EMLSAG00000000376, EMLSAG00000000376-683142 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000376 vs. C. finmarchicus
Match: gi|592887804|gb|GAXK01070571.1| (TSA: Calanus finmarchicus comp215363_c3_seq7 transcribed RNA sequence) HSP 1 Score: 25.409 bits (54), Expect = 7.969e+0 Identity = 9/19 (47.37%), Postives = 11/19 (57.89%), Query Frame = 0 Query: 6 YYGCLYSRKKCNSAWRIEQ 24 Y+GC YS + CN W Q Sbjct: 64 YFGCRYSCQICNKVWHYPQ 120
BLAST of EMLSAG00000000376 vs. C. finmarchicus
Match: gi|592887810|gb|GAXK01070565.1| (TSA: Calanus finmarchicus comp215363_c3_seq1 transcribed RNA sequence) HSP 1 Score: 25.409 bits (54), Expect = 9.768e+0 Identity = 9/19 (47.37%), Postives = 11/19 (57.89%), Query Frame = 0 Query: 6 YYGCLYSRKKCNSAWRIEQ 24 Y+GC YS + CN W Q Sbjct: 896 YFGCRYSCQICNKVWHYPQ 952
BLAST of EMLSAG00000000376 vs. L. salmonis peptides
Match: EMLSAP00000000376 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1057:99555:102319:-1 gene:EMLSAG00000000376 transcript:EMLSAT00000000376 description:"maker-LSalAtl2s1057-augustus-gene-1.5") HSP 1 Score: 73.1738 bits (178), Expect = 1.764e-19 Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 0 Query: 1 MLLAMYYGCLYSRKKCNSAWRIEQELTRMNIRLKK 35 MLLAMYYGCLYSRKKCNSAWRIEQELTRMNIRLKK Sbjct: 1 MLLAMYYGCLYSRKKCNSAWRIEQELTRMNIRLKK 35 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000376 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000000376 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 12
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BLAST of EMLSAG00000000376 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000000376 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000000376 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000000376 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000000376 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1057:99555..102319- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000376-683142 ID=EMLSAG00000000376-683142|Name=EMLSAG00000000376|organism=Lepeophtheirus salmonis|type=gene|length=2765bp|location=Sequence derived from alignment at LSalAtl2s1057:99555..102319- (Lepeophtheirus salmonis)back to top Add to Basket
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