EMLSAG00000000653, EMLSAG00000000653-683419 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000653 vs. C. finmarchicus
Match: gi|592798019|gb|GAXK01156549.1| (TSA: Calanus finmarchicus comp1241877_c0_seq1 transcribed RNA sequence) HSP 1 Score: 34.6538 bits (78), Expect = 9.125e-2 Identity = 27/76 (35.53%), Postives = 38/76 (50.00%), Query Frame = 0 Query: 95 VSW---SPIDGLSVG------DSRFGILVS-------AVYTLRFLEPLQVRDSGEYSCYVNSQLLETFLVKVQVSG 154 VSW S + L+VG D R G++ S ++L+ E +RDSGEY C VNS+ E+ V + V G Sbjct: 586 VSWMRSSDMSVLTVGGLVFSSDPRIGVVSSTRPGQAAGTWSLQIAEA-ALRDSGEYQCQVNSEPKESLDVTLVVRG 810
BLAST of EMLSAG00000000653 vs. C. finmarchicus
Match: gi|592798018|gb|GAXK01156550.1| (TSA: Calanus finmarchicus comp1241877_c0_seq2 transcribed RNA sequence) HSP 1 Score: 33.8834 bits (76), Expect = 1.918e-1 Identity = 24/63 (38.10%), Postives = 35/63 (55.56%), Query Frame = 0 Query: 92 GLLVSWSPIDGLSVGDSRFGILVSAVYTLRFLEPLQVRDSGEYSCYVNSQLLETFLVKVQVSG 154 GL+ S P G+ V +R G + ++L+ E +RDSGEY C VNS+ E+ V + V G Sbjct: 561 GLVFSSDPRIGV-VSSTRPG-QAAGTWSLQIAE-AALRDSGEYQCQVNSEPKESLDVTLVVRG 740
BLAST of EMLSAG00000000653 vs. C. finmarchicus
Match: gi|592853392|gb|GAXK01104152.1| (TSA: Calanus finmarchicus comp270956_c8_seq9 transcribed RNA sequence) HSP 1 Score: 30.0314 bits (66), Expect = 1.660e+0 Identity = 30/102 (29.41%), Postives = 50/102 (49.02%), Query Frame = 0 Query: 51 LSASEVLLNQNTRLKLIEWKFCKLEDSPHGDRGDYESRVTPGLLVSWSPIDGLSVGDSRFGILVSAVYTLRFLEPLQVRDSGEYSCYVNSQLLETFLVKVQV 152 +S S+V +NT + L+EW+ CK + S +G + + T G V+ + RF + ++AV T D+GEY C VN+++ VK+ V Sbjct: 1 ISCSDV--TENTYVLLLEWR-CKGQCSENGK--ETLVKFTRGRGVTKQRDPRFVLDQERFDLNLTAVRT---------EDAGEYFCLVNNKMEGQDRVKLAV 264
BLAST of EMLSAG00000000653 vs. C. finmarchicus
Match: gi|592751205|gb|GAXK01203208.1| (TSA: Calanus finmarchicus comp521866_c1_seq2 transcribed RNA sequence) HSP 1 Score: 31.187 bits (69), Expect = 1.689e+0 Identity = 29/112 (25.89%), Postives = 50/112 (44.64%), Query Frame = 0 Query: 43 DSGIYDFNL--------SASEVLLNQNTRLKLIEWKFCKLEDSPHGDRGDYE--SRVTPGLLVSWSPIDGLSVGDSRFGILVSAVYTLRFLEPLQVRDSGEYSCYVNSQLLE 144 DSG Y + +++E+ + + T + +K KLE + D+E S + L V+W L G+S+ I FL L+ D+G+Y C + ++L E Sbjct: 543 DSGKYSCKIITEVGEVSTSAELFVKKKTSISTQPFKGDKLEGESLSLKCDFETDSDLAGNLRVTWFKDGKLLEGESKREI---------FLNDLKYDDTGDYKCLIKTELDE 851
BLAST of EMLSAG00000000653 vs. C. finmarchicus
Match: gi|592751204|gb|GAXK01203209.1| (TSA: Calanus finmarchicus comp521866_c1_seq3 transcribed RNA sequence) HSP 1 Score: 30.8018 bits (68), Expect = 1.939e+0 Identity = 29/112 (25.89%), Postives = 50/112 (44.64%), Query Frame = 0 Query: 43 DSGIYDFNL--------SASEVLLNQNTRLKLIEWKFCKLEDSPHGDRGDYE--SRVTPGLLVSWSPIDGLSVGDSRFGILVSAVYTLRFLEPLQVRDSGEYSCYVNSQLLE 144 DSG Y + +++E+ + + T + +K KLE + D+E S + L V+W L G+S+ I FL L+ D+G+Y C + ++L E Sbjct: 532 DSGKYSCKIITEVGEVSTSAELFVKKKTSISTQPFKGDKLEGESLSLKCDFETDSDLAGNLRVTWFKDGKLLEGESKREI---------FLNDLKYDDTGDYKCLIKTELDE 840
BLAST of EMLSAG00000000653 vs. C. finmarchicus
Match: gi|592857733|gb|GAXK01099829.1| (TSA: Calanus finmarchicus comp253937_c1_seq1 transcribed RNA sequence) HSP 1 Score: 30.8018 bits (68), Expect = 1.950e+0 Identity = 12/27 (44.44%), Postives = 19/27 (70.37%), Query Frame = 0 Query: 126 LQVRDSGEYSCYVNSQLLETFLVKVQV 152 LQ RDSG Y C V++Q + +F V++ + Sbjct: 911 LQKRDSGMYECQVSTQPVRSFFVRLNI 991
BLAST of EMLSAG00000000653 vs. C. finmarchicus
