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Associated RNAi Experiments
Homology
BLAST of EMLSAG00000000462 vs. C. finmarchicus
Match: gi|592800718|gb|GAXK01153850.1| (TSA: Calanus finmarchicus comp6044783_c0_seq1 transcribed RNA sequence) HSP 1 Score: 30.0314 bits (66), Expect = 1.402e+0 Identity = 15/45 (33.33%), Postives = 27/45 (60.00%), Query Frame = 0
Query: 55 EDTEQLLSYSIPEKVYMESE-VEPPSYPRMRRGSSSNFFGLSGPI 98
+DT L S I + + + S+ ++PP+ P + R SS N ++GP+
Sbjct: 3 QDTSALFSIHIHQFIIIGSQPLQPPNNP*LIRCSSYNTLSIAGPL 137
BLAST of EMLSAG00000000462 vs. L. salmonis peptides
Match: EMLSAP00000000462 (pep:novel supercontig:LSalAtl2s:LSalAtl2s106:614656:623610:1 gene:EMLSAG00000000462 transcript:EMLSAT00000000462 description:"augustus_masked-LSalAtl2s106-processed-gene-6.0") HSP 1 Score: 271.552 bits (693), Expect = 2.314e-94 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0
Query: 1 MIIAEEGIRGNEESDEGNQLAKRMVSYSIFIVILGGLFLLEGFQCYNEEQKAPLEDTEQLLSYSIPEKVYMESEVEPPSYPRMRRGSSSNFFGLSGPIFGPRKSRENPVSMFRLKKSSSSSYIPEQPMDKRMSMIR 136
MIIAEEGIRGNEESDEGNQLAKRMVSYSIFIVILGGLFLLEGFQCYNEEQKAPLEDTEQLLSYSIPEKVYMESEVEPPSYPRMRRGSSSNFFGLSGPIFGPRKSRENPVSMFRLKKSSSSSYIPEQPMDKRMSMIR
Sbjct: 1 MIIAEEGIRGNEESDEGNQLAKRMVSYSIFIVILGGLFLLEGFQCYNEEQKAPLEDTEQLLSYSIPEKVYMESEVEPPSYPRMRRGSSSNFFGLSGPIFGPRKSRENPVSMFRLKKSSSSSYIPEQPMDKRMSMIR 136
The following BLAST results are available for this feature:
BLAST of EMLSAG00000000462 vs. GO
Analysis Date: 2014-04-02 ( Blast vs. GO)
Total hits: 0
| Match Name | E-value | Identity | Description | |
|---|
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BLAST of EMLSAG00000000462 vs. L. salmonis peptides
Analysis Date: 2014-05-10 ( Blastp vs. self)
Total hits: 1
| Match Name | E-value | Identity | Description | |
|---|
| EMLSAP00000000462 | 2.314e-94 | 100.00 | pep:novel supercontig:LSalAtl2s:LSalAtl2s106:61465... | [more] |
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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s106 | supercontig | LSalAtl2s106:614656..623610 + |
Analyses
This gene is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Description | augustus_masked-LSalAtl2s106-processed-gene-6.0 |
| Biotype | protein_coding |
| Evidence | IEA |
| Note | Hypothetical protein |
