EMLSAG00000000927, EMLSAG00000000927-683693 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000927 vs. GO
Match: - (symbol:R4GKI2 "Uncharacterized protein" species:9031 "Gallus gallus" [GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II regulatory region sequence-specific DNA binding" evidence=IEA] [GO:0001105 "RNA polymerase II transcription coactivator activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA] [GO:0001889 "liver development" evidence=IEA] [GO:0002039 "p53 binding" evidence=IEA] [GO:0003407 "neural retina development" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714 "transcription corepressor activity" evidence=IEA] [GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA] [GO:0006337 "nucleosome disassembly" evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0006346 "methylation-dependent chromatin silencing" evidence=IEA] [GO:0007403 "glial cell fate determination" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity" evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG sequence" evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA] [GO:0030198 "extracellular matrix organization" evidence=IEA] [GO:0030216 "keratinocyte differentiation" evidence=IEA] [GO:0030308 "negative regulation of cell growth" evidence=IEA] [GO:0030900 "forebrain development" evidence=IEA] [GO:0030902 "hindbrain development" evidence=IEA] [GO:0030957 "Tat protein binding" evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA] [GO:0035887 "aortic smooth muscle cell differentiation" evidence=IEA] [GO:0043388 "positive regulation of DNA binding" evidence=IEA] [GO:0043923 "positive regulation by host of viral transcription" evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0048562 "embryonic organ morphogenesis" evidence=IEA] [GO:0048730 "epidermis morphogenesis" evidence=IEA] [GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0060318 "definitive erythrocyte differentiation" evidence=IEA] [GO:0060347 "heart trabecula formation" evidence=IEA] [GO:0060766 "negative regulation of androgen receptor signaling pathway" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071778 "WINAC complex" evidence=IEA] GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 Ensembl:ENSGALT00000044462 Uniprot:R4GKI2) HSP 1 Score: 57.7658 bits (138), Expect = 1.729e-10 Identity = 26/63 (41.27%), Postives = 40/63 (63.49%), Query Frame = 0 Query: 1 MGVACPPPSEGAEKKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKN 63 + A + K+Q EA +EKLEKQ ++E ERK RQ+HQE+L +I H +DF+ +H++ Sbjct: 7 LETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRS 69
BLAST of EMLSAG00000000927 vs. GO
Match: - (symbol:brm "brahma" species:7227 "Drosophila melanogaster" [GO:0043044 "ATP-dependent chromatin remodeling" evidence=ISS;IDA] [GO:0045893 "positive regulation of transcription, DNA-templated" evidence=ISS;IDA] [GO:0016887 "ATPase activity" evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity" evidence=NAS] [GO:0003713 "transcription coactivator activity" evidence=ISS;NAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0048096 "chromatin-mediated maintenance of transcription" evidence=NAS] [GO:0005515 "protein binding" evidence=IPI] [GO:0035060 "brahma complex" evidence=IDA;TAS] [GO:0048477 "oogenesis" evidence=TAS] [GO:2000134 "negative regulation of G1/S transition of mitotic cell cycle" evidence=IGI] [GO:0035172 "hemocyte proliferation" evidence=TAS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007474 "imaginal disc-derived wing vein specification" evidence=IMP] [GO:0048666 "neuron development" evidence=IMP] [GO:0007517 "muscle organ development" evidence=IMP] [GO:0048813 "dendrite morphogenesis" evidence=IMP] [GO:0006909 "phagocytosis" evidence=IMP] [GO:0007409 "axonogenesis" evidence=IMP] [GO:0007480 "imaginal disc-derived leg morphogenesis" evidence=IGI] [GO:0008586 "imaginal disc-derived wing vein morphogenesis" evidence=IMP] [GO:0008587 "imaginal disc-derived wing margin morphogenesis" evidence=IMP] [GO:0045742 "positive regulation of epidermal growth factor receptor signaling pathway" evidence=IMP] [GO:0070983 "dendrite guidance" evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP] [GO:0043974 "histone H3-K27 acetylation" evidence=IMP] InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 PROSITE:PS51666 SMART:SM00297 SMART:SM00490 SMART:SM00592 SMART:SM00951 InterPro:IPR027417 SUPFAM:SSF52540 GO:GO:0005524 GO:GO:0045893 EMBL:AE014296 GO:GO:0006909 GO:GO:0003677 GO:GO:0008586 GO:GO:0007474 GO:GO:0048477 GO:GO:0006351 GO:GO:0016887 GO:GO:0007517 GO:GO:0007409 GO:GO:0004386 GO:GO:0045742 GO:GO:0007480 GO:GO:2000134 GO:GO:0043044 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR018359 PROSITE:PS00633 GO:GO:0035060 GO:GO:0008587 KO:K11647 EMBL:M85049 EMBL:AY095048 EMBL:BT009972 PIR:A42091 RefSeq:NP_536745.4 RefSeq:NP_536746.1 RefSeq:NP_730088.1 RefSeq:NP_730089.1 UniGene:Dm.5356 ProteinModelPortal:P25439 SMR:P25439 BioGrid:65055 DIP:DIP-36728N IntAct:P25439 MINT:MINT-6541230 STRING:7227.FBpp0075280 PaxDb:P25439 PRIDE:P25439 EnsemblMetazoa:FBtr0075525 EnsemblMetazoa:FBtr0075526 GeneID:39744 KEGG:dme:Dmel_CG5942 CTD:39744 FlyBase:FBgn0000212 GeneTree:ENSGT00550000074659 InParanoid:P25439 OrthoDB:EOG771265 PhylomeDB:P25439 SignaLink:P25439 ChiTaRS:SMARCA2 GenomeRNAi:39744 NextBio:815155 Bgee:P25439 GO:GO:0070983 GO:GO:0035172 GO:GO:0043974 InterPro:IPR013999 InterPro:IPR014012 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 Uniprot:P25439) HSP 1 Score: 60.077 bits (144), Expect = 4.086e-10 Identity = 29/55 (52.73%), Postives = 40/55 (72.73%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68 K+QG EA +EKLEKQ ++EAERK RQ+H EFL + H +D + FH+NN+ +L Sbjct: 484 KRQGLREARATEKLEKQQKLEAERKRRQKHLEFLAAVLQHGKDLREFHRNNKAQL 538
