EMLSAG00000000523, EMLSAG00000000523-683289 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000523 vs. C. finmarchicus
Match: gi|592865652|gb|GAXK01091910.1| (TSA: Calanus finmarchicus comp76705_c0_seq2 transcribed RNA sequence) HSP 1 Score: 98.2117 bits (243), Expect = 2.958e-20 Identity = 62/169 (36.69%), Postives = 87/169 (51.48%), Query Frame = 0 Query: 42 EAIESLLLLGQEPILAPK-----KLELDSL---EFSPSSCSITGADGISYYQRMRIRNNEASKRCRLKRRLKAEQLESQNNLLTMSNKLLKQRILRLNKICHLLKD---CVNDFKXXXXXXXXXXXXXNPSKCSCFETVXAIKKFNRDTPDSTSLSNEELLAKSKLDRE 199 +A+ESLLLLGQ P+ + K++ D + F S + ++YYQ+MR RNNEASKRCRLKRR+K + LE +L + L R+ +L+KI +L D C+ + C C + IK NR+ PD LSN L+ KSKL R+ Sbjct: 244 DAVESLLLLGQRPVFTLQESQDIKIDGDQILKGNFPKFSNQVEQRMMVNYYQKMRERNNEASKRCRLKRRIKQDSLEKTRMMLESHREALGHRVAKLHKIKQILSDACRCIG---------------KDDKGCECLDYCAMIKAANREMPDLLDLSNNRLIKKSKLARD 705 HSP 2 Score: 85.1149 bits (209), Expect = 2.975e-16 Identity = 55/121 (45.45%), Postives = 70/121 (57.85%), Query Frame = 0 Query: 382 CGNELHSINKLTGYLDLTMRTFSRDDGTSAAERVIIKSALGLPFWQADELPSFICDNHRQEISFQTEHLSCVICGKKKKKPFSTPMSIITYRMSLEHHMNTGKILAIGQLICSICKDRYLK 502 C EL +N LT LDL +AAE+ IIKS L + FW+A+E SFIC +HR +I + SC +C KKK K M ITYRM++E +M G+ LAIG L CS CK + LK Sbjct: 1513 CSKELLDLNSLTQTLDLVNLEPKMAGELTAAEKYIIKSRLEIEFWKAEESASFICSSHRHKIVHNSNMQSCSVCSKKKSKKLD--MYFITYRMAVEFYMTNGRFLAIGLLACSNCKIKSLK 1869 HSP 3 Score: 60.077 bits (144), Expect = 1.839e-8 Identity = 26/49 (53.06%), Postives = 37/49 (75.51%), Query Frame = 0 Query: 601 HKISRLNDALQAVNPRYRPIGFSITSIESCXPSVLQDAVXATDTAISTL 649 K +LN++L A NP Y+P+GF+I S+ SC SVL+DA+ AT TA+ST+ Sbjct: 2236 QKYQKLNESLAAFNPAYKPLGFTINSLSSCSESVLKDALLATRTAVSTI 2382
BLAST of EMLSAG00000000523 vs. C. finmarchicus
Match: gi|592865653|gb|GAXK01091909.1| (TSA: Calanus finmarchicus comp76705_c0_seq1 transcribed RNA sequence) HSP 1 Score: 98.2117 bits (243), Expect = 3.079e-20 Identity = 62/169 (36.69%), Postives = 87/169 (51.48%), Query Frame = 0 Query: 42 EAIESLLLLGQEPILAPK-----KLELDSL---EFSPSSCSITGADGISYYQRMRIRNNEASKRCRLKRRLKAEQLESQNNLLTMSNKLLKQRILRLNKICHLLKD---CVNDFKXXXXXXXXXXXXXNPSKCSCFETVXAIKKFNRDTPDSTSLSNEELLAKSKLDRE 199 +A+ESLLLLGQ P+ + K++ D + F S + ++YYQ+MR RNNEASKRCRLKRR+K + LE +L + L R+ +L+KI +L D C+ + C C + IK NR+ PD LSN L+ KSKL R+ Sbjct: 627 DAVESLLLLGQRPVFTLQESQDIKIDGDQILKGNFPKFSNQVEQRMMVNYYQKMRERNNEASKRCRLKRRIKQDSLEKTRMMLESHREALGHRVAKLHKIKQILSDACRCIG---------------KDDKGCECLDYCAMIKAANREMPDLLDLSNNRLIKKSKLARD 1088 HSP 2 Score: 85.1149 bits (209), Expect = 3.439e-16 Identity = 55/121 (45.45%), Postives = 70/121 (57.85%), Query Frame = 0 Query: 382 CGNELHSINKLTGYLDLTMRTFSRDDGTSAAERVIIKSALGLPFWQADELPSFICDNHRQEISFQTEHLSCVICGKKKKKPFSTPMSIITYRMSLEHHMNTGKILAIGQLICSICKDRYLK 