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s106:614656..623610+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAG00000000462-683228 ID=EMLSAG00000000462-683228|Name=EMLSAG00000000462|organism=Lepeophtheirus salmonis|type=gene|length=8955bp|location=Sequence derived from alignment at LSalAtl2s106:614656..623610+ (Lepeophtheirus salmonis)
ATGATCATCGCAGAAGAAGGTATTTCAAAAGGAGTAAAAAAAAAGACAAA
ACCTCTCACGTAAGCAATAAAATTTTCTTAGGTATAAGAGGAAATGAAGA
ATCAGACGAAGGGAATCAGTTGGCTAAAAGAATGGTATCATACTCGATAT
TTATCGTTATCTTGGGTGGGTTATTTCTATTGGAAGGYTTTCAATGCTAC
AATGAGGAACAGAAAGCACCACTAGAGGACACTGAACAGGTATGAGAAGA
ACCTCATTGTTCGTTTTAGGGGGGAGGGGGAGCACAGAGCCCAGATCCCA
GCATGGGATATAATGTTGTAAAAGAATTAAAAATTATACATTAGATTTTT
TTTTAAGACTAGGAGAATGATTAAAAATGTTTGTCTAATAAAATATAATT
TAATAAATAAAAATATTTGCTTGAGAAAATGTCGTTGAACAAAATGTGAC
AAAATTTATTGAAAACTATCGTAAGAAGGATTGGCCTTTCGTAGAAAAGG
TCATAAATGAAATAAAACATTCTTTTCTCGAAATAAATTTGTTGTTATTA
AAAAAAGGGCATTAGAAACAAAACAAAATTATGGTTCTTTAATTAATCTC
TAAAAAAATTACGAATCCATTTCTTACCAAACTGTTAGAAAGAGTCCTAC
TAGTCATATATATCCTAATAAGTCTTAGGGGGGGGGGGGGGTGTACTTGC
TCTAGCCCATCACAATGGATATAGTTTTGTAAGAATTGTATAAATATTTT
TTTMTTCAAAGACGTCAAAATAGAAAAATAATTATTAACCTTTGATTTAA
AAAAAGTAATTTTATAAAWWAAATTATTTATAAAGGAAACGTCATTAAAN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGATTTGGCATT
TAAAAAAATAGGTAATTGATAAAATATAACATTCTTAAGTTGAAGGATTT
TTTAAAATAATATATATTAATATAAAGGATAATTTAAAACAAAAAAAGAT
CCTTAAAAAAGAATCACAGATCCATTTCCCACATAATTACTTCGAGAATT
GAGAGAGATCCTAATCAGGGTTGGGTTTAGGGGTACTTGTCTTAGTCCCC
CACATTTGAAATAACTTAGTAAGTATTGAAATGTATATATATATAGGTTT
GTTTTTTTTAAATTGAATTATAATTTAACAACTTTTCTTAAAAAAGTGTT
ATAAATATAATATGGCATATGTATCTCAAAAATATATTTTCTTATAAAAA
AAAAGATCATTTGAAATAAAAAAGACTCAGTGTTCTTTTATGTAACTTGA
AAAAAAAAAAAAATGCGCACCCATTTTGCACAAAATTGAGACAAAAAGTG
ATAGAAGAATTTACCAGGCCCAGTTTTGACTGGACATAATTTTGTCAAAA
TCAAATATATTCATTATCTTTTTTTTTTTTAATTAGAAAAAGGATTGACC
TTTGTTGAAAATAAAAAAGATCATTTTAATAAAAGAAATAAGTATTATTT
TATTTAAAAAAAACATCACAAAATTAAACAATCCTATAAAAAGGCTGGGG
GGTTGTGTAAAAAATGCCATTTAAAAATAAAATTTAACTTTTTTTTGCCC
CTGAATTGAGCGCCCGACATTTGTATTTTCTAACTGAGTGTAAACTTTTT
TTTAAAGCTTTAAAAAAAGGAAGGCATTAAAGGACACCACATTTATTCCT
GTCCCAGGTTATGCCCACGATAAAACCGACTCTGGACCTGACACATTGTT
ATTTAATTAATCTCGTAAATAAAATATGGATCCATTTCACATAGAACTGT
GAAAAGAATCCAAAGAGGGCCTTATTGCAGAAAAAACAAACAAAAACCGC
CCTTTGAACAATCAATTACGATAATTAAGGCGTTGGTACAAATACACATA
ACATACTTATTTAGAGTATAAAAATCATATAAAAAATTGTAAATATATCA
TCATATTTATTCTTGTATTTAGCAAGAAAGTTTGACAAAAAAATATTTTC
AAATTGTCGATATTTGTTTGTGCAAACAACAATACTAGTACTAAAACAAA