BLAST of EMLSAG00000000927 vs. GO
Match: - (symbol:SMARCA2 "Probable global transcription activator SNF2L2" species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0008285 "negative regulation of cell proliferation" evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA] [GO:0035887 "aortic smooth muscle cell differentiation" evidence=IEA] [GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA] [GO:0045111 "intermediate filament cytoskeleton" evidence=IDA] [GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF complex" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR014978 Pfam:PF08880 PROSITE:PS51666 SMART:SM00951 GO:GO:0005524 GO:GO:0005634 GO:GO:0008285 GO:GO:0006355 GO:GO:0008152 GO:GO:0045111 GO:GO:0071564 GO:GO:0071565 ChiTaRS:SMARCA2 InterPro:IPR013999 InterPro:IPR014012 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0016818 EMBL:AL359076 EMBL:AL138755 HGNC:HGNC:11098 GO:GO:0035887 ProteinModelPortal:F6VDE0 Ensembl:ENST00000450198 OrthoDB:EOG7NPFVD NextBio:35510421 ArrayExpress:F6VDE0 Bgee:F6VDE0 Uniprot:F6VDE0) HSP 1 Score: 55.8398 bits (133), Expect = 9.379e-9 Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70 K+Q EA +EKLEKQ ++E ERK RQ+HQE+L +I H +DF+ +H++ K+ K Sbjct: 419 KRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQK 475
BLAST of EMLSAG00000000927 vs. GO
Match: - (symbol:Smarca4 "SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4" species:10090 "Mus musculus" [GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IMP;IDA] [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0000792 "heterochromatin" evidence=IDA] [GO:0000902 "cell morphogenesis" evidence=IMP] [GO:0000977 "RNA polymerase II regulatory region sequence-specific DNA binding" evidence=IDA] [GO:0001105 "RNA polymerase II transcription coactivator activity" evidence=ISO] [GO:0001570 "vasculogenesis" evidence=IMP] [GO:0001701 "in utero embryonic development" evidence=IMP] [GO:0001832 "blastocyst growth" evidence=IMP] [GO:0001835 "blastocyst hatching" evidence=IMP] [GO:0001889 "liver development" evidence=IMP] [GO:0002039 "p53 binding" evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA] [GO:0003713 "transcription coactivator activity" evidence=ISO] [GO:0003714 "transcription corepressor activity" evidence=ISO] [GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005615 "extracellular space" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin" evidence=IDA] [GO:0005726 "perichromatin fibrils" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=ISO;IMP] [GO:0006334 "nucleosome assembly" evidence=TAS] [GO:0006337 "nucleosome disassembly" evidence=ISO] [GO:0006338 "chromatin remodeling" evidence=ISO;IMP] [GO:0006346 "methylation-dependent chromatin silencing" evidence=IDA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0006366 "transcription from RNA polymerase II promoter" evidence=ISO] [GO:0007399 "nervous system development" evidence=IMP] [GO:0007403 "glial cell fate determination" evidence=IMP] [GO:0007507 "heart development" evidence=IMP] [GO:0008094 "DNA-dependent ATPase activity" evidence=ISO] [GO:0008134 "transcription factor binding" evidence=IPI] [GO:0010424 "DNA methylation on cytosine within a CG sequence" evidence=IMP] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA;TAS] [GO:0016568 "chromatin modification" evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IMP;TAS] [GO:0019827 "stem cell maintenance" evidence=IMP] [GO:0022008 "neurogenesis" evidence=IDA] [GO:0030198 "extracellular matrix organization" evidence=IMP] [GO:0030216 "keratinocyte differentiation" evidence=IMP] [GO:0030308 "negative regulation of cell growth" evidence=ISO] [GO:0030900 "forebrain development" evidence=IMP] [GO:0030902 "hindbrain development" evidence=IMP] [GO:0030957 "Tat protein binding" evidence=ISO] [GO:0032403 "protein complex binding" evidence=ISO] [GO:0035116 "embryonic hindlimb morphogenesis" evidence=IMP] [GO:0035887 "aortic smooth muscle cell differentiation" evidence=IMP] [GO:0043044 "ATP-dependent chromatin remodeling" evidence=ISO] [GO:0043388 "positive regulation of DNA binding" evidence=IGI] [GO:0043923 "positive regulation by host of viral transcription" evidence=ISO] [GO:0043966 "histone H3 acetylation" evidence=IMP] [GO:0045892 "negative regulation of