502 C EL +N LT LDL +AAE+ IIKS L + FW+A+E SFIC +HR +I + SC +C KKK K M ITYRM++E +M G+ LAIG L CS CK + LK Sbjct: 1896 CSKELLDLNSLTQTLDLVNLEPKMAGELTAAEKYIIKSRLEIEFWKAEESASFICSSHRHKIVHNSNMQSCSVCSKKKSKKLD--MYFITYRMAVEFYMTNGRFLAIGLLACSNCKIKSLK 2252 HSP 3 Score: 60.077 bits (144), Expect = 2.067e-8 Identity = 26/49 (53.06%), Postives = 37/49 (75.51%), Query Frame = 0 Query: 601 HKISRLNDALQAVNPRYRPIGFSITSIESCXPSVLQDAVXATDTAISTL 649 K +LN++L A NP Y+P+GF+I S+ SC SVL+DA+ AT TA+ST+ Sbjct: 2619 QKYQKLNESLAAFNPAYKPLGFTINSLSSCSESVLKDALLATRTAVSTI 2765
BLAST of EMLSAG00000000523 vs. C. finmarchicus
Match: gi|592892712|gb|GAXK01065663.1| (TSA: Calanus finmarchicus comp4683_c0_seq1 transcribed RNA sequence) HSP 1 Score: 48.9062 bits (115), Expect = 4.600e-5 Identity = 22/55 (40.00%), Postives = 32/55 (58.18%), Query Frame = 0 Query: 84 YQRMRIRNNEASKRCRLKRRLKAEQLESQNNLLTMSNKLLKQRILRLNKICHLLK 138 Y++MR +NNEAS++CR+ R+ K + E LL N LK R+ + K L K Sbjct: 1373 YRKMRSQNNEASRKCRMNRKRKQQDAEEVFELLQERNTFLKSRLEEMEKEVKLWK 1537
BLAST of EMLSAG00000000523 vs. C. finmarchicus
Match: gi|592892710|gb|GAXK01065665.1| (TSA: Calanus finmarchicus comp4683_c0_seq3 transcribed RNA sequence) HSP 1 Score: 48.521 bits (114), Expect = 6.271e-5 Identity = 22/55 (40.00%), Postives = 32/55 (58.18%), Query Frame = 0 Query: 84 YQRMRIRNNEASKRCRLKRRLKAEQLESQNNLLTMSNKLLKQRILRLNKICHLLK 138 Y++MR +NNEAS++CR+ R+ K + E LL N LK R+ + K L K Sbjct: 1285 YRKMRSQNNEASRKCRMNRKRKQQDAEEVFELLQERNTFLKSRLEEMEKEVKLWK 1449
BLAST of EMLSAG00000000523 vs. C. finmarchicus
Match: gi|592892711|gb|GAXK01065664.1| (TSA: Calanus finmarchicus comp4683_c0_seq2 transcribed RNA sequence) HSP 1 Score: 46.595 bits (109), Expect = 2.150e-4 Identity = 21/55 (38.18%), Postives = 32/55 (58.18%), Query Frame = 0 Query: 84 YQRMRIRNNEASKRCRLKRRLKAEQLESQNNLLTMSNKLLKQRILRLNKICHLLK 138 Y++MR +NNEASK+CR+ R+ K +E + LL N LK R+ + + K Sbjct: 1370 YRKMRSQNNEASKKCRMNRKRKQGDMEEECELLQERNVFLKSRLEEMEREVKAWK 1534
BLAST of EMLSAG00000000523 vs. C. finmarchicus
Match: gi|592892709|gb|GAXK01065666.1| (TSA: Calanus finmarchicus comp4683_c0_seq4 transcribed RNA sequence) HSP 1 Score: 46.2098 bits (108), Expect = 3.036e-4 Identity = 21/55 (38.18%), Postives = 32/55 (58.18%), Query Frame = 0 Query: 84 YQRMRIRNNEASKRCRLKRRLKAEQLESQNNLLTMSNKLLKQRILRLNKICHLLK 138 Y++MR +NNEASK+CR+ R+ K +E + LL N LK R+ + + K Sbjct: 1282 YRKMRSQNNEASKKCRMNRKRKQGDMEEECELLQERNVFLKSRLEEMEREVKAWK 1446
BLAST of EMLSAG00000000523 vs. C. finmarchicus
