EMLSAG00000000586, EMLSAG00000000586-683352 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000586 vs. C. finmarchicus
Match: gi|592907807|gb|GAXK01050568.1| (TSA: Calanus finmarchicus comp30484_c1_seq1 transcribed RNA sequence) HSP 1 Score: 90.8929 bits (224), Expect = 8.343e-20 Identity = 40/47 (85.11%), Postives = 44/47 (93.62%), Query Frame = 0 Query: 153 PSKRHRSTPRPHNIQRPCLDFEKMQQIKKRVVTSWRPKGTELSLFCW 199 P+KRHRSTP+P NIQRPCLDFEKMQQIK +VVTSWR +GTELSLFCW Sbjct: 2629 PNKRHRSTPKPQNIQRPCLDFEKMQQIKTKVVTSWR-QGTELSLFCW 2766 HSP 2 Score: 31.5722 bits (70), Expect = 2.423e+0 Identity = 15/25 (60.00%), Postives = 19/25 (76.00%), Query Frame = 0 Query: 1 MSLQFLAKKLEGQSLREEEIRCQKD 25 MSL+++ KKLE QSL EEE QK+ Sbjct: 3619 MSLKYVTKKLEDQSLEEEENLSQKE 3693
BLAST of EMLSAG00000000586 vs. C. finmarchicus
Match: gi|592869299|gb|GAXK01088263.1| (TSA: Calanus finmarchicus comp159677_c0_seq4 transcribed RNA sequence) HSP 1 Score: 60.077 bits (144), Expect = 7.905e-10 Identity = 32/47 (68.09%), Postives = 35/47 (74.47%), Query Frame = 0 Query: 153 PSKRHRSTPRPHNIQRPCLDFEKMQQIKKRVVTSWRPKGTELSLFCW 199 P KR R T R +IQRPCLDFEKMQQ++ R V SWR G ELSLFCW Sbjct: 855 PRKRSR-TSRVQHIQRPCLDFEKMQQLRARAV-SWR-HGGELSLFCW 986
BLAST of EMLSAG00000000586 vs. C. finmarchicus
Match: gi|592869300|gb|GAXK01088262.1| (TSA: Calanus finmarchicus comp159677_c0_seq3 transcribed RNA sequence) HSP 1 Score: 60.077 bits (144), Expect = 7.967e-10 Identity = 32/47 (68.09%), Postives = 35/47 (74.47%), Query Frame = 0 Query: 153 PSKRHRSTPRPHNIQRPCLDFEKMQQIKKRVVTSWRPKGTELSLFCW 199 P KR R T R +IQRPCLDFEKMQQ++ R V SWR G ELSLFCW Sbjct: 963 PRKRSR-TSRVQHIQRPCLDFEKMQQLRARAV-SWR-HGGELSLFCW 1094
BLAST of EMLSAG00000000586 vs. C. finmarchicus
Match: gi|592869301|gb|GAXK01088261.1| (TSA: Calanus finmarchicus comp159677_c0_seq2 transcribed RNA sequence) HSP 1 Score: 60.077 bits (144), Expect = 7.980e-10 Identity = 32/47 (68.09%), Postives = 35/47 (74.47%), Query Frame = 0 Query: 153 PSKRHRSTPRPHNIQRPCLDFEKMQQIKKRVVTSWRPKGTELSLFCW 199 P KR R T R +IQRPCLDFEKMQQ++ R V SWR G ELSLFCW Sbjct: 855 PRKRSR-TSRVQHIQRPCLDFEKMQQLRARAV-SWR-HGGELSLFCW 986
BLAST of EMLSAG00000000586 vs. C. finmarchicus
Match: gi|592869302|gb|GAXK01088260.1| (TSA: Calanus finmarchicus comp159677_c0_seq1 transcribed RNA sequence) HSP 1 Score: 60.077 bits (144), Expect = 8.037e-10 Identity = 32/47 (68.09%), Postives = 35/47 (74.47%), Query Frame = 0 Query: 153 PSKRHRSTPRPHNIQRPCLDFEKMQQIKKRVVTSWRPKGTELSLFCW 199 P KR R T R +IQRPCLDFEKMQQ++ R V SWR G ELSLFCW Sbjct: 963 PRKRSR-TSRVQHIQRPCLDFEKMQQLRARAV-SWR-HGGELSLFCW 1094