transcription, DNA-templated" evidence=ISO] [GO:0045893 "positive regulation of transcription, DNA-templated" evidence=ISO] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IGI;ISO;IMP] [GO:0047485 "protein N-terminus binding" evidence=ISO] [GO:0048562 "embryonic organ morphogenesis" evidence=IMP] [GO:0048730 "epidermis morphogenesis" evidence=IMP] [GO:0050681 "androgen receptor binding" evidence=ISO] [GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=ISO] [GO:0060318 "definitive erythrocyte differentiation" evidence=IMP] [GO:0060347 "heart trabecula formation" evidence=IGI] [GO:0060766 "negative regulation of androgen receptor signaling pathway" evidence=ISO] [GO:0070307 "lens fiber cell development" evidence=IMP] [GO:0070577 "histone acetyl-lysine binding" evidence=ISO] [GO:0071564 "npBAF complex" evidence=ISO;IDA] [GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778 "WINAC complex" evidence=ISO] InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 PROSITE:PS51666 SMART:SM00297 SMART:SM00490 SMART:SM00592 SMART:SM00951 MGI:MGI:88192 InterPro:IPR027417 SUPFAM:SSF52540 GO:GO:0005524 GO:GO:0003714 GO:GO:0030216 GO:GO:0030308 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900 GO:GO:0001889 EMBL:CH466522 GO:GO:0003682 GO:GO:0016887 GO:GO:0006338 GO:GO:0000122 GO:GO:0051091 GO:GO:0006366 GO:GO:0001570 GO:GO:0071564 GO:GO:0016514 GO:GO:0003407 GO:GO:0071565 GO:GO:0000902 GO:GO:0000977 GO:GO:0004386 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902 GO:GO:0006334 GO:GO:0001105 GO:GO:0048730 GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR018359 PROSITE:PS00633 GO:GO:0000792 GO:GO:0060347 GO:GO:0071778 GO:GO:0070307 GO:GO:0043966 GO:GO:0043388 KO:K11647 GeneTree:ENSGT00550000074659 OrthoDB:EOG771265 InterPro:IPR013999 InterPro:IPR014012 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0008094 GO:GO:0001835 GO:GO:0007403 GO:GO:0060766 GO:GO:0006346 GO:GO:0010424 GO:GO:0043923 GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 HOGENOM:HOG000172363 HOVERGEN:HBG056636 TreeFam:TF300785 GO:GO:0035887 CTD:6597 EMBL:AK147285 EMBL:AK160825 EMBL:AK166837 EMBL:BC079560 RefSeq:NP_001167549.1 RefSeq:NP_001167550.1 RefSeq:NP_035547.2 UniGene:Mm.286593 ProteinModelPortal:Q3TKT4 SMR:Q3TKT4 BioGrid:203336 DIP:DIP-40650N DIP:DIP-59249N IntAct:Q3TKT4 MINT:MINT-1958721 STRING:10090.ENSMUSP00000096547 PhosphoSite:Q3TKT4 PaxDb:Q3TKT4 PRIDE:Q3TKT4 Ensembl:ENSMUST00000034707 Ensembl:ENSMUST00000098948 Ensembl:ENSMUST00000174008 GeneID:20586 KEGG:mmu:20586 UCSC:uc009omd.2 UCSC:uc009ome.2 InParanoid:Q3TUD7 NextBio:298883 PRO:PR:Q3TKT4 ArrayExpress:Q3TKT4 Bgee:Q3TKT4 Genevestigator:Q3TKT4 Uniprot:Q3TKT4) HSP 1 Score: 55.8398 bits (133), Expect = 1.052e-8 Identity = 28/57 (49.12%), Postives = 40/57 (70.18%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70 K+Q EA +EKLEKQ ++E ERK RQ+HQE+L +I H +DF+ +H++ KL K Sbjct: 443 KRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFREYHRSVTGKLQK 499
BLAST of EMLSAG00000000927 vs. GO
Match: - (symbol:Smarca4 "Transcription activator BRG1" species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II regulatory region sequence-specific DNA binding" evidence=IEA] [GO:0001105 "RNA polymerase II transcription coactivator activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA] [GO:0001889 "liver development" evidence=IEA] [GO:0002039 "p53 binding" evidence=IEA] [GO:0003407 "neural retina development" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714 "transcription corepressor activity" evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA] [GO:0006337 "nucleosome disassembly" evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0006346 "methylation-dependent chromatin silencing" evidence=IEA] [GO:0007403 "glial cell fate determination" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity" evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG sequence" evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA] [GO:0030198 "extracellular matrix organization" evidence=IEA] [GO:0030216 "keratinocyte differentiation" evidence=IEA] [GO:0030308 "negative regulation of cell growth" evidence=IEA] [GO:0030900 "forebrain development" evidence=IEA] [GO:0030902 "hindbrain development" evidence=IEA] [GO:0030957 "Tat protein binding" evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA] [GO:0035887 "aortic smooth muscle cell differentiation" evidence=IEA] [GO:0043388 "positive regulation of DNA binding" evidence=IEA] [GO:0043923 "positive regulation by host of viral transcription" evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0048562 "embryonic organ morphogenesis" evidence=IEA] [GO:0048730 "epidermis morphogenesis" evidence=IEA] [GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0060318 "definitive erythrocyte differentiation" evidence=IEA] [GO:0060347 "heart trabecula formation" evidence=IEA] [GO:0060766 "negative regulation of androgen receptor signaling pathway" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071778 "WINAC complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 