EMLSAG00000000733, EMLSAG00000000733-683499 (gene) Lepeophtheirus salmonis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000733 vs. GO
Match: - (symbol:Rorb "Nuclear receptor ROR-beta" species:10116 "Rattus norvegicus" [GO:0003707 "steroid hormone receptor activity" evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity" evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IDA] [GO:0007601 "visual perception" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0042462 "eye photoreceptor cell development" evidence=ISS] InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:1306778 GO:GO:0005634 GO:GO:0045893 GO:GO:0007420 GO:GO:0007623 GO:GO:0007601 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006357 GO:GO:0006366 GO:GO:0009725 GO:GO:0030522 GO:GO:0042462 eggNOG:NOG324222 GO:GO:0008502 PDB:1K4W PDB:1N4H PDB:1NQ7 PDBsum:1K4W PDBsum:1N4H PDBsum:1NQ7 HOGENOM:HOG000010200 HOVERGEN:HBG106848 EMBL:L14610 PIR:I65219 UniGene:Rn.231652 ProteinModelPortal:P45446 SMR:P45446 STRING:10116.ENSRNOP00000018137 PhosphoSite:P45446 PaxDb:P45446 UCSC:RGD:1306778 InParanoid:P45446 EvolutionaryTrace:P45446 PRO:PR:P45446 Genevestigator:P45446 Uniprot:P45446) HSP 1 Score: 152.14 bits (383), Expect = 2.188e-38 Identity = 62/77 (80.52%), Postives = 70/77 (90.91%), Query Frame = 0
Query: 40 AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDG 116
AQIE+IPCK+CGDKSSG+HYGVITCEGCKGFFRRSQ + +Y CPRQ+NC++DR NRNRCQ CRLQKCLALGMSRD
Sbjct: 14 AQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQKCLALGMSRDA 90 HSP 2 Score: 103.219 bits (256), Expect = 6.120e-22 Identity = 77/248 (31.05%), Postives = 116/248 (46.77%), Query Frame = 0
Query: 463 DRIGVLLTNSIFEAHTRTSLLTRSQIHEQCKQGVDQVKLYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVIRMSRYFDLSQNAVLFFDIMLPMESFMTTGDTGEMNLVNQIFDLAK------------AVF-------------------QTLQRELTNRPPMVPTKG--DVSVLTKLLNKRHTLREINFLHTEALTRFRSGNGSMIE--FPALYRELFSSD 675
DRI +I ++H T T ++H+ Q ++ +++ S+E LW A ++T+ IQ ++EFAK + GFM+ Q+DQI LLK G E+ ++RM R F+ N VLF M+ F G +LVN+ FD AK A+F Q LQ ++ V K D L KL+ K T+ + LH E L F+ + ++ FP LY+ELF+ D
Sbjct: 224 DRIA----QNIIKSHLETCQYTMEELHQLAWQTHTYEEIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSD---DLVNEAFDFAKNLCSLQLTEEEIALFSSAVLISPDRAWLLEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKLIAKIPTITAVCNLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPD 464
BLAST of EMLSAG00000000733 vs. GO
Match: - (symbol:Rorb "RAR-related orphan receptor B" species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISO;IDA] [GO:0003707 "steroid hormone receptor activity" evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity" evidence=IEA] [GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IDA] [GO:0007420 "brain development" evidence=IEP] [GO:0007601 "visual perception" evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEP] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008502 "melatonin receptor activity" evidence=IDA] [GO:0009725 "response to hormone" evidence=IEP] [GO:0035881 "amacrine cell differentiation" evidence=ISS] [GO:0042462 "eye photoreceptor cell development" evidence=IEA;ISO;ISS] [GO:0042752 "regulation of circadian rhythm" evidence=ISS] [GO:0043565 "sequence-specific DNA binding" evidence=IEA;ISO] [GO:0045668 "negative regulation of osteoblast differentiation" evidence=ISS] [GO:0045892 "negative regulation of transcription, DNA-templated" evidence=IDA] [GO:0045893 "positive regulation of transcription, DNA-templated" evidence=IEA;ISO;IDA] [GO:0046548 "retinal rod cell development" evidence=ISS] [GO:0046549 "retinal cone cell development" evidence=ISS] [GO:0060041 "retina development in camera-type eye" evidence=ISS] [GO:0071300 "cellular response to retinoic acid" evidence=IDA] InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:1306778 GO:GO:0005634 GO:GO:0045893 GO:GO:0007420 GO:GO:0007623 GO:GO:0007601 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006357 GO:GO:0006366 GO:GO:0009725 GO:GO:0030522 GO:GO:0042462 eggNOG:NOG324222 GO:GO:0008502 PDB:1K4W PDB:1N4H PDB:1NQ7 PDBsum:1K4W PDBsum:1N4H PDBsum:1NQ7 HOGENOM:HOG000010200 HOVERGEN:HBG106848 EMBL:L14610 PIR:I65219 UniGene:Rn.231652 ProteinModelPortal:P45446 SMR:P45446 STRING:10116.ENSRNOP00000018137 PhosphoSite:P45446 PaxDb:P45446 UCSC:RGD:1306778 InParanoid:P45446 EvolutionaryTrace:P45446 PRO:PR:P45446 Genevestigator:P45446 Uniprot:P45446) HSP 1 Score: 152.14 bits (383), Expect = 2.188e-38 Identity = 62/77 (80.52%), Postives = 70/77 (90.91%), Query Frame = 0
Query: 40 AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDG 116
AQIE+IPCK+CGDKSSG+HYGVITCEGCKGFFRRSQ + +Y CPRQ+NC++DR NRNRCQ CRLQKCLALGMSRD
Sbjct: 14 AQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQKCLALGMSRDA 90 HSP 2 Score: 103.219 bits (256), Expect = 6.120e-22 Identity = 77/248 (31.05%), Postives = 116/248 (46.77%), Query Frame = 0
Query: 463 DRIGVLLTNSIFEAHTRTSLLTRSQIHEQCKQGVDQVKLYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVIRMSRYFDLSQNAVLFFDIMLPMESFMTTGDTGEMNLVNQIFDLAK------------AVF-------------------QTLQRELTNRPPMVPTKG--DVSVLTKLLNKRHTLREINFLHTEALTRFRSGNGSMIE--FPALYRELFSSD 675
DRI +I ++H T T ++H+ Q ++ +++ S+E LW A ++T+ IQ ++EFAK + GFM+ Q+DQI LLK G E+ ++RM R F+ N VLF M+ F G +LVN+ FD AK A+F Q LQ ++ V K D L KL+ K T+ + LH E L F+ + ++ FP LY+ELF+ D
Sbjct: 224 DRIA----QNIIKSHLETCQYTMEELHQLAWQTHTYEEIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSD---DLVNEAFDFAKNLCSLQLTEEEIALFSSAVLISPDRAWLLEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKLIAKIPTITAVCNLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPD 464
BLAST of EMLSAG00000000733 vs. GO
Match: - (symbol:RORB "Uncharacterized protein" species:9913 "Bos taurus" [GO:0003707 "steroid hormone receptor activity" evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0042462 "eye photoreceptor cell development" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive regulation of transcription, DNA-templated" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0045893 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0006357 GO:GO:0006366 GO:GO:0030522 GO:GO:0042462 GeneTree:ENSGT00740000114909 OrthoDB:EOG79PJNW TreeFam:TF319910 OMA:WEQLHDY CTD:6096 KO:K08533 EMBL:DAAA02022913 EMBL:DAAA02022911 EMBL:DAAA02022912 RefSeq:NP_001179587.1 UniGene:Bt.51697 Ensembl:ENSBTAT00000028921 GeneID:528382 KEGG:bta:528382 NextBio:20874809 Uniprot:F1MWS0) HSP 1 Score: 152.14 bits (383), Expect = 2.318e-38 Identity = 62/77 (80.52%), Postives = 70/77 (90.91%), Query Frame = 0
Query: 40 AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDG 116
AQIE+IPCK+CGDKSSG+HYGVITCEGCKGFFRRSQ + +Y CPRQ+NC++DR NRNRCQ CRLQKCLALGMSRD
Sbjct: 3 AQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQKCLALGMSRDA 79 HSP 2 Score: 103.219 bits (256), Expect = 6.133e-22 Identity = 77/248 (31.05%), Postives = 116/248 (46.77%), Query Frame = 0
Query: 463 DRIGVLLTNSIFEAHTRTSLLTRSQIHEQCKQGVDQVKLYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVIRMSRYFDLSQNAVLFFDIMLPMESFMTTGDTGEMNLVNQIFDLAK------------AVF-------------------QTLQRELTNRPPMVPTKG--DVSVLTKLLNKRHTLREINFLHTEALTRFRSGNGSMIE--FPALYRELFSSD 675
DRI +I ++H T T ++H+ Q ++ +++ S+E LW A ++T+ IQ ++EFAK + GFM+ Q+DQI LLK G E+ ++RM R F+ N VLF M+ F G +LVN+ FD AK A+F Q LQ ++ V K D L KL+ K T+ + LH E L F+ + ++ FP LY+ELF+ D
Sbjct: 213 DRIA----QNIIKSHLETCQYTMEELHQLAWQTHTYEEIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSD---DLVNEAFDFAKNLCSLQLTEEEIALFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKLIAKIPTITAVCNLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPD 453
BLAST of EMLSAG00000000733 vs. GO
Match: - (symbol:Rora "Protein Rora" species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0003707 "steroid hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006809 "nitric oxide biosynthetic process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0021702 "cerebellar Purkinje cell differentiation" evidence=IEA] [GO:0043030 "regulation of macrophage activation" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA] [GO:0046068 "cGMP metabolic process" evidence=IEA] InterPro:IPR001628 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00105 PRINTS:PR00047 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 RGD:1308419 GO:GO:0005634 GO:GO:0007623 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0006809 GO:GO:0021702 GO:GO:0046068 GO:GO:0043401 GO:GO:0043030 GeneTree:ENSGT00740000114909 OrthoDB:EOG79PJNW EMBL:AABR06055748 EMBL:AABR06055744 EMBL:AABR06055745 EMBL:AABR06055746 EMBL:AABR06055747 Ensembl:ENSRNOT00000013142 OMA:ELXLICK NextBio:35579660 Uniprot:F1LZZ3) HSP 1 Score: 146.747 bits (369), Expect = 2.536e-38 Identity = 62/76 (81.58%), Postives = 68/76 (89.47%), Query Frame = 0
Query: 41 QIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDG 116
QIEIIPCK+CGDKSSG+HYGVITCEGCKGFFRRSQ S Y CPRQKNC++DR +RNRCQ CRLQKCLA+GMSRD
Sbjct: 1 QIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDA 76
BLAST of EMLSAG00000000733 vs. GO
Match: - (symbol:Rora "RAR-related orphan receptor A" species:10116 "Rattus norvegicus" [GO:0001223 "transcription coactivator binding" evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISO] [GO:0003707 "steroid hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=ISO] [GO:0006809 "nitric oxide biosynthetic process" evidence=IEA;ISO] [GO:0007623 "circadian rhythm" evidence=IEP] [GO:0008142 "oxysterol binding" evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010906 "regulation of glucose metabolic process" evidence=ISO] [GO:0021702 "cerebellar Purkinje cell differentiation" evidence=IEA;ISO] [GO:0030522 "intracellular receptor signaling pathway" evidence=ISO] [GO:0032922 "circadian regulation of gene expression" evidence=ISO] [GO:0036315 "cellular response to sterol" evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm" evidence=ISO] [GO:0043030 "regulation of macrophage activation" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0045599 "negative regulation of fat cell differentiation" evidence=ISO] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0046068 "cGMP metabolic process" evidence=IEA;ISO] [GO:0072539 "T-helper 17 cell differentiation" evidence=ISO] [GO:0098531 "direct ligand regulated sequence-specific DNA binding transcription factor activity" evidence=ISO] InterPro:IPR001628 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00105 PRINTS:PR00047 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 RGD:1308419 GO:GO:0005634 GO:GO:0007623 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0006809 GO:GO:0021702 GO:GO:0046068 GO:GO:0043401 GO:GO:0043030 GeneTree:ENSGT00740000114909 OrthoDB:EOG79PJNW EMBL:AABR06055748 EMBL:AABR06055744 EMBL:AABR06055745 EMBL:AABR06055746 EMBL:AABR06055747 Ensembl:ENSRNOT00000013142 OMA:ELXLICK NextBio:35579660 Uniprot:F1LZZ3) HSP 1 Score: 146.747 bits (369), Expect = 2.536e-38 Identity = 62/76 (81.58%), Postives = 68/76 (89.47%), Query Frame = 0
Query: 41 QIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDG 116
QIEIIPCK+CGDKSSG+HYGVITCEGCKGFFRRSQ S Y CPRQKNC++DR +RNRCQ CRLQKCLA+GMSRD
Sbjct: 1 QIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDA 76
BLAST of EMLSAG00000000733 vs. GO
