 309 A++ +I+AL K K EGI++ L + +P R +A+N LL +++ + ++ ++K+ ++ K D EE+++++I++E GNKG WIRDIR+KSNL+ T LNKVLK LE KKLIKA+KSVNA+KKKVYMLY+L+PD S+TGGAWY +QDFE EFV++LNQQC R+L K E +K GP+A + S S D+ ++IS+LGISKISL +D+E IL T++YDGK E VA YRA E+ + GLV++PCGICPV+K+C G I P+ CTY+ EW + Sbjct: 5 AQIGFQIIALAKDK-PEGINNDDLAESLQSVPPEQRVQALNKLLQEAVLEILKKGNTLIYRLKDP----GKKSSAPKDIDNEERVIYNIVEEGGNKGIWIRDIRVKSNLVMTQLNKVLKQLENKKLIKAVKSVNASKKKVYMLYNLEPDRSITGGAWYQDQDFEAEFVDVLNQQCLRFLRQKREVAKGSGEGPLAVQKLSECSVADVHRFISDLGISKISLDEDDLETILKTVVYDGKAERVAQISGGFLYRAIETPIAAPGLVQMPCGICPVVKNC-ADCGEITPQLCTYISEWLD 295
BLAST of EMLSAG00000000299 vs. Select Arthropod Genomes
Match: gb|KFM77602.1| (DNA-directed RNA polymerase III subunit RPC6, partial [Stegodyphus mimosarum]) HSP 1 Score: 278.485 bits (711), Expect = 2.615e-92 Identity = 144/304 (47.37%), Postives = 199/304 (65.46%), Query Frame = 0 Query: 15 VRDRILALTKSKGNEGISDKALQSLVPEIPNGDRAKAINDLLSSGKVQLFQSSQGILIKVKEAQDNXASNQASVKGGDAEEKIVFSIIQESGNKGTWIRDIRLKSNLIQTTLNKVLKSLETKKLIKAIKSVNATKKKVYMLYDLDPDVSVTGGAWYSNQDFETEFVEILNQQCFRYLYTKLEKSKDCPSGPVAGKHASCASSDDLLKYISELGISKISLKLNDIEMILDTLIYDGKIENVASED--------SKKYYRATESLLPPTGLVRVPCGICPVIKDCKKSLGSINPKKCTYMKEWFEI 310 V D IL L N GI++K LQ+ +P A+N L ++ K+Q+ ++ K+K+ + +G D E+K+++ II+++GNKG WIRD+R +SNL QT +NK+LKSLE KKLIK++KSV A KKKVYMLY+++PD SVTGG WYS+Q+FE+EFV++LNQQCFRYL T+ + D S PV+ ++AS SS D+ YI+ L +SK+ L L DIE ILDTLIYDGK+E E + YR + L+ GL+RVPCG+CPV +C++ G I+P C YMKEW E Sbjct: 8 VEDSILELLNKHPN-GITNKVLQNAMPSTGPAQLVDALNKLTAADKIQILNKGSQLMYKLKDQESARI-----CRGADLEDKLIYQIIEKAGNKGIWIRDLRFESNLPQTQVNKILKSLENKKLIKSVKSVAAAKKKVYMLYNIEPDRSVTGGTWYSDQEFESEFVDVLNQQCFRYL-TQAKIVADKLSDPVSQRNASYKSSKDVCNYINGLKVSKVQLSLQDIETILDTLIYDGKVEKSVVEHGSTSNDSGGENLYRVIKPLVHSCGLMRVPCGVCPVHSECQEG-GVISPSTCPYMKEWLEF 303
BLAST of EMLSAG00000000299 vs. Select Arthropod Genomes
Match: EFX74838.1 (hypothetical protein DAPPUDRAFT_56706 [Daphnia pulex]) HSP 1 Score: 239.195 bits (609), Expect = 1.119e-76 Identity = 135/312 (43.27%), Postives = 194/312 (62.18%), Query Frame = 0 Query: 13 AEVRDRILALTKSKGNEGISDKALQSLVPEIPNGDRAKAINDLLSSGKVQLFQS-----------SQGILIKVKEAQDNXASNQASVKGGDAEEKIVFSIIQESGNKGTWIRDIRLKSNLIQTTLNKVLKSLETKKLIKAIKSVNATKKKVYMLYDLDPDVSVTGGAWYSNQDFETEFVEILNQQCFRYLYTKLEKSK-DCPSGPVAGKHASCASSDDLLKYISELGISKISLKLNDIEMILDTLIYDGKIE--NVASEDSK-KYYRATESLLPPTGLVRVPCGICPVIKDCKKSLGSINPKKCTYMKEWFE 