PROSITE:PS51666 SMART:SM00297 SMART:SM00490 SMART:SM00592 SMART:SM00951 RGD:621728 InterPro:IPR027417 SUPFAM:SSF52540 GO:GO:0005524 GO:GO:0003714 GO:GO:0030216 GO:GO:0030308 GO:GO:0006200 GO:GO:0030198 GO:GO:0030900 GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122 GO:GO:0051091 GO:GO:0006366 GO:GO:0001570 GO:GO:0071564 GO:GO:0016514 GO:GO:0003407 GO:GO:0071565 GO:GO:0000902 GO:GO:0000977 GO:GO:0004386 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902 GO:GO:0001105 GO:GO:0048730 GO:GO:0006337 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR018359 PROSITE:PS00633 GO:GO:0000792 GO:GO:0060347 GO:GO:0071778 GO:GO:0043966 GO:GO:0043388 KO:K11647 GeneTree:ENSGT00550000074659 OrthoDB:EOG771265 InterPro:IPR013999 InterPro:IPR014012 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0008094 GO:GO:0001835 GO:GO:0007403 GO:GO:0060766 GO:GO:0006346 GO:GO:0010424 GO:GO:0043923 GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 GO:GO:0035887 CTD:6597 UniGene:Rn.23417 OMA:RGMKYLR EMBL:AABR06053685 RefSeq:NP_599195.1 Ensembl:ENSRNOT00000013165 GeneID:171379 KEGG:rno:171379 NextBio:35583886 ArrayExpress:G3V790 Uniprot:G3V790) HSP 1 Score: 55.8398 bits (133), Expect = 1.102e-8 Identity = 28/57 (49.12%), Postives = 40/57 (70.18%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70 K+Q EA +EKLEKQ ++E ERK RQ+HQE+L +I H +DF+ +H++ KL K Sbjct: 443 KRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFREYHRSVTGKLQK 499
BLAST of EMLSAG00000000927 vs. GO
Match: - (symbol:Smarca4 "Transcription activator BRG1" species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003714 "transcription corepressor activity" evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0007399 "nervous system development" evidence=IEA] [GO:0071564 "npBAF complex" evidence=ISS] [GO:0071565 "nBAF complex" evidence=ISS] InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 PROSITE:PS51666 SMART:SM00297 SMART:SM00490 SMART:SM00592 SMART:SM00951 RGD:621728 InterPro:IPR027417 SUPFAM:SSF52540 GO:GO:0005524 GO:GO:0003714 GO:GO:0007399 GO:GO:0006355 GO:GO:0032403 GO:GO:0003677 GO:GO:0006351 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565 GO:GO:0004386 GO:GO:0043044 GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR018359 PROSITE:PS00633 InterPro:IPR013999 InterPro:IPR014012 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 HOGENOM:HOG000172363 HOVERGEN:HBG056636 EMBL:AJ504723 UniGene:Rn.23417 ProteinModelPortal:Q8K1P7 SMR:Q8K1P7 IntAct:Q8K1P7 PhosphoSite:Q8K1P7 PaxDb:Q8K1P7 PRIDE:Q8K1P7 UCSC:RGD:621728 Genevestigator:Q8K1P7 Uniprot:Q8K1P7) HSP 1 Score: 55.8398 bits (133), Expect = 1.123e-8 Identity = 28/57 (49.12%), Postives = 40/57 (70.18%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70 K+Q EA +EKLEKQ ++E ERK RQ+HQE+L +I H +DF+ +H++ KL K Sbjct: 443 KRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFREYHRSVTGKLQK 499
BLAST of EMLSAG00000000927 vs. GO
Match: - (symbol:Smarca4 "SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4" species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0000792 "heterochromatin" evidence=IEA;ISO] [GO:0000902 "cell morphogenesis" evidence=IEA;ISO] [GO:0000977 "RNA polymerase II regulatory region sequence-specific DNA binding" evidence=IEA;ISO] [GO:0001105 "RNA polymerase II transcription coactivator activity" evidence=IEA;ISO] [GO:0001570 "vasculogenesis" evidence=IEA;ISO] [GO:0001701 "in utero embryonic development" evidence=ISO] [GO:0001832 "blastocyst growth" evidence=IEA;ISO] [GO:0001835 "blastocyst hatching" evidence=IEA;ISO] [GO:0001889 "liver development" evidence=IEA;ISO] [GO:0002039 "p53 binding" evidence=IEA;ISO] [GO:0003407 "neural retina development" evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0003713 "transcription coactivator activity" evidence=ISO] [GO:0003714 "transcription corepressor activity" evidence=IEA;ISO;ISS] [GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005615 "extracellular space" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin" evidence=IEA;ISO] [GO:0005726 "perichromatin fibrils" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO] [GO:0006337 "nucleosome disassembly" evidence=IEA;ISO;IDA] [GO:0006338 "chromatin remodeling" evidence=IEA;ISO] [GO:0006346 "methylation-dependent chromatin silencing" evidence=IEA;ISO] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0007399 "nervous system development" evidence=IEA;ISO] [GO:0007403 "glial cell fate determination" evidence=IEA;ISO] [GO:0007507 "heart development" evidence=ISO] [GO:0008094 "DNA-dependent ATPase activity" evidence=IEA;ISO] [GO:0008134 "transcription factor binding" evidence=ISO] [GO:0010424 "DNA methylation on cytosine within a CG sequence" evidence=IEA;ISO] [GO:0016514 "SWI/SNF complex" evidence=IEA;ISO;IDA] [GO:0016887 "ATPase activity" evidence=ISO] [GO:0019827 "stem cell maintenance" evidence=IEA;ISO] [GO:0022008 "neurogenesis" evidence=ISO] [GO:0030198 "extracellular matrix organization" evidence=IEA;ISO] [GO:0030216 "keratinocyte