BLAST of EMLSAG00000000586 vs. C. finmarchicus
Match: gi|592804287|gb|GAXK01150281.1| (TSA: Calanus finmarchicus comp4992492_c0_seq1 transcribed RNA sequence) HSP 1 Score: 28.4906 bits (62), Expect = 8.518e+0 Identity = 12/28 (42.86%), Postives = 17/28 (60.71%), Query Frame = 0 Query: 45 EEEEVSYTGRRFELHRTIFRQFEDSSCT 72 E E VSYTG+ LH T + FE ++ + Sbjct: 45 ESEVVSYTGKNPSLHSTFSKHFEQTAAS 128
BLAST of EMLSAG00000000586 vs. L. salmonis peptides
Match: EMLSAP00000000586 (pep:novel supercontig:LSalAtl2s:LSalAtl2s109:177125:186965:-1 gene:EMLSAG00000000586 transcript:EMLSAT00000000586 description:"augustus_masked-LSalAtl2s109-processed-gene-1.7") HSP 1 Score: 407.527 bits (1046), Expect = 6.583e-146 Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0 Query: 1 MSLQFLAKKLEGQSLREEEIRCQKDREEDSGTESEDDEIGDDAVEEEEVSYTGRRFELHRTIFRQFEDSSCTPPPTGISSSNSLCSQNERSTCDIDDNYSSEEELKEIISEKQPPGFSGTSTSSTSVAAEKLIGDQSKRHHRRHSGDSRHYSPSKRHRSTPRPHNIQRPCLDFEKMQQIKKRVVTSWRPKGTELSLFCW 199 MSLQFLAKKLEGQSLREEEIRCQKDREEDSGTESEDDEIGDDAVEEEEVSYTGRRFELHRTIFRQFEDSSCTPPPTGISSSNSLCSQNERSTCDIDDNYSSEEELKEIISEKQPPGFSGTSTSSTSVAAEKLIGDQSKRHHRRHSGDSRHYSPSKRHRSTPRPHNIQRPCLDFEKMQQIKKRVVTSWRPKGTELSLFCW Sbjct: 1 MSLQFLAKKLEGQSLREEEIRCQKDREEDSGTESEDDEIGDDAVEEEEVSYTGRRFELHRTIFRQFEDSSCTPPPTGISSSNSLCSQNERSTCDIDDNYSSEEELKEIISEKQPPGFSGTSTSSTSVAAEKLIGDQSKRHHRRHSGDSRHYSPSKRHRSTPRPHNIQRPCLDFEKMQQIKKRVVTSWRPKGTELSLFCW 199
BLAST of EMLSAG00000000586 vs. Select Arthropod Genomes
Match: gb|EFA02204.2| (hypothetical protein TcasGA2_TC007862 [Tribolium castaneum]) HSP 1 Score: 57.7658 bits (138), Expect = 1.907e-9 Identity = 29/53 (54.72%), Postives = 34/53 (64.15%), Query Frame = 0 Query: 150 HYSPSKRHRSTPRPHNIQRPCLDFEKMQQIKKRVVTSWR---PKGTELSLFCW 199 HY S R RS R ++QRP LDFEKMQ +K R V +WR G ELS+FCW Sbjct: 208 HYEESPRKRSKHRHAHVQRPYLDFEKMQHLKARSVRTWRHSGDHGGELSVFCW 260
BLAST of EMLSAG00000000586 vs. Select Arthropod Genomes
Match: EAL39054.3 (AGAP009144-PA, partial [Anopheles gambiae str. PEST]) HSP 1 Score: 52.7582 bits (125), Expect = 1.911e-7 Identity = 22/36 (61.11%), Postives = 26/36 (72.22%), Query Frame = 0 Query: 167 QRPCLDFEKMQQIKKRVVTSWRPKG---TELSLFCW 199 RPCLDF+KMQQ+K R VT+WR ELS+FCW Sbjct: 381 HRPCLDFDKMQQLKARSVTTWRHSNEHSGELSVFCW 416
BLAST of EMLSAG00000000586 vs. nr