Match: gi|592751206|gb|GAXK01203207.1| (TSA: Calanus finmarchicus comp521866_c1_seq1 transcribed RNA sequence) HSP 1 Score: 30.8018 bits (68), Expect = 1.959e+0 Identity = 29/112 (25.89%), Postives = 50/112 (44.64%), Query Frame = 0 Query: 43 DSGIYDFNL--------SASEVLLNQNTRLKLIEWKFCKLEDSPHGDRGDYE--SRVTPGLLVSWSPIDGLSVGDSRFGILVSAVYTLRFLEPLQVRDSGEYSCYVNSQLLE 144 DSG Y + +++E+ + + T + +K KLE + D+E S + L V+W L G+S+ I FL L+ D+G+Y C + ++L E Sbjct: 604 DSGKYSCKIITEVGEVSTSAELFVKKKTSISTQPFKGDKLEGESLSLKCDFETDSDLAGNLRVTWFKDGKLLEGESKREI---------FLNDLKYDDTGDYKCLIKTELDE 912
BLAST of EMLSAG00000000653 vs. C. finmarchicus
Match: gi|592853378|gb|GAXK01104166.1| (TSA: Calanus finmarchicus comp270956_c11_seq8 transcribed RNA sequence) HSP 1 Score: 30.0314 bits (66), Expect = 2.059e+0 Identity = 30/102 (29.41%), Postives = 50/102 (49.02%), Query Frame = 0 Query: 51 LSASEVLLNQNTRLKLIEWKFCKLEDSPHGDRGDYESRVTPGLLVSWSPIDGLSVGDSRFGILVSAVYTLRFLEPLQVRDSGEYSCYVNSQLLETFLVKVQV 152 +S S+V +NT + L+EW+ CK + S +G + + T G V+ + RF + ++AV T D+GEY C VN+++ VK+ V Sbjct: 92 ISCSDV--TENTYVLLLEWR-CKGQCSENGK--ETLVKFTRGRGVTKQRDPRFVLDQERFDLNLTAVRT---------EDAGEYFCLVNNKMEGQDRVKLAV 355
BLAST of EMLSAG00000000653 vs. C. finmarchicus
Match: gi|592763690|gb|GAXK01190878.1| (TSA: Calanus finmarchicus comp334507_c0_seq12 transcribed RNA sequence) HSP 1 Score: 30.4166 bits (67), Expect = 2.336e+0 Identity = 13/36 (36.11%), Postives = 21/36 (58.33%), Query Frame = 0 Query: 105 VGDSRFGILVSAVYTLRFLEPLQVRDSGEYSCYVNS 140 V D RF +L S ++ + + +D+GEY C V+S Sbjct: 952 VRDKRFSVLTSTTSSMLLITLMTPKDTGEYVCEVSS 1059
BLAST of EMLSAG00000000653 vs. C. finmarchicus
Match: gi|592763691|gb|GAXK01190877.1| (TSA: Calanus finmarchicus comp334507_c0_seq11 transcribed RNA sequence) HSP 1 Score: 30.4166 bits (67), Expect = 2.346e+0 Identity = 13/36 (36.11%), Postives = 21/36 (58.33%), Query Frame = 0 Query: 105 VGDSRFGILVSAVYTLRFLEPLQVRDSGEYSCYVNS 140 V D RF +L S ++ + + +D+GEY C V+S Sbjct: 985 VRDKRFSVLTSTTSSMLLITLMTPKDTGEYVCEVSS 1092
BLAST of EMLSAG00000000653 vs. L. salmonis peptides
Match: EMLSAP00000000653 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1101:26658:99231:1 gene:EMLSAG00000000653 transcript:EMLSAT00000000653 description:"maker-LSalAtl2s1101-augustus-gene-0.3") HSP 1 Score: 314.694 bits (805), Expect = 9.033e-111 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0 Query: 1 MNLCYFYVLFFIILGNWSMLVSTFKYDNGHSPGKSSIQTIIVDSGIYDFNLSASEVLLNQNTRLKLIEWKFCKLEDSPHGDRGDYESRVTPGLLVSWSPIDGLSVGDSRFGILVSAVYTLRFLEPLQVRDSGEYSCYVNSQLLETFLVKVQVSG 154 MNLCYFYVLFFIILGNWSMLVSTFKYDNGHSPGKSSIQTIIVDSGIYDFNLSASEVLLNQNTRLKLIEWKFCKLEDSPHGDRGDYESRVTPGLLVSWSPIDGLSVGDSRFGILVSAVYTLRFLEPLQVRDSGEYSCYVNSQLLETFLVKVQVSG Sbjct: 1 MNLCYFYVLFFIILGNWSMLVSTFKYDNGHSPGKSSIQTIIVDSGIYDFNLSASEVLLNQNTRLKLIEWKFCKLEDSPHGDRGDYESRVTPGLLVSWSPIDGLSVGDSRFGILVSAVYTLRFLEPLQVRDSGEYSCYVNSQLLETFLVKVQVSG 154 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000653 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000000653 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 22
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BLAST of EMLSAG00000000653 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000000653 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000000653 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000000653 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000000653 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1101:26658..99231+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000653-683419 ID=EMLSAG00000000653-683419|Name=EMLSAG00000000653|organism=Lepeophtheirus salmonis|type=gene|length=72574bp|location=Sequence derived from alignment at LSalAtl2s1101:26658..99231+ (Lepeophtheirus salmonis)back to top Add to Basket
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