309 E+ RIL L + K +GI+DK L++ +P + R INDLL+ K++LFQ+ Q + IK+KE D EE +V II+E+GNKG +DIR +S L TT+NK+LK+LE K LIK++ S++ K KVYML+DL PD SVTGG+WY++ +FE+E V+I+NQQC+R L K E +K GP+ ++AS SS ++ + IS++ I K +L + +IE IL+TL+YDGKIE V+ D + K YR E+LL +VR+PCG+CPVIK C + G + PK C Y +W + Sbjct: 27 TEIEARILELLR-KYPKGINDKILETHMPNLDIQIRVDVINDLLTKKKMKLFQAPGTNELFWGLNEQPVSIKLKEV--------------DKEENVVMRIIEEAGNKGILNKDIRDQSGLNLTTINKILKALEGKNLIKSVLSISVAKIKVYMLFDLQPDRSVTGGSWYTDGEFESELVDIVNQQCYRMLQQKAEAAKLKAMDGPLIVRNASFLSSKEICQMISDMNIVKFNLTVEEIEAILETLVYDGKIEMRMVSDGDERIKTYRIVETLLSSAAIVRIPCGVCPVIKICGTA-GEVQPKNCVYYDQWLD 322
BLAST of EMLSAG00000000299 vs. Select Arthropod Genomes
Match: EFX74835.1 (hypothetical protein DAPPUDRAFT_199715 [Daphnia pulex]) HSP 1 Score: 237.654 bits (605), Expect = 4.991e-76 Identity = 134/312 (42.95%), Postives = 193/312 (61.86%), Query Frame = 0 Query: 13 AEVRDRILALTKSKGNEGISDKALQSLVPEIPNGDRAKAINDLLSSGKVQLFQS-----------SQGILIKVKEAQDNXASNQASVKGGDAEEKIVFSIIQESGNKGTWIRDIRLKSNLIQTTLNKVLKSLETKKLIKAIKSVNATKKKVYMLYDLDPDVSVTGGAWYSNQDFETEFVEILNQQCFRYLYTKLEKSK-DCPSGPVAGKHASCASSDDLLKYISELGISKISLKLNDIEMILDTLIYDGKIE--NVASEDSK-KYYRATESLLPPTGLVRVPCGICPVIKDCKKSLGSINPKKCTYMKEWFE 309 E+ RIL L + K +GI+DK L++ +P + R INDLL+ K++LFQ+ Q + IK+KE D EE +V II+E+GNKG +DIR +S L TT+NK+LK+LE K LIK++ S++ K KVYML+DL PD SVTGG+WY++ +FE+E V+I+NQQC+R L K E +K GP+ ++AS SS ++ + IS++ I K +L + +IE IL+TL+YDGKIE V+ D + K YR E+LL +VR+PCG+CPVI C + G + PK C Y +W + Sbjct: 27 TEIEARILELLR-KYPKGINDKILETHMPNLDIQIRVDVINDLLTKKKMKLFQAPGTNELFWGLNEQPVSIKLKEV--------------DKEENVVMRIIEEAGNKGILNKDIRDQSGLNLTTINKILKALEGKNLIKSVLSISVAKIKVYMLFDLQPDRSVTGGSWYTDGEFESELVDIVNQQCYRMLQQKAEAAKLKAMDGPLIVRNASFLSSKEICQMISDMNIVKFNLTVEEIEAILETLVYDGKIEMRMVSDGDERIKTYRIVETLLSSAAIVRIPCGVCPVIVKCGTA-GEVQPKNCVYYDQWLD 322
BLAST of EMLSAG00000000299 vs. Select Arthropod Genomes
Match: EFX62917.1 (hypothetical protein DAPPUDRAFT_130662 [Daphnia pulex]) HSP 1 Score: 217.624 bits (553), Expect = 1.474e-68 Identity = 133/310 (42.90%), Postives = 190/310 (61.29%), Query Frame = 0 Query: 4 SVKTEKMTPAEVRDRILALTKSKGNEGISDKALQSLVPEIPNGDRAKAINDLLSSGKVQLFQS--SQGILIKVKEAQDNXASNQASVKGGDAEEKIVFSIIQESGNKGTWIRDIRLKSNLIQTTLNKVLKSLETKKLIKAIKSVNATKKKVYMLYDLDPDVSVTGGAWYSNQDFETEFVEILNQQCFRYLYTKLEKSKD-CPSGPVAGKHASCASSDDLLKYISELGISKISLKLNDIEMILDTLIYDGKIENVASEDSKKYYRATESLLPPTGLVRVPCGICPVIKDCKKSLGS-INPKKCTYMKEWFE 