CATTGTCGTATTTACTTATATATAAGTGATTTTTGACTTTTTAGCACATT
ATCACACTTGTTTTAACCCGTAAAACTTGTCTTTTTCTTTAAGGTGAAAA
AAATGTATTAGTTGAAAAATGTTGCCGAAGAGGCCTTGTAAATTATTGTT
GAAGCAGTAAAAAATTGAAATTTACCATTTGAATAATTTTTTTTCGAATT
TTCAAGATAAGAAAGAAGTTTTCAATATATATATCTATATAAACACAGTC
AAACTTGGGTAGAATAAGTCTGTATATAAGAATAATAAACCATTTTCTTG
TAAAAAATAAATATGTACATTCCATAAGAGAAATATGGAGTCAAAAATCT
GCATAGAATCCAATTTTTCTTCAGTTTTTTTTTTTTTTTGTGATCAAACT
TTTAAGAATTTCATATATTGAATATTGATGATTTTTCATTTTTATTGGTT
TCAGCTGTAAGTTGGCGACAACATTTAATCGTTCTATGTTTCTTTTTAAT
TCATATGACATTGCTTTTCAATCAATACAAATCAGGGGGTATGCAGAAAT
TATATTTTTGGCGGAGGCTTGGTTTTTGGAATTTTTTGAAAAAAAAGAAA
AATTACAAAACTTAAAAAATATCGAAAATAATTTAAAAATCCATAGCTAT
TCAAAAAAAATTAAATTTTTTGGGAAAAATTTAAAATGTAAATTTTTCGG
GAGAATAATTTCAAATATGGAATATAATTTGTTTTTCCAAAATCATTAGC
TTCTCACCAAAATATTACATTTTTTTCTATCTTGCATAATTTGGCCGAAT
GACGAAAAAATATTCTTAGAAAAAGCAAAAATGCCCCCCTATTTTTAGCA
ACAAGCCACCCTCTGCAGACACCTTTTCAGATATACATATTATGCGTGAC
ACCCGAAAAACACATTGCTGAAGGATAAGCATTAAATCCTTCATGATTTG
TCAAAAACAGCATCTAATAAAACACGGGTTCACTCGAAATGGGGAGTTTC
AACCTAACTTATTTACATAAGAACCGAAAAATTCAAGTTTTATACTTACT
TATAATTTATTCTTTTTAAAATCTAGTCAACTTTCATTTGAAAAAGAGGT
TTTTTTTTAAAATCCAGATTTGACAATATACCTATCAAATAATGCCTCAA
AATTCCATTTTAATGACTAAATTATAAAAATCTACGATCTTAAAAAAGGT
GATTGCCTTTTTTCAGTTGTACGTGACATGGAAGATACTAATTATCTATT
TAGCGTGTGTGCTTAGGGCCAGAGTGGTTGACATTAATGAATTCGGGAAA
AATAGGATATTAGTCGGAAAATTCGAACAATATTGCCTTCTAAACAAACG
TAATCAATGGAAATATGGATACAATTGATTAAATATGGCCATAACAAGGC
TTGGTCTTTTGTAAAAAGGGGATTCTATAAATAGGATATTTGATATTATT
TTCTAAGAATAAACGTTATTCGCTAAATATTACTATAAAAATTTACTAAA
ACATAAGTCTATTAGAGTAAAAAAATGGGCCGGAAAGTGGGAAAAAAGAC
ATTAACCATTGGGTTCGTGATCCCCTTTTTATCATAAATACAATGAAATA
GCTGATATTAATATAATCTTCTATTTCATAGATGAAAAGTTGACTATATC
TGGATTTTTGTTATACCTGAAGTATATAAAATAAACCCACCATTTTTGCA
TACTTATTTAAATATATAATTTTGAAACATACCCCCGTTTCTAGGCAACG
TGTGTTTGATTTGATCCTGTTTTTGACAGATCCTCCATGATTTAAGCTTA
TCTTTCGGTGAAAGTATTTTTCGGGACAATATGTATCCTTATTGATTGAA
GTATAATGTGAAACAAATTAAAAAATAAATTTTCAGAACCTAAATGTTGG
TGCTAGTATATTATTTGTACCTCTAAAAAGATAAAATAGTCATGGAATTC
ATCATTCTTAAGATTTCTAAGAAGTTGATAAAAGAAAAAAAAAGTTGACT
TTATGAAGATTTTTTACTTTGTGTTTCTTCCTTACAAAGTATTTTATGTA
GTAAAAATGGGGGTACCTTGTATAAGTCTGCCCGTACATCATTTCTTTAC
ATTGTCTCTTTCTATCCCCAAATTGGAGACCGCGATATAGGGGCGTTGTC
AGAATTATATATATATATATTATTTTTTTTTTTGAGGGAGGGCTTTATAT
TTGAAATTTTGTTGAAAAAAAATGCAAGACTTTCAATAACTCATAGTTAT
TGATAAAAAATAATTAAAAAAAAGAAAAAAGAAATTCAAAAATTAAATAA
