EMLSAG00000000780, EMLSAG00000000780-683546 (gene) Lepeophtheirus salmonis

Overview


Name	EMLSAG00000000780
Unique Name	EMLSAG00000000780-683546
Type	gene
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of EMLSAG00000000780 vs. C. finmarchicus
Match: gi|592805238|gb|GAXK01149330.1| (TSA: Calanus finmarchicus comp96297_c4_seq1 transcribed RNA sequence)

HSP 1 Score: 51.2174 bits (121), Expect = 2.187e-7
Identity = 34/132 (25.76%), Postives = 59/132 (44.70%), Query Frame = 0

Query:   39 SHFYYAGSPKNRTYNTISLYNGHGFMGNTQMFDFSTGFSAQYGDGKSD--KGYQPWNLYSERGYKGDYISVYSSSIEKCEPAFYLELKDIGPFGVKVSSSRLECFSKY----IFKGVAVPKNSTRIFIAKQL 164
            S   + G+P +  Y+T+++Y    F+G+ +     T         +S    G  PW LY    Y G  + V+ +S   C P +Y   + +G    + SS+R  C+++     I  GV +  N T  F ++ L
Sbjct:  427 SSLRFTGAPDDYLYDTLNIYFSDYFIGDEEFMYNDTPLLNYDNRARSVIVTGCSPWTLYQYDHYSGSAMCVFPASTSDCTPGYYTTSQSLGSLAGQASSARKGCYAEEKVFPINYGVKMEGNGTSGFFSRDL 822

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BLAST of EMLSAG00000000780 vs. C. finmarchicus
Match: gi|592909388|gb|GAXK01048987.1| (TSA: Calanus finmarchicus comp65445_c2_seq3 transcribed RNA sequence)

HSP 1 Score: 49.2914 bits (116), Expect = 2.933e-7
Identity = 29/104 (27.88%), Postives = 47/104 (45.19%), Query Frame = 0

Query:   43 YAGSPKNRTYNTISLYNGHGFMGNTQMFDFSTGFSAQYGDGKSD---KGYQPWNLYSERGYKGDYISVYSSSIEKCEPAFYLELKDIGPFGVKVSSSRLECFSK 143
            + G+P +  Y+T+++Y    F+G+ + F +       Y +        G  PW LY    Y G  + V+ SS   C P  Y     +     KVSS+R  C++K
Sbjct:    4 FTGAPDDWNYDTLNIYFNDFFIGDEE-FTYDDKTQLNYDNRAMSVIVTGCSPWTLYESDHYTGSAMCVFPSSSTACTPGLYPTSDSLSNLAGKVSSARKGCYAK 312

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BLAST of EMLSAG00000000780 vs. C. finmarchicus
Match: gi|592909389|gb|GAXK01048986.1| (TSA: Calanus finmarchicus comp65445_c2_seq2 transcribed RNA sequence)

HSP 1 Score: 49.2914 bits (116), Expect = 3.578e-7
Identity = 29/104 (27.88%), Postives = 47/104 (45.19%), Query Frame = 0

Query:   43 YAGSPKNRTYNTISLYNGHGFMGNTQMFDFSTGFSAQYGDGKSD---KGYQPWNLYSERGYKGDYISVYSSSIEKCEPAFYLELKDIGPFGVKVSSSRLECFSK 143
            + G+P +  Y+T+++Y    F+G+ + F +       Y +        G  PW LY    Y G  + V+ SS   C P  Y     +     KVSS+R  C++K
Sbjct:   44 FTGAPDDWNYDTLNIYFNDFFIGDEE-FTYDDKTQLNYDNRAMSVIVTGCSPWTLYESDHYTGSAMCVFPSSSTACTPGLYPTSDSLSNLAGKVSSARKGCYAK 352

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BLAST of EMLSAG00000000780 vs. C. finmarchicus
Match: gi|592909384|gb|GAXK01048991.1| (TSA: Calanus finmarchicus comp65445_c4_seq1 transcribed RNA sequence)

HSP 1 Score: 49.6766 bits (117), Expect = 7.397e-7
Identity = 29/104 (27.88%), Postives = 47/104 (45.19%), Query Frame = 0

Query:   43 YAGSPKNRTYNTISLYNGHGFMGNTQMFDFSTGFSAQYGDGKSD---KGYQPWNLYSERGYKGDYISVYSSSIEKCEPAFYLELKDIGPFGVKVSSSRLECFSK 143
            + G+P +  Y+T+++Y    F+G+ + F +       Y +        G  PW LY    Y G  + V+ SS   C P  Y     +     KVSS+R  C++K
Sbjct:  151 FTGAPDDWNYDTLNIYFNDFFIGDEE-FTYDDKTQLNYDNRAMSVIVTGCSPWTLYESDHYTGSAMCVFPSSSTACTPGLYPTSDSLSNLAGKVSSARKGCYAK 459