309 S K ++ T AE+ R+L L + + +GI+ K L++ +P + + +N LLS KV +FQ+ ++ + +K+ + +KG D+EEKIV II+E+GNKG W RDIR KS+L QTTLNK+LK+LE KKLIK++ SV+A KKKVYML++L PD SVTGG+WYS+ +FE+E V+ILNQQC+R L K E +K GP +++S SS ++ + IS++ I K +L + DIE ILDTLIYDGKIE + P V C C + +SL S + PK C Y +W + Sbjct: 21 SAKHDEQTEAEIEARMLELLR-EFPKGINYKILETDMPNVDKIIKVNTLNRLLSQEKVNMFQAPGTKELFWCLKQQP------ASKLKGVDSEEKIVMRIIEEAGNKGIWNRDIRTKSSLNQTTLNKILKALEGKKLIKSVSSVSAAKKKVYMLFNLQPDRSVTGGSWYSDNEFESELVDILNQQCYRILQQKSEAAKQKSMDGPFVVRNSSFLSSKEICQIISDMKIVKFNLTVEDIETILDTLIYDGKIE-----------------MSP-----VLCWNC---SNPLRSLSSAVQPKNCVYYDQWLD 298
BLAST of EMLSAG00000000299 vs. nr
Match: gi|345790127|ref|XP_857138.2| (PREDICTED: DNA-directed RNA polymerase III subunit RPC6 isoform X2 [Canis lupus familiaris]) HSP 1 Score: 326.635 bits (836), Expect = 2.680e-108 Identity = 163/309 (52.75%), Postives = 217/309 (70.23%), Query Frame = 0 Query: 12 PAEVRDRILALTKSKGNEGISDKALQSLVPEIPNGDRAKAINDLLSSGKVQLFQSSQGILIKVKEAQDNXASNQASVKGGDAEEKIVFSIIQESGNKGTWIRDIRLKSNLIQTTLNKVLKSLETKKLIKAIKSVNATKKKVYMLYDLDPDVSVTGGAWYSNQDFETEFVEILNQQCFRYLYTKLEKSKDCPSGPVAGKHASCASSDDLLKYISELGISKISLKLNDIEMILDTLIYDGKIE---------NVASEDSK-KYYRATESLLPPTGLVRVPCGICPVIKDCKKSLGSINPKKCTYMKEWFEI 310 P EV +RI+ L + GI+D+ +Q+ +P I RA AIN LLS G++ L +S+ G+L ++K++Q N +KG D +EK+V+ II+++GNKG W RDIR KSNL T +NK+LK+LE+KKLIKA+KSV A+KKKVYMLY+L PD SVTGGAWYS+QDFE+EFVE+LNQQCF++L TK E +++ P+ +++S ASS ++ KYI ELGISK+ L + DIE IL+TLIYDGK+E V S D K YRA ++PPTGLVR PCG+CPV DC + G I+P C YM EW E Sbjct: 15 PVEVENRIIELCH-QFPHGITDQVIQNEMPHIEAQQRAVAINRLLSMGQLDLLRSNTGLLYRIKDSQ-----NAGKMKGSDNQEKLVYQIIEDAGNKGIWSRDIRYKSNLPLTEINKILKNLESKKLIKAVKSVAASKKKVYMLYNLQPDRSVTGGAWYSDQDFESEFVEVLNQQCFKFLQTKAETARESKQNPMIQRNSSFASSHEVWKYICELGISKVELSMEDIETILNTLIYDGKVEMTIIAAKEGTVGSVDGHMKLYRAVNPIIPPTGLVRAPCGLCPVFDDCHEG-GEISPSNCIYMTEWLEF 316
BLAST of EMLSAG00000000299 vs. nr
Match: gi|817219419|ref|XP_012285446.1| (PREDICTED: DNA-directed RNA polymerase III subunit RPC6 isoform X2 [Orussus abietinus]) HSP 1 Score: 326.25 bits (835), Expect = 2.730e-108 Identity = 160/301 (53.16%), Postives = 215/301 (71.43%), Query Frame = 0 Query: 8 