Match: - (symbol:Rorb "Nuclear receptor ROR-beta" species:10116 "Rattus norvegicus" [GO:0003707 "steroid hormone receptor activity" evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0042462 "eye photoreceptor cell development" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive regulation of transcription, DNA-templated" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:1306778 GO:GO:0005634 GO:GO:0045893 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0006357 GO:GO:0006366 GO:GO:0030522 GO:GO:0042462 GeneTree:ENSGT00740000114909 OrthoDB:EOG79PJNW TreeFam:TF319910 OMA:WEQLHDY CTD:6096 KO:K08533 UniGene:Rn.231652 EMBL:AABR06010065 EMBL:AABR06010066 EMBL:AABR06010067 RefSeq:XP_002728915.1 Ensembl:ENSRNOT00000018137 GeneID:309288 KEGG:rno:309288 NextBio:660539 Uniprot:F1LQ88) HSP 1 Score: 152.14 bits (383), Expect = 2.598e-38 Identity = 62/77 (80.52%), Postives = 70/77 (90.91%), Query Frame = 0
Query: 40 AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDG 116
AQIE+IPCK+CGDKSSG+HYGVITCEGCKGFFRRSQ + +Y CPRQ+NC++DR NRNRCQ CRLQKCLALGMSRD
Sbjct: 14 AQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQKCLALGMSRDA 90 HSP 2 Score: 103.219 bits (256), Expect = 6.010e-22 Identity = 77/248 (31.05%), Postives = 116/248 (46.77%), Query Frame = 0
Query: 463 DRIGVLLTNSIFEAHTRTSLLTRSQIHEQCKQGVDQVKLYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVIRMSRYFDLSQNAVLFFDIMLPMESFMTTGDTGEMNLVNQIFDLAK------------AVF-------------------QTLQRELTNRPPMVPTKG--DVSVLTKLLNKRHTLREINFLHTEALTRFRSGNGSMIE--FPALYRELFSSD 675
DRI +I ++H T T ++H+ Q ++ +++ S+E LW A ++T+ IQ ++EFAK + GFM+ Q+DQI LLK G E+ ++RM R F+ N VLF M+ F G +LVN+ FD AK A+F Q LQ ++ V K D L KL+ K T+ + LH E L F+ + ++ FP LY+ELF+ D
Sbjct: 224 DRIA----QNIIKSHLETCQYTMEELHQLAWQTHTYEEIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSD---DLVNEAFDFAKNLCSLQLTEEEIALFSSAVLISPDRAWLLEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKLIAKIPTITAVCNLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPD 464
BLAST of EMLSAG00000000733 vs. GO
Match: - (symbol:Rorb "RAR-related orphan receptor beta" species:10090 "Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISO;IDA] [GO:0003707 "steroid hormone receptor activity" evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=ISO] [GO:0007186 "G-protein coupled receptor signaling pathway" evidence=ISO] [GO:0007275 "multicellular organismal development" evidence=IEA] [GO:0007601 "visual perception" evidence=IEA] [GO:0008134 "transcription factor binding" evidence=IPI] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008502 "melatonin receptor activity" evidence=ISO] [GO:0035881 "amacrine cell differentiation" evidence=IMP] [GO:0042462 "eye photoreceptor cell development" evidence=IMP] [GO:0042752 "regulation of circadian rhythm" evidence=IMP] [GO:0043401 "steroid hormone mediated signaling pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IDA] [GO:0045892 "negative regulation of transcription, DNA-templated" evidence=ISO] [GO:0045893 "positive regulation of transcription, DNA-templated" evidence=ISO;IDA] [GO:0046548 "retinal rod cell development" evidence=IMP] [GO:0046549 "retinal cone cell development" evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA] [GO:0050896 "response to stimulus" evidence=IEA] [GO:0060041 "retina development in camera-type eye" evidence=IMP] [GO:0071300 "cellular response to retinoic acid" evidence=ISO] InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 MGI:MGI:1343464 GO:GO:0005634 GO:GO:0045893 GO:GO:0007601 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006357 GO:GO:0006366 GO:GO:0030522 GO:GO:0042462 eggNOG:NOG324222 GeneTree:ENSGT00740000114909 HOGENOM:HOG000010200 HOVERGEN:HBG106848 OrthoDB:EOG79PJNW TreeFam:TF319910 OMA:WEQLHDY EMBL:BC024842 EMBL:BC058269 EMBL:DQ779923 EMBL:DQ779924 EMBL:AB258405 RefSeq:NP_001036819.1 RefSeq:NP_666207.3 UniGene:Mm.234641 ProteinModelPortal:Q8R1B8 SMR:Q8R1B8 BioGrid:230457 PhosphoSite:Q8R1B8 PRIDE:Q8R1B8 Ensembl:ENSMUST00000040153 Ensembl:ENSMUST00000112828 Ensembl:ENSMUST00000112832 GeneID:225998 KEGG:mmu:225998 UCSC:uc008gyc.2 UCSC:uc008gye.2 CTD:6096 KO:K08533 NextBio:377911 PRO:PR:Q8R1B8 Bgee:Q8R1B8 CleanEx:MM_RORB Genevestigator:Q8R1B8 Uniprot:Q8R1B8) HSP 1 Score: 152.14 bits (383), Expect = 2.623e-38 Identity = 62/77 (80.52%), Postives = 70/77 (90.91%), Query Frame = 0
Query: 40 AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDG 116
AQIE+IPCK+CGDKSSG+HYGVITCEGCKGFFRRSQ + +Y CPRQ+NC++DR NRNRCQ CRLQKCLALGMSRD
Sbjct: 14 AQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQKCLALGMSRDA 90 HSP 2 Score: 103.605 bits (257), Expect = 5.101e-22 Identity = 77/248 (31.05%), Postives = 116/248 (46.77%), Query Frame = 0
Query: 463 DRIGVLLTNSIFEAHTRTSLLTRSQIHEQCKQGVDQVKLYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVIRMSRYFDLSQNAVLFFDIMLPMESFMTTGDTGEMNLVNQIFDLAK------------AVF-------------------QTLQRELTNRPPMVPTKG--DVSVLTKLLNKRHTLREINFLHTEALTRFRSGNGSMIE--FPALYRELFSSD 675
DRI +I ++H T T ++H+ Q ++ +++ S+E LW A ++T+ IQ ++EFAK + GFM+ Q+DQI LLK G E+ ++RM R F+ N VLF M+ F G +LVN+ FD AK A+F Q LQ ++ V K D L KL+ K T+ + LH E L F+ + ++ FP LY+ELF+ D
Sbjct: 224 DRIA----QNIIKSHLETCQYTMEELHQLAWQTHTYEEIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSD---DLVNEAFDFAKNLCSLQLTEEEIALFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKLIAKIPTITAVCNLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPD 464
BLAST of EMLSAG00000000733 vs. GO
Match: - (symbol:RORA "Nuclear receptor ROR-alpha" species:9606 "Homo sapiens" [GO:0001222 "transcription corepressor binding" evidence=IPI] [GO:0001223 "transcription coactivator binding" evidence=IPI] [GO:0001525 "angiogenesis" evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA] [GO:0003707 "steroid hormone receptor activity" evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IDA] [GO:0006367 "transcription initiation from RNA polymerase II promoter" evidence=TAS] [GO:0006805 "xenobiotic metabolic process" evidence=ISS] [GO:0006809 "nitric oxide biosynthetic process" evidence=IEA] [GO:0008134 "transcription factor binding" evidence=IPI] [GO:0008142 "oxysterol binding" evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008589 "regulation of smoothened signaling pathway" evidence=ISS] [GO:0010467 "gene expression" evidence=TAS] [GO:0010575 "positive regulation vascular endothelial growth factor production" evidence=IMP] [GO:0010906 "regulation of glucose metabolic process" evidence=ISS] [GO:0019218 "regulation of steroid metabolic process" evidence=ISS] [GO:0021702 "cerebellar Purkinje cell differentiation" evidence=IEA] [GO:0021930 "cerebellar granule cell precursor proliferation" evidence=ISS] [GO:0030522 "intracellular receptor signaling pathway" evidence=IDA] [GO:0032922 "circadian regulation of gene expression" evidence=ISS] [GO:0036315 "cellular response to sterol" evidence=IDA;IMP] [GO:0042692 "muscle cell differentiation" evidence=IMP] [GO:0042753 "positive regulation of circadian rhythm" evidence=ISS] [GO:0043030 "regulation of macrophage activation" evidence=IEA] [GO:0043124 "negative regulation of I-kappaB kinase/NF-kappaB signaling" evidence=IMP] [GO:0043565 "sequence-specific DNA binding" evidence=IDA] [GO:0045599 "negative regulation of fat cell differentiation" evidence=ISS] [GO:0045893 "positive regulation of transcription, DNA-templated" evidence=IDA] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IDA] [GO:0046068 "cGMP metabolic process" evidence=IEA] [GO:0050728 "negative regulation of inflammatory response" evidence=IMP] [GO:0060850 "regulation of transcription involved in cell fate commitment" evidence=ISS] [GO:0070328 "triglyceride homeostasis" evidence=IMP] [GO:0071456 "cellular response to hypoxia" evidence=IMP] [GO:0072539 "T-helper 17 cell differentiation" evidence=ISS] [GO:0098531 "direct ligand regulated sequence-specific DNA binding transcription factor activity" evidence=IDA] [GO:2000188 "regulation of cholesterol homeostasis" evidence=ISS] Reactome:REACT_71 InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005654 GO:GO:0007623 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0006809 GO:GO:0006367 EMBL:CH471082 EMBL:AC087385 GO:GO:0021702 GO:GO:0046068 Reactome:REACT_24941 GO:GO:0043030 eggNOG:NOG324222 EMBL:U04897 EMBL:U04898 EMBL:U04899 EMBL:L14611 EMBL:HQ692818 EMBL:AC009560 EMBL:AC012404 EMBL:AC022898 EMBL:AC079068 EMBL:AC107241 EMBL:AC107905 EMBL:BC008831 EMBL:BC100987 EMBL:BC100988 EMBL:BC100989 EMBL:BC100990 PIR:A53196 PIR:A56856 PIR:B53196 PIR:C53196 RefSeq:NP_002934.1 RefSeq:NP_599022.1 RefSeq:NP_599023.1 RefSeq:NP_599024.1 UniGene:Hs.560343 UniGene:Hs.655155 PDB:1N83 PDB:1S0X PDBsum:1N83 PDBsum:1S0X ProteinModelPortal:P35398 SMR:P35398 BioGrid:112022 DIP:DIP-29938N IntAct:P35398 MINT:MINT-2855668 STRING:9606.ENSP00000261523 BindingDB:P35398 ChEMBL:CHEMBL5868 GuidetoPHARMACOLOGY:598 PhosphoSite:P35398 DMDM:548814 PaxDb:P35398 PRIDE:P35398 Ensembl:ENST00000261523 Ensembl:ENST00000309157 Ensembl:ENST00000335670 Ensembl:ENST00000449337 GeneID:6095 KEGG:hsa:6095 UCSC:uc002agt.4 UCSC:uc002agv.3 UCSC:uc002agw.3 UCSC:uc002agx.3 CTD:6095 GeneCards:GC15M060780 HGNC:HGNC:10258 HPA:CAB009861 MIM:600825 neXtProt:NX_P35398 PharmGKB:PA34630 HOGENOM:HOG000010200 HOVERGEN:HBG106848 InParanoid:P35398 KO:K08532 OMA:GHCLTGQ OrthoDB:EOG79PJNW PhylomeDB:P35398 TreeFam:TF319910 SignaLink:P35398 ChiTaRS:RORA EvolutionaryTrace:P35398 GeneWiki:RAR-related_orphan_receptor_alpha GenomeRNAi:6095 NextBio:23703 PRO:PR:P35398 ArrayExpress:P35398 Bgee:P35398 CleanEx:HS_RORA Genevestigator:P35398 Uniprot:P35398) HSP 1 Score: 152.91 bits (385), Expect = 3.192e-38 Identity = 64/78 (82.05%), Postives = 70/78 (89.74%), Query Frame = 0
Query: 39 NAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDG 116
NAQIEIIPCK+CGDKSSG+HYGVITCEGCKGFFRRSQ S Y CPRQKNC++DR +RNRCQ CRLQKCLA+GMSRD
Sbjct: 98 NAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDA 175 HSP 2 Score: 103.605 bits (257), Expect = 8.816e-22 Identity = 70/242 (28.93%), Postives = 112/242 (46.28%), Query Frame = 0
Query: 469 LTNSIFEAHTRTSLLTRSQIHEQCKQGVDQVKLYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVIRMSRYFDLSQNAVLFFDIMLPMESFMTTGDTGEMNLVNQIFDLAKAV--FQTLQRELTNRPPMVPTKGDVS-------------------------------VLTKLLNKRHTLREINFLHTEALTRFRSGNGSMIE--FPALYRELFSSD 675
L +I ++H T R ++ + Q Q ++ ++N +E +W A K+T IQ ++EFAK + GFM+ Q+DQI LLK G+ E+ IRM R FD SQN ++FD + G + ++ +F+ K++ + E+ V D S +LTKL+ K TLR + HTE L F++ ++ FP LY+ELF+S+
Sbjct: 309 LAQNISKSHLETCQYLREELQQITWQTFLQEEIENYQNKQREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFD-SQNNTVYFDGKYASPDVFKS--LGCEDFISFVFEFGKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSE 547
BLAST of EMLSAG00000000733 vs. GO
Match: - (symbol:RORB "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0003707 "steroid hormone receptor activity" evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0042462 "eye photoreceptor cell development" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive regulation of transcription, DNA-templated" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0045893 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0006357 GO:GO:0006366 GO:GO:0030522 GO:GO:0042462 GeneTree:ENSGT00740000114909 OrthoDB:EOG79PJNW TreeFam:TF319910 OMA:WEQLHDY EMBL:AAEX03000553 EMBL:AAEX03000554 Ensembl:ENSCAFT00000036494 Uniprot:F1PET8) HSP 1 Score: 151.754 bits (382), Expect = 3.267e-38 Identity = 62/77 (80.52%), Postives = 70/77 (90.91%), Query Frame = 0