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BLAST of EMLSAG00000000780 vs. C. finmarchicus
Match: gi|592909390|gb|GAXK01048985.1| (TSA: Calanus finmarchicus comp65445_c2_seq1 transcribed RNA sequence)

HSP 1 Score: 48.1358 bits (113), Expect = 1.429e-6
Identity = 29/104 (27.88%), Postives = 47/104 (45.19%), Query Frame = 0

Query:   43 YAGSPKNRTYNTISLYNGHGFMGNTQMFDFSTGFSAQYGDGKSD---KGYQPWNLYSERGYKGDYISVYSSSIEKCEPAFYLELKDIGPFGVKVSSSRLECFSK 143
            + G+P +  Y+T+++Y    F+G+ + F +       Y +        G  PW LY    Y G  + V+ SS   C P  Y     +     KVSS+R  C++K
Sbjct:  114 FTGAPDDWNYDTLNIYFNDFFIGDEE-FTYDDKTQLNYDNRAMSVIVTGCSPWTLYESDHYTGSAMCVFPSSSTACTPGLYPTSDSLSNLAGKVSSARKGCYAK 422

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BLAST of EMLSAG00000000780 vs. C. finmarchicus
Match: gi|592953641|gb|GAXK01004912.1| (TSA: Calanus finmarchicus comp5770152_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 45.4394 bits (106), Expect = 8.848e-6
Identity = 23/54 (42.59%), Postives = 32/54 (59.26%), Query Frame = 0

Query:   90 QPWNLYSERGYKGDYISVYSSSIEKCEPAFYLELKDIGPFGVKVSSSRLECFSK 143
            +P+ +Y +  Y+GD I V+ SS   C P FY E + +G F  KV S R  CF+K
Sbjct:   39 RPFTIYEKWDYQGDAICVFPSSTNFCNPGFYSESEMLGNFSGKVYSIRKGCFAK 200

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BLAST of EMLSAG00000000780 vs. C. finmarchicus
Match: gi|592806332|gb|GAXK01148236.1| (TSA: Calanus finmarchicus comp1026702_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 44.2838 bits (103), Expect = 1.058e-5
Identity = 26/81 (32.10%), Postives = 41/81 (50.62%), Query Frame = 0

Query:   88 GYQPWNLYSERGYKGDYISVYSSSIEKCEPAFYLELKDIGPFGVKVSSSRLECFS-KYIF---KGVAVPKNSTR-IFIAKQ 163
            G   W LY    Y+G  + V+ S +  C P FY + + +G    +VSS+R  CF+ K  +    G+  P+N    IF +K+
Sbjct:   72 GCSAWTLYQYDNYQGAALCVFPSHMGNCNPGFYSDSEQLGVLAGQVSSARRGCFATKKAYPENNGIKAPQNVPNWIFPSKK 314

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BLAST of EMLSAG00000000780 vs. C. finmarchicus
Match: gi|592909385|gb|GAXK01048990.1| (TSA: Calanus finmarchicus comp65445_c2_seq6 transcribed RNA sequence)

HSP 1 Score: 41.9726 bits (97), Expect = 8.002e-5
Identity = 20/56 (35.71%), Postives = 26/56 (46.43%), Query Frame = 0

Query:   88 GYQPWNLYSERGYKGDYISVYSSSIEKCEPAFYLELKDIGPFGVKVSSSRLECFSK 143
            G  PW LY    Y G  + V+ SS   C P  Y     +     KVSS+R  C++K
Sbjct:    7 GCSPWTLYESDHYTGSAMCVFPSSSTACTPGLYPTSDSLSNLAGKVSSARKGCYAK 174

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BLAST of EMLSAG00000000780 vs. C. finmarchicus
Match: gi|592766454|gb|GAXK01188114.1| (TSA: Calanus finmarchicus comp10051_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 43.5134 bits (101), Expect = 1.020e-4
Identity = 25/108 (23.15%), Postives = 50/108 (46.30%), Query Frame = 0

Query:   39 SHFYYAGSPKNRTYNTISLYNGHGFMGNTQMFDFSTGFSAQYGDGKSD---KGYQPWNLYSERGYKGDYISVYSSSIEKCEPAFYLELKDIGPFGVKVSSSRLECFSK 143
            S   + G+P +  Y+T+++Y    F+G+ + F ++      Y +        G   W +Y    Y+G+ + ++      C P  Y   + +G    +VSS+R  C++K
Sbjct:  303 SSLRFTGAPDDWKYDTLNIYFNDYFIGDEE-FTYNDMPQLNYDNRARSIIVTGCDAWTIYQYDNYQGNAMCLFPGDSSACNPGLYPNSQTLGSLAGQVSSARRGCYAK 623

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BLAST of EMLSAG00000000780 vs. C. finmarchicus
Match: gi|592798422|gb|GAXK01156146.1| (TSA: Calanus finmarchicus comp284306_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 40.0466 bits (92), Expect = 1.549e-3
Identity = 25/91 (27.47%), Postives = 40/91 (43.96%), Query Frame = 0