Match: gi|939262809|ref|XP_014251344.1| (PREDICTED: uncharacterized protein LOC106667730 [Cimex lectularius]) HSP 1 Score: 76.6406 bits (187), Expect = 9.461e-14 Identity = 77/237 (32.49%), Postives = 107/237 (45.15%), Query Frame = 0 Query: 3 LQFLAKKLEGQSLREEEIRCQKDREEDSGTESEDDEIGDDAVEEEEVSYTGRRFELHRTIFRQFEDSSCTPPPTGISSSNSLCSQNERSTCDID-DNYSSEEELKEIISEKQP-----------------------PGFSGTSTSSTSVAAEKLIG-------------DQSKRHHRRHSGDSRHYSPSKRHRSTPRPHNIQRPCLDFEKMQQIKKRVVTSWR---PKGTELSLFCW 199 L+FL KL+ SL E++ + +D + DSGTES DDE G +E E+S + T + S TP +S S CD D +SSEEEL E+I+ KQ PG T S+ + E+++G + HR +S SP KRHR+ P RPCLDFEKMQQ++ + +T+WR G ELS++CW Sbjct: 2 LKFLTHKLKTHSLNEDDPQKVEDDDHDSGTES-DDEHG--TSDEPEISMESEGGSV-VTALSRSRSSLLTP------ASPYFLDSALPSDCDQGYDQHSSEEEL-EVINCKQAKSHTGQEKRKWSQVTPENVGVRRPGRCRTEGGSSGSSDEEVVGLVAAMTAPVQFRTSPPRGTHRPYSAALHEASPRKRHRNAAPP----RPCLDFEKMQQLQAKGMTTWRHTGDSGGELSVYCW 223
BLAST of EMLSAG00000000586 vs. nr
Match: gi|1058236262|gb|JAT21647.1| (hypothetical protein g.14864 [Graphocephala atropunctata]) HSP 1 Score: 76.2554 bits (186), Expect = 2.080e-13 Identity = 86/269 (31.97%), Postives = 112/269 (41.64%), Query Frame = 0 Query: 3 LQFLAKKLEGQSLREEEIRCQ-KDREEDSGTESEDDEIG----DDAVEEEEVSYTGRRFELHRTIFRQFEDSSCTPPPTGISSSNSLCSQNERSTCDID-DNYSSEEELKEI------------------ISEKQ------PPGFSGTSTSSTSVAA-----------------EKLIGDQSK---------RH-----HRRHSGDSR--HYSPS------KRHRSTPRPHNIQRPCLDFEKMQQIKKRVVTSWRPK---GTELSLFCW 199 L+FL KL SL EE + +D + DSGTES+D+ G ++++E E S G S P SS S D++ D++SSEEEL+ I + EK+ P S +T+ +VAA + L+ S RH HR S + HY PS KRHR H IQRPCLDFEKMQQ+K R VT+WR G ELS+FCW Sbjct: 2 LKFLTHKLRTHSLNEEHPHQKIEDDDHDSGTESDDEHGGSEEPENSMESEAGSVVGAV-------------GSLADPCVATPSSPYFLDSALPSDSDLNYDHHSSEEELEVINSTPHHSQEVVRSRSASTVPEKRKWSQVTPEVVSVATTARRTVAASVTLPRCELSSSSDEEVQGLLATMSAPVQFCTSPPRHVHRPGHRSLSPPPKLFHYVPSPAASPRKRHR-----HTIQRPCLDFEKMQQMKARAVTAWRHNGEHGGELSVFCW 252
BLAST of EMLSAG00000000586 vs. nr
Match: gi|1058249571|gb|JAT28271.1| (hypothetical protein g.14866 [Graphocephala atropunctata]) HSP 1 Score: 69.3218 bits (168), Expect = 6.268e-11 Identity = 35/59 (59.32%), Postives = 38/59 (64.41%), Query Frame = 0 Query: 144 HSGDSRHYSPSKRHRSTPRPHNIQRPCLDFEKMQQIKKRVVTSWRPK---GTELSLFCW 199 H S SP KRHR H IQRPCLDFEKMQQ+K R VT+WR G ELS+FCW Sbjct: 200 HYVPSPAASPRKRHR-----HTIQRPCLDFEKMQQMKARAVTAWRHNGEHGGELSVFCW 253
BLAST of EMLSAG00000000586 vs. nr
Match: gi|1058212726|gb|JAT09879.1| (hypothetical protein g.14865, partial [Graphocephala atropunctata]) HSP 1 Score: 68.9366 bits (167), Expect = 6.848e-11 Identity = 35/59 (59.32%), Postives = 38/59 (64.41%), Query Frame = 0 Query: 144 HSGDSRHYSPSKRHRSTPRPHNIQRPCLDFEKMQQIKKRVVTSWRPK---GTELSLFCW 199 H S SP KRHR H IQRPCLDFEKMQQ+K R VT+WR G ELS+FCW Sbjct: 171 HYVPSPAASPRKRHR-----HTIQRPCLDFEKMQQMKARAVTAWRHNGEHGGELSVFCW 224