Query: 40 AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDG 116
AQIE+IPCK+CGDKSSG+HYGVITCEGCKGFFRRSQ + +Y CPRQ+NC++DR NRNRCQ CRLQKCLALGMSRD
Sbjct: 14 AQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQKCLALGMSRDA 90 HSP 2 Score: 102.834 bits (255), Expect = 8.192e-22 Identity = 77/248 (31.05%), Postives = 116/248 (46.77%), Query Frame = 0
Query: 463 DRIGVLLTNSIFEAHTRTSLLTRSQIHEQCKQGVDQVKLYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVIRMSRYFDLSQNAVLFFDIMLPMESFMTTGDTGEMNLVNQIFDLAK------------AVF-------------------QTLQRELTNRPPMVPTKG--DVSVLTKLLNKRHTLREINFLHTEALTRFRSGNGSMIE--FPALYRELFSSD 675
DRI +I ++H T T ++H+ Q ++ +++ S+E LW A ++T+ IQ ++EFAK + GFM+ Q+DQI LLK G E+ ++RM R F+ N VLF M+ F G +LVN+ FD AK A+F Q LQ ++ V K D L KL+ K T+ + LH E L F+ + ++ FP LY+ELF+ D
Sbjct: 224 DRIA----QNIIKSHLETCQYTMEELHQLAWQTHTYEEIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSD---DLVNEAFDFAKNLCSLQLTEEEIALFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKLIAKIPTITAVCNLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPD 464
BLAST of EMLSAG00000000733 vs. GO
Match: - (symbol:RORA "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0003707 "steroid hormone receptor activity" evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006809 "nitric oxide biosynthetic process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0021702 "cerebellar Purkinje cell differentiation" evidence=IEA] [GO:0043030 "regulation of macrophage activation" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA] [GO:0046068 "cGMP metabolic process" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0006366 GO:GO:0030522 GO:GO:0006809 GO:GO:0021702 GO:GO:0046068 GO:GO:0043030 GeneTree:ENSGT00740000114909 OMA:GHCLTGQ OrthoDB:EOG79PJNW TreeFam:TF319910 EMBL:CU571371 EMBL:CU618323 Ensembl:ENSSSCT00000005055 Uniprot:F1S075) HSP 1 Score: 152.14 bits (383), Expect = 4.455e-38 Identity = 63/78 (80.77%), Postives = 69/78 (88.46%), Query Frame = 0
Query: 39 NAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDG 116
AQIEIIPCK+CGDKSSG+HYGVITCEGCKGFFRRSQ S Y CPRQKNC++DR +RNRCQ CRLQKCLA+GMSRD
Sbjct: 2 KAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDA 79 HSP 2 Score: 101.679 bits (252), Expect = 2.531e-21 Identity = 75/240 (31.25%), Postives = 117/240 (48.75%), Query Frame = 0
Query: 469 LTNSIFEAHTRTSLLTRSQIHEQCKQGVDQVKLYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVIRMSRYFDLSQNAVLFFD---------IMLPMESFMT-TGDTGE----MNLVNQIFDL---------------AKAVFQTLQRELTNRPPMVPTKG--DVSVLTKLLNKRHTLREINFLHTEALTRFRSGNGSMIE--FPALYRELFSSD 675
L +I ++H T R ++ + Q Q ++ ++N +E +W A K+T IQ ++EFAK + GFM+ Q+DQI LLK G+ E+ IRM R FD SQN ++FD L E F++ + G+ M+L L K + LQ+++ V K + +LTKL+ K TLR + HTE L F++ ++ FP LY+ELF+S+
Sbjct: 259 LAQNISKSHLETCQYLREELQQITWQTFLQEEIENYQNKQREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFD-SQNNTVYFDGKYASPDVFKSLGCEDFISFVFEFGKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSE 497
BLAST of EMLSAG00000000733 vs. C. finmarchicus
Match: gi|592807260|gb|GAXK01147308.1| (TSA: Calanus finmarchicus comp43280_c0_seq2 transcribed RNA sequence) HSP 1 Score: 247.284 bits (630), Expect = 1.095e-68 Identity = 134/277 (48.38%), Postives = 175/277 (63.18%), Query Frame = 0
Query: 451 HELYLLQEELQND--RIGVLLTNSIFEAHTRTSLLTRSQIHEQCKQGVDQVKLYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVIRMSRYFDLSQNAVLFF---------DIMLPMESFMTTGDTGEMNLVNQIFDLAKA---------------------------------------VFQTLQRELTNRPPMVPTKGDVSVLTKLLNKRHTLREINFLHTEALTRFRSGNGSMI--EFPALYRELFSSD 675
H+ L +++QND +IG LL++SIFEAH RT LL+R QI QG+++ K+ F+ M E+LW+CAAQ+LTNVIQQIIEFAKMVPGFM+FPQ+DQI LLK G+FELAV+RMSRYFD+S N VLF MLPME+F TTG+T EM LV+QIFD AKA V +LQREL + P + K +VS ++ L+NKRH LRE++F+H + L++F+ S + +FPALY ELFS+D
Sbjct: 600 HQENLYLQDVQNDPDKIGQLLSDSIFEAHQRTCLLSREQIQVGWSQGINEYKVDQFRKMPSEDLWICAAQRLTNVIQQIIEFAKMVPGFMQFPQEDQIVLLKAGSFELAVLRMSRYFDMSNNHVLFVGDHTQLLEKSFMLPMEAFTTTGNTEEMTLVSQIFDTAKAIADLKLSEVALSLYSAYVLLQADRPGLKNLEEIRKLNDAVCNSLQRELMHNPSLQHIKEEVSTISLLMNKRHILRELSFMHLDVLSKFKRNCSSQMTDKFPALYGELFSTD 1430 HSP 2 Score: 49.2914 bits (116), Expect = 5.129e-5 Identity = 38/100 (38.00%), Postives = 44/100 (44.00%), Query Frame = 0
Query: 97 NRCQFCRLQKCLALGMSRDGG--GALXPSGRSS---------------HNGNSPDSSCFDTQQQPSSTDMSYEG-GGATSGFSYGSDLSPYNGGYTFTNI 178
NRCQFCRLQKC+ALGMSRD G + R +G SPD Q P ST S + G GF Y D+ Y Y FT +
Sbjct: 3 NRCQFCRLQKCMALGMSRDAVKFGRMSKKQREKVEEEVNFHQSQSRLRTSGTSPDP-----WQGPDSTAPSNDSIGYPNQGFQY-PDIQ-YPNQYPFTQV 281
BLAST of EMLSAG00000000733 vs. C. finmarchicus
Match: gi|592807261|gb|GAXK01147307.1| (TSA: Calanus finmarchicus comp43280_c0_seq1 transcribed RNA sequence) HSP 1 Score: 247.284 bits (630), Expect = 1.142e-68 Identity = 134/277 (48.38%), Postives = 175/277 (63.18%), Query Frame = 0
Query: 451 HELYLLQEELQND--RIGVLLTNSIFEAHTRTSLLTRSQIHEQCKQGVDQVKLYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVIRMSRYFDLSQNAVLFF---------DIMLPMESFMTTGDTGEMNLVNQIFDLAKA---------------------------------------VFQTLQRELTNRPPMVPTKGDVSVLTKLLNKRHTLREINFLHTEALTRFRSGNGSMI--EFPALYRELFSSD 675
H+ L +++QND +IG LL++SIFEAH RT LL+R QI QG+++ K+ F+ M E+LW+CAAQ+LTNVIQQIIEFAKMVPGFM+FPQ+DQI LLK G+FELAV+RMSRYFD+S N VLF MLPME+F TTG+T EM LV+QIFD AKA V +LQREL + P + K +VS ++ L+NKRH LRE++F+H + L++F+ S + +FPALY ELFS+D
Sbjct: 600 HQENLYLQDVQNDPDKIGQLLSDSIFEAHQRTCLLSREQIQVGWSQGINEYKVDQFRKMPSEDLWICAAQRLTNVIQQIIEFAKMVPGFMQFPQEDQIVLLKAGSFELAVLRMSRYFDMSNNHVLFVGDHTQLLEKSFMLPMEAFTTTGNTEEMTLVSQIFDTAKAIADLKLSEVALSLYSAYVLLQADRPGLKNLEEIRKLNDAVCNSLQRELMHNPSLQHIKEEVSTISLLMNKRHILRELSFMHLDVLSKFKRNCSSQMTDKFPALYGELFSTD 1430 HSP 2 Score: 49.2914 bits (116), Expect = 5.134e-5 Identity = 38/100 (38.00%), Postives = 44/100 (44.00%), Query Frame = 0
Query: 97 NRCQFCRLQKCLALGMSRDGG--GALXPSGRSS---------------HNGNSPDSSCFDTQQQPSSTDMSYEG-GGATSGFSYGSDLSPYNGGYTFTNI 178
NRCQFCRLQKC+ALGMSRD G + R +G SPD Q P ST S + G GF Y D+ Y Y FT +
Sbjct: 3 NRCQFCRLQKCMALGMSRDAVKFGRMSKKQREKVEEEVNFHQSQSRLRTSGTSPDP-----WQGPDSTAPSNDSIGYPNQGFQY-PDIQ-YPNQYPFTQV 281
BLAST of EMLSAG00000000733 vs. C. finmarchicus
Match: gi|592939042|gb|GAXK01019511.1| (TSA: Calanus finmarchicus comp80941_c0_seq6 transcribed RNA sequence) HSP 1 Score: 124.405 bits (311), Expect = 2.086e-31 Identity = 56/64 (87.50%), Postives = 60/64 (93.75%), Query Frame = 0
Query: 32 DSNNSVHNAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVN 95
+S +S+ N QIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSV NYQCPRQKNC+VDRVN
Sbjct: 333 ESTDSMLNPQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVTNYQCPRQKNCVVDRVN 524
BLAST of EMLSAG00000000733 vs. C. finmarchicus
Match: gi|592939043|gb|GAXK01019510.1| (TSA: Calanus finmarchicus comp80941_c0_seq5 transcribed RNA sequence) HSP 1 Score: 124.405 bits (311), Expect = 1.151e-30 Identity = 56/64 (87.50%), Postives = 60/64 (93.75%), Query Frame = 0
Query: 32 DSNNSVHNAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVN 95
+S +S+ N QIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSV NYQCPRQKNC+VDRVN
Sbjct: 551 ESTDSMLNPQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVTNYQCPRQKNCVVDRVN 742
BLAST of EMLSAG00000000733 vs. C. finmarchicus
Match: gi|592939046|gb|GAXK01019507.1| (TSA: Calanus finmarchicus comp80941_c0_seq2 transcribed RNA sequence) HSP 1 Score: 123.635 bits (309), Expect = 4.836e-29 Identity = 54/57 (94.74%), Postives = 55/57 (96.49%), Query Frame = 0
Query: 39 NAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVN 95
AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSV NYQCPRQKNC+VDRVN
Sbjct: 1314 KAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVTNYQCPRQKNCVVDRVN 1484
BLAST of EMLSAG00000000733 vs. C. finmarchicus
Match: gi|592939047|gb|GAXK01019506.1| (TSA: Calanus finmarchicus comp80941_c0_seq1 transcribed RNA sequence) HSP 1 Score: 124.02 bits (310), Expect = 5.351e-29 Identity = 54/57 (94.74%), Postives = 55/57 (96.49%), Query Frame = 0
Query: 39 NAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVN 95
AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSV NYQCPRQKNC+VDRVN
Sbjct: 1377 KAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVTNYQCPRQKNCVVDRVN 1547
BLAST of EMLSAG00000000733 vs. C. finmarchicus
Match: gi|592939044|gb|GAXK01019509.1| (TSA: Calanus finmarchicus comp80941_c0_seq4 transcribed RNA sequence) HSP 1 Score: 122.094 bits (305), Expect = 6.739e-29 Identity = 54/56 (96.43%), Postives = 55/56 (98.21%), Query Frame = 0
Query: 40 AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVN 95
AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSV NYQCPRQKNC+VDRVN
Sbjct: 1010 AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVTNYQCPRQKNCVVDRVN 1177
BLAST of EMLSAG00000000733 vs. C. finmarchicus
Match: gi|592939045|gb|GAXK01019508.1| (TSA: Calanus finmarchicus comp80941_c0_seq3 transcribed RNA sequence) HSP 1 Score: 120.939 bits (302), Expect = 1.722e-28 Identity = 53/55 (96.36%), Postives = 54/55 (98.18%), Query Frame = 0
Query: 41 QIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVN 95
QIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSV NYQCPRQKNC+VDRVN
Sbjct: 1067 QIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVTNYQCPRQKNCVVDRVN 1231
BLAST of EMLSAG00000000733 vs. C. finmarchicus
Match: gi|592810747|gb|GAXK01143821.1| (TSA: Calanus finmarchicus comp480929_c1_seq2 transcribed RNA sequence) HSP 1 Score: 120.939 bits (302), Expect = 2.227e-27 Identity = 48/74 (64.86%), Postives = 60/74 (81.08%), Query Frame = 0
Query: 43 EIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDG 116
+ +PC+VCGDK+SG HYGV +CEGCKGFFRRS + Y+C R + C+V R+NRNRCQFCR QKCLA+GMSR+
Sbjct: 798 QWVPCRVCGDKASGYHYGVTSCEGCKGFFRRSIQRSLEYKCLRDEKCLVIRLNRNRCQFCRFQKCLAVGMSRES 1019 HSP 2 Score: 43.8986 bits (102), Expect = 1.736e-3 Identity = 19/48 (39.58%), Postives = 29/48 (60.42%), Query Frame = 0
Query: 512 LWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVI 559
+W A + + I I+EFAK +PGF +DQ+ L+K G+F + VI
Sbjct: 471 IWKEFAGHMNDSIHDIVEFAKRMPGFANLCHEDQLVLVKQGSFSVWVI 614
BLAST of EMLSAG00000000733 vs. C. finmarchicus
Match: gi|592810748|gb|GAXK01143820.1| (TSA: Calanus finmarchicus comp480929_c1_seq1 transcribed RNA sequence) HSP 1 Score: 120.939 bits (302), Expect = 2.244e-27 Identity = 48/74 (64.86%), Postives = 60/74 (81.08%), Query Frame = 0
Query: 43 EIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDG 116
+ +PC+VCGDK+SG HYGV +CEGCKGFFRRS + Y+C R + C+V R+NRNRCQFCR QKCLA+GMSR+
Sbjct: 798 QWVPCRVCGDKASGYHYGVTSCEGCKGFFRRSIQRSLEYKCLRDEKCLVIRLNRNRCQFCRFQKCLAVGMSRES 1019 HSP 2 Score: 43.8986 bits (102), Expect = 1.739e-3 Identity = 19/48 (39.58%), Postives = 29/48 (60.42%), Query Frame = 0
Query: 512 LWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVI 559
+W A + + I I+EFAK +PGF +DQ+ L+K G+F + VI
Sbjct: 471 IWKEFAGHMNDSIHDIVEFAKRMPGFANLCHEDQLVLVKQGSFSVWVI 614
BLAST of EMLSAG00000000733 vs. L. salmonis peptides
Match: EMLSAP00000000733 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1117:84476:96586:1 gene:EMLSAG00000000733 transcript:EMLSAT00000000733 description:"maker-LSalAtl2s1117-snap-gene-1.23") HSP 1 Score: 1382.47 bits (3577), Expect = 0.000e+0 Identity = 678/678 (100.00%), Postives = 678/678 (100.00%), Query Frame = 0