Query:   39 SHFYYAGSPKNRTYNTISLYNGHGFMG--NTQMFDFSTGFSAQYGDGKSDKGYQPWNLYSERGYKGDYISVYSSSIEKCEPAFYLELKDIG 127
            S   YAGS  +  +++I+LY G  F G  +  +F  + G  +         G   W LY    Y+G  + V+      C+P FY +   +G
Sbjct:  362 SSLRYAGSKADWCFDSINLYYGLYFSGYESEWIFKDTPGLGSVSAQSIIVSGGSAWTLYEGENYQGRAVCVFPDVAGGCQPEFYFDFALVG 634

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BLAST of EMLSAG00000000780 vs. L. salmonis peptides
Match: EMLSAP00000000780 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1127:109598:110255:-1 gene:EMLSAG00000000780 transcript:EMLSAT00000000780 description:"snap_masked-LSalAtl2s1127-processed-gene-0.4")

HSP 1 Score: 337.421 bits (864), Expect = 2.010e-119
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0

Query:    1 MKTIIVSPLFNKLSLGILRDRIKTLGNSQSTFGERITRSHFYYAGSPKNRTYNTISLYNGHGFMGNTQMFDFSTGFSAQYGDGKSDKGYQPWNLYSERGYKGDYISVYSSSIEKCEPAFYLELKDIGPFGVKVSSSRLECFSKYIFKGVAVPKNSTRIFIAKQL 164
            MKTIIVSPLFNKLSLGILRDRIKTLGNSQSTFGERITRSHFYYAGSPKNRTYNTISLYNGHGFMGNTQMFDFSTGFSAQYGDGKSDKGYQPWNLYSERGYKGDYISVYSSSIEKCEPAFYLELKDIGPFGVKVSSSRLECFSKYIFKGVAVPKNSTRIFIAKQL
Sbjct:    1 MKTIIVSPLFNKLSLGILRDRIKTLGNSQSTFGERITRSHFYYAGSPKNRTYNTISLYNGHGFMGNTQMFDFSTGFSAQYGDGKSDKGYQPWNLYSERGYKGDYISVYSSSIEKCEPAFYLELKDIGPFGVKVSSSRLECFSKYIFKGVAVPKNSTRIFIAKQL 164

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BLAST of EMLSAG00000000780 vs. L. salmonis peptides
Match: EMLSAP00000005933 (pep:novel supercontig:LSalAtl2s:LSalAtl2s320:21267:21614:-1 gene:EMLSAG00000005933 transcript:EMLSAT00000005933 description:"augustus_masked-LSalAtl2s320-processed-gene-0.0")

HSP 1 Score: 115.931 bits (289), Expect = 2.817e-33
Identity = 61/103 (59.22%), Postives = 69/103 (66.99%), Query Frame = 0

Query:   22 IKTLGNSQSTFGERITRSHFYYAGSPKNRTYNTISLYNGHGFMGNTQMFDFSTGFSAQYGDGKS--DKGYQPWNLYSERGYKGDYISVYSSSIEKCEPAFYLE 122
            + TL NSQST  ERI          PKN ++NTI+ Y+GH FM NTQMFDF  GF  Q+G GKS      QPW LYSERGYKGD+I VY SSIE CEP FYL+
Sbjct:   14 VDTLENSQSTVRERI----------PKNMSFNTINQYDGHKFMANTQMFDFGAGFFVQHGVGKSIIVAVCQPWILYSERGYKGDHIGVYCSSIENCEPGFYLK 106

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BLAST of EMLSAG00000000780 vs. L. salmonis peptides
Match: EMLSAP00000001479 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1251:119741:120448:1 gene:EMLSAG00000001479 transcript:EMLSAT00000001479 description:"augustus_masked-LSalAtl2s1251-processed-gene-0.0")

HSP 1 Score: 118.242 bits (295), Expect = 8.089e-33
Identity = 61/123 (49.59%), Postives = 77/123 (62.60%), Query Frame = 0

Query:   43 YAGSPKNRTYNTISLYNGHGFMGNTQMF--DFSTGFSAQYGDGKSDKGYQPWNLYSERGYKGDYISVYSSSIEKCEPAFYLELKDIGPFGVKVSSSRLECFSKYIFKGVAVPKNSTRIFIAKQ 163
            Y+G+ +N  Y+TI+ Y G GFMGN Q F  D  +     +G+     G  PW LY ER Y+GD I V  +S +KCEP FY++ +D G F  KVSS R  CFSK +FKGV VP NSTR+F  KQ
Sbjct:  111 YSGAGENMKYSTINFYEGSGFMGNEQYFYSDTPSLNHDNFGESIIVTGCDPWTLYEERSYRGDRICVXPASTQKCEPGFYIQPQDFGHFVNKVSSVRKGCFSKKVFKGVGVPANSTRMFTPKQ 233