EKMTPAEVRDRILALTKSKGNEGISDKALQSLVPEIPNGDRAKAINDLLSSGKVQLFQSSQGILIKVKEAQDNXASNQASVKGGDAEEKIVFSIIQESGNKGTWIRDIRLKSNLIQTTLNKVLKSLETKKLIKAIKSVNATKKKVYMLYDLDPDVSVTGGAWYSNQDFETEFVEILNQQCFRYLYTKLEKSKDCPSGPVAGKHASCASSDDLLKYISELGISKISLKLNDIEMILDTLIYDGKIENVASEDSKKYYRATESLLPPTGLVRVPCGICPVIKDCKKSLGSINPKKCTYMKEWF 308 E + P V +I+AL ++K +GISDK + + +PE+ +A+AIN LL+ G + LF+ ++ ++K+ S + KG D EEKIV++II+E+GNKG WIRDIR KSNL+ T LNK+LKSLETKK IKA+KSV A+KKKVYMLY+L+PD SVTGGAWY +QDFE EFV++LNQQC+R+L K E KD GP+A ++A+ ASS ++ K+IS+LGISKI L + D+EMIL+TL+YDGK+E + D YRA LL P GLVR PCG+CPV K+C +G + P C Y+ EW Sbjct: 18 EAIAPESVEQKIIALAQTK-VKGISDKDIAAEMPELLPQRKAEAINKLLTQGYIDLFKQGNALIYRLKDP-----SKAKTAKGADNEEKIVYTIIEEAGNKGIWIRDIRFKSNLMPTQLNKILKSLETKKFIKAVKSVAASKKKVYMLYNLEPDRSVTGGAWYQDQDFEAEFVDVLNQQCYRFLEQKKETIKDGKGGPIAARNATYASSKEVWKFISDLGISKIKLSVEDLEMILNTLVYDGKVEKTLTSDGSILYRAIRPLLDPPGLVRTPCGMCPVRKNC-CDIGDVTPTLCQYITEWL 311
BLAST of EMLSAG00000000299 vs. nr
Match: gi|1003757478|ref|XP_015712505.1| (PREDICTED: DNA-directed RNA polymerase III subunit RPC6 [Coturnix japonica]) HSP 1 Score: 326.25 bits (835), Expect = 3.117e-108 Identity = 165/316 (52.22%), Postives = 221/316 (69.94%), Query Frame = 0 Query: 5 VKTEKMTPAEVRDRILALTKSKGNEGISDKALQSLVPEIPNGDRAKAINDLLSSGKVQLFQSSQGILIKVKEAQDNXASNQASVKGGDAEEKIVFSIIQESGNKGTWIRDIRLKSNLIQTTLNKVLKSLETKKLIKAIKSVNATKKKVYMLYDLDPDVSVTGGAWYSNQDFETEFVEILNQQCFRYLYTKLEKSKDCPSGPVAGKHASCASSDDLLKYISELGISKISLKLNDIEMILDTLIYDGKIE---------NVASEDSK-KYYRATESLLPPTGLVRVPCGICPVIKDCKKSLGSINPKKCTYMKEWFEI 310 VK E P ++ RI+ L + + GI+D+ +Q+ +P + RA AIN LLS G++ L +SS G+L ++KE+Q N + +KG D +EK+V+ II+++GNKG W RDIR KSNL T +NK+LK+LE+KKLIKA+KSV A+KKKVYMLY+L PD SVTGGAWYS+QDFE+EFVE+LNQQCF++L +K E +++ PV +++S ASS ++ KYI ELGISK+ L + DIE IL+TLIYDGK+E V S D + K YRA L+ PTGLVR PCG+CPV DC + G I+P C YM EW E Sbjct: 6 VKPEVPDPVDIESRIIELCQ-QFPHGITDQVIQNDMPHMEAQQRAMAINRLLSMGQLDLLRSSTGLLYRIKESQ-----NASKMKGSDNQEKLVYQIIEDAGNKGIWSRDIRYKSNLPLTEINKILKNLESKKLIKAVKSVAASKKKVYMLYNLQPDRSVTGGAWYSDQDFESEFVEVLNQQCFKFLQSKAEAARESKQNPVIQRNSSFASSHEVWKYICELGISKVELSMEDIETILNTLIYDGKVEMTIIAAKEGTVGSVDGQMKLYRAVSPLIQPTGLVRTPCGLCPVFDDCHEG-GEISPSNCIYMTEWLEF 314
BLAST of EMLSAG00000000299 vs. nr