TTTAGAAAAAAATTTCCAAAATTGAATTTCAGATTAAAAATTTTTAGGAA
AAAAATTTCAAAAATACATAGATACTCACAGAAAATTAATTTTTTATGGG
AAAAAAAGTCAAAAATCCAATTTCGGAGAATCATGAAAGTAAATGGAAGG
TTATGTAATTATGTGGATTAGGGAGTAAGTTTATCTCGTATTAAGTATTC
TGGGGGAGGGGGACTTGGAGTCGATTCGTTGACATAAGAATGAGGAGATC
ACATCTCATTAAGGAAAACTCAACGACTTTTTCTTGTATACACCATGAAC
CAATACAGTATAATTAAAGTATGAACATGAATTAAAGTATCCTGAAGATG
AGCTTCTCAACTATTCAAGCAATTGTGATTGATTGAGTCGAGATCCCTCT
CTTCCCATTCCAATAATAAATTCTTCGTTTTGTAAAGCGTTGCTTCACTC
CACATAGCAAAATTATTTCATTATTATTAAATGGCTGTGATAATTGAATT
ATCAACTGACGCGCTGTGTCCAATTTTGAGATAGAAACTTCGTGCTAACT
ACCAAAAGGTACCCAAAAATGGTATCTCAGAGAACGTTGACTCTAAGCGT
ATTTTTACTCAATCGGGATTAGACTCTACAAATACCTATATTTATTTAAA
TAATTACATCACGTTTTCATATTTTTGGGACTAAGCTGCCCCCAAATCAA
AGCTAGCATTACCTCTGATTCTAGCGACGGTCCTTTGCGTACTGATACCA
CATCATACTAATAACTACTCACACCAACAAAGTTGCAGTTTGACAGATTT
TCTTTGAATATTATTGTATATGAAAAAGGGGTTTTGTTTTATGCTTCATA
ATTGCAAGTAAAAACATTTCAGGGCTAAGTAATGAATGGAAATTCTTTGT
TCGGAAAAGATGAATGGGAAAAAAAGGAAGAAGGGATTTATTTTTTTATT
CTTGTGGTCTAAAGGTTGTCAGTCAACCTTTCAGGAACTAATGATGAAGG
TTCAATGAATGAAGATTTTTGATATATTTATTTTTTTAAAGAAAAAAAAT
GAAACAAATTATTGCAAAATGTGGGATTATGAAGTTAATTTTTGTTTCTG
TATGAAGAAGCATTATTAGAATTTGAAAAAATATTTATTATTATTTTTAT
TCATGTGCATAGATAGCAAGGTAACCACATTCGTAATCTTTAATCAATAT
TGTCTTTGATATAGGCATATATTAAAAAAAAAGAAAACACAAGTACATTA
TTGAAATTACAATTTTTTTGTAAGAAGATTAACAATTTACAACTGGAATT
ACACATTACAAGGAATGCATTGATTATTCGGCTACTCATAATCAATTTGC
TAATTAATTAGTAAATAGAAATCAAGTTTTTTTTTGGCTTAGCTTAAAGT
TGTAACATGTATCACCTTTGCAATTGCAACCTGAAGTTTAATATTTCCAA
AGTTATCAATTATTGAGGAAGGATCATCCATGAAATCTTAGATACATGGC
AATATATCCACGTCATTTTAATTTCCTTTTCTTCTCCACTTGAGTCGGGT
ATCCAGAAGTGTTTGGCGTCAGTTAAAAAACCCATTGGTCAATAAACTAA
TTGTTCTAAGGCGGAGTGTCCTTGTTACGATCCACGTAGGACGAGATAAG
CTTCATATTATAAACTTCCTAAACCTGGAATAGTCCTTTGTCTGGTGAGT
CAGGAAGGAACTGAAAAAGTCTGGAGGTGATGATGCATTTTCAGCAAAGC
TTGCTTGTCAAAAGAGGAGGTCAGACTGTCAGAGGGATCTACGTGTTTCA
CTGGACTCCCACATCCTCCTTCTCAGAAACATAATTCAATTCGCCACTGT
TGCTGTCGTGTTGTTAACAAAGAAACATTCCTAATATTTATTTCTTTTTT
TTATAAAATAAGAATCACAAGTATATCTACTTAAACTTTTTGAAGACTAA
GTTACTGTAATGGAAACAGAAGGAGTTTCAGGGATCCCTCTCTGCTTTCA
ACAAGATGAAGCACCTGACCACACTGCCAATATTATCATAGTGTGGTTTG
TATCACATTTTGAAGTCTTTTTCGCATCTATTTTTTTTCTTTCCTGATAG
CAAATTTCTGAAATTTGCTTTCTATGACAAGGGATGAATATTTATAACAT
GTAAAAAGGGGAAGAATCAAAATATCCCGTCCATAATGATAGATATACCA
CAAATACCTCTTTAAAAAATAAATATAGATCCAAATACTGAAAGGTTCCC
GTTTTTGCGGGTAATTTGTGTCTATTTTTTCGTACATGTTCTGGCTAAGA