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BLAST of EMLSAG00000000780 vs. L. salmonis peptides
Match: EMLSAP00000004662 (pep:novel supercontig:LSalAtl2s:LSalAtl2s242:809507:810193:1 gene:EMLSAG00000004662 transcript:EMLSAT00000004662 description:"augustus_masked-LSalAtl2s242-processed-gene-8.1")

HSP 1 Score: 75.0998 bits (183), Expect = 4.303e-17
Identity = 42/121 (34.71%), Postives = 65/121 (53.72%), Query Frame = 0

Query:   43 YAGSPKNRTYNTISLYNGHGFMGNTQMF--DFSTGFSAQYGDGKSDKGYQPWNLYSERGYKGDYISVYSSSI--EKCEPAFYLELKDIGPFGVKVSSSRLECFSKYIFKGVAVPKNSTRIF 159
            Y+G+     ++T++ Y   GF+GN +M+  D +      +G      G +PW L++E  + G++I +Y  SI    C P F+   +D G F  KV S RL CFS   FKG+ +  N+TR F
Sbjct:  106 YSGTESGLQFDTLNFYKEPGFIGNEEMYYQDEAILTRPFFGKSIILTGCKPWTLFNETHFHGEHICIYPRSISSNNCTPGFFEAPRDFGDFVDKVRSIRLGCFSGITFKGLDLAINTTRYF 226

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BLAST of EMLSAG00000000780 vs. L. salmonis peptides
Match: EMLSAP00000003853 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2094:10695:15319:1 gene:EMLSAG00000003853 transcript:EMLSAT00000003853 description:"snap_masked-LSalAtl2s2094-processed-gene-0.1")

HSP 1 Score: 72.0182 bits (175), Expect = 5.760e-16
Identity = 35/86 (40.70%), Postives = 49/86 (56.98%), Query Frame = 0

Query:   43 YAGSPKNRTYNTISLYNGHGFMGNTQMFDFSTG--FSAQYGDGKSDKGYQPWNLYSERGYKGDYISVYSSSIEKCEPAFYLELKDI 126
            Y+G+ +N  Y+T++ Y   GFMG+ Q F F     +   +G      G QPW LY    Y+GD+I +Y SS + CEP FYLE +D 
Sbjct:  117 YSGANENMKYSTLNFYEESGFMGDEQYFYFDNPSLYHDNFGKSIILTGCQPWTLYEHTSYRGDHICIYPSSTQNCEPGFYLEPQDF 202

HSP 2 Score: 56.225 bits (134), Expect = 2.988e-10
Identity = 28/68 (41.18%), Postives = 37/68 (54.41%), Query Frame = 0

Query:   62 GFMGNTQMFDFSTG--FSAQYGDGKSDKGYQPWNLYSERGYKGDYISVYSSSIEKCEPAFYLELKDIG 127
            GFMG+ Q F  +    +   +G      G QPW LY    Y+GD+I +Y SS + CEP F+ E KD G
Sbjct:  205 GFMGDEQYFYLNNPSFYHDNFGKSIILTGCQPWTLYEHTLYRGDHICIYPSSTQNCEPGFFPEPKDFG 272

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BLAST of EMLSAG00000000780 vs. L. salmonis peptides
Match: EMLSAP00000003799 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2069:15746:16444:1 gene:EMLSAG00000003799 transcript:EMLSAT00000003799 description:"augustus_masked-LSalAtl2s2069-processed-gene-0.2")

HSP 1 Score: 67.0106 bits (162), Expect = 2.664e-14
Identity = 37/105 (35.24%), Postives = 52/105 (49.52%), Query Frame = 0

Query:   54 TISLYNGHGFMGNTQMFDFSTGF--SAQYGDGKSDKGYQPWNLYSERGYKGDYISVYSSSIEKCEPAFYLELKDIGPFGVKVSSSRLECFSKYIFKGVAVPKNST 156
            +I+ Y   GF G  + F   T +     +GD     G  PW LY E+ + GD+I VY S    C P F+  L+++  F  KVSS R+ CFS        +P N+T
Sbjct:  115 SINFYEREGFAGEEEYFSNDTPYFRKDNFGDSIIVTGCSPWTLYEEKYFAGDHICVYPSDENNCLPGFFPNLENLPQFDGKVSSVRVGCFSDRKISSPFLPANAT 219

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BLAST of EMLSAG00000000780 vs. L. salmonis peptides
Match: EMLSAP00000003145 (pep:novel supercontig:LSalAtl2s:LSalAtl2s175:564159:564836:1 gene:EMLSAG00000003145 transcript:EMLSAT00000003145 description:"augustus_masked-LSalAtl2s175-processed-gene-5.3")

HSP 1 Score: 63.1586 bits (152), Expect = 5.551e-13
Identity = 41/107 (38.32%), Postives = 57/107 (53.27%), Query Frame = 0