Match: gi|478519102|ref|XP_004433773.1| (PREDICTED: DNA-directed RNA polymerase III subunit RPC6 isoform X2 [Ceratotherium simum simum]) HSP 1 Score: 326.25 bits (835), Expect = 3.262e-108 Identity = 162/309 (52.43%), Postives = 218/309 (70.55%), Query Frame = 0 Query: 12 PAEVRDRILALTKSKGNEGISDKALQSLVPEIPNGDRAKAINDLLSSGKVQLFQSSQGILIKVKEAQDNXASNQASVKGGDAEEKIVFSIIQESGNKGTWIRDIRLKSNLIQTTLNKVLKSLETKKLIKAIKSVNATKKKVYMLYDLDPDVSVTGGAWYSNQDFETEFVEILNQQCFRYLYTKLEKSKDCPSGPVAGKHASCASSDDLLKYISELGISKISLKLNDIEMILDTLIYDGKIE---------NVASEDSK-KYYRATESLLPPTGLVRVPCGICPVIKDCKKSLGSINPKKCTYMKEWFEI 310 P E+ +RI+ L + + GI+D+ +Q+ +P I RA AIN LLS G++ L +S+ G+L ++K++Q N +KG D +EK+V+ II+++GNKG W RDIR KSNL T +NK+LK+LE+KKLIKA+KSV A+KKKVYMLY+L PD SVTGGAWYS+QDFE+EFVE+LNQQCF++L TK E +++ P+ +++S ASS ++ KYI ELGISK+ L + DIE IL+TLIYDGK+E V S D K YRA ++PPTGLVR PCG+CPV DC + G I+P C YM EW E Sbjct: 15 PVEIENRIIELCQ-QFPHGITDQVIQNEMPHIEAQQRAVAINRLLSMGQLDLLRSNTGLLYRIKDSQ-----NAGKMKGSDNQEKLVYQIIEDAGNKGIWSRDIRYKSNLPLTEINKILKNLESKKLIKAVKSVAASKKKVYMLYNLQPDRSVTGGAWYSDQDFESEFVEVLNQQCFKFLQTKAETARESKQNPMIQRNSSFASSHEVWKYICELGISKVELSMEDIETILNTLIYDGKVEMTIIAAKEGTVGSVDGHMKLYRAVNPIIPPTGLVRAPCGLCPVFDDCHEG-GEISPSNCIYMTEWLEF 316
BLAST of EMLSAG00000000299 vs. nr
Match: gi|1002588560|ref|XP_015672902.1| (PREDICTED: DNA-directed RNA polymerase III subunit RPC6 isoform X1 [Protobothrops mucrosquamatus]) HSP 1 Score: 326.25 bits (835), Expect = 3.767e-108 Identity = 160/309 (51.78%), Postives = 222/309 (71.84%), Query Frame = 0 Query: 12 PAEVRDRILALTKSKGNEGISDKALQSLVPEIPNGDRAKAINDLLSSGKVQLFQSSQGILIKVKEAQDNXASNQASVKGGDAEEKIVFSIIQESGNKGTWIRDIRLKSNLIQTTLNKVLKSLETKKLIKAIKSVNATKKKVYMLYDLDPDVSVTGGAWYSNQDFETEFVEILNQQCFRYLYTKLEKSKDCPSGPVAGKHASCASSDDLLKYISELGISKISLKLNDIEMILDTLIYDGKIEN--VASEDSK--------KYYRATESLLPPTGLVRVPCGICPVIKDCKKSLGSINPKKCTYMKEWFEI 310 P E+ +RI+ L + GI+D+ +Q+ +P + RA AIN LLS G++ L +SS G+L ++KE+Q N A +KG D +EK+V+ II+++GNKG W RDIR KSNL T +NK+LK+LE+KKLIKA+KSV A+KKKVYMLY+L PD SVTGGAWYS+QDFE+EFVE+LNQQCF++L TK E +++ P+ +++S ASS ++ KYISELGISK+ L + DIE IL+TLIYDGK+E +A++++ K YRA ++ PTGL+R+PCG+CPV DC + G ++P C YM EW E Sbjct: 18 PLEIENRIIELCH-QFPHGITDQVIQNDMPHMEAQQRAMAINRLLSMGQLDLLRSSGGLLYRIKESQ-----NAAKMKGSDNQEKLVYQIIEDAGNKGIWSRDIRYKSNLPLTEINKILKNLESKKLIKAVKSVAASKKKVYMLYNLQPDRSVTGGAWYSDQDFESEFVEVLNQQCFKFLQTKAEAARETKQNPMIQRNSSFASSHEVWKYISELGISKVELSMEDIETILNTLIYDGKVEMTIIAAKEASAGSVDGHMKLYRAISPVIQPTGLIRIPCGLCPVFDDCHEG-GEVSPANCVYMMEWLEF 319