differentiation" evidence=IEA;ISO] [GO:0030308 "negative regulation of cell growth" evidence=IEA;ISO] [GO:0030900 "forebrain development" evidence=IEA;ISO] [GO:0030902 "hindbrain development" evidence=IEA;ISO] [GO:0030957 "Tat protein binding" evidence=IEA;ISO] [GO:0032403 "protein complex binding" evidence=IDA] [GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA;ISO] [GO:0035887 "aortic smooth muscle cell differentiation" evidence=IEA;ISO] [GO:0043044 "ATP-dependent chromatin remodeling" evidence=IDA] [GO:0043388 "positive regulation of DNA binding" evidence=IEA;ISO] [GO:0043923 "positive regulation by host of viral transcription" evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation" evidence=IEA;ISO] [GO:0045892 "negative regulation of transcription, DNA-templated" evidence=ISO] [GO:0045893 "positive regulation of transcription, DNA-templated" evidence=ISO] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISO] [GO:0047485 "protein N-terminus binding" evidence=IEA;ISO] [GO:0048562 "embryonic organ morphogenesis" evidence=IEA;ISO] [GO:0048730 "epidermis morphogenesis" evidence=IEA;ISO] [GO:0050681 "androgen receptor binding" evidence=IEA;ISO] [GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=IEA;ISO] [GO:0060318 "definitive erythrocyte differentiation" evidence=IEA;ISO] [GO:0060347 "heart trabecula formation" evidence=IEA;ISO] [GO:0060766 "negative regulation of androgen receptor signaling pathway" evidence=IEA;ISO] [GO:0070307 "lens fiber cell development" evidence=ISO] [GO:0070577 "histone acetyl-lysine binding" evidence=IEA;ISO] [GO:0071564 "npBAF complex" evidence=IEA;ISO;ISS] [GO:0071565 "nBAF complex" evidence=IEA;ISO;ISS] [GO:0071778 "WINAC complex" evidence=IEA;ISO] InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 PROSITE:PS51666 SMART:SM00297 SMART:SM00490 SMART:SM00592 SMART:SM00951 RGD:621728 InterPro:IPR027417 SUPFAM:SSF52540 GO:GO:0005524 GO:GO:0003714 GO:GO:0007399 GO:GO:0006355 GO:GO:0032403 GO:GO:0003677 GO:GO:0006351 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565 GO:GO:0004386 GO:GO:0043044 GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR018359 PROSITE:PS00633 InterPro:IPR013999 InterPro:IPR014012 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 HOGENOM:HOG000172363 HOVERGEN:HBG056636 EMBL:AJ504723 UniGene:Rn.23417 ProteinModelPortal:Q8K1P7 SMR:Q8K1P7 IntAct:Q8K1P7 PhosphoSite:Q8K1P7 PaxDb:Q8K1P7 PRIDE:Q8K1P7 UCSC:RGD:621728 Genevestigator:Q8K1P7 Uniprot:Q8K1P7) HSP 1 Score: 55.8398 bits (133), Expect = 1.123e-8 Identity = 28/57 (49.12%), Postives = 40/57 (70.18%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70 K+Q EA +EKLEKQ ++E ERK RQ+HQE+L +I H +DF+ +H++ KL K Sbjct: 443 KRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFREYHRSVTGKLQK 499
BLAST of EMLSAG00000000927 vs. GO
Match: - (symbol:smarca4 "SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4" species:7955 "Danio rerio" [GO:0016818 "hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid anhydrides" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0031101 "fin regeneration" evidence=IMP] [GO:0003407 "neural retina development" evidence=IMP] [GO:0007417 "central nervous system development" evidence=IMP] [GO:0014032 "neural crest cell development" evidence=IMP] [GO:0060059 "embryonic retina morphogenesis in camera-type eye" evidence=IMP] [GO:0010842 "retina layer formation" evidence=IMP] [GO:0021634 "optic nerve formation" evidence=IMP] [GO:0030182 "neuron differentiation" evidence=IMP] [GO:0060973 "cell migration involved in heart development" evidence=IMP] [GO:0001947 "heart looping" evidence=IMP] [GO:0060038 "cardiac muscle cell proliferation" evidence=IMP] [GO:0048596 "embryonic camera-type eye morphogenesis" evidence=IMP] [GO:0000185 "activation of MAPKKK activity" evidence=IMP] InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 PROSITE:PS51666 SMART:SM00297 SMART:SM00490 SMART:SM00592 SMART:SM00951 ZFIN:ZDB-GENE-030605-1 InterPro:IPR027417 SUPFAM:SSF52540 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0030182 GO:GO:0008152 GO:GO:0003677 GO:GO:0007417 GO:GO:0004386 GO:GO:0001947 GO:GO:0010842 GO:GO:0014032 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR018359 PROSITE:PS00633 GO:GO:0031101 GO:GO:0060038 GO:GO:0048596 KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0060059 GO:GO:0000185 HOGENOM:HOG000172363 HOVERGEN:HBG056636 TreeFam:TF300785 CTD:6597 OMA:RGMKYLR GO:GO:0060973 GO:GO:0021634 EMBL:BX322663 EMBL:BC163918 EMBL:BC163920 EMBL:AY205256 EMBL:AY218841 RefSeq:NP_853634.1 RefSeq:XP_005163923.1 UniGene:Dr.2414 STRING:7955.ENSDARP00000008610 Ensembl:ENSDART00000115110 Ensembl:ENSDART00000134514 GeneID:353295 KEGG:dre:353295 InParanoid:Q7ZSY3 NextBio:20812727 Uniprot:Q7ZSY3) HSP 1 Score: 55.8398 bits (133), Expect = 1.188e-8 Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70 K+Q EA +EKLEKQ ++E ERK RQ+HQE+L +I H +DF+ +H++ K+ K Sbjct: 461 KRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSITAKMQK 517
BLAST of EMLSAG00000000927 vs. GO