Query:   49 NRTYNTISLYNGHGFMGNTQ-MFDFSTGFS-AQYGDGKSDKGYQPWNLYSERGYKGDYISVYSSSIEK-CEPAFYLELKDIGPFGVKVSSSRLECFSKYIFKGVAVP 152
            + + NT++ Y G GFMG  Q ++  S   +   +G      G +PW LY    + G  I VY +S+   C+P F++E  D G F  +VSS RL CFSK  F  VA P
Sbjct:  107 DHSANTLNFYEGPGFMGIEQNVYKDSPKLNYDNFGKSIIITGCKPWTLYETENFGGSSICVYPNSMSSPCKPGFFVEPSDFGHFADQVSSVRLGCFSKSSF--VAKP 211

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BLAST of EMLSAG00000000780 vs. L. salmonis peptides
Match: EMLSAP00000005478 (pep:novel supercontig:LSalAtl2s:LSalAtl2s294:475549:479341:1 gene:EMLSAG00000005478 transcript:EMLSAT00000005478 description:"snap_masked-LSalAtl2s294-processed-gene-4.12")

HSP 1 Score: 55.4546 bits (132), Expect = 4.012e-10
Identity = 29/93 (31.18%), Postives = 48/93 (51.61%), Query Frame = 0

Query:   53 NTISLYNGHGFMGNTQMFDFSTGFSAQYGDGKSD--KGYQPWNLYSERGYKGDYISVYSSSIEKCEPAFYLELKDIGPFGVKVSSSRLECFSK 143
            +T++ Y   GF G  Q +     F  +  +  S    G +PW LY ++ + GD I V+    ++C P F+   +D G FG +  S+R+ CFS+
Sbjct:  117 STLNFYEKEGFGGREQYYSGDIPFLMEEMNFHSLILTGCEPWTLYDDKFFDGDRICVFPGDEDRCYPGFFPRHEDFGYFGSRXQSARIGCFSE 209

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BLAST of EMLSAG00000000780 vs. L. salmonis peptides
Match: EMLSAP00000003756 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2028:36330:37007:-1 gene:EMLSAG00000003756 transcript:EMLSAT00000003756 description:"augustus_masked-LSalAtl2s2028-processed-gene-0.0")

HSP 1 Score: 54.299 bits (129), Expect = 9.225e-10
Identity = 39/103 (37.86%), Postives = 49/103 (47.57%), Query Frame = 0

Query:   53 NTISLYNGHGFMGNTQMF--DFSTGFSAQYGDGKSDKGYQPWNLYSERGYKGDYISVYSS-SIEKCEPAFYLELKDIGPFGVKVSSSRLECFSKYIFKGVAVP 152
            NTI+ Y G GFMG  Q    D        +G      G +PW LY +  + G  I +Y + S   C+P F  +    G F  +VSS RL CFSK  F  VA P
Sbjct:  111 NTINFYEGPGFMGIEQSVQRDSPKLNYDNFGKSIIITGCKPWTLYEKENFGGKKICIYPNLSSTPCKPGFLEKPSAFGNFADQVSSVRLGCFSKSSF--VAKP 211

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BLAST of EMLSAG00000000780 vs. L. salmonis peptides
Match: EMLSAP00000001539 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1268:62804:63481:-1 gene:EMLSAG00000001539 transcript:EMLSAT00000001539 description:"augustus_masked-LSalAtl2s1268-processed-gene-0.1")

HSP 1 Score: 52.373 bits (124), Expect = 3.856e-9
Identity = 39/103 (37.86%), Postives = 48/103 (46.60%), Query Frame = 0

Query:   53 NTISLYNGHGFMGNTQMF--DFSTGFSAQYGDGKSDKGYQPWNLYSERGYKGDYISVYSS-SIEKCEPAFYLELKDIGPFGVKVSSSRLECFSKYIFKGVAVP 152
            NTI+ Y G GFMG  Q    D        +G      G +PW LY +  + G  I VY + S   C+P F  +    G F  +VSS RL CFS   F  VA P
Sbjct:  111 NTINFYEGPGFMGIEQSVQRDSPKLNYDNFGKSIIITGCKPWTLYEKENFGGKKICVYPNFSSTPCKPGFLEKPSAFGNFADQVSSVRLGCFSMSSF--VAEP 211

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BLAST of EMLSAG00000000780 vs. nr
Match: gi|290561783|gb|ADD38289.1| (Gamma-crystallin A [Lepeophtheirus salmonis])

HSP 1 Score: 120.939 bits (302), Expect = 4.797e-31
Identity = 61/124 (49.19%), Postives = 77/124 (62.10%), Query Frame = 0

Query:   43 YAGSPKNRTYNTISLYNGHGFMGNTQMFDFSTG--FSAQYGDGKSDKGYQPWNLYSERGYKGDYISVYSSSIEKCEPAFYLELKDIGPFGVKVSSSRLECFSKYIFKGVAVPKNSTRIFIAKQL 164
            Y+G+ +N  Y+T++ Y   GFMG+ Q F F     +   +G      G QPW LY    Y+GD+I +Y SS + CEP FYLE +D G F  KVSS R+ CFSK +FKGV VP NSTRIF  KQL
Sbjct:  111 YSGANENMKYSTLNFYEESGFMGDEQYFYFDNPSLYHDNFGKSIILTGCQPWTLYEHTSYRGDHICIYPSSTQNCEPGFYLEPQDFGHFVNKVSSIRMGCFSKKVFKGVGVPANSTRIFTPKQL 234