BLAST of EMLSAG00000000586 vs. nr
Match: gi|1058194196|gb|JAT00747.1| (hypothetical protein g.14437, partial [Homalodisca liturata]) HSP 1 Score: 67.3958 bits (163), Expect = 6.853e-11 Identity = 35/59 (59.32%), Postives = 39/59 (66.10%), Query Frame = 0 Query: 144 HSGDSRHYSPSKRHRSTPRPHNIQRPCLDFEKMQQIKKRVVTSWRPK---GTELSLFCW 199 H S SP KRHR+T IQRPCLDFEKMQQ+K R VT+WR G ELS+FCW Sbjct: 107 HYVPSPAASPRKRHRNT-----IQRPCLDFEKMQQMKARAVTAWRHNGEHGGELSVFCW 160
BLAST of EMLSAG00000000586 vs. nr
Match: gi|817064430|ref|XP_012253960.1| (PREDICTED: uncharacterized protein LOC105684858 [Athalia rosae] >gi|817064432|ref|XP_012253961.1| PREDICTED: uncharacterized protein LOC105684858 [Athalia rosae]) HSP 1 Score: 70.0922 bits (170), Expect = 8.334e-11 Identity = 32/51 (62.75%), Postives = 37/51 (72.55%), Query Frame = 0 Query: 152 SPSKRHRSTPRPHNIQRPCLDFEKMQQIKKRVVTSWR---PKGTELSLFCW 199 SP KRHR PH + RPCLDFEKMQQ+K R VT+WR G+ELS+FCW Sbjct: 317 SPRKRHRP---PHRLPRPCLDFEKMQQLKARAVTAWRHSGEHGSELSVFCW 364
BLAST of EMLSAG00000000586 vs. nr
Match: gi|817182965|ref|XP_012273845.1| (PREDICTED: basic-leucine zipper transcription factor A-like [Orussus abietinus]) HSP 1 Score: 70.0922 bits (170), Expect = 9.915e-11 Identity = 32/51 (62.75%), Postives = 37/51 (72.55%), Query Frame = 0 Query: 152 SPSKRHRSTPRPHNIQRPCLDFEKMQQIKKRVVTSWR---PKGTELSLFCW 199 SP KRHR PH + RPCLDFEKMQQ+K R VT+WR G+ELS+FCW Sbjct: 344 SPRKRHRP---PHRLPRPCLDFEKMQQLKARAVTAWRHSGEHGSELSVFCW 391
BLAST of EMLSAG00000000586 vs. nr
Match: gi|1000755659|ref|XP_015600765.1| (PREDICTED: putative uncharacterized protein DDB_G0291608 [Cephus cinctus]) HSP 1 Score: 69.3218 bits (168), Expect = 1.405e-10 Identity = 32/51 (62.75%), Postives = 37/51 (72.55%), Query Frame = 0 Query: 152 SPSKRHRSTPRPHNIQRPCLDFEKMQQIKKRVVTSWR---PKGTELSLFCW 199 SP KRHR PH + RPCLDFEKMQQ+K R VT+WR G+ELS+FCW Sbjct: 325 SPRKRHRP---PHRLPRPCLDFEKMQQLKARAVTAWRHSGEHGSELSVFCW 372
BLAST of EMLSAG00000000586 vs. nr
Match: gi|1130219578|ref|XP_019756989.1| (PREDICTED: uncharacterized protein LOC109535517 isoform X2 [Dendroctonus ponderosae]) HSP 1 Score: 67.0106 bits (162), Expect = 4.654e-10 Identity = 75/258 (29.07%), Postives = 109/258 (42.25%), Query Frame = 0 Query: 3 LQFLAKKLEGQSLREEEIRCQKDREEDSGTESEDD-EIGDDAVE----------------------------EEEVSYTGRRFELHRTIFRQFEDSSCTPPP----TGISSSNSLCSQNER-----------STCD------------IDDNYSSEEELKEIISEKQPPGFSGTSTSSTSVAAEK--LIGDQSKRHHRRHSGDSRHYSPSKRHRSTPRPHNIQRPCLDFEKMQQIKKRVVTSWRPKG---TELSLFCW 