EMLSAG00000000457, EMLSAG00000000457-683223 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000457 vs. C. finmarchicus
Match: gi|592933649|gb|GAXK01024904.1| (TSA: Calanus finmarchicus comp579333_c0_seq2 transcribed RNA sequence) HSP 1 Score: 33.4982 bits (75), Expect = 9.027e-1 Identity = 22/58 (37.93%), Postives = 33/58 (56.90%), Query Frame = 0 Query: 312 SEQEVVD-PLIESIAQRKLPESHFHHKTDQNESTW-KKKSKSISQVMIDKEENLENGS 367 S+QEVV PLI S + LP ++F D E TW K + ++S I + +++E GS Sbjct: 258 SDQEVVAAPLIGSFTTKPLPPTNFKIGPDPFEITWMKSPTPNVSSYKI-RYKSVEEGS 428
BLAST of EMLSAG00000000457 vs. C. finmarchicus
Match: gi|592933648|gb|GAXK01024905.1| (TSA: Calanus finmarchicus comp579333_c0_seq3 transcribed RNA sequence) HSP 1 Score: 33.113 bits (74), Expect = 1.027e+0 Identity = 22/58 (37.93%), Postives = 33/58 (56.90%), Query Frame = 0 Query: 312 SEQEVVD-PLIESIAQRKLPESHFHHKTDQNESTW-KKKSKSISQVMIDKEENLENGS 367 S+QEVV PLI S + LP ++F D E TW K + ++S I + +++E GS Sbjct: 234 SDQEVVAAPLIGSFTTKPLPPTNFKIGPDPFEITWMKSPTPNVSSYKI-RYKSVEEGS 404
BLAST of EMLSAG00000000457 vs. C. finmarchicus
Match: gi|592933650|gb|GAXK01024903.1| (TSA: Calanus finmarchicus comp579333_c0_seq1 transcribed RNA sequence) HSP 1 Score: 33.113 bits (74), Expect = 1.177e+0 Identity = 22/58 (37.93%), Postives = 33/58 (56.90%), Query Frame = 0 Query: 312 SEQEVVD-PLIESIAQRKLPESHFHHKTDQNESTW-KKKSKSISQVMIDKEENLENGS 367 S+QEVV PLI S + LP ++F D E TW K + ++S I + +++E GS Sbjct: 352 SDQEVVAAPLIGSFTTKPLPPTNFKIGPDPFEITWMKSPTPNVSSYKI-RYKSVEEGS 522
BLAST of EMLSAG00000000457 vs. C. finmarchicus
Match: gi|592933646|gb|GAXK01024907.1| (TSA: Calanus finmarchicus comp579333_c2_seq1 transcribed RNA sequence) HSP 1 Score: 32.7278 bits (73), Expect = 1.975e+0 Identity = 22/58 (37.93%), Postives = 33/58 (56.90%), Query Frame = 0 Query: 312 SEQEVVD-PLIESIAQRKLPESHFHHKTDQNESTW-KKKSKSISQVMIDKEENLENGS 367 S+QEVV PLI S + LP ++F D E TW K + ++S I + +++E GS Sbjct: 168 SDQEVVAAPLIGSFTTKPLPPTNFKIGPDPFEITWMKSPTPNVSSYKI-RYKSVEEGS 338
BLAST of EMLSAG00000000457 vs. C. finmarchicus
Match: gi|592933644|gb|GAXK01024909.1| (TSA: Calanus finmarchicus comp579333_c2_seq3 transcribed RNA sequence) HSP 1 Score: 32.3426 bits (72), Expect = 2.007e+0 Identity = 22/58 (37.93%), Postives = 33/58 (56.90%), Query Frame = 0 Query: 312 SEQEVVD-PLIESIAQRKLPESHFHHKTDQNESTW-KKKSKSISQVMIDKEENLENGS 367 S+QEVV PLI S + LP ++F D E TW K + ++S I + +++E GS Sbjct: 177 SDQEVVAAPLIGSFTTKPLPPTNFKIGPDPFEITWMKSPTPNVSSYKI-RYKSVEEGS 347
BLAST of EMLSAG00000000457 vs. C. finmarchicus
Match: gi|592933645|gb|GAXK01024908.1| (TSA: Calanus finmarchicus comp579333_c2_seq2 transcribed RNA sequence) HSP 1 Score: 32.3426 bits (72), Expect = 2.099e+0 Identity = 22/58 (37.93%), Postives = 33/58 (56.90%), Query Frame = 0 Query: 312 SEQEVVD-PLIESIAQRKLPESHFHHKTDQNESTW-KKKSKSISQVMIDKEENLENGS 367 S+QEVV PLI S + LP ++F D E TW K + ++S I + +++E GS Sbjct: 178 SDQEVVAAPLIGSFTTKPLPPTNFKIGPDPFEITWMKSPTPNVSSYKI-RYKSVEEGS 348
BLAST of EMLSAG00000000457 vs. C. finmarchicus
Match: gi|592846178|gb|GAXK01111366.1| (TSA: Calanus finmarchicus comp53366_c5_seq2 transcribed RNA sequence) HSP 1 Score: 31.5722 bits (70), Expect = 5.258e+0 Identity = 14/39 (35.90%), Postives = 22/39 (56.41%), Query Frame = 0 Query: 191 INSEKEVHFNIGNEVTVTEPYEMDITKMSKNHGNICNKE 229 +NS FN +E +T PY DIT S+NH + +++ Sbjct: 521 MNSMSRKTFNFSSEKAITFPYRKDITFPSRNHIDFASRK 637
BLAST of EMLSAG00000000457 vs. C. finmarchicus