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BLAST of EMLSAG00000000780 vs. nr
Match: gi|290561421|gb|ADD38111.1| (Beta-crystallin A1 [Lepeophtheirus salmonis])

HSP 1 Score: 67.0106 bits (162), Expect = 1.820e-10
Identity = 37/105 (35.24%), Postives = 52/105 (49.52%), Query Frame = 0

Query:   54 TISLYNGHGFMGNTQMFDFSTGF--SAQYGDGKSDKGYQPWNLYSERGYKGDYISVYSSSIEKCEPAFYLELKDIGPFGVKVSSSRLECFSKYIFKGVAVPKNST 156
            +I+ Y   GF G  + F   T +     +GD     G  PW LY E+ + GD+I VY S    C P F+  L+++  F  KVSS R+ CFS        +P N+T
Sbjct:  115 SINFYEREGFAGEEEYFSNDTPYFRKDNFGDSIIVTGCSPWTLYEEKYFAGDHICVYPSDENNCLPGFFPNLENLPQFDGKVSSVRVGCFSDRKISSPFLPANAT 219

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BLAST of EMLSAG00000000780 vs. nr
Match: gi|290561120|gb|ADD37962.1| (Gamma-crystallin-1 [Lepeophtheirus salmonis])

HSP 1 Score: 57.7658 bits (138), Expect = 4.220e-7
Identity = 30/93 (32.26%), Postives = 49/93 (52.69%), Query Frame = 0

Query:   53 NTISLYNGHGFMGNTQMFDFSTGFSAQYGDGKSD--KGYQPWNLYSERGYKGDYISVYSSSIEKCEPAFYLELKDIGPFGVKVSSSRLECFSK 143
            +T++ Y   GF G  Q +     F  +  +  S    G +PW LY ++ + GD I V+    ++C P F+   +D G FG +V S+R+ CFS+
Sbjct:  117 STLNFYEKEGFGGREQYYSGDIPFLMEEMNFHSLILTGCEPWTLYDDKFFDGDRICVFPGDEDRCYPGFFPRHEDFGYFGSRVQSARIGCFSE 209

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BLAST of EMLSAG00000000780 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold94_size379870-snap-gene-2.29 (protein:Tk09638 transcript:maker-scaffold94_size379870-snap-gene-2.29-mRNA-1 annotation:"gamma-crystallin d")

HSP 1 Score: 65.0846 bits (157), Expect = 1.505e-13
Identity = 38/110 (34.55%), Postives = 57/110 (51.82%), Query Frame = 0

Query:   39 SHFYYAGSPKNRTYNTISLYNGHGFMGNTQMF-DFSTGFS-AQYGDGKSDKGYQPWNLYSERGYKGDYISVYSSSIEKCEPAFYLELKDIGPFGVKVSSSRLECFSKYIF 146
            S   +AG+P    Y+ ++LY G  F+G  Q F D +   + A++G      G  PW LYSE  YKG+ I ++ +    C P F+ +  D+G     VSS +  C +K IF
Sbjct:  128 SSLRFAGAPDGYNYDVLTLYAGDYFIGREQYFYDEAPQLNFAKFGRSAIVNGCSPWTLYSEDNYKGNAICLHPADESNCYPGFFPKPIDLGILANVVSSVKRGCHAKAIF 237

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BLAST of EMLSAG00000000780 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold94_size379870-snap-gene-2.32 (protein:Tk09637 transcript:maker-scaffold94_size379870-snap-gene-2.32-mRNA-1 annotation:"gamma-crystallin a")

HSP 1 Score: 63.5438 bits (153), Expect = 1.324e-12
Identity = 44/128 (34.38%), Postives = 64/128 (50.00%), Query Frame = 0

Query:   43 YAGSPKNRTYNTISLYNGHGFMGNTQMF-DFSTGFS-AQYGDGKSDKGYQPWNLYSERGYKGDYISVYSSSIEKCEPAFYLELKDIGPFGVKVSSSRLECFSKYIFKGVAV-PKN---STRIFIAKQL 164
            +AG+P    Y+TI+ Y G  FMG  Q F D +  F+    G      G  PW +Y    Y+G    +Y S  E C P+F+ E  D+G    +VSS++  CFS     G  + P++   S+ +FIA  L
Sbjct:  118 FAGAPDGYKYDTINFYEGKNFMGLEQFFYDDAPQFNYDNLGRSVIVTGCSPWTIYQYDNYQGYSACLYPSDTENCYPSFFPEPSDLGFLSDQVSSAKKGCFSNNKIHGKTLNPEHGSSSSYVFIALAL 245