Match: gi|592866245|gb|GAXK01091317.1| (TSA: Calanus finmarchicus comp261250_c1_seq1 transcribed RNA sequence) HSP 1 Score: 44.2838 bits (103), Expect = 1.062e-3 Identity = 26/85 (30.59%), Postives = 42/85 (49.41%), Query Frame = 0 Query: 58 PKKLELDSLEFSPSSCSITGADGISYYQRMRIRNNEASKRCRLKRRLKAEQLESQNNLLTMSNKLLKQRILRLNKICHLLKDCVN 142 P + DSL+ +P+ S S Y R +NNEA+KR R RR K ++ + + L N LK +++L ++D +N Sbjct: 309 PNNMHDDSLDMTPTHHSTPSNGKDSAYWERRRKNNEAAKRSRDSRRHKENEIAVRASYLEQENIQLKMELVQLRTELGSIRDQMN 563
BLAST of EMLSAG00000000523 vs. C. finmarchicus
Match: gi|592821382|gb|GAXK01133186.1| (TSA: Calanus finmarchicus comp27882_c0_seq1 transcribed RNA sequence) HSP 1 Score: 40.817 bits (94), Expect = 1.456e-2 Identity = 23/55 (41.82%), Postives = 31/55 (56.36%), Query Frame = 0 Query: 84 YQRMRIRNNEASKRCRLKRRLKAEQLESQNNLLTMSNKLLKQRILRLNKICHLLK 138 Y+RMR NNEASKRCR R+ K E++ + L NK LK + ++ LK Sbjct: 1602 YRRMRDLNNEASKRCRQTRKEKMASEETELSGLAERNKKLKAALTKMETQVMELK 1766
BLAST of EMLSAG00000000523 vs. C. finmarchicus
Match: gi|592789421|gb|GAXK01165147.1| (TSA: Calanus finmarchicus comp788256_c0_seq1 transcribed RNA sequence) HSP 1 Score: 40.0466 bits (92), Expect = 2.742e-2 Identity = 32/134 (23.88%), Postives = 55/134 (41.04%), Query Frame = 0 Query: 376 PYKEKPC----GNELHSINKLTGYLDLTMRTFSRDDGTSAAERVIIK---SALGLPFWQADELPSFICDNHRQEISFQTEHLSCVICGKKKKKPFSTPMSIITYRMSLEHHMNTGKILAIGQLICSICKDRYLK 502 PY PC G+++ + L D + FS T RV + S W IC++HR+ + + + + + P + M +T+ MS + G +L IG +C+ CK+ Y+K Sbjct: 393 PYLSTPCQILVGDDVIPLLSLDQPADTLNKKFSVPPSTVILSRVCVNYLSSKATFADWS-------ICNHHRKLLLDEWKPADYCCHHEHEDNPLNKKMGSVTFAMSKTILRSDGMVLPIGGTVCAPCKESYIK 773
BLAST of EMLSAG00000000523 vs. C. finmarchicus
Match: gi|592824401|gb|GAXK01130167.1| (TSA: Calanus finmarchicus comp71844_c0_seq2 transcribed RNA sequence) HSP 1 Score: 40.0466 bits (92), Expect = 3.003e-2 Identity = 24/61 (39.34%), Postives = 35/61 (57.38%), Query Frame = 0 Query: 82 SYYQRMRIRNNEASKRCRLKRRLKAEQLESQNNLLTMSNKLLKQRILRLNKICHLLKDCVN 142 SY+ R R RNNEA+KR R KRR M++ LL+ R++ L+K H+L+ +N Sbjct: 2145 SYWDRRR-RNNEAAKRSREKRR--------------MNDMLLETRVIELSKDNHILQAQLN 2282
BLAST of EMLSAG00000000523 vs. L. salmonis peptides
Match: EMLSAP00000000523 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1081:173370:176201:1 gene:EMLSAG00000000523 transcript:EMLSAT00000000523 description:"maker-LSalAtl2s1081-augustus-gene-0.34") HSP 1 Score: 1302.35 bits (3369), Expect = 0.000e+0 Identity = 649/649 (100.00%), Postives = 649/649 (100.00%), Query Frame = 0 Query: 1 