GTATTAATCATACAAATCCTTAGTGGAAGAAGAAAGTCAATCCTGTTTCA
ATAATCAGAAAGGATTGCCTAATGGCAACTACAACGACTGTTTGGTATTA
TAAATGTGTACCTTTAAATATTTATTTATGTGTATTAAGGGTTGGATAAA
TTTAAGAGGTCTCAAAATCTCTTTTAGAAAAATTTCATTTATAGGATTTG
GATAAATAATTATCTCCTAAGTACCAAAACCAACTACACCATTGGTAGAT
ACATAAAATATGTATACATATCAGAGTGGTACAATATATTTGACTTTTAT
TTTGTGAAATAATATTATGGTGCAAATAAATATCTTTTATATTTTAAAAC
ATGCGAGTTTTTTGCTACTTGACAATTTTTTATTTTAATACTTATTTCAT
TTTTTCCGATTATATACATATTTAAATTTCAATAATAAGATTTATAATAT
AAAACATACATATTATATATATTTATTTCTGAGTTGTTTTTTTCCAATGT
TTTTTTATAAATTTAAAATTACTTTTGATAACCTCTGGTCCATTCTCCCA
TTTTAGCTCCTGAGTTATTCAATCCCTGAAAAAGTATATATGGAGTCTGA
AGTTGAGCCACCTTCCTACCCTAGAATGCGTCGTGGAAGTTCTTCTAACT
TTTTTGGACTATCTGGCCCCATATTTGGTCCCCGAAAGAGTCGCGAAAAC
CCGGTCTCCATGTTTCGTCTCAAGAAATCATCTTCTTCGTCTTATATCCC
GGAACAGCCCATGGACAAACGAATGTCTATGATACGGTAAGGGTCCAGCC
CATATAATTTGTTTTTATGTTTATGTAATTTGAAATAGGTTAAAGAAAAA
CCTAAGGAAATTGCATTCCAATGTTTCCATGCTACGACTTCGAAAAAGAA
TTTCCCAAATGAGGTTAAGGAAGCGCTTTTTGGAGGATCATGATAATTGT
GAAGGAGACAGAAAATGCCTAGGGGTAATAGAAGAGGTAAGAATGATCCC
GGATTAAATGATATATATGCGTCAGGCTTGAGTATGTTCACGCTTTTTGC
GTTCATCTATTTTTTCTGAAAAATTTCGTTCATGCACTCATTTGTAAATT
TCTTTCAATTCATTTTTTTTTTTGAATAAACGAATCGACAACCAAGTTAT
CTATCAATTTTTGTTCAAATTGAATCCGCTACAAAAATCTTTTTGATGTA
CTACAGATAACATCACTTTATCGTTGTCTTATCTGACGTATTAAACTTTT
CCTCTTTTCGGAAAATTGATATTGTTAGTCCATGGAGGTTACGTTGTTAT
GCGTAGAGTGCTTATGACGTGACCAGTAGTTTTACCGGCTATACTTTTGC
CTCTGGAAGATTTTGCCGCATTACATATTCGCCGTCTATTATGTGTTTAT
ATTCTCGGTTTGAACTTAACTGCTGTATCTCGATTAAATTAATTATATAG
CTACGAGAAAAGAAAAAGAAAAATAGTGATGAAATAATTAGTCCAACAGT
AAAGTTCGAGCCGATAACGTAAAAACAGTAAATGGCGGCGAATATGTCAT
GCGGCAAAATGTTTGAGGCAAGATTATCTAGAGCCATTTATGATACACTC
AGTGCACCTAGTGGATAAATAACAATTCTTGTAGCCAATATAATTAGGAC
AGACATTAATCATTGTTTGGTCACTAGTTTTTAAAGCTTTGGTATGGAGG
AGAAAGATTTCTTTCGATAGTAATGAAAAAAAATGAGCAAGGAAATGAAC
GGAGCTCATTATTCAATCAATATGCAAGCCTGATAAGAATATATATATAT
ATTAAAAGAACCATGCTAATAAAAATGTTGCACTTTCAGAACCGAAATTC
CAAAAGGACAATTGAAGAGCCTGAGAATCTATATGGACTCATGGACTATG
AATCATTAAAAAAATAAAACAATATATACCCGTTAATTATTTAACTAACT
ATAAGTAATCATCTTTAGGGGTATAATCCAATTAAATATAATATATAAAA
AAATAAATACAAATAAATTCCGGGGAGGCATTTTTTCCAATTTTTCTTAT
TTTGCTTGCCACCATTTTTTTCGTTTTAGCTCCCTTTTTAAAAAAGAGAG
TTTTAATAGCCTAATCCCAATACTTTTTTACTACCCAATATCTAATCTTT
TTTCTTAGAGAGGCAATGACATAAGTGTTGTGTATTTTTTTAATTTTTAT
TTGGGAGGGGTGAATGAATTGAAATATTACATATTCATCTGTTATTCTAT
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