Match: - (symbol:SMARCA4 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II regulatory region sequence-specific DNA binding" evidence=IEA] [GO:0001105 "RNA polymerase II transcription coactivator activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA] [GO:0001889 "liver development" evidence=IEA] [GO:0002039 "p53 binding" evidence=IEA] [GO:0003407 "neural retina development" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714 "transcription corepressor activity" evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA] [GO:0006337 "nucleosome disassembly" evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0006346 "methylation-dependent chromatin silencing" evidence=IEA] [GO:0007403 "glial cell fate determination" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity" evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG sequence" evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA] [GO:0030198 "extracellular matrix organization" evidence=IEA] [GO:0030216 "keratinocyte differentiation" evidence=IEA] [GO:0030308 "negative regulation of cell growth" evidence=IEA] [GO:0030900 "forebrain development" evidence=IEA] [GO:0030902 "hindbrain development" evidence=IEA] [GO:0030957 "Tat protein binding" evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA] [GO:0035887 "aortic smooth muscle cell differentiation" evidence=IEA] [GO:0043388 "positive regulation of DNA binding" evidence=IEA] [GO:0043923 "positive regulation by host of viral transcription" evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0048562 "embryonic organ morphogenesis" evidence=IEA] [GO:0048730 "epidermis morphogenesis" evidence=IEA] [GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0060318 "definitive erythrocyte differentiation" evidence=IEA] [GO:0060347 "heart trabecula formation" evidence=IEA] [GO:0060766 "negative regulation of androgen receptor signaling pathway" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071778 "WINAC complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 PROSITE:PS51666 SMART:SM00297 SMART:SM00490 SMART:SM00592 SMART:SM00951 InterPro:IPR027417 SUPFAM:SSF52540 GO:GO:0005524 GO:GO:0003714 GO:GO:0030216 GO:GO:0030308 GO:GO:0006200 GO:GO:0030198 GO:GO:0030900 GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122 GO:GO:0051091 GO:GO:0006366 GO:GO:0001570 GO:GO:0071564 GO:GO:0016514 GO:GO:0003407 GO:GO:0071565 GO:GO:0000902 GO:GO:0000977 GO:GO:0004386 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902 GO:GO:0001105 GO:GO:0048730 GO:GO:0006337 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR018359 PROSITE:PS00633 GO:GO:0000792 GO:GO:0060347 GO:GO:0071778 GO:GO:0043966 GO:GO:0043388 GeneTree:ENSGT00550000074659 OrthoDB:EOG771265 InterPro:IPR013999 InterPro:IPR014012 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0008094 GO:GO:0001835 GO:GO:0007403 GO:GO:0060766 GO:GO:0006346 GO:GO:0010424 GO:GO:0043923 GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 TreeFam:TF300785 GO:GO:0035887 OMA:RGMKYLR EMBL:AAEX03012414 Ensembl:ENSCAFT00000027907 Uniprot:E2RJ89) HSP 1 Score: 55.4546 bits (132), Expect = 1.688e-8 Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70 K+Q EA +EKLEKQ ++E ERK RQ+HQE+L +I H +DF+ +H++ K+ K Sbjct: 443 KRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQK 499
BLAST of EMLSAG00000000927 vs. GO
Match: - (symbol:SMARCA4 "Transcription activator BRG1" species:9913 "Bos taurus" [GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II regulatory region sequence-specific DNA binding" evidence=IEA] [GO:0001105 "RNA polymerase II transcription coactivator activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA] [GO:0001889 "liver development" evidence=IEA] [GO:0002039 "p53 binding" evidence=IEA] [GO:0003407 "neural retina development" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714 "transcription corepressor activity" evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA] [GO:0006337 "nucleosome disassembly" evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0006346 "methylation-dependent chromatin silencing" evidence=IEA] [GO:0007403 "glial cell fate determination" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity" evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG sequence" evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA] [GO:0030198 "extracellular matrix organization" evidence=IEA] [GO:0030216 "keratinocyte differentiation" evidence=IEA] [GO:0030308 "negative regulation of cell growth" evidence=IEA] [GO:0030900 "forebrain development" evidence=IEA] [GO:0030902 "hindbrain development" evidence=IEA] [GO:0030957 "Tat protein binding" evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA] [GO:0035887 "aortic smooth muscle cell differentiation" evidence=IEA] [GO:0043388 "positive regulation of DNA binding" evidence=IEA] [GO:0043923 "positive regulation by host of viral transcription" evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0048562 "embryonic organ morphogenesis" evidence=IEA] [GO:0048730 "epidermis