Query: 1 MKIKNRECDSLLEISNSLYNTRSGNSACGGSDSNNSVHNAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDGGGALXPSGRSSHNGNSPDSSCFDTQQQPSSTDMSYEGGGATSGFSYGSDLSPYNGGYTFTNIPPPPHPPPPPPQQQHPQPGSEWTDYGNVXSTTSPFXSRSTPLDIPNPNNTNSSNSNNNNNNNNSSNSGGIHGAPGPPESRIPSTSTASTSSSSSSSSSSSTSTSTTTTSSSGSASRHNNNNTSTAAIPKAESPSTLVAVPGMKHPSQTSYGSSNRIGMTIKQEVTDMISGQTHLEGREEEDPLSMGYDVDSTSNFATHQPSKSHHHLQPPPHPPSLHPSHHQPNHPSHHHPHPAXQQXQPPVHTQXXQPQAQQHPGHHHHPSGSFSSGMHNNHELYLLQEELQNDRIGVLLTNSIFEAHTRTSLLTRSQIHEQCKQGVDQVKLYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVIRMSRYFDLSQNAVLFFDIMLPMESFMTTGDTGEMNLVNQIFDLAKAVFQTLQRELTNRPPMVPTKGDVSVLTKLLNKRHTLREINFLHTEALTRFRSGNGSMIEFPALYRELFSSDHPS 678
MKIKNRECDSLLEISNSLYNTRSGNSACGGSDSNNSVHNAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDGGGALXPSGRSSHNGNSPDSSCFDTQQQPSSTDMSYEGGGATSGFSYGSDLSPYNGGYTFTNIPPPPHPPPPPPQQQHPQPGSEWTDYGNVXSTTSPFXSRSTPLDIPNPNNTNSSNSNNNNNNNNSSNSGGIHGAPGPPESRIPSTSTASTSSSSSSSSSSSTSTSTTTTSSSGSASRHNNNNTSTAAIPKAESPSTLVAVPGMKHPSQTSYGSSNRIGMTIKQEVTDMISGQTHLEGREEEDPLSMGYDVDSTSNFATHQPSKSHHHLQPPPHPPSLHPSHHQPNHPSHHHPHPAXQQXQPPVHTQXXQPQAQQHPGHHHHPSGSFSSGMHNNHELYLLQEELQNDRIGVLLTNSIFEAHTRTSLLTRSQIHEQCKQGVDQVKLYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVIRMSRYFDLSQNAVLFFDIMLPMESFMTTGDTGEMNLVNQIFDLAKAVFQTLQRELTNRPPMVPTKGDVSVLTKLLNKRHTLREINFLHTEALTRFRSGNGSMIEFPALYRELFSSDHPS
Sbjct: 1 MKIKNRECDSLLEISNSLYNTRSGNSACGGSDSNNSVHNAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDGGGALXPSGRSSHNGNSPDSSCFDTQQQPSSTDMSYEGGGATSGFSYGSDLSPYNGGYTFTNIPPPPHPPPPPPQQQHPQPGSEWTDYGNVXSTTSPFXSRSTPLDIPNPNNTNSSNSNNNNNNNNSSNSGGIHGAPGPPESRIPSTSTASTSSSSSSSSSSSTSTSTTTTSSSGSASRHNNNNTSTAAIPKAESPSTLVAVPGMKHPSQTSYGSSNRIGMTIKQEVTDMISGQTHLEGREEEDPLSMGYDVDSTSNFATHQPSKSHHHLQPPPHPPSLHPSHHQPNHPSHHHPHPAXQQXQPPVHTQXXQPQAQQHPGHHHHPSGSFSSGMHNNHELYLLQEELQNDRIGVLLTNSIFEAHTRTSLLTRSQIHEQCKQGVDQVKLYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVIRMSRYFDLSQNAVLFFDIMLPMESFMTTGDTGEMNLVNQIFDLAKAVFQTLQRELTNRPPMVPTKGDVSVLTKLLNKRHTLREINFLHTEALTRFRSGNGSMIEFPALYRELFSSDHPS 678
BLAST of EMLSAG00000000733 vs. L. salmonis peptides
Match: EMLSAP00000012486 (pep:novel supercontig:LSalAtl2s:LSalAtl2s91:348479:353390:-1 gene:EMLSAG00000012486 transcript:EMLSAT00000012486 description:"maker-LSalAtl2s91-snap-gene-4.8") HSP 1 Score: 105.916 bits (263), Expect = 7.131e-24 Identity = 43/69 (62.32%), Postives = 53/69 (76.81%), Query Frame = 0
Query: 44 IIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGM 112
I C VCGD++SG HYG I+CEGCKGFF+RS + YQC K+C V + +RNRCQ+CRLQKCLA+GM
Sbjct: 217 IEACVVCGDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGM 285
BLAST of EMLSAG00000000733 vs. L. salmonis peptides
Match: EMLSAP00000001919 (pep:novel supercontig:LSalAtl2s:LSalAtl2s132:616435:622808:1 gene:EMLSAG00000001919 transcript:EMLSAT00000001919 description:"augustus_masked-LSalAtl2s132-processed-gene-6.5") HSP 1 Score: 100.908 bits (250), Expect = 7.138e-23 Identity = 36/70 (51.43%), Postives = 50/70 (71.43%), Query Frame = 0
Query: 47 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDG 116
C +CGD++SG HYGV +CEGCKGFF+R+ + Y C ++C++D+ RNRCQ+CR KCL GM R+
Sbjct: 91 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKELTYACRENRDCVIDKRQRNRCQYCRYMKCLDTGMKREA 160
BLAST of EMLSAG00000000733 vs. L. salmonis peptides
Match: EMLSAP00000013004 (pep:novel supercontig:LSalAtl2s:LSalAtl2s98:942409:953748:1 gene:EMLSAG00000013004 transcript:EMLSAT00000013004 description:"augustus_masked-LSalAtl2s98-processed-gene-9.1") HSP 1 Score: 101.679 bits (252), Expect = 1.649e-22 Identity = 41/69 (59.42%), Postives = 49/69 (71.01%), Query Frame = 0
Query: 47 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRD 115
C VCGD ++ HYGV TCEGCKGFF+R+ Y C KNC VD+ RNRCQFCR QKCLA+GM ++
Sbjct: 409 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKE 477
BLAST of EMLSAG00000000733 vs. L. salmonis peptides
Match: EMLSAP00000009941 (pep:novel supercontig:LSalAtl2s:LSalAtl2s649:484085:485655:-1 gene:EMLSAG00000009941 transcript:EMLSAT00000009941 description:"maker-LSalAtl2s649-snap-gene-4.11") HSP 1 Score: 98.5969 bits (244), Expect = 2.328e-22 Identity = 43/72 (59.72%), Postives = 51/72 (70.83%), Query Frame = 0
Query: 45 IPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDG 116
I C VCGDKSSG HYG TCEGCK FF+RS + YQC KNC VD+ +RN+CQ CRL+KC +GM R+
Sbjct: 81 INCVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYQCRGSKNCPVDQHHRNQCQHCRLKKCFKMGMRREA 152
BLAST of EMLSAG00000000733 vs. L. salmonis peptides
Match: EMLSAP00000009969 (pep:novel supercontig:LSalAtl2s:LSalAtl2s651:302705:304416:-1 gene:EMLSAG00000009969 transcript:EMLSAT00000009969 description:"maker-LSalAtl2s651-augustus-gene-2.5") HSP 1 Score: 95.5153 bits (236), Expect = 6.070e-21 Identity = 41/78 (52.56%), Postives = 55/78 (70.51%), Query Frame = 0
Query: 39 NAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDG 116
N+ EI+ C VCGDKSSG HYG TCEGCK FF+R + +QC +K+C VD+ +RN+CQ CR +KCL +GM ++
Sbjct: 68 NSSTEIL-CVVCGDKSSGKHYGQFTCEGCKSFFKRCVRRSLTFQCRSKKSCPVDQHHRNQCQHCRFKKCLNMGMKKEA 144
BLAST of EMLSAG00000000733 vs. L. salmonis peptides
Match: EMLSAP00000008543 (pep:novel supercontig:LSalAtl2s:LSalAtl2s527:163002:172818:1 gene:EMLSAG00000008543 transcript:EMLSAT00000008543 description:"maker-LSalAtl2s527-augustus-gene-1.53") HSP 1 Score: 96.2857 bits (238), Expect = 8.209e-21 Identity = 39/84 (46.43%), Postives = 55/84 (65.48%), Query Frame = 0
Query: 29 GGSDSNNSVHNAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGM 112
G D+NN Q ++ C +C D+++G+HYG+ITCEGCKGFF+R+ + Y C C +++ RNRCQ+CR QKCL GM
Sbjct: 266 GPGDNNNPSSQPQQSLV-CMICEDRATGLHYGIITCEGCKGFFKRTVQNKRIYTCVADGECEINKAQRNRCQYCRFQKCLQKGM 348
BLAST of EMLSAG00000000733 vs. L. salmonis peptides
Match: EMLSAP00000009940 (pep:novel supercontig:LSalAtl2s:LSalAtl2s649:353131:422335:-1 gene:EMLSAG00000009940 transcript:EMLSAT00000009940 description:"maker-LSalAtl2s649-augustus-gene-4.7") HSP 1 Score: 96.2857 bits (238), Expect = 8.613e-21 Identity = 39/72 (54.17%), Postives = 52/72 (72.22%), Query Frame = 0
Query: 45 IPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDG 116
I C VCGDKSSG HYG TCEGCK FF+RS + YQC ++C +D+ +RN+CQ CRL+KC+ +GM ++
Sbjct: 432 ISCVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRALTYQCRGSRSCPIDQHHRNQCQHCRLKKCIKMGMRKEA 503
BLAST of EMLSAG00000000733 vs. L. salmonis peptides
Match: EMLSAP00000008902 (pep:novel supercontig:LSalAtl2s:LSalAtl2s554:572309:581835:1 gene:EMLSAG00000008902 transcript:EMLSAT00000008902 description:"maker-LSalAtl2s554-snap-gene-5.6") HSP 1 Score: 94.7449 bits (234), Expect = 1.557e-20 Identity = 35/70 (50.00%), Postives = 48/70 (68.57%), Query Frame = 0
Query: 47 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDG 116
C VCGDK SG HYG++TCE CKGFF+R+ + Y C ++C++D+ R RC +CR QKCL +GM +
Sbjct: 186 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVADRSCVIDKTQRKRCPYCRFQKCLDVGMKLEA 255
BLAST of EMLSAG00000000733 vs. L. salmonis peptides
Match: EMLSAP00000005090 (pep:novel supercontig:LSalAtl2s:LSalAtl2s269:306853:308464:-1 gene:EMLSAG00000005090 transcript:EMLSAT00000005090 description:"augustus_masked-LSalAtl2s269-processed-gene-3.0") HSP 1 Score: 90.5077 bits (223), Expect = 3.113e-19 Identity = 36/66 (54.55%), Postives = 44/66 (66.67%), Query Frame = 0
Query: 47 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGM 112
C VCGD++SG HY + CEGCKGFFRRS + NY C +C +D R +CQ CRL+KC A GM
Sbjct: 173 CLVCGDRASGYHYNALACEGCKGFFRRSITKNSNYTCKWNGDCEIDMYMRRKCQACRLKKCYATGM 238
BLAST of EMLSAG00000000733 vs. SwissProt
Match: gi|399369|sp|P31396.1|HR3_DROME (RecName: Full=Probable nuclear hormone receptor HR3; Short=dHR3; AltName: Full=Nuclear receptor subfamily 1 group F member 4) HSP 1 Score: 186.037 bits (471), Expect = 1.884e-50 Identity = 107/251 (42.63%), Postives = 153/251 (60.96%), Query Frame = 0
Query: 465 IGVLLTNSIFEAHTRTSLLTRSQIHEQCKQGVDQVKLYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVIRMSRYFDLSQNAVLFFDIMLPMESFMTTGDTGEMNLVNQIFDLAK------------AVFQTL---------------------------QREL-TNRPPMVPTKGDVSVLTKLLNKRHTLREINFLHTEALTRFRSGNGSMIEFPALYRELFSSD 675
I +L ++ EAH T+ + +H+ ++ D ++ +KN+ QEELWL A+KLT +IQ IIEFAK++PGFM+ QDDQI LLK G+FELA++RMSR DLSQNAVL+ D+MLP E+F T+ D+ EM LV++IF AK A++Q+L ++EL TN P+ KGDV+VL LLN R+I+ LH E+L++F+ + +++ FPALY+ELFS D
Sbjct: 237 INDVLIKTLAEAHANTNTKLEA-VHDMFRKQPDVSRILYYKNLGQEELWLDCAEKLTQMIQNIIEFAKLIPGFMRLSQDDQILLLKTGSFELAIVRMSRLLDLSQNAVLYGDVMLPQEAFYTS-DSEEMRLVSRIFQTAKSIAELKLTETELALYQSLVLLWPERNGVRGNTEIQRLFNLSMNAIRQELETNHAPL---KGDVTVLDTLLNNIPNFRDISILHMESLSKFKLQHPNVV-FPALYKELFSID 481 HSP 2 Score: 184.496 bits (467), Expect = 7.574e-50 Identity = 100/177 (56.50%), Postives = 116/177 (65.54%), Query Frame = 0
Query: 26 SACGGSDSNNSVHNAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDGG--GALXPSGRS--------------SHNGNSPDSSCFDTQQQPSSTDM-------SYEGGGATSGFSYGSDLSPYNGGYTFTNIP 179
S G ++S+ S+ AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPR K C+VDRVNRNRCQ+CRLQKCL LGMSRD G + R + + +PDSS +DT Q PSS+D SY GG + + YG SPY GY+ + P
Sbjct: 31 SPAGQNNSSGSI-KAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRNKQCVVDRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKKQREKVEDEVRFHRAQMRAQSDAAPDSSVYDT-QTPSSSDQLHHNNYNSYSGGYSNNEVGYG---SPY--GYSASVTP 200
BLAST of EMLSAG00000000733 vs. SwissProt
Match: gi|585482|sp|Q08882.1|HR3_MANSE (RecName: Full=Probable nuclear hormone receptor HR3; Short=mHR3; AltName: Full=Nuclear receptor subfamily 1 group F member 4) HSP 1 Score: 174.481 bits (441), Expect = 7.624e-46 Identity = 96/165 (58.18%), Postives = 109/165 (66.06%), Query Frame = 0
Query: 35 NSVHNAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDGG--GALXPSGRS--------------SHNGNSPDSSCFDTQQQ-PSSTDMSYEGGGATSGF-SYGSDLSPYNGGYTFTNIPPP 181
NS+ AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQS+VVNYQCPR K C+VDRVNRNRCQ+CRLQKCL LGMSRD G + R + N +PD S +D QQQ PSS+D + G +G+ Y S LS Y + N PP
Sbjct: 93 NSI-RAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVDRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKKQREKVEDEVRYHKAQMRAQNDAAPD-SVYDAQQQTPSSSDQFH---GHYNGYPGYASPLSSYG----YNNAGPP 248 HSP 2 Score: 157.918 bits (398), Expect = 4.963e-40 Identity = 94/248 (37.90%), Postives = 135/248 (54.44%), Query Frame = 0
Query: 465 IGVLLTNSIFEAHTRTSLLTRSQIHEQCKQGVDQVKLYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVIRMSRYFDLSQNAVLFFDIMLPMESFMTTGDTGEMNLVNQIFDLAKAV--FQTLQRELTNRPPMV-----------------------------------PTKGDVSVLTKLLNKRHTLREINFLHTEALTRFRSGNGSMIEFPALYRELFSSD 675
I +L S+ E H T+ I+E + D KL + +M+ EE+WL A KLT +IQ IIEFAK++PGFMK QDDQI LLK G+FELA++R+SR D+++ VL+ D++LP+ + D +M LV+ IF+ AK++ + + EL +V P KGDV+VL LL K T RE++ +H AL+RF+ + + FPALY+ELFS D
Sbjct: 295 ISKVLVKSLAERHANTNP-KLEYINEMFSKPQDVSKLLFYNSMTYEEMWLDCADKLTAMIQNIIEFAKLIPGFMKLTQDDQILLLKSGSFELAIVRLSRLIDVNREQVLYGDVVLPIRECVHARDPRDMALVSGIFEAAKSIARLKLTESELALYQSLVLLWPERHGVMGNTEIRCLFNMSMSAMRHEIEANHAPLKGDVTVLDTLLAKIPTFRELSLMHLGALSRFKMTHPHHV-FPALYKELFSLD 540
BLAST of EMLSAG00000000733 vs. SwissProt
Match: gi|1708295|sp|P49868.1|HR3_GALME (RecName: Full=Probable nuclear hormone receptor HR3; Short=gHR3; AltName: Full=Nuclear receptor subfamily 1 group F member 4) HSP 1 Score: 170.629 bits (431), Expect = 2.021e-44 Identity = 93/158 (58.86%), Postives = 106/158 (67.09%), Query Frame = 0
Query: 33 SNNSVHNAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDGG--GALXPSGRS--------------SHNGNSPDSSCFDTQQQ-PSSTDMSYEGGGATSGF-SYGSDLSPYNGG 172