MSKSSPMEIVNMMRASPSSVDNAYGRXXGASSSRSXDLSSQEAIESLLLLGQEPILAPKKLELDSLEFSPSSCSITGADGISYYQRMRIRNNEASKRCRLKRRLKAEQLESQNNLLTMSNKLLKQRILRLNKICHLLKDCVNDFKEDEEGEEEEAEEANPSKCSCFETVXAIKKFNRDTPDSTSLSNEELLAKSKLDRELEDMSEFYLDLDGRPSSSSDDEKKPKLTRSLSCQPVLNRTSLDAINETIVKTLKTPLVTLALTSAATRIQNSKPLSTNPPPGLISVTSPTVQNPKPAMSVSVKSPPSVITNNLQVIPPQLVFVTTKSPPPKTKEILIKCEPDLRVVEEVVETTAVPPPPLLTPSNSCLVMTTSNDNPYKEKPCGNELHSINKLTGYLDLTMRTFSRDDGTSAAERVIIKSALGLPFWQADELPSFICDNHRQEISFQTEHLSCVICGKKKKKPFSTPMSIITYRMSLEHHMNTGKILAIGQLICSICKDRYLKMEATLLNYSTNNQLKISSNLADTVPQIMGLRQNNTVIINKQKDVKVIVQPVPRITNFNSSTANSQLVSICNSSNSANEIVSSPTTSLVPTSCSNDNIFHKISRLNDALQAVNPRYRPIGFSITSIESCXPSVLQDAVXATDTAISTL 649 MSKSSPMEIVNMMRASPSSVDNAYGRXXGASSSRSXDLSSQEAIESLLLLGQEPILAPKKLELDSLEFSPSSCSITGADGISYYQRMRIRNNEASKRCRLKRRLKAEQLESQNNLLTMSNKLLKQRILRLNKICHLLKDCVNDFKEDEEGEEEEAEEANPSKCSCFETVXAIKKFNRDTPDSTSLSNEELLAKSKLDRELEDMSEFYLDLDGRPSSSSDDEKKPKLTRSLSCQPVLNRTSLDAINETIVKTLKTPLVTLALTSAATRIQNSKPLSTNPPPGLISVTSPTVQNPKPAMSVSVKSPPSVITNNLQVIPPQLVFVTTKSPPPKTKEILIKCEPDLRVVEEVVETTAVPPPPLLTPSNSCLVMTTSNDNPYKEKPCGNELHSINKLTGYLDLTMRTFSRDDGTSAAERVIIKSALGLPFWQADELPSFICDNHRQEISFQTEHLSCVICGKKKKKPFSTPMSIITYRMSLEHHMNTGKILAIGQLICSICKDRYLKMEATLLNYSTNNQLKISSNLADTVPQIMGLRQNNTVIINKQKDVKVIVQPVPRITNFNSSTANSQLVSICNSSNSANEIVSSPTTSLVPTSCSNDNIFHKISRLNDALQAVNPRYRPIGFSITSIESCXPSVLQDAVXATDTAISTL Sbjct: 1 MSKSSPMEIVNMMRASPSSVDNAYGRXXGASSSRSXDLSSQEAIESLLLLGQEPILAPKKLELDSLEFSPSSCSITGADGISYYQRMRIRNNEASKRCRLKRRLKAEQLESQNNLLTMSNKLLKQRILRLNKICHLLKDCVNDFKEDEEGEEEEAEEANPSKCSCFETVXAIKKFNRDTPDSTSLSNEELLAKSKLDRELEDMSEFYLDLDGRPSSSSDDEKKPKLTRSLSCQPVLNRTSLDAINETIVKTLKTPLVTLALTSAATRIQNSKPLSTNPPPGLISVTSPTVQNPKPAMSVSVKSPPSVITNNLQVIPPQLVFVTTKSPPPKTKEILIKCEPDLRVVEEVVETTAVPPPPLLTPSNSCLVMTTSNDNPYKEKPCGNELHSINKLTGYLDLTMRTFSRDDGTSAAERVIIKSALGLPFWQADELPSFICDNHRQEISFQTEHLSCVICGKKKKKPFSTPMSIITYRMSLEHHMNTGKILAIGQLICSICKDRYLKMEATLLNYSTNNQLKISSNLADTVPQIMGLRQNNTVIINKQKDVKVIVQPVPRITNFNSSTANSQLVSICNSSNSANEIVSSPTTSLVPTSCSNDNIFHKISRLNDALQAVNPRYRPIGFSITSIESCXPSVLQDAVXATDTAISTL 649 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000523 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000000523 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
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BLAST of EMLSAG00000000523 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000000523 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000000523 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000000523 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000000523 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1081:173370..176201+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000523-683289 ID=EMLSAG00000000523-683289|Name=EMLSAG00000000523|organism=Lepeophtheirus salmonis|type=gene|length=2832bp|location=Sequence derived from alignment at LSalAtl2s1081:173370..176201+ (Lepeophtheirus salmonis)back to top Add to Basket
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