morphogenesis" evidence=IEA] [GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0060318 "definitive erythrocyte differentiation" evidence=IEA] [GO:0060347 "heart trabecula formation" evidence=IEA] [GO:0060766 "negative regulation of androgen receptor signaling pathway" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071778 "WINAC complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 PROSITE:PS51666 SMART:SM00297 SMART:SM00490 SMART:SM00592 SMART:SM00951 InterPro:IPR027417 SUPFAM:SSF52540 GO:GO:0005524 GO:GO:0003714 GO:GO:0030216 GO:GO:0030308 GO:GO:0006200 GO:GO:0030198 GO:GO:0030900 GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122 GO:GO:0051091 GO:GO:0006366 GO:GO:0001570 GO:GO:0071564 GO:GO:0016514 GO:GO:0003407 GO:GO:0071565 GO:GO:0000902 GO:GO:0000977 GO:GO:0004386 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902 GO:GO:0001105 GO:GO:0048730 GO:GO:0006337 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR018359 PROSITE:PS00633 GO:GO:0000792 GO:GO:0060347 GO:GO:0071778 GO:GO:0043966 GO:GO:0043388 GeneTree:ENSGT00550000074659 OrthoDB:EOG771265 InterPro:IPR013999 InterPro:IPR014012 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0008094 GO:GO:0001835 GO:GO:0007403 GO:GO:0060766 GO:GO:0006346 GO:GO:0010424 GO:GO:0043923 GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 TreeFam:TF300785 GO:GO:0035887 OMA:RGMKYLR EMBL:DAAA02019479 EMBL:DAAA02019480 EMBL:DAAA02019481 Ensembl:ENSBTAT00000025598 ArrayExpress:F1MJ46 Uniprot:F1MJ46) HSP 1 Score: 55.4546 bits (132), Expect = 1.702e-8 Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70 K+Q EA +EKLEKQ ++E ERK RQ+HQE+L +I H +DF+ +H++ K+ K Sbjct: 435 KRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQK 491
BLAST of EMLSAG00000000927 vs. C. finmarchicus
Match: gi|592890136|gb|GAXK01068239.1| (TSA: Calanus finmarchicus comp17614_c0_seq2 transcribed RNA sequence) HSP 1 Score: 50.8322 bits (120), Expect = 1.923e-7 Identity = 23/47 (48.94%), Postives = 34/47 (72.34%), Query Frame = 0 Query: 24 SEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70 +E+LEKQ RVE+ERK R +H E++ + +H R+ Q +HKNN K+ K Sbjct: 1468 TERLEKQQRVESERKRRAKHSEYINAVLTHSREMQAWHKNNVQKVQK 1608
BLAST of EMLSAG00000000927 vs. C. finmarchicus
Match: gi|592890137|gb|GAXK01068238.1| (TSA: Calanus finmarchicus comp17614_c0_seq1 transcribed RNA sequence) HSP 1 Score: 50.8322 bits (120), Expect = 1.991e-7 Identity = 23/47 (48.94%), Postives = 34/47 (72.34%), Query Frame = 0 Query: 24 SEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70 +E+LEKQ RVE+ERK R +H E++ + +H R+ Q +HKNN K+ K Sbjct: 1468 TERLEKQQRVESERKRRAKHSEYINAVLTHSREMQAWHKNNVQKVQK 1608
BLAST of EMLSAG00000000927 vs. C. finmarchicus
Match: gi|592890132|gb|GAXK01068243.1| (TSA: Calanus finmarchicus comp17614_c1_seq1 transcribed RNA sequence) HSP 1 Score: 50.447 bits (119), Expect = 2.070e-7 Identity = 23/47 (48.94%), Postives = 34/47 (72.34%), Query Frame = 0 Query: 24 SEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70 +E+LEKQ RVE+ERK R +H E++ + +H R+ Q +HKNN K+ K Sbjct: 3290 TERLEKQQRVESERKRRAKHSEYINAVLTHSREMQAWHKNNVQKVQK 3430
BLAST of EMLSAG00000000927 vs. L. salmonis peptides
Match: EMLSAP00000000927 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1161:15715:16165:-1 gene:EMLSAG00000000927 transcript:EMLSAT00000000927 description:"maker-LSalAtl2s1161-snap-gene-0.17") HSP 1 Score: 193.741 bits (491), Expect = 4.527e-65 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0 Query: 1 MGVACPPPSEGAEKKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLKTMPRKSRKKRQRDLKKRDQEPLW 93 MGVACPPPSEGAEKKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLKTMPRKSRKKRQRDLKKRDQEPLW Sbjct: 1 MGVACPPPSEGAEKKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLKTMPRKSRKKRQRDLKKRDQEPLW 93
BLAST of EMLSAG00000000927 vs. L. salmonis peptides
Match: EMLSAP00000009416 (pep:novel supercontig:LSalAtl2s:LSalAtl2s600:248324:253025:1 gene:EMLSAG00000009416 transcript:EMLSAT00000009416 description:"maker-LSalAtl2s600-snap-gene-2.21") HSP 1 Score: 85.8853 bits (211), Expect = 1.394e-20 Identity = 43/58 (74.14%), Postives = 47/58 (81.03%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLKT 71 K+QG EA +EKLEKQ R EAERK RQRHQE+L I SH RDFQ+FHKNNQMKLLKT Sbjct: 137 KRQGLREARATEKLEKQQRXEAERKRRQRHQEYLNAILSHARDFQNFHKNNQMKLLKT 194
BLAST of EMLSAG00000000927 vs. SwissProt
Match: gi|19857556|sp|P25439.2|BRM_DROME (RecName: Full=ATP-dependent helicase brm; AltName: Full=Homeotic gene regulator; AltName: Full=Protein brahma) HSP 1 Score: 60.077 bits (144), Expect = 5.664e-11 Identity = 29/55 (52.73%), Postives = 40/55 (72.73%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68 K+QG EA +EKLEKQ ++EAERK RQ+H EFL + H +D + FH+NN+ +L Sbjct: 484 KRQGLREARATEKLEKQQKLEAERKRRQKHLEFLAAVLQHGKDLREFHRNNKAQL 538
BLAST of EMLSAG00000000927 vs. SwissProt