+ NS+ AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQS+VVNYQCPR K C+VDRVNRNRCQ+CRLQKCL LGMSRD G + R + +PD S +D QQQ PSS+D + G +G+ Y S LS Y G
Sbjct: 95 AANSI-RAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVDRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKKQREKVEDEVRYHRAQMRAQTDAAPD-SVYDAQQQTPSSSDQFH---GHYNGYPGYRSPLSSYGYG 247 HSP 2 Score: 167.548 bits (423), Expect = 2.631e-43 Identity = 98/248 (39.52%), Postives = 139/248 (56.05%), Query Frame = 0
Query: 465 IGVLLTNSIFEAHTRTSLLTRSQIHEQCKQGVDQVKLYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVIRMSRYFDLSQNAVLFFDIMLPMESFMTTGDTGEMNLVNQIFDLAK------------AVFQTL-----QRELTNRPPMV--------------------PTKGDVSVLTKLLNKRHTLREINFLHTEALTRFRSGNGSMIEFPALYRELFSSD 675
I +L S+ EAH T+ +HE ++ D KL + +M+ EE+WL A KLT +IQ IIEFAK++PGFMK QDDQI LLK G+FELA++R+SR D+++ VL+ D++LP+ + D ++ LV IFD AK A++Q+L +R P + P KGDV+VL LL K T RE++ +H EAL RF++ + + FPALY+ELFS D
Sbjct: 304 ISKVLVKSLAEAHANTNP-KLEYVHEMFRKPPDVSKLLFYNSMTYEEMWLDCADKLTGMIQNIIEFAKLIPGFMKLSQDDQILLLKSGSFELAIVRLSRLIDVNREQVLYGDVVLPIRECVHARDPRDVTLVVGIFDAAKTIERLKLTETELALYQSLVLLWPERHGVRGNPEIQCLFNMSMAAMRHEIESNHAPLKGDVTVLDTLLAKIPTFRELSLMHLEALCRFKAAHPHHV-FPALYKELFSLD 549
BLAST of EMLSAG00000000733 vs. SwissProt
Match: gi|24418858|sp|P41828.2|NHR23_CAEEL (RecName: Full=Nuclear hormone receptor family member nhr-23; AltName: Full=Steroid hormone receptor family member chr-3) HSP 1 Score: 168.703 bits (426), Expect = 1.687e-43 Identity = 82/146 (56.16%), Postives = 96/146 (65.75%), Query Frame = 0
Query: 39 NAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDGGGALXPSGRSSHNGNSPDSSCFDTQQQPSSTDMSYEGGGATSGFSYGSDLSPYNGGYTFTNIPPPPHP 184
+AQIE+IPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSS+VNYQCPRQKNC+VDRVNRNRCQ+CRL+KC+ LGMSRD GR S Q++ ++ A +G Y + Y+ PPP HP
Sbjct: 155 SAQIEVIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSIVNYQCPRQKNCVVDRVNRNRCQYCRLKKCIELGMSRDA----VKFGRMSKK-----------QREKVEDEVRMHKELAANGLGYQAIYGDYS--------PPPSHP 277 HSP 2 Score: 82.4185 bits (202), Expect = 3.493e-15 Identity = 64/225 (28.44%), Postives = 100/225 (44.44%), Query Frame = 0
Query: 493 KQGVDQVKLYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVIRMSRYFDLSQNAVLFFDIMLPMESFMTTGDTGEMNLVNQ-------------------------------------IFDLAK-AVFQTLQRELTNRPPMVPTKGDVS-VLTKLLNKRHTLREINFLHTEALTRFRSGNGSMIE-FPALYRELFSSDHP 677
+ GV V ++S+ W A++L +IQ IIEFAK + GFM PQ+ QI LLKG FEL+++ + Y+++ AV +P + D EM L+ + I D A A +TL+ L ++P G + + ++ + +R+ LH EAL FR + + E PALY+ELF++D P
Sbjct: 367 QHGVCNVDPDCIPHLSRAGGWELFARELNPLIQAIIEFAKSIDGFMNLPQETQIQLLKGSVFELSLVFAAMYYNVDAQAVCGERYSVPFACLIAEDD-AEMQLIVEVNNTLQEIVHLQPHQSELALLAAGLILEQVSSSHGIGILDTATIATAETLKNALYQ--SVMPRIGCMEDTIHRIQDVETRIRQTARLHQEALQNFRMSDPTSSEKLPALYKELFTADRP 588
BLAST of EMLSAG00000000733 vs. SwissProt
Match: gi|1710637|sp|P51448.1|RORA_MOUSE (RecName: Full=Nuclear receptor ROR-alpha; AltName: Full=Nuclear receptor RZR-alpha; AltName: Full=Nuclear receptor subfamily 1 group F member 1; AltName: Full=RAR-related orphan receptor A; AltName: Full=Retinoid-related orphan receptor-alpha) HSP 1 Score: 154.066 bits (388), Expect = 7.462e-39 Identity = 64/87 (73.56%), Postives = 71/87 (81.61%), Query Frame = 0
Query: 30 GSDSNNSVHNAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDG 116
G H +QIEIIPCK+CGDKSSG+HYGVITCEGCKGFFRRSQ S Y CPRQKNC++DR +RNRCQ CRLQKCLA+GMSRD
Sbjct: 56 GISVTKKTHTSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDA 142 HSP 2 Score: 103.99 bits (258), Expect = 3.857e-22 Identity = 70/242 (28.93%), Postives = 112/242 (46.28%), Query Frame = 0
Query: 469 LTNSIFEAHTRTSLLTRSQIHEQCKQGVDQVKLYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVIRMSRYFDLSQNAVLFFDIMLPMESFMTTGDTGEMNLVNQIFDLAKAV--FQTLQRELTNRPPMVPTKGDVS-------------------------------VLTKLLNKRHTLREINFLHTEALTRFRSGNGSMIE--FPALYRELFSSD 675
L +I ++H T R ++ + Q Q ++ ++N +E +W A K+T IQ ++EFAK + GFM+ Q+DQI LLK G+ E+ IRM R FD SQN ++FD + G + ++ +F+ K++ + E+ V D S +LTKL+ K TLR + HTE L F++ ++ FP LY+ELF+S+
Sbjct: 276 LAQNISKSHLETCQYLREELQQITWQTFLQEEIENYQNKQREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFD-SQNNTVYFDGKYASPDVFKS--LGCEDFISFVFEFGKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSE 514
BLAST of EMLSAG00000000733 vs. SwissProt
Match: gi|613504304|sp|P35398.2|RORA_HUMAN (RecName: Full=Nuclear receptor ROR-alpha; AltName: Full=Nuclear receptor RZR-alpha; AltName: Full=Nuclear receptor subfamily 1 group F member 1; AltName: Full=RAR-related orphan receptor A; AltName: Full=Retinoid-related orphan receptor-alpha) HSP 1 Score: 154.066 bits (388), Expect = 8.134e-39 Identity = 66/95 (69.47%), Postives = 75/95 (78.95%), Query Frame = 0
Query: 22 RSGNSACGGSDSNNSVHNAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDG 116
+S +S G H +QIEIIPCK+CGDKSSG+HYGVITCEGCKGFFRRSQ S Y CPRQKNC++DR +RNRCQ CRLQKCLA+GMSRD
Sbjct: 48 QSYSSTSRGISVTKKTHTSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDA 142 HSP 2 Score: 104.375 bits (259), Expect = 3.342e-22 Identity = 70/242 (28.93%), Postives = 112/242 (46.28%), Query Frame = 0
Query: 469 LTNSIFEAHTRTSLLTRSQIHEQCKQGVDQVKLYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVIRMSRYFDLSQNAVLFFDIMLPMESFMTTGDTGEMNLVNQIFDLAKAV--FQTLQRELTNRPPMVPTKGDVS-------------------------------VLTKLLNKRHTLREINFLHTEALTRFRSGNGSMIE--FPALYRELFSSD 675
L +I ++H T R ++ + Q Q ++ ++N +E +W A K+T IQ ++EFAK + GFM+ Q+DQI LLK G+ E+ IRM R FD SQN ++FD + G + ++ +F+ K++ + E+ V D S +LTKL+ K TLR + HTE L F++ ++ FP LY+ELF+S+
Sbjct: 276 LAQNISKSHLETCQYLREELQQITWQTFLQEEIENYQNKQREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFD-SQNNTVYFDGKYASPDVFKS--LGCEDFISFVFEFGKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSE 514
BLAST of EMLSAG00000000733 vs. SwissProt
Match: gi|124028630|sp|Q92753.3|RORB_HUMAN (RecName: Full=Nuclear receptor ROR-beta; AltName: Full=Nuclear receptor RZR-beta; AltName: Full=Nuclear receptor subfamily 1 group F member 2; AltName: Full=Retinoid-related orphan receptor-beta) HSP 1 Score: 152.525 bits (384), Expect = 1.318e-38 Identity = 62/77 (80.52%), Postives = 70/77 (90.91%), Query Frame = 0
Query: 40 AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDG 116
AQIE+IPCK+CGDKSSG+HYGVITCEGCKGFFRRSQ + +Y CPRQ+NC++DR NRNRCQ CRLQKCLALGMSRD
Sbjct: 14 AQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQKCLALGMSRDA 90 HSP 2 Score: 103.219 bits (256), Expect = 4.270e-22 Identity = 77/248 (31.05%), Postives = 116/248 (46.77%), Query Frame = 0
Query: 463 DRIGVLLTNSIFEAHTRTSLLTRSQIHEQCKQGVDQVKLYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVIRMSRYFDLSQNAVLFFDIMLPMESFMTTGDTGEMNLVNQIFDLAK------------AVF-------------------QTLQRELTNRPPMVPTKG--DVSVLTKLLNKRHTLREINFLHTEALTRFRSGNGSMIE--FPALYRELFSSD 675
DRI +I ++H T T ++H+ Q ++ +++ S+E LW A ++T+ IQ ++EFAK + GFM+ Q+DQI LLK G E+ ++RM R F+ N VLF M+ F G +LVN+ FD AK A+F Q LQ ++ V K D L KL+ K T+ + LH E L F+ + ++ FP LY+ELF+ D
Sbjct: 224 DRIA----QNIIKSHLETCQYTMEELHQLAWQTHTYEEIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSD---DLVNEAFDFAKNLCSLQLTEEEIALFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKLIAKIPTITAVCNLHGEKLQVFKQSHPEIVNTLFPPLYKELFNPD 464
BLAST of EMLSAG00000000733 vs. SwissProt
Match: gi|124028632|sp|P45446.3|RORB_RAT (RecName: Full=Nuclear receptor ROR-beta; AltName: Full=Nuclear receptor RZR-beta; AltName: Full=Nuclear receptor subfamily 1 group F member 2; AltName: Full=Retinoid-related orphan receptor-beta) HSP 1 Score: 152.14 bits (383), Expect = 1.384e-38 Identity = 62/77 (80.52%), Postives = 70/77 (90.91%), Query Frame = 0
Query: 40 AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDG 116
AQIE+IPCK+CGDKSSG+HYGVITCEGCKGFFRRSQ + +Y CPRQ+NC++DR NRNRCQ CRLQKCLALGMSRD
Sbjct: 14 AQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQKCLALGMSRDA 90 HSP 2 Score: 103.219 bits (256), Expect = 4.674e-22 Identity = 77/248 (31.05%), Postives = 116/248 (46.77%), Query Frame = 0
Query: 463 DRIGVLLTNSIFEAHTRTSLLTRSQIHEQCKQGVDQVKLYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVIRMSRYFDLSQNAVLFFDIMLPMESFMTTGDTGEMNLVNQIFDLAK------------AVF-------------------QTLQRELTNRPPMVPTKG--DVSVLTKLLNKRHTLREINFLHTEALTRFRSGNGSMIE--FPALYRELFSSD 675
DRI +I ++H T T ++H+ Q ++ +++ S+E LW A ++T+ IQ ++EFAK + GFM+ Q+DQI LLK G E+ ++RM R F+ N VLF M+ F G +LVN+ FD AK A+F Q LQ ++ V K D L KL+ K T+ + LH E L F+ + ++ FP LY+ELF+ D
Sbjct: 224 DRIA----QNIIKSHLETCQYTMEELHQLAWQTHTYEEIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSD---DLVNEAFDFAKNLCSLQLTEEEIALFSSAVLISPDRAWLLEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKLIAKIPTITAVCNLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPD 464
BLAST of EMLSAG00000000733 vs. SwissProt
Match: gi|124028631|sp|Q8R1B8.3|RORB_MOUSE (RecName: Full=Nuclear receptor ROR-beta; AltName: Full=Nuclear receptor RZR-beta; AltName: Full=Nuclear receptor subfamily 1 group F member 2; AltName: Full=Retinoid-related orphan receptor-beta) HSP 1 Score: 152.14 bits (383), Expect = 1.662e-38 Identity = 62/77 (80.52%), Postives = 70/77 (90.91%), Query Frame = 0
Query: 40 AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDG 116
AQIE+IPCK+CGDKSSG+HYGVITCEGCKGFFRRSQ + +Y CPRQ+NC++DR NRNRCQ CRLQKCLALGMSRD
Sbjct: 14 AQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQKCLALGMSRDA 90 HSP 2 Score: 103.605 bits (257), Expect = 3.900e-22 Identity = 77/248 (31.05%), Postives = 116/248 (46.77%), Query Frame = 0
Query: 463 DRIGVLLTNSIFEAHTRTSLLTRSQIHEQCKQGVDQVKLYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVIRMSRYFDLSQNAVLFFDIMLPMESFMTTGDTGEMNLVNQIFDLAK------------AVF-------------------QTLQRELTNRPPMVPTKG--DVSVLTKLLNKRHTLREINFLHTEALTRFRSGNGSMIE--FPALYRELFSSD 675
DRI +I ++H T T ++H+ Q ++ +++ S+E LW A ++T+ IQ ++EFAK + GFM+ Q+DQI LLK G E+ ++RM R F+ N VLF M+ F G +LVN+ FD AK A+F Q LQ ++ V K D L KL+ K T+ + LH E L F+ + ++ FP LY+ELF+ D
Sbjct: 224 DRIA----QNIIKSHLETCQYTMEELHQLAWQTHTYEEIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSD---DLVNEAFDFAKNLCSLQLTEEEIALFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKLIAKIPTITAVCNLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPD 464
BLAST of EMLSAG00000000733 vs. SwissProt
Match: gi|1710639|sp|P51450.1|RORG_MOUSE (RecName: Full=Nuclear receptor ROR-gamma; AltName: Full=Nuclear receptor RZR-gamma; AltName: Full=Nuclear receptor subfamily 1 group F member 3; AltName: Full=RAR-related orphan receptor C; AltName: Full=Retinoid-related orphan receptor-gamma; AltName: Full=Thymus orphan receptor; Short=TOR) HSP 1 Score: 144.821 bits (364), Expect = 1.042e-35 Identity = 61/84 (72.62%), Postives = 69/84 (82.14%), Query Frame = 0
Query: 33 SNNSVHNAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDG 116
+ H +QIE+IPCK+CGDKSSG+HYGVITCEGCKGFFRRSQ V Y C RQ+NC +DR +RNRCQ CRLQKCLALGMSRD
Sbjct: 17 AAKKTHTSQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQCNVAYSCTRQQNCPIDRTSRNRCQHCRLQKCLALGMSRDA 100 HSP 2 Score: 81.2629 bits (199), Expect = 7.335e-15 Identity = 64/230 (27.83%), Postives = 102/230 (44.35%), Query Frame = 0
Query: 479 RTSLLTRSQIHEQCKQGVDQVKLYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVIRMSRYFDLSQNAVLFFDIMLPMESFMTTGDTGEMNLVNQIFDLAK------------AVFQTLQRELTNRPPMVPTKGDVSVLTKL-------LNKRH------------TLREINFLHTEALTRFRSGNGSMIE--FPALYRELFSSD 675
RT+L +R ++ +++ S E+W A LT IQ ++EFAK + GFM+ Q+DQI LL GA E+ ++RM R ++ + + V F +E F G + L++ IFD + A++ L NRP + + + L L K H LR + H E L F+ + +++ FP LY+ELFS+D