HSP 2 Score: 56.225 bits (134), Expect = 4.281e-10
Identity = 34/103 (33.01%), Postives = 51/103 (49.51%), Query Frame = 0

Query:   43 YAGSPKNRTYNTISLYNGHGFMGNTQMF-DFSTGFS-AQYGDGKSDKGYQPWNLYSERGYKGDYISVYSSSIEKCEPAFYLELKDIGPFGVKVSSSRLECFSK 143
            ++G+P    Y+TI+ Y G  FMG  Q F D +  F+    G      G  PW +Y    Y+G    +Y S    C P+F+ +  D+G    +VSS++  CFS 
Sbjct:  354 FSGAPDGYKYDTINFYEGKNFMGLEQFFYDDAPQFNYDNLGRSVIVTGCSPWTIYQYDNYQGYSACLYPSDTANCYPSFFPDPSDLGFLSDQVSSTKKGCFSN 456

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BLAST of EMLSAG00000000780 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold94_size379870-snap-gene-2.28 (protein:Tk09640 transcript:maker-scaffold94_size379870-snap-gene-2.28-mRNA-1 annotation:"beta-crystallin b1")

HSP 1 Score: 62.3882 bits (150), Expect = 1.439e-12
Identity = 39/112 (34.82%), Postives = 59/112 (52.68%), Query Frame = 0

Query:   43 YAGSPKNRTYNTISLYNGHGFMGNTQMFDFSTGFSAQYGD-GKSD--KGYQPWNLYSERGYKGDYISVYSSSIEKCEPAFYLELKDIGPFGVKVSSSRLECFSKYIFKGVAV 151
            ++G+P    Y+TI+LY G  FMG  Q F +   +   Y + G+S    G  PW  Y    ++G     Y S  ++C PAF+   +D+G    ++SS R  CFSK I +G A+
Sbjct:  124 FSGAPDGYKYDTINLYEGDYFMGMEQ-FLYDDAYQMNYDNFGRSMIVTGCSPWTAYQYDNFQGYSKCFYPSDTQQCHPAFFTS-QDLGSMDRQISSLRRGCFSKDIVRGKAL 233

The following BLAST results are available for this feature:

BLAST of EMLSAG00000000780 vs. GO
BLAST of EMLSAG00000000780 vs. C. finmarchicus
BLAST of EMLSAG00000000780 vs. L. salmonis peptides
BLAST of EMLSAG00000000780 vs. SwissProt
BLAST of EMLSAG00000000780 vs. Select Arthropod Genomes
BLAST of EMLSAG00000000780 vs. nr
BLAST of EMLSAG00000000780 vs. Tigriopus kingsejongenis genes

BLAST of EMLSAG00000000780 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000000780 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 11


Match Name	E-value	Identity	Description
gi\|592805238\|gb\|GAXK01149330.1\|	2.187e-7	25.76	TSA: Calanus finmarchicus comp96297_c4_seq1 transc...	[more]
gi\|592909388\|gb\|GAXK01048987.1\|	2.933e-7	27.88	TSA: Calanus finmarchicus comp65445_c2_seq3 transc...	[more]
gi\|592909389\|gb\|GAXK01048986.1\|	3.578e-7	27.88	TSA: Calanus finmarchicus comp65445_c2_seq2 transc...	[more]
gi\|592909384\|gb\|GAXK01048991.1\|	7.397e-7	27.88	TSA: Calanus finmarchicus comp65445_c4_seq1 transc...	[more]
gi\|592909390\|gb\|GAXK01048985.1\|	1.429e-6	27.88	TSA: Calanus finmarchicus comp65445_c2_seq1 transc...	[more]
gi\|592953641\|gb\|GAXK01004912.1\|	8.848e-6	42.59	TSA: Calanus finmarchicus comp5770152_c0_seq1 tran...	[more]
gi\|592806332\|gb\|GAXK01148236.1\|	1.058e-5	32.10	TSA: Calanus finmarchicus comp1026702_c0_seq1 tran...	[more]
gi\|592909385\|gb\|GAXK01048990.1\|	8.002e-5	35.71	TSA: Calanus finmarchicus comp65445_c2_seq6 transc...	[more]
gi\|592766454\|gb\|GAXK01188114.1\|	1.020e-4	23.15	TSA: Calanus finmarchicus comp10051_c0_seq1 transc...	[more]
gi\|592798422\|gb\|GAXK01156146.1\|	1.549e-3	27.47	TSA: Calanus finmarchicus comp284306_c0_seq1 trans...	[more]

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BLAST of EMLSAG00000000780 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 10