Match: gi|592935579|gb|GAXK01022974.1| (TSA: Calanus finmarchicus comp1578537_c1_seq1 transcribed RNA sequence) HSP 1 Score: 30.4166 bits (67), Expect = 5.539e+0 Identity = 16/55 (29.09%), Postives = 30/55 (54.55%), Query Frame = 0 Query: 305 EKDIRLYSEQEVVDPLIESIAQRKLPESHFHHKTDQNESTWKKKSKSISQVMIDK 359 EKDI + ++ E +P ++ ++ + + K Q + W+K SK+ QV +DK Sbjct: 178 EKDISVKAKTEAANPYLQFLSDSRRKANGVPLKLKQLQDDWRKMSKAEKQVHVDK 342
BLAST of EMLSAG00000000457 vs. C. finmarchicus
Match: gi|592846179|gb|GAXK01111365.1| (TSA: Calanus finmarchicus comp53366_c5_seq1 transcribed RNA sequence) HSP 1 Score: 31.5722 bits (70), Expect = 5.954e+0 Identity = 14/39 (35.90%), Postives = 22/39 (56.41%), Query Frame = 0 Query: 191 INSEKEVHFNIGNEVTVTEPYEMDITKMSKNHGNICNKE 229 +NS FN +E +T PY DIT S+NH + +++ Sbjct: 521 MNSMSRKTFNFSSEKAITFPYRKDITFPSRNHIDFASRK 637
BLAST of EMLSAG00000000457 vs. L. salmonis peptides
Match: EMLSAP00000000457 (pep:novel supercontig:LSalAtl2s:LSalAtl2s106:521565:523075:1 gene:EMLSAG00000000457 transcript:EMLSAT00000000457 description:"maker-LSalAtl2s106-augustus-gene-5.11") HSP 1 Score: 866.3 bits (2237), Expect = 0.000e+0 Identity = 421/421 (100.00%), Postives = 421/421 (100.00%), Query Frame = 0 Query: 1 MERSKKRRSSILKSNNNDQTLRSENTVTSRRVSFSRSKNVQEYIIGNPPAESTYVEPYTHDISSLRHTEDEDSKALSLPSSIDDEQSFCNKSIIYSPSHSDEPHGNGTLHQTADMDMTVFMSDTSDDQNDIENLIEQKANESFYKLFKEDSNNTMCHSTRMDMTVFQSNESKEENIESLIQEKXEESFALINSEKEVHFNIGNEVTVTEPYEMDITKMSKNHGNICNKENIHLKYQEETKEKKTSSNNKTLRQSIDMDFTVLKGNGDRGGKRNYNKPNNKNCTINVGVEMDLTTNECVMFEDPIEKDIRLYSEQEVVDPLIESIAQRKLPESHFHHKTDQNESTWKKKSKSISQVMIDKEENLENGSAKKYANPHKKRCLDYEVYDKENLHRTTQKEGNVYKKSIDKTIRQSMDMEFTVTN 421 MERSKKRRSSILKSNNNDQTLRSENTVTSRRVSFSRSKNVQEYIIGNPPAESTYVEPYTHDISSLRHTEDEDSKALSLPSSIDDEQSFCNKSIIYSPSHSDEPHGNGTLHQTADMDMTVFMSDTSDDQNDIENLIEQKANESFYKLFKEDSNNTMCHSTRMDMTVFQSNESKEENIESLIQEKXEESFALINSEKEVHFNIGNEVTVTEPYEMDITKMSKNHGNICNKENIHLKYQEETKEKKTSSNNKTLRQSIDMDFTVLKGNGDRGGKRNYNKPNNKNCTINVGVEMDLTTNECVMFEDPIEKDIRLYSEQEVVDPLIESIAQRKLPESHFHHKTDQNESTWKKKSKSISQVMIDKEENLENGSAKKYANPHKKRCLDYEVYDKENLHRTTQKEGNVYKKSIDKTIRQSMDMEFTVTN Sbjct: 1 MERSKKRRSSILKSNNNDQTLRSENTVTSRRVSFSRSKNVQEYIIGNPPAESTYVEPYTHDISSLRHTEDEDSKALSLPSSIDDEQSFCNKSIIYSPSHSDEPHGNGTLHQTADMDMTVFMSDTSDDQNDIENLIEQKANESFYKLFKEDSNNTMCHSTRMDMTVFQSNESKEENIESLIQEKXEESFALINSEKEVHFNIGNEVTVTEPYEMDITKMSKNHGNICNKENIHLKYQEETKEKKTSSNNKTLRQSIDMDFTVLKGNGDRGGKRNYNKPNNKNCTINVGVEMDLTTNECVMFEDPIEKDIRLYSEQEVVDPLIESIAQRKLPESHFHHKTDQNESTWKKKSKSISQVMIDKEENLENGSAKKYANPHKKRCLDYEVYDKENLHRTTQKEGNVYKKSIDKTIRQSMDMEFTVTN 421 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000457 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000000457 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 9
BLAST of EMLSAG00000000457 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000000457 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000000457 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000000457 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000000457 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s106:521565..523075+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000457-683223 ID=EMLSAG00000000457-683223|Name=EMLSAG00000000457|organism=Lepeophtheirus salmonis|type=gene|length=1511bp|location=Sequence derived from alignment at LSalAtl2s106:521565..523075+ (Lepeophtheirus salmonis)back to top Add to Basket
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