Sbjct: 294 RTNLFSREEV-------------TSYQRKSMWEMWERCAHHLTEAIQYVVEFAKRLSGFMELCQNDQIILLTAGAMEVVLVRMCRAYNANNHTVFFEGKYGGVELFRALGCS---ELISSIFDFSHFLSALCFSEDEIALYTALVLINANRPGLQEKRRVEHLQYNLELAFHHHLCKTHRQGLLAKLPPKGKLRSLCSQHVEKLQIFQHLHPIVVQAAFPPLYKELFSTD 507
BLAST of EMLSAG00000000733 vs. Select Arthropod Genomes
Match: XP_006570917.1 (PREDICTED: probable nuclear hormone receptor HR3 isoform X6 [Apis mellifera]) HSP 1 Score: 212.231 bits (539), Expect = 2.406e-61 Identity = 118/251 (47.01%), Postives = 151/251 (60.16%), Query Frame = 0
Query: 464 RIGVLLTNSIFEAHTRTSLLTRSQIHEQCKQGVDQVKLYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVIRMSRYFDLSQNAVLFFDIMLPMESFMTTGDTGEMNLVNQIFDLAK---------------------------------------AVFQTLQRELTNRPPMVPTKGDVSVLTKLLNKRHTLREINFLHTEALTRFRSGNGSMIEFPALYRELFSSD 675
+I LL+ +I +AH RT LL+ QI E ++ D +L +KNM+ E+LWL AQKLT VIQQIIEFAKMVPGFMK QDDQI LLK G+FELAV+RMSRY DL QN VL+ D MLP ++F TT DT EM LV+ +F+LA+ AV + L+ EL +R + P KGDV+V +L K LREI+ LH +AL +F+ + EFPAL++ELFS D
Sbjct: 139 QISELLSKTIADAHARTCLLSTEQIQESFRKPHDLSRLIYYKNMAHEQLWLECAQKLTTVIQQIIEFAKMVPGFMKLSQDDQIVLLKAGSFELAVLRMSRYLDLQQNCVLYGDTMLPQDAFYTT-DTAEMKLVSCVFELARSIAELKLTETELALYSAAVLLSPDRPGLKGLAEITRLSQAVIRALRSEL-DRNHVSPIKGDVTVCDAILAKIPQLREISLLHMDALAKFKRSQPHL-EFPALHKELFSVD 386
BLAST of EMLSAG00000000733 vs. Select Arthropod Genomes
Match: XP_006570916.1 (PREDICTED: probable nuclear hormone receptor HR3 isoform X6 [Apis mellifera]) HSP 1 Score: 212.231 bits (539), Expect = 2.406e-61 Identity = 118/251 (47.01%), Postives = 151/251 (60.16%), Query Frame = 0
Query: 464 RIGVLLTNSIFEAHTRTSLLTRSQIHEQCKQGVDQVKLYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVIRMSRYFDLSQNAVLFFDIMLPMESFMTTGDTGEMNLVNQIFDLAK---------------------------------------AVFQTLQRELTNRPPMVPTKGDVSVLTKLLNKRHTLREINFLHTEALTRFRSGNGSMIEFPALYRELFSSD 675
+I LL+ +I +AH RT LL+ QI E ++ D +L +KNM+ E+LWL AQKLT VIQQIIEFAKMVPGFMK QDDQI LLK G+FELAV+RMSRY DL QN VL+ D MLP ++F TT DT EM LV+ +F+LA+ AV + L+ EL +R + P KGDV+V +L K LREI+ LH +AL +F+ + EFPAL++ELFS D
Sbjct: 139 QISELLSKTIADAHARTCLLSTEQIQESFRKPHDLSRLIYYKNMAHEQLWLECAQKLTTVIQQIIEFAKMVPGFMKLSQDDQIVLLKAGSFELAVLRMSRYLDLQQNCVLYGDTMLPQDAFYTT-DTAEMKLVSCVFELARSIAELKLTETELALYSAAVLLSPDRPGLKGLAEITRLSQAVIRALRSEL-DRNHVSPIKGDVTVCDAILAKIPQLREISLLHMDALAKFKRSQPHL-EFPALHKELFSVD 386
BLAST of EMLSAG00000000733 vs. Select Arthropod Genomes
Match: XP_006570915.1 (PREDICTED: probable nuclear hormone receptor HR3 isoform X6 [Apis mellifera]) HSP 1 Score: 212.231 bits (539), Expect = 2.406e-61 Identity = 118/251 (47.01%), Postives = 151/251 (60.16%), Query Frame = 0
Query: 464 RIGVLLTNSIFEAHTRTSLLTRSQIHEQCKQGVDQVKLYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVIRMSRYFDLSQNAVLFFDIMLPMESFMTTGDTGEMNLVNQIFDLAK---------------------------------------AVFQTLQRELTNRPPMVPTKGDVSVLTKLLNKRHTLREINFLHTEALTRFRSGNGSMIEFPALYRELFSSD 675
+I LL+ +I +AH RT LL+ QI E ++ D +L +KNM+ E+LWL AQKLT VIQQIIEFAKMVPGFMK QDDQI LLK G+FELAV+RMSRY DL QN VL+ D MLP ++F TT DT EM LV+ +F+LA+ AV + L+ EL +R + P KGDV+V +L K LREI+ LH +AL +F+ + EFPAL++ELFS D
Sbjct: 139 QISELLSKTIADAHARTCLLSTEQIQESFRKPHDLSRLIYYKNMAHEQLWLECAQKLTTVIQQIIEFAKMVPGFMKLSQDDQIVLLKAGSFELAVLRMSRYLDLQQNCVLYGDTMLPQDAFYTT-DTAEMKLVSCVFELARSIAELKLTETELALYSAAVLLSPDRPGLKGLAEITRLSQAVIRALRSEL-DRNHVSPIKGDVTVCDAILAKIPQLREISLLHMDALAKFKRSQPHL-EFPALHKELFSVD 386
BLAST of EMLSAG00000000733 vs. Select Arthropod Genomes
Match: XP_006570914.1 (PREDICTED: probable nuclear hormone receptor HR3 isoform X5 [Apis mellifera]) HSP 1 Score: 212.231 bits (539), Expect = 1.359e-60 Identity = 118/251 (47.01%), Postives = 151/251 (60.16%), Query Frame = 0
Query: 464 RIGVLLTNSIFEAHTRTSLLTRSQIHEQCKQGVDQVKLYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVIRMSRYFDLSQNAVLFFDIMLPMESFMTTGDTGEMNLVNQIFDLAK---------------------------------------AVFQTLQRELTNRPPMVPTKGDVSVLTKLLNKRHTLREINFLHTEALTRFRSGNGSMIEFPALYRELFSSD 675
+I LL+ +I +AH RT LL+ QI E ++ D +L +KNM+ E+LWL AQKLT VIQQIIEFAKMVPGFMK QDDQI LLK G+FELAV+RMSRY DL QN VL+ D MLP ++F TT DT EM LV+ +F+LA+ AV + L+ EL +R + P KGDV+V +L K LREI+ LH +AL +F+ + EFPAL++ELFS D
Sbjct: 217 QISELLSKTIADAHARTCLLSTEQIQESFRKPHDLSRLIYYKNMAHEQLWLECAQKLTTVIQQIIEFAKMVPGFMKLSQDDQIVLLKAGSFELAVLRMSRYLDLQQNCVLYGDTMLPQDAFYTT-DTAEMKLVSCVFELARSIAELKLTETELALYSAAVLLSPDRPGLKGLAEITRLSQAVIRALRSEL-DRNHVSPIKGDVTVCDAILAKIPQLREISLLHMDALAKFKRSQPHL-EFPALHKELFSVD 464 HSP 2 Score: 179.874 bits (455), Expect = 1.028e-48 Identity = 91/156 (58.33%), Postives = 102/156 (65.38%), Query Frame = 0
Query: 36 SVHNAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDGG--GALXPSGRS--------------SHNGNSPDSSCFDTQQQPSSTDMSYEGGGATSGFSYGSDLSPYNGGYTF 175
S AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPR KNC+VDRVNRNRCQ+CRLQKCL LGMSRD G + R + + +PDSS F+ Q PSS+D + P+NGGYT+
Sbjct: 3 STIRAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRNKNCVVDRVNRNRCQYCRLQKCLRLGMSRDAVKFGRMSKKQREKVEDEVRFHKAQMRAASETAPDSSVFE-HQTPSSSDQHH----------------PFNGGYTY 141
BLAST of EMLSAG00000000733 vs. Select Arthropod Genomes
Match: XP_016768650.1 (PREDICTED: probable nuclear hormone receptor HR3 isoform X1 [Apis mellifera]) HSP 1 Score: 213.772 bits (543), Expect = 1.371e-60 Identity = 118/251 (47.01%), Postives = 151/251 (60.16%), Query Frame = 0
Query: 464 RIGVLLTNSIFEAHTRTSLLTRSQIHEQCKQGVDQVKLYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVIRMSRYFDLSQNAVLFFDIMLPMESFMTTGDTGEMNLVNQIFDLAK---------------------------------------AVFQTLQRELTNRPPMVPTKGDVSVLTKLLNKRHTLREINFLHTEALTRFRSGNGSMIEFPALYRELFSSD 675
+I LL+ +I +AH RT LL+ QI E ++ D +L +KNM+ E+LWL AQKLT VIQQIIEFAKMVPGFMK QDDQI LLK G+FELAV+RMSRY DL QN VL+ D MLP ++F TT DT EM LV+ +F+LA+ AV + L+ EL +R + P KGDV+V +L K LREI+ LH +AL +F+ + EFPAL++ELFS D
Sbjct: 274 QISELLSKTIADAHARTCLLSTEQIQESFRKPHDLSRLIYYKNMAHEQLWLECAQKLTTVIQQIIEFAKMVPGFMKLSQDDQIVLLKAGSFELAVLRMSRYLDLQQNCVLYGDTMLPQDAFYTT-DTAEMKLVSCVFELARSIAELKLTETELALYSAAVLLSPDRPGLKGLAEITRLSQAVIRALRSEL-DRNHVSPIKGDVTVCDAILAKIPQLREISLLHMDALAKFKRSQPHL-EFPALHKELFSVD 521 HSP 2 Score: 182.57 bits (462), Expect = 3.237e-49 Identity = 92/162 (56.79%), Postives = 106/162 (65.43%), Query Frame = 0
Query: 30 GSDSNNSVHNAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDGG--GALXPSGRS--------------SHNGNSPDSSCFDTQQQPSSTDMSYEGGGATSGFSYGSDLSPYNGGYTF 175
G++ S +AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPR KNC+VDRVNRNRCQ+CRLQKCL LGMSRD G + R + + +PDSS F+ Q PSS+D + P+NGGYT+
Sbjct: 54 GTNRKRSRSSAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRNKNCVVDRVNRNRCQYCRLQKCLRLGMSRDAVKFGRMSKKQREKVEDEVRFHKAQMRAASETAPDSSVFE-HQTPSSSDQHH----------------PFNGGYTY 198
BLAST of EMLSAG00000000733 vs. Select Arthropod Genomes
Match: XP_006570913.1 (PREDICTED: probable nuclear hormone receptor HR3 isoform X4 [Apis mellifera]) HSP 1 Score: 213.386 bits (542), Expect = 1.477e-60 Identity = 118/251 (47.01%), Postives = 151/251 (60.16%), Query Frame = 0
Query: 464 RIGVLLTNSIFEAHTRTSLLTRSQIHEQCKQGVDQVKLYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVIRMSRYFDLSQNAVLFFDIMLPMESFMTTGDTGEMNLVNQIFDLAK---------------------------------------AVFQTLQRELTNRPPMVPTKGDVSVLTKLLNKRHTLREINFLHTEALTRFRSGNGSMIEFPALYRELFSSD 675
+I LL+ +I +AH RT LL+ QI E ++ D +L +KNM+ E+LWL AQKLT VIQQIIEFAKMVPGFMK QDDQI LLK G+FELAV+RMSRY DL QN VL+ D MLP ++F TT DT EM LV+ +F+LA+ AV + L+ EL +R + P KGDV+V +L K LREI+ LH +AL +F+ + EFPAL++ELFS D
Sbjct: 252 QISELLSKTIADAHARTCLLSTEQIQESFRKPHDLSRLIYYKNMAHEQLWLECAQKLTTVIQQIIEFAKMVPGFMKLSQDDQIVLLKAGSFELAVLRMSRYLDLQQNCVLYGDTMLPQDAFYTT-DTAEMKLVSCVFELARSIAELKLTETELALYSAAVLLSPDRPGLKGLAEITRLSQAVIRALRSEL-DRNHVSPIKGDVTVCDAILAKIPQLREISLLHMDALAKFKRSQPHL-EFPALHKELFSVD 499 HSP 2 Score: 180.259 bits (456), Expect = 1.536e-48 Identity = 90/153 (58.82%), Postives = 101/153 (66.01%), Query Frame = 0
Query: 39 NAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDGG--GALXPSGRS--------------SHNGNSPDSSCFDTQQQPSSTDMSYEGGGATSGFSYGSDLSPYNGGYTF 175
AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPR KNC+VDRVNRNRCQ+CRLQKCL LGMSRD G + R + + +PDSS F+ Q PSS+D + P+NGGYT+
Sbjct: 41 KAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRNKNCVVDRVNRNRCQYCRLQKCLRLGMSRDAVKFGRMSKKQREKVEDEVRFHKAQMRAASETAPDSSVFE-HQTPSSSDQHH----------------PFNGGYTY 176
BLAST of EMLSAG00000000733 vs. Select Arthropod Genomes
Match: XP_006570908.1 (PREDICTED: probable nuclear hormone receptor HR3 isoform X3 [Apis mellifera]) HSP 1 Score: 213.386 bits (542), Expect = 1.558e-60 Identity = 118/251 (47.01%), Postives = 151/251 (60.16%), Query Frame = 0
Query: 464 RIGVLLTNSIFEAHTRTSLLTRSQIHEQCKQGVDQVKLYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVIRMSRYFDLSQNAVLFFDIMLPMESFMTTGDTGEMNLVNQIFDLAK---------------------------------------AVFQTLQRELTNRPPMVPTKGDVSVLTKLLNKRHTLREINFLHTEALTRFRSGNGSMIEFPALYRELFSSD 675
+I LL+ +I +AH RT LL+ QI E ++ D +L +KNM+ E+LWL AQKLT VIQQIIEFAKMVPGFMK QDDQI LLK G+FELAV+RMSRY DL QN VL+ D MLP ++F TT DT EM LV+ +F+LA+ AV + L+ EL +R + P KGDV+V +L K LREI+ LH +AL +F+ + EFPAL++ELFS D
Sbjct: 264 QISELLSKTIADAHARTCLLSTEQIQESFRKPHDLSRLIYYKNMAHEQLWLECAQKLTTVIQQIIEFAKMVPGFMKLSQDDQIVLLKAGSFELAVLRMSRYLDLQQNCVLYGDTMLPQDAFYTT-DTAEMKLVSCVFELARSIAELKLTETELALYSAAVLLSPDRPGLKGLAEITRLSQAVIRALRSEL-DRNHVSPIKGDVTVCDAILAKIPQLREISLLHMDALAKFKRSQPHL-EFPALHKELFSVD 511 HSP 2 Score: 179.874 bits (455), Expect = 2.694e-48 Identity = 90/153 (58.82%), Postives = 101/153 (66.01%), Query Frame = 0
Query: 39 NAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDGG--GALXPSGRS--------------SHNGNSPDSSCFDTQQQPSSTDMSYEGGGATSGFSYGSDLSPYNGGYTF 175
AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPR KNC+VDRVNRNRCQ+CRLQKCL LGMSRD G + R + + +PDSS F+ Q PSS+D + P+NGGYT+
Sbjct: 53 TAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRNKNCVVDRVNRNRCQYCRLQKCLRLGMSRDAVKFGRMSKKQREKVEDEVRFHKAQMRAASETAPDSSVFE-HQTPSSSDQHH----------------PFNGGYTY 188
BLAST of EMLSAG00000000733 vs. Select Arthropod Genomes
Match: gb|EFA07440.2| (hormone receptor in 46-like protein [Tribolium castaneum]) HSP 1 Score: 212.616 bits (540), Expect = 2.130e-60 Identity = 118/251 (47.01%), Postives = 152/251 (60.56%), Query Frame = 0
Query: 464 RIGVLLTNSIFEAHTRTSLLTRSQIHEQCKQGVDQVKLYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVIRMSRYFDLSQNAVLFFDIMLPMESFMTTGDTGEMNLVNQIFDLAK---------------------------------------AVFQTLQRELTNRPPMVPTKGDVSVLTKLLNKRHTLREINFLHTEALTRFRSGNGSMIEFPALYRELFSSD 675
+I LL+ +I +AHTRT L + IHE ++ D +L +KNM+ EELWL AQKLT +IQQIIEFAKMVPGFMK QDDQI LLK G+FELA+IRMSRY DLSQN VL+ D MLP ++F T+ DT EM LV +F+++K AV + L+ EL +R +P KGDV+V LL K TLREI+ LH +AL + + + +EFPAL++ELFS D
Sbjct: 251 QISELLSKTISDAHTRTCLYSLEHIHEMFRKPHDLSRLLYYKNMAHEELWLECAQKLTTIIQQIIEFAKMVPGFMKLSQDDQIVLLKAGSFELAIIRMSRYLDLSQNCVLYGDTMLPQDAFFTS-DTAEMKLVTCVFEVSKSIAELKLTETELALYSACVLLSPDRPGLKGIGEISRLSQAVVRALRLEL-DRNHSMPIKGDVTVCDALLTKIPTLREISMLHMDALGKLKR-SAPHLEFPALHKELFSVD 498 HSP 2 Score: 189.889 bits (481), Expect = 5.465e-52 Identity = 100/164 (60.98%), Postives = 114/164 (69.51%), Query Frame = 0
Query: 33 SNNSVHNAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDGG--GALXPSGRS--------------SHNGNSPDSSCFDTQQQPSSTDM---SYEGGGATSGFSYGSDLSPYNGGYTFTN 177
S NS+ AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPR KNC+VDRVNRNRCQ+CRLQKCL LGMSRD G + R + + ++PDSS F+ QQ PSS+D SY G G++Y SD+S Y Y +TN