Match Name	E-value	Identity	Description
EMLSAP00000000780	2.010e-119	100.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s1127:1095...	[more]
EMLSAP00000005933	2.817e-33	59.22	pep:novel supercontig:LSalAtl2s:LSalAtl2s320:21267...	[more]
EMLSAP00000001479	8.089e-33	49.59	pep:novel supercontig:LSalAtl2s:LSalAtl2s1251:1197...	[more]
EMLSAP00000004662	4.303e-17	34.71	pep:novel supercontig:LSalAtl2s:LSalAtl2s242:80950...	[more]
EMLSAP00000003853	5.760e-16	40.70	pep:novel supercontig:LSalAtl2s:LSalAtl2s2094:1069...	[more]
EMLSAP00000003799	2.664e-14	35.24	pep:novel supercontig:LSalAtl2s:LSalAtl2s2069:1574...	[more]
EMLSAP00000003145	5.551e-13	38.32	pep:novel supercontig:LSalAtl2s:LSalAtl2s175:56415...	[more]
EMLSAP00000005478	4.012e-10	31.18	pep:novel supercontig:LSalAtl2s:LSalAtl2s294:47554...	[more]
EMLSAP00000003756	9.225e-10	37.86	pep:novel supercontig:LSalAtl2s:LSalAtl2s2028:3633...	[more]
EMLSAP00000001539	3.856e-9	37.86	pep:novel supercontig:LSalAtl2s:LSalAtl2s1268:6280...	[more]

BLAST of EMLSAG00000000780 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000000780 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000000780 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 3


Match Name	E-value	Identity	Description
gi\|290561783\|gb\|ADD38289.1\|	4.797e-31	49.19	Gamma-crystallin A [Lepeophtheirus salmonis]	[more]
gi\|290561421\|gb\|ADD38111.1\|	1.820e-10	35.24	Beta-crystallin A1 [Lepeophtheirus salmonis]	[more]
gi\|290561120\|gb\|ADD37962.1\|	4.220e-7	32.26	Gamma-crystallin-1 [Lepeophtheirus salmonis]	[more]

BLAST of EMLSAG00000000780 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 3


Match Name	E-value	Identity	Description
maker-scaffold94_size379870-snap-gene-2.29	1.505e-13	34.55	protein:Tk09638 transcript:maker-scaffold94_size37...	[more]
maker-scaffold94_size379870-snap-gene-2.32	1.324e-12	34.38	protein:Tk09637 transcript:maker-scaffold94_size37...	[more]
maker-scaffold94_size379870-snap-gene-2.28	1.439e-12	34.82	protein:Tk09640 transcript:maker-scaffold94_size37...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s1127	supercontig	LSalAtl2s1127:109598..110255 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016
Blast vs. GO	2014-04-02
TblastN vs C. finmarchicus TSA	2014-05-09
Blastp vs. self	2014-05-10
Blastp vs. SwissProt	2017-02-10
Blastp vs. Selected Arthropods	2017-02-20
Blastp vs. NR (2/2017)	2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins	2018-04-18

Properties


Property Name	Value
Logic name	ensemblgenomes
Description	snap_masked-LSalAtl2s1127-processed-gene-0.4
Biotype	protein_coding
Evidence	IEA
Note	Gamma-crystallin A [Lepeophtheirus salmonis]

Cross References

External references for this gene


Database	Accession
Ensembl Metazoa (gene)	EMLSAG00000000780 (primary cross-reference)

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
EMLSAT00000000780	EMLSAT00000000780-696627	Lepeophtheirus salmonis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at LSalAtl2s1127:109598..110255-

gene from alignment at LSalAtl2s1127:109598..110255-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAG00000000780-683546 ID=EMLSAG00000000780-683546|Name=EMLSAG00000000780|organism=Lepeophtheirus salmonis|type=gene|length=658bp|location=Sequence derived from alignment at LSalAtl2s1127:109598..110255- (Lepeophtheirus salmonis)
ATGAAAACAATCATCGTGAGCCCCTTATTTAATAAACTTTCCCTCGGGAT
TCTGAGGGACAGGATAAGTAATTTTTTTTAATCTTTAAGATTATTTAGAA
CTTAAAGGAATCAACACAAAAATTCCAGCCAACTTTCCGAGTTTACATAA
TTATGTTTGGACAATTTAGTCAAATCTGTAATCCTCAATTGATTTTGGAT
TTCCWTCCAAGACGTATATTTTAATTGCAGAAACTTTGGGAAACTCTCAG
TCTACATTCGGGGAAAGGATCACAAGATCCCACTTTTATTATGCTGGATC
ACCCAAAAATAGGACATATAATACTATAAGTCTTTACAATGGACATGGAT
TTATGGGTAACACACAAATGTTTGACTTCAGCACTGGCTTTTCTGCTCAA
TATGGTGATGGAAAATCTGATAAGGGGTACCAACCATGGAATTTATATTC
AGAAAGAGGATACAAGGGCGATTATATTTCTGTTTACTCTTCCTCTATTG
AGAAATGTGAGCCTGCATTTTATCTTGAACTAAAGGATATTGGTCCTTTT
GGAGTTAAGGTATCCAGTTCACGATTGGAATGTTTCTCCAAATATATTTT
CAAAGGAGTAGCTGTTCCAAAAAACTCAACAAGAATTTTTATAGCAAAAC
AACTCTAA

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