199 L+FL KL+ QS+ EE + D + DSGTES++D + GD V EEE+ + R R +S P + I S+ +NE S+C I+ + SS++E+ +++ + P TS +V + L+ ++S H SP KR R R ++QRP LDFEKMQQ+K R VT+WRP G ELS+FCW Sbjct: 2 LKFLTHKLKTQSINEEIHNQKGDEDHDSGTESDEDLDPGDLVVSDRMCSVSPADTGCSMESPAPDPHDPHSSEEELEVINSNPQCERVAPRPLRAASVCLPEKRKWSQIGDSHRYRPENEENMSQFSNLSPPSSCSPYLKSYGEDGHVIEHSGSSDDEVHHLLASRATPVRFRTSPPLEAVKPGRRTLVKNESPPPKLVH----YEVSPRKRSRHV-RHSHLQRPYLDFEKMQQLKARSVTAWRPSGEHTGELSVFCW 254
BLAST of EMLSAG00000000586 vs. nr
Match: gi|936593172|ref|XP_014209870.1| (PREDICTED: lateral signaling target protein 2 homolog isoform X1 [Copidosoma floridanum]) HSP 1 Score: 67.3958 bits (163), Expect = 7.526e-10 Identity = 31/51 (60.78%), Postives = 36/51 (70.59%), Query Frame = 0 Query: 152 SPSKRHRSTPRPHNIQRPCLDFEKMQQIKKRVVTSWR---PKGTELSLFCW 199 SP KRHR PH + RPCLDFEKMQQ+K + VT+WR G ELS+FCW Sbjct: 335 SPRKRHRP---PHRLPRPCLDFEKMQQMKTQAVTAWRHTSEHGKELSVFCW 382
BLAST of EMLSAG00000000586 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold334_size202906-processed-gene-0.4 (protein:Tk08956 transcript:snap_masked-scaffold334_size202906-processed-gene-0.4-mRNA-1 annotation:"PREDICTED: uncharacterized protein LOC100168936") HSP 1 Score: 97.8265 bits (242), Expect = 2.553e-24 Identity = 44/49 (89.80%), Postives = 46/49 (93.88%), Query Frame = 0 Query: 152 SPSKRHRS-TPRPHNIQRPCLDFEKMQQIKKRVVTSWRPKGTELSLFCW 199 SP KRHRS TPRP N+QRPCLDFEKMQQIKKRVVTSWRP+GTELSLFCW Sbjct: 370 SPHKRHRSRTPRPQNLQRPCLDFEKMQQIKKRVVTSWRPQGTELSLFCW 418 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000586 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000000586 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 6
BLAST of EMLSAG00000000586 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000000586 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000000586 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 2
BLAST of EMLSAG00000000586 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
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BLAST of EMLSAG00000000586 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s109:177125..186965- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000586-683352 ID=EMLSAG00000000586-683352|Name=EMLSAG00000000586|organism=Lepeophtheirus salmonis|type=gene|length=9841bp|location=Sequence derived from alignment at LSalAtl2s109:177125..186965- (Lepeophtheirus salmonis)back to top Add to Basket
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