Sbjct: 46 SANSIR-AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRNKNCVVDRVNRNRCQYCRLQKCLRLGMSRDAVKFGRMSKKQREKVEDEVRFHRAQLRAQSDSAPDSSVFE-QQTPSSSDQLHHSYNG-----GYTYNSDVSAYTPAY-YTN 201
BLAST of EMLSAG00000000733 vs. Select Arthropod Genomes
Match: XP_016768658.1 (PREDICTED: probable nuclear hormone receptor HR3 isoform X2 [Apis mellifera]) HSP 1 Score: 212.616 bits (540), Expect = 3.786e-60 Identity = 118/251 (47.01%), Postives = 151/251 (60.16%), Query Frame = 0
Query: 464 RIGVLLTNSIFEAHTRTSLLTRSQIHEQCKQGVDQVKLYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVIRMSRYFDLSQNAVLFFDIMLPMESFMTTGDTGEMNLVNQIFDLAK---------------------------------------AVFQTLQRELTNRPPMVPTKGDVSVLTKLLNKRHTLREINFLHTEALTRFRSGNGSMIEFPALYRELFSSD 675
+I LL+ +I +AH RT LL+ QI E ++ D +L +KNM+ E+LWL AQKLT VIQQIIEFAKMVPGFMK QDDQI LLK G+FELAV+RMSRY DL QN VL+ D MLP ++F TT DT EM LV+ +F+LA+ AV + L+ EL +R + P KGDV+V +L K LREI+ LH +AL +F+ + EFPAL++ELFS D
Sbjct: 264 QISELLSKTIADAHARTCLLSTEQIQESFRKPHDLSRLIYYKNMAHEQLWLECAQKLTTVIQQIIEFAKMVPGFMKLSQDDQIVLLKAGSFELAVLRMSRYLDLQQNCVLYGDTMLPQDAFYTT-DTAEMKLVSCVFELARSIAELKLTETELALYSAAVLLSPDRPGLKGLAEITRLSQAVIRALRSEL-DRNHVSPIKGDVTVCDAILAKIPQLREISLLHMDALAKFKRSQPHL-EFPALHKELFSVD 511 HSP 2 Score: 179.874 bits (455), Expect = 2.860e-48 Identity = 92/157 (58.60%), Postives = 104/157 (66.24%), Query Frame = 0
Query: 35 NSVHNAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDGG--GALXPSGRS--------------SHNGNSPDSSCFDTQQQPSSTDMSYEGGGATSGFSYGSDLSPYNGGYTF 175
NS+ AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPR KNC+VDRVNRNRCQ+CRLQKCL LGMSRD G + R + + +PDSS F+ Q PSS+D + P+NGGYT+
Sbjct: 50 NSIR-AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRNKNCVVDRVNRNRCQYCRLQKCLRLGMSRDAVKFGRMSKKQREKVEDEVRFHKAQMRAASETAPDSSVFE-HQTPSSSDQHH----------------PFNGGYTY 188
BLAST of EMLSAG00000000733 vs. Select Arthropod Genomes
Match: XP_006570911.1 (PREDICTED: probable nuclear hormone receptor HR3 isoform X2 [Apis mellifera]) HSP 1 Score: 212.616 bits (540), Expect = 3.786e-60 Identity = 118/251 (47.01%), Postives = 151/251 (60.16%), Query Frame = 0
Query: 464 RIGVLLTNSIFEAHTRTSLLTRSQIHEQCKQGVDQVKLYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVIRMSRYFDLSQNAVLFFDIMLPMESFMTTGDTGEMNLVNQIFDLAK---------------------------------------AVFQTLQRELTNRPPMVPTKGDVSVLTKLLNKRHTLREINFLHTEALTRFRSGNGSMIEFPALYRELFSSD 675
+I LL+ +I +AH RT LL+ QI E ++ D +L +KNM+ E+LWL AQKLT VIQQIIEFAKMVPGFMK QDDQI LLK G+FELAV+RMSRY DL QN VL+ D MLP ++F TT DT EM LV+ +F+LA+ AV + L+ EL +R + P KGDV+V +L K LREI+ LH +AL +F+ + EFPAL++ELFS D
Sbjct: 264 QISELLSKTIADAHARTCLLSTEQIQESFRKPHDLSRLIYYKNMAHEQLWLECAQKLTTVIQQIIEFAKMVPGFMKLSQDDQIVLLKAGSFELAVLRMSRYLDLQQNCVLYGDTMLPQDAFYTT-DTAEMKLVSCVFELARSIAELKLTETELALYSAAVLLSPDRPGLKGLAEITRLSQAVIRALRSEL-DRNHVSPIKGDVTVCDAILAKIPQLREISLLHMDALAKFKRSQPHL-EFPALHKELFSVD 511 HSP 2 Score: 179.874 bits (455), Expect = 2.860e-48 Identity = 92/157 (58.60%), Postives = 104/157 (66.24%), Query Frame = 0
Query: 35 NSVHNAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDGG--GALXPSGRS--------------SHNGNSPDSSCFDTQQQPSSTDMSYEGGGATSGFSYGSDLSPYNGGYTF 175
NS+ AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPR KNC+VDRVNRNRCQ+CRLQKCL LGMSRD G + R + + +PDSS F+ Q PSS+D + P+NGGYT+
Sbjct: 50 NSIR-AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRNKNCVVDRVNRNRCQYCRLQKCLRLGMSRDAVKFGRMSKKQREKVEDEVRFHKAQMRAASETAPDSSVFE-HQTPSSSDQHH----------------PFNGGYTY 188
BLAST of EMLSAG00000000733 vs. nr
Match: gi|657600336|gb|AID52829.1| (hormone receptor 3 [Tigriopus japonicus]) HSP 1 Score: 308.145 bits (788), Expect = 1.546e-91 Identity = 151/262 (57.63%), Postives = 183/262 (69.85%), Query Frame = 0
Query: 452 ELYLLQEELQND--RIGVLLTNSIFEAHTRTSLLTRSQIHEQCKQGVDQVKLYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVIRMSRYFDLSQNAVLFFDIMLPMESFMTTGDTGEMNLVNQIFDLAK---------------------------------------AVFQTLQRELTNRPPMVPTKGDVSVLTKLLNKRHTLREINFLHTEALTRFRSGNGSMIEFPALYRELF 672
E++LLQEELQ+D RI VLL+NSIFEAHTRTSL ++ I E+ K GVDQ K++ FK+++QEELWL AQ LT +I QIIEFAKM+PGFMKFPQ+DQI LLKGG FELA+IRMSRY+D+SQ AVLF D MLPME+F T DT EM L N+IFD A+ AV LQRELT+RPPMV KGDVSV+ KL+ KRH+LREIN++H EAL +FR+ G ++EFPAL+RELF
Sbjct: 421 EIFLLQEELQHDPDRISVLLSNSIFEAHTRTSLFSKDVIQERWKVGVDQSKVFAFKSLTQEELWLQCAQGLTTIITQIIEFAKMLPGFMKFPQEDQIVLLKGGLFELAIIRMSRYYDISQFAVLFSDTMLPMEAFTTNRDTQEMRLANRIFDFAQDLAEMQLSEVALSLYSAYILLQDDRPGLRNTEEISRLNNAVLTALQRELTHRPPMVAVKGDVSVINKLMTKRHSLREINYMHLEALNKFRNNAGVLVEFPALHRELF 682 HSP 2 Score: 194.897 bits (494), Expect = 1.009e-49 Identity = 113/225 (50.22%), Postives = 128/225 (56.89%), Query Frame = 0
Query: 40 AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDGG--GALXPSGRS------------------------------SHNGNSPD--SSCFDTQQQPSSTDMSYEGGGATSGFSYGSDLSPYNGGYTFTNI--------PPPPHPPPPPPQQQHP-------QPGSEWTDYGNVXSTTSPFXS 215
AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNC+VDRVNRNRCQ+CRLQKCL LGMSRD G + R +++G+SPD +S FD QPSSTD F Y +D +P N TF+++ P P P H S+WTDYGNV STTSPF +
Sbjct: 31 AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCVVDRVNRNRCQYCRLQKCLTLGMSRDAVKFGRMSKKQREKVEDEVRYHKNMNSQQAAAAASGGAISRSHTNSGSSPDTTASVFDP-PQPSSTDHM---------FPYNTDYNPANSYSTFSSLSTGSVPVSAPSGATPGTPVSAGHTPTSVSGNGASSDWTDYGNVDSTTSPFET 245
BLAST of EMLSAG00000000733 vs. nr
Match: gi|657600338|gb|AID52830.1| (hormone receptor 3 [Tigriopus japonicus]) HSP 1 Score: 308.916 bits (790), Expect = 5.778e-90 Identity = 151/262 (57.63%), Postives = 183/262 (69.85%), Query Frame = 0
Query: 452 ELYLLQEELQND--RIGVLLTNSIFEAHTRTSLLTRSQIHEQCKQGVDQVKLYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVIRMSRYFDLSQNAVLFFDIMLPMESFMTTGDTGEMNLVNQIFDLAK---------------------------------------AVFQTLQRELTNRPPMVPTKGDVSVLTKLLNKRHTLREINFLHTEALTRFRSGNGSMIEFPALYRELF 672
E++LLQEELQ+D RI VLL+NSIFEAHTRTSL ++ I E+ K GVDQ K++ FK+++QEELWL AQ LT +I QIIEFAKM+PGFMKFPQ+DQI LLKGG FELA+IRMSRY+D+SQ AVLF D MLPME+F T DT EM L N+IFD A+ AV LQRELT+RPPMV KGDVSV+ KL+ KRH+LREIN++H EAL +FR+ G ++EFPAL+RELF
Sbjct: 616 EIFLLQEELQHDPDRISVLLSNSIFEAHTRTSLFSKDVIQERWKVGVDQSKVFAFKSLTQEELWLQCAQGLTTIITQIIEFAKMLPGFMKFPQEDQIVLLKGGLFELAIIRMSRYYDISQFAVLFSDTMLPMEAFTTNRDTQEMRLANRIFDFAQDLAEMQLSEVALSLYSAYILLQDDRPGLRNTEEISRLNNAVLTALQRELTHRPPMVAVKGDVSVINKLMTKRHSLREINYMHLEALNKFRNNAGVLVEFPALHRELF 877 HSP 2 Score: 194.512 bits (493), Expect = 8.739e-49 Identity = 113/225 (50.22%), Postives = 128/225 (56.89%), Query Frame = 0
Query: 40 AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDGG--GALXPSGRS------------------------------SHNGNSPD--SSCFDTQQQPSSTDMSYEGGGATSGFSYGSDLSPYNGGYTFTNI--------PPPPHPPPPPPQQQHP-------QPGSEWTDYGNVXSTTSPFXS 215
AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNC+VDRVNRNRCQ+CRLQKCL LGMSRD G + R +++G+SPD +S FD QPSSTD F Y +D +P N TF+++ P P P H S+WTDYGNV STTSPF +
Sbjct: 226 AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCVVDRVNRNRCQYCRLQKCLTLGMSRDAVKFGRMSKKQREKVEDEVRYHKNMNSQQAAAAASGGAISRSHTNSGSSPDTTASVFD-PPQPSSTDHM---------FPYNTDYNPANSYSTFSSLSTGSVPVSAPSGATPGTPVSAGHTPTSVSGNGASSDWTDYGNVDSTTSPFET 440
BLAST of EMLSAG00000000733 vs. nr
Match: gi|646722597|gb|KDR23541.1| (putative nuclear hormone receptor HR3, partial [Zootermopsis nevadensis]) HSP 1 Score: 220.32 bits (560), Expect = 6.074e-61 Identity = 123/251 (49.00%), Postives = 150/251 (59.76%), Query Frame = 0
Query: 464 RIGVLLTNSIFEAHTRTSLLTRSQIHEQCKQGVDQVKLYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVIRMSRYFDLSQNAVLFFDIMLPMESFMTTGDTGEMNLVNQIFDLAK---------------------------------------AVFQTLQRELTNRPPMVPTKGDVSVLTKLLNKRHTLREINFLHTEALTRFRSGNGSMIEFPALYRELFSSD 675
+I LL+ +I +AH RT L T IHE ++ D KL +KNM+ EELWL AQKLT VIQQIIEFAKMVPGFMK QDDQI LLK G+FELAV+RMSRYFDLSQN VL+ D MLP ++F TT +T EM LV +F+ AK AV + L+ EL R VP KGDV+V LL K TLRE++ LH +AL +F+ + EFPAL++ELFS D
Sbjct: 205 QISELLSKTIADAHARTCLFTTEHIHEMFRKPQDLSKLIYYKNMAHEELWLECAQKLTTVIQQIIEFAKMVPGFMKLSQDDQIVLLKAGSFELAVLRMSRYFDLSQNCVLYADTMLPQDAFFTT-ETAEMKLVTCVFEFAKGVSELKLTETELALYSACVLLSADRPGLKGLAEIGRLSQAVLRALRLEL-ERNHSVPIKGDVTVYDALLAKVPTLRELSMLHMDALAKFKRSTPHL-EFPALHKELFSVD 452 HSP 2 Score: 186.422 bits (472), Expect = 1.508e-48 Identity = 100/183 (54.64%), Postives = 114/183 (62.30%), Query Frame = 0
Query: 42 IEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDGG--GALXPSGRS--------------SHNGNSPDSSCFDTQQQPSSTDM---SYEGGGATSGFSYGSDL---SPYNGGYTFTNIPPPPHPPPPPPQQQHPQPGSEWTD 202
IEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPR KNC+VDRVNRNRCQ+CRLQKCL LGMSRD G + R + +PDSS FDT Q PSS+D +Y G G++Y SDL +P GYT+ P P QQ +++ D
Sbjct: 1 IEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRNKNCVVDRVNRNRCQYCRLQKCLRLGMSRDAVKFGRMSKKQREKVEDEVRFHRAQLRAQTETAPDSSVFDT-QTPSSSDQLQPNYNG-----GYTYNSDLGSYTPATHGYTYATT-----PVQTPHQQMAYDISADYVD 172
BLAST of EMLSAG00000000733 vs. nr
Match: gi|114049539|emb|CAJ90623.1| (HR3 isoform B2 [Blattella germanica]) HSP 1 Score: 220.705 bits (561), Expect = 4.749e-60 Identity = 122/251 (48.61%), Postives = 150/251 (59.76%), Query Frame = 0
Query: 464 RIGVLLTNSIFEAHTRTSLLTRSQIHEQCKQGVDQVKLYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVIRMSRYFDLSQNAVLFFDIMLPMESFMTTGDTGEMNLVNQIFDLAK---------------------------------------AVFQTLQRELTNRPPMVPTKGDVSVLTKLLNKRHTLREINFLHTEALTRFRSGNGSMIEFPALYRELFSSD 675
+I LL+ +I +AH RT L T IHE ++ D KL +KNM+ EELWL AQKLT VIQQIIEFAKMVPGFMK QDDQI LLK G+FELAV+RMSRYFDLSQN VL+ D MLP ++F TT +T EM LV +F+ AK AV + L+ EL R +P KGDV+V LL K TLRE++ LH +AL +F+ + EFPAL++ELFS D
Sbjct: 318 QISELLSKTIADAHARTCLFTTEHIHEMFRKPQDLSKLLYYKNMAHEELWLECAQKLTTVIQQIIEFAKMVPGFMKLSQDDQIVLLKAGSFELAVLRMSRYFDLSQNCVLYADTMLPQDAFYTT-ETAEMKLVTCVFEFAKGVAELKLTETELALYSACVLLSADRPGLKGLAEIGRLSQAVLRALRIEL-ERNHAIPIKGDVTVYDALLAKVPTLRELSMLHMDALAKFKRSTPHL-EFPALHKELFSVD 565 HSP 2 Score: 189.504 bits (480), Expect = 1.037e-48 Identity = 100/166 (60.24%), Postives = 111/166 (66.87%), Query Frame = 0
Query: 33 SNNSVHNAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDGG--GALXPSGRS--------------SHNGNSPDSSCFDTQQQPSSTDM---SYEGGGATSGFSYGSDLSPYN----GGYTF 175
S NS+ AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPR KNC+VDRVNRNRCQ+CRLQKCL LGMSRD G + R + +PDSS FDT Q PSS+D +Y G G++Y SDL Y GGY +
Sbjct: 69 SANSI-RAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRNKNCVVDRVNRNRCQYCRLQKCLRLGMSRDAVKFGRMSKKQREKVEDEVRFHRAQLRAQTETAPDSSVFDT-QTPSSSDQLQPNYNG-----GYTYNSDLGSYTPATHGGYAY 227
BLAST of EMLSAG00000000733 vs. nr
Match: gi|114049535|emb|CAJ90621.1| (HR3 isoform A [Blattella germanica]) HSP 1 Score: 221.476 bits (563), Expect = 6.110e-60 Identity = 122/251 (48.61%), Postives = 150/251 (59.76%), Query Frame = 0
Query: 464 RIGVLLTNSIFEAHTRTSLLTRSQIHEQCKQGVDQVKLYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVIRMSRYFDLSQNAVLFFDIMLPMESFMTTGDTGEMNLVNQIFDLAK---------------------------------------AVFQTLQRELTNRPPMVPTKGDVSVLTKLLNKRHTLREINFLHTEALTRFRSGNGSMIEFPALYRELFSSD 675
+I LL+ +I +AH RT L T IHE ++ D KL +KNM+ EELWL AQKLT VIQQIIEFAKMVPGFMK QDDQI LLK G+FELAV+RMSRYFDLSQN VL+ D MLP ++F TT +T EM LV +F+ AK AV + L+ EL R +P KGDV+V LL K TLRE++ LH +AL +F+ + EFPAL++ELFS D
Sbjct: 359 QISELLSKTIADAHARTCLFTTEHIHEMFRKPQDLSKLLYYKNMAHEELWLECAQKLTTVIQQIIEFAKMVPGFMKLSQDDQIVLLKAGSFELAVLRMSRYFDLSQNCVLYADTMLPQDAFYTT-ETAEMKLVTCVFEFAKGVAELKLTETELALYSACVLLSADRPGLKGLAEIGRLSQAVLRALRIEL-ERNHAIPIKGDVTVYDALLAKVPTLRELSMLHMDALAKFKRSTPHL-EFPALHKELFSVD 606 HSP 2 Score: 189.504 bits (480), Expect = 1.995e-48 Identity = 97/160 (60.62%), Postives = 107/160 (66.88%), Query Frame = 0