BLAST of EMLSAG00000000299 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold619_size123246-snap-gene-0.37 (protein:Tk05503 transcript:maker-scaffold619_size123246-snap-gene-0.37-mRNA-1 annotation:"dna-directed rna polymerase iii subunit rpc6") HSP 1 Score: 340.117 bits (871), Expect = 1.677e-117 Identity = 179/298 (60.07%), Postives = 232/298 (77.85%), Query Frame = 0 Query: 14 EVRDRILALTKSKGNEGISDKALQSLVPEIPNGDRAKAINDLLSSGKVQLFQSSQGILIKVKEAQDNXASNQASVKGGDAEEKIVFSIIQESGNKGTWIRDIRLKSNLIQTTLNKVLKSLETKKLIKAIKSVNATKKKVYMLYDLDPDVSVTGGAWYSNQDFETEFVEILNQQCFRYLYTKLEKSKDCPSGPVAGKHASCASSDDLLKYISELGISKISLKLNDIEMILDTLIYDGKIEN---VASEDSKKYYRATESLLPPTGLVRVPCGICPVIKDCKKSLGSINPKKCTYMKEWF 308 E+ +RILAL K GI+DK LQ+ +P++ RA AIN LL++GK+ L QS +G+L K K AS++ GDAEEK+V+ II+E+GNKGTWIRDIR+KSNLIQT LNK LKSL++KKLIK +K VN+T+K VYML++L+PD SVTGGAWYS+QDFE+EFVEILNQQC+RYLY KLEKS++C SGP+ ++ S ASS ++L+YISELGISK+ L++ DIE ILDTLI+DGK+E +A + + +RA ESLLP TGL+R+PCG CPVIK+C +GS+NP KC+YM EW Sbjct: 22 ELAERILALCKEIPT-GINDKLLQTSMPDVDPKSRALAINHLLTTGKIDLLQSEKGLLYKAK-----SASSKVGTIKGDAEEKLVYKIIEEAGNKGTWIRDIRIKSNLIQTQLNKALKSLKSKKLIKDVKCVNSTRKIVYMLFNLEPDSSVTGGAWYSDQDFESEFVEILNQQCYRYLYQKLEKSRECTSGPLVARNISQASSKEVLQYISELGISKVQLRVEDIEAILDTLIFDGKVEKTMALAEGEETRLFRAVESLLPVTGLMRMPCGGCPVIKEC-GDVGSVNPIKCSYMTEWL 312 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000299 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 25
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BLAST of EMLSAG00000000299 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 6
BLAST of EMLSAG00000000299 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000000299 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 8
BLAST of EMLSAG00000000299 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 15
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BLAST of EMLSAG00000000299 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
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BLAST of EMLSAG00000000299 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1044:32287..33278- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000299-683065 ID=EMLSAG00000000299-683065|Name=EMLSAG00000000299|organism=Lepeophtheirus salmonis|type=gene|length=992bp|location=Sequence derived from alignment at LSalAtl2s1044:32287..33278- (Lepeophtheirus salmonis)back to top Add to Basket
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