Query: 39 NAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDGG--GALXPSGRS--------------SHNGNSPDSSCFDTQQQPSSTDM---SYEGGGATSGFSYGSDLSPYN----GGYTF 175
AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPR KNC+VDRVNRNRCQ+CRLQKCL LGMSRD G + R + +PDSS FDT Q PSS+D +Y G G++Y SDL Y GGY +
Sbjct: 30 KAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRNKNCVVDRVNRNRCQYCRLQKCLRLGMSRDAVKFGRMSKKQREKVEDEVRFHRAQLRAQTETAPDSSVFDT-QTPSSSDQLQPNYNG-----GYTYNSDLGSYTPATHGGYAY 183
BLAST of EMLSAG00000000733 vs. nr
Match: gi|114049537|emb|CAJ90622.1| (HR3 isoform B1 [Blattella germanica]) HSP 1 Score: 221.476 bits (563), Expect = 1.312e-59 Identity = 122/251 (48.61%), Postives = 150/251 (59.76%), Query Frame = 0
Query: 464 RIGVLLTNSIFEAHTRTSLLTRSQIHEQCKQGVDQVKLYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVIRMSRYFDLSQNAVLFFDIMLPMESFMTTGDTGEMNLVNQIFDLAK---------------------------------------AVFQTLQRELTNRPPMVPTKGDVSVLTKLLNKRHTLREINFLHTEALTRFRSGNGSMIEFPALYRELFSSD 675
+I LL+ +I +AH RT L T IHE ++ D KL +KNM+ EELWL AQKLT VIQQIIEFAKMVPGFMK QDDQI LLK G+FELAV+RMSRYFDLSQN VL+ D MLP ++F TT +T EM LV +F+ AK AV + L+ EL R +P KGDV+V LL K TLRE++ LH +AL +F+ + EFPAL++ELFS D
Sbjct: 403 QISELLSKTIADAHARTCLFTTEHIHEMFRKPQDLSKLLYYKNMAHEELWLECAQKLTTVIQQIIEFAKMVPGFMKLSQDDQIVLLKAGSFELAVLRMSRYFDLSQNCVLYADTMLPQDAFYTT-ETAEMKLVTCVFEFAKGVAELKLTETELALYSACVLLSADRPGLKGLAEIGRLSQAVLRALRIEL-ERNHAIPIKGDVTVYDALLAKVPTLRELSMLHMDALAKFKRSTPHL-EFPALHKELFSVD 650 HSP 2 Score: 189.889 bits (481), Expect = 3.130e-48 Identity = 100/166 (60.24%), Postives = 111/166 (66.87%), Query Frame = 0
Query: 33 SNNSVHNAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDGG--GALXPSGRS--------------SHNGNSPDSSCFDTQQQPSSTDM---SYEGGGATSGFSYGSDLSPYN----GGYTF 175
S NS+ AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPR KNC+VDRVNRNRCQ+CRLQKCL LGMSRD G + R + +PDSS FDT Q PSS+D +Y G G++Y SDL Y GGY +
Sbjct: 69 SANSIR-AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRNKNCVVDRVNRNRCQYCRLQKCLRLGMSRDAVKFGRMSKKQREKVEDEVRFHRAQLRAQTETAPDSSVFDT-QTPSSSDQLQPNYNG-----GYTYNSDLGSYTPATHGGYAY 227
BLAST of EMLSAG00000000733 vs. nr
Match: gi|307183686|gb|EFN70389.1| (Probable nuclear hormone receptor HR3 [Camponotus floridanus]) HSP 1 Score: 215.312 bits (547), Expect = 1.850e-59 Identity = 119/251 (47.41%), Postives = 151/251 (60.16%), Query Frame = 0
Query: 464 RIGVLLTNSIFEAHTRTSLLTRSQIHEQCKQGVDQVKLYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVIRMSRYFDLSQNAVLFFDIMLPMESFMTTGDTGEMNLVNQIFDLAK---------------------------------------AVFQTLQRELTNRPPMVPTKGDVSVLTKLLNKRHTLREINFLHTEALTRFRSGNGSMIEFPALYRELFSSD 675
+I LL+ +I +AH RT L++ QI E ++ D KL +K+M E+LWL AQKLT VIQQIIEFAKMVPGFMK QDDQI LLK G+FELAV+RMSRY DL QN VL+ DI+LP E+F TT DT EM LV+ +F+LA+ AV + L+ EL +R M P KGDV+V +L K LREI+ LH +AL +F+ + EFPAL++ELFS D
Sbjct: 168 QISELLSKTIADAHARTCLVSTDQIQESFRKPADYNKLIYYKDMGHEQLWLECAQKLTTVIQQIIEFAKMVPGFMKLSQDDQIVLLKAGSFELAVLRMSRYLDLQQNCVLYGDILLPQEAFYTT-DTAEMKLVSYVFELARSIAELKLTETELALYSAAVLLSPDRPGLKCLGDINRLSQAVIRALRSEL-DRNHMTPIKGDVTVCDAILAKIPQLREISLLHMDALAKFKRSQPHL-EFPALHKELFSVD 415
BLAST of EMLSAG00000000733 vs. nr
Match: gi|1000733371|ref|XP_015589116.1| (PREDICTED: probable nuclear hormone receptor HR3 isoform X6 [Cephus cinctus] >gi|1000733373|ref|XP_015589118.1| PREDICTED: probable nuclear hormone receptor HR3 isoform X6 [Cephus cinctus] >gi|1000733375|ref|XP_015589119.1| PREDICTED: probable nuclear hormone receptor HR3 isoform X6 [Cephus cinctus]) HSP 1 Score: 213.386 bits (542), Expect = 4.269e-59 Identity = 118/251 (47.01%), Postives = 151/251 (60.16%), Query Frame = 0
Query: 464 RIGVLLTNSIFEAHTRTSLLTRSQIHEQCKQGVDQVKLYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVIRMSRYFDLSQNAVLFFDIMLPMESFMTTGDTGEMNLVNQIFDLAK---------------------------------------AVFQTLQRELTNRPPMVPTKGDVSVLTKLLNKRHTLREINFLHTEALTRFRSGNGSMIEFPALYRELFSSD 675
+I LL+ +I +AH RT LL+ QI E ++ D +L +KNM+ E+LWL AQKLT VIQQIIEFAKMVPGFMK QDDQI LLK G+FELAV+RMSRY DL QN VL+ D MLP ++F TT DT EM LV+ +F+LA+ AV + L+ EL +R + P KGDV+V +L K LREI+ LH +AL +F+ + EFPAL++ELFS D
Sbjct: 137 QISELLSKTIADAHARTCLLSTDQIQESFRKPHDLSRLIYYKNMAHEQLWLECAQKLTTVIQQIIEFAKMVPGFMKLSQDDQIVLLKAGSFELAVLRMSRYLDLQQNCVLYGDTMLPQDAFYTT-DTAEMKLVSCVFELARSVAELKLTETELALYSAAVLLSPDRPGLKGLAEITRLSQAVIRALRSEL-DRNHVSPIKGDVTVCDAMLAKIPQLREISLLHMDALAKFKRSQPHL-EFPALHKELFSVD 384
BLAST of EMLSAG00000000733 vs. nr
Match: gi|571506897|ref|XP_006570915.1| (PREDICTED: probable nuclear hormone receptor HR3 isoform X6 [Apis mellifera] >gi|571506901|ref|XP_006570916.1| PREDICTED: probable nuclear hormone receptor HR3 isoform X6 [Apis mellifera] >gi|571506904|ref|XP_006570917.1| PREDICTED: probable nuclear hormone receptor HR3 isoform X6 [Apis mellifera]) HSP 1 Score: 212.231 bits (539), Expect = 1.177e-58 Identity = 118/251 (47.01%), Postives = 151/251 (60.16%), Query Frame = 0
Query: 464 RIGVLLTNSIFEAHTRTSLLTRSQIHEQCKQGVDQVKLYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVIRMSRYFDLSQNAVLFFDIMLPMESFMTTGDTGEMNLVNQIFDLAK---------------------------------------AVFQTLQRELTNRPPMVPTKGDVSVLTKLLNKRHTLREINFLHTEALTRFRSGNGSMIEFPALYRELFSSD 675
+I LL+ +I +AH RT LL+ QI E ++ D +L +KNM+ E+LWL AQKLT VIQQIIEFAKMVPGFMK QDDQI LLK G+FELAV+RMSRY DL QN VL+ D MLP ++F TT DT EM LV+ +F+LA+ AV + L+ EL +R + P KGDV+V +L K LREI+ LH +AL +F+ + EFPAL++ELFS D
Sbjct: 139 QISELLSKTIADAHARTCLLSTEQIQESFRKPHDLSRLIYYKNMAHEQLWLECAQKLTTVIQQIIEFAKMVPGFMKLSQDDQIVLLKAGSFELAVLRMSRYLDLQQNCVLYGDTMLPQDAFYTT-DTAEMKLVSCVFELARSIAELKLTETELALYSAAVLLSPDRPGLKGLAEITRLSQAVIRALRSEL-DRNHVSPIKGDVTVCDAILAKIPQLREISLLHMDALAKFKRSQPHL-EFPALHKELFSVD 386
BLAST of EMLSAG00000000733 vs. nr
Match: gi|572310774|ref|XP_006621136.1| (PREDICTED: probable nuclear hormone receptor HR3-like isoform X6 [Apis dorsata] >gi|1035589916|ref|XP_016921400.1| PREDICTED: probable nuclear hormone receptor HR3 isoform X5 [Apis cerana] >gi|1035589918|ref|XP_016921401.1| PREDICTED: probable nuclear hormone receptor HR3 isoform X5 [Apis cerana]) HSP 1 Score: 212.231 bits (539), Expect = 1.202e-58 Identity = 118/251 (47.01%), Postives = 151/251 (60.16%), Query Frame = 0
Query: 464 RIGVLLTNSIFEAHTRTSLLTRSQIHEQCKQGVDQVKLYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLKGGAFELAVIRMSRYFDLSQNAVLFFDIMLPMESFMTTGDTGEMNLVNQIFDLAK---------------------------------------AVFQTLQRELTNRPPMVPTKGDVSVLTKLLNKRHTLREINFLHTEALTRFRSGNGSMIEFPALYRELFSSD 675
+I LL+ +I +AH RT LL+ QI E ++ D +L +KNM+ E+LWL AQKLT VIQQIIEFAKMVPGFMK QDDQI LLK G+FELAV+RMSRY DL QN VL+ D MLP ++F TT DT EM LV+ +F+LA+ AV + L+ EL +R + P KGDV+V +L K LREI+ LH +AL +F+ + EFPAL++ELFS D
Sbjct: 139 QISELLSKTIADAHARTCLLSTEQIQESFRKPHDLSRLIYYKNMAHEQLWLECAQKLTTVIQQIIEFAKMVPGFMKLSQDDQIVLLKAGSFELAVLRMSRYLDLQQNCVLYGDTMLPQDAFYTT-DTAEMKLVSCVFELARSIAELKLTETELALYSAAVLLSPDRPGLKGLAEITRLSQAVIRALRSEL-DRNHVSPIKGDVTVCDAILAKIPQLREISLLHMDALAKFKRSQPHL-EFPALHKELFSVD 386
BLAST of EMLSAG00000000733 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold2498_size15023-processed-gene-0.1 (protein:Tk12056 transcript:snap_masked-scaffold2498_size15023-processed-gene-0.1-mRNA-1 annotation:"vitamin d3 receptor b-like") HSP 1 Score: 82.8037 bits (203), Expect = 9.768e-17 Identity = 36/94 (38.30%), Postives = 52/94 (55.32%), Query Frame = 0
Query: 22 RSGNSACGGSDSNNSVHN--AQIEIIPCKVCGDKSSG-VHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGM 112
R G+S CG + I + CKVC D ++ +HYG I C C+ FFRR ++ Y C + K+C + + R CQ+CR QKC+A+GM
Sbjct: 47 RGGHSICGKASQGKPKRKRPKFIRKVECKVCSDVANDHIHYGAIACYSCRAFFRRGVNANAPYYCSQNKSCSITKHTRKHCQYCRFQKCMAIGM 140
BLAST of EMLSAG00000000733 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold1268_size51707-processed-gene-0.2 (protein:Tk07212 transcript:snap_masked-scaffold1268_size51707-processed-gene-0.2-mRNA-1 annotation:"vitamin d3 receptor b-like") HSP 1 Score: 82.8037 bits (203), Expect = 9.768e-17 Identity = 36/94 (38.30%), Postives = 52/94 (55.32%), Query Frame = 0
Query: 22 RSGNSACGGSDSNNSVHN--AQIEIIPCKVCGDKSSG-VHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGM 112
R G+S CG + I + CKVC D ++ +HYG I C C+ FFRR ++ Y C + K+C + + R CQ+CR QKC+A+GM
Sbjct: 47 RGGHSICGKASQGKPKRKRPKFIRKVECKVCSDVANDHIHYGAIACYSCRAFFRRGVNANAPYYCSQNKSCSITKHTRKHCQYCRFQKCMAIGM 140
BLAST of EMLSAG00000000733 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold80_size398941-snap-gene-2.18 (protein:Tk02824 transcript:maker-scaffold80_size398941-snap-gene-2.18-mRNA-1 annotation:"zygotic gap protein knirps") HSP 1 Score: 76.2554 bits (186), Expect = 2.855e-16 Identity = 32/71 (45.07%), Postives = 46/71 (64.79%), Query Frame = 0
Query: 47 CKVCGDKSSGVHYGVITCEGCKGFF-RRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDG 116
C+VC + ++G H+G TCEGCK FF R + + + C C+VD+ NR C+ CRL+KCL +GMS+ G
Sbjct: 38 CRVCQEPAAGYHFGAFTCEGCKSFFGRTCNNQSIIHDCKNNYKCVVDKKNRTACKACRLRKCLLVGMSKSG 108
BLAST of EMLSAG00000000733 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold323_size206388-snap-gene-1.16 (protein:Tk12478 transcript:maker-scaffold323_size206388-snap-gene-1.16-mRNA-1 annotation:"hypothetical protein DAPPUDRAFT_304351") HSP 1 Score: 79.337 bits (194), Expect = 9.577e-16 Identity = 34/72 (47.22%), Postives = 44/72 (61.11%), Query Frame = 0
Query: 42 IEIIPCKVCGDKSSG-VHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGM 112
I I+ C VCGD ++ VHYG I C C+ FFRRS S+ +Y+C R C V + R CQ CR KC+ +GM
Sbjct: 50 IRIVSCSVCGDIANDHVHYGAIACYSCRAFFRRSVSNEAHYECSRNSKCPVTKETRKHCQSCRFSKCVDIGM 121
BLAST of EMLSAG00000000733 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold80_size398941-processed-gene-2.10 (protein:Tk02829 transcript:snap_masked-scaffold80_size398941-processed-gene-2.10-mRNA-1 annotation:"GI11566") HSP 1 Score: 78.5666 bits (192), Expect = 2.045e-15 Identity = 38/99 (38.38%), Postives = 53/99 (53.54%), Query Frame = 0
Query: 47 CKVCGDKSSGVHYGVITCEGCKGFFRRS--QSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDGGGALXPSGRSSHNGNSPDSSCFDTQQQ 143
C+VC + ++G H+G TCEGCK FF R+ SV+ +C C +++ NR C+ CRL+KCL +GMS+ G R N C QQQ
Sbjct: 38 CRVCSEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQ-ECKNNYRCEINKKNRTTCKACRLRKCLLVGMSKSG-------SRYGRRSNWFKIHCLMQQQQ 128 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000733 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 25
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BLAST of EMLSAG00000000733 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
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BLAST of EMLSAG00000000733 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 25
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BLAST of EMLSAG00000000733 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 25
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BLAST of EMLSAG00000000733 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 25
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BLAST of EMLSAG00000000733 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
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BLAST of EMLSAG00000000733 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1117:84476..96586+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000733-683499 ID=EMLSAG00000000733-683499|Name=EMLSAG00000000733|organism=Lepeophtheirus salmonis|type=gene|length=12111bp|location=Sequence derived from alignment at LSalAtl2s1117:84476..96586+ (Lepeophtheirus salmonis)back to top Add to Basket
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