Match: gi|123790047|sp|Q3TKT4.1|SMCA4_MOUSE (RecName: Full=Transcription activator BRG1; AltName: Full=ATP-dependent helicase SMARCA4; AltName: Full=BRG1-associated factor 190A; Short=BAF190A; AltName: Full=Protein brahma homolog 1; AltName: Full=SNF2-beta; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4) HSP 1 Score: 55.8398 bits (133), Expect = 1.701e-9 Identity = 28/57 (49.12%), Postives = 40/57 (70.18%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70 K+Q EA +EKLEKQ ++E ERK RQ+HQE+L +I H +DF+ +H++ KL K Sbjct: 443 KRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFREYHRSVTGKLQK 499
BLAST of EMLSAG00000000927 vs. SwissProt
Match: gi|81914599|sp|Q8K1P7.1|SMCA4_RAT (RecName: Full=Transcription activator BRG1; AltName: Full=ATP-dependent helicase SMARCA4; AltName: Full=BRG1-associated factor 190A; Short=BAF190A; AltName: Full=Protein brahma homolog 1; AltName: Full=SNF2-beta; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4) HSP 1 Score: 55.8398 bits (133), Expect = 1.822e-9 Identity = 28/57 (49.12%), Postives = 40/57 (70.18%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70 K+Q EA +EKLEKQ ++E ERK RQ+HQE+L +I H +DF+ +H++ KL K Sbjct: 443 KRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFREYHRSVTGKLQK 499
BLAST of EMLSAG00000000927 vs. SwissProt
Match: gi|288559138|sp|A7Z019.1|SMCA4_BOVIN (RecName: Full=Transcription activator BRG1; AltName: Full=ATP-dependent helicase SMARCA4; AltName: Full=BRG1-associated factor 190A; Short=BAF190A; AltName: Full=Protein brahma homolog 1; AltName: Full=SNF2-beta; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4) HSP 1 Score: 55.4546 bits (132), Expect = 2.825e-9 Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70 K+Q EA +EKLEKQ ++E ERK RQ+HQE+L +I H +DF+ +H++ K+ K Sbjct: 435 KRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQK 491
BLAST of EMLSAG00000000927 vs. SwissProt
Match: gi|116242792|sp|P51532.2|SMCA4_HUMAN (RecName: Full=Transcription activator BRG1; AltName: Full=ATP-dependent helicase SMARCA4; AltName: Full=BRG1-associated factor 190A; Short=BAF190A; AltName: Full=Mitotic growth and transcription activator; AltName: Full=Protein BRG-1; AltName: Full=Protein brahma homolog 1; AltName: Full=SNF2-beta; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4) HSP 1 Score: 55.0694 bits (131), Expect = 3.178e-9 Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70 K+Q EA +EKLEKQ ++E ERK RQ+HQE+L +I H +DF+ +H++ K+ K Sbjct: 443 KRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQK 499
BLAST of EMLSAG00000000927 vs. SwissProt
Match: gi|81884744|sp|Q6DIC0.1|SMCA2_MOUSE (RecName: Full=Probable global transcription activator SNF2L2; AltName: Full=ATP-dependent helicase SMARCA2; AltName: Full=BRG1-associated factor 190B; Short=BAF190B; AltName: Full=Protein brahma homolog; AltName: Full=SNF2-alpha; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2) HSP 1 Score: 54.299 bits (129), Expect = 5.925e-9 Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70 K+Q EA +EKLEKQ ++E ERK RQ+HQE+L +I H +DF+ +H++ K+ K Sbjct: 424 KRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQK 480
BLAST of EMLSAG00000000927 vs. SwissProt
Match: gi|212276472|sp|P51531.2|SMCA2_HUMAN (RecName: Full=Probable global transcription activator SNF2L2; AltName: Full=ATP-dependent helicase SMARCA2; AltName: Full=BRG1-associated factor 190B; Short=BAF190B; AltName: Full=Protein brahma homolog; Short=hBRM; AltName: Full=SNF2-alpha; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2) HSP 1 Score: 54.299 bits (129), Expect = 6.534e-9 Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70 K+Q EA +EKLEKQ ++E ERK RQ+HQE+L +I H +DF+ +H++ K+ K Sbjct: 419 KRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQK 475
BLAST of EMLSAG00000000927 vs. Select Arthropod Genomes
Match: gb|EEZ97706.2| (brahma [Tribolium castaneum]) HSP 1 Score: 68.9366 bits (167), Expect = 2.056e-14 Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68 K+QG EA +EKLEKQ ++EAERK RQ+HQEFL ++ H +DF+ FH+NNQ KL Sbjct: 264 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLTSVLQHGKDFKEFHRNNQAKL 318
BLAST of EMLSAG00000000927 vs. Select Arthropod Genomes
Match: gb|KYB25021.1| (brahma [Tribolium castaneum]) HSP 1 Score: 68.9366 bits (167), Expect = 2.056e-14 Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68 K+QG EA +EKLEKQ ++EAERK RQ+HQEFL ++ H +DF+ FH+NNQ KL Sbjct: 264 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLTSVLQHGKDFKEFHRNNQAKL 318
BLAST of EMLSAG00000000927 vs. Select Arthropod Genomes
Match: gb|KYB25022.1| (brahma [Tribolium castaneum]) HSP 1 Score: 68.9366 bits (167), Expect = 2.264e-14 Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68 K+QG EA +EKLEKQ ++EAERK RQ+HQEFL ++ H +DF+ FH+NNQ KL Sbjct: 217 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLTSVLQHGKDFKEFHRNNQAKL 271
BLAST of EMLSAG00000000927 vs. Select Arthropod Genomes
Match: gb|KYB25018.1| (brahma [Tribolium castaneum]) HSP 1 Score: 68.9366 bits (167), Expect = 2.635e-14 Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68 K+QG EA +EKLEKQ ++EAERK RQ+HQEFL ++ H +DF+ FH+NNQ KL Sbjct: 487 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLTSVLQHGKDFKEFHRNNQAKL 541
BLAST of EMLSAG00000000927 vs. Select Arthropod Genomes
Match: XP_016773027.1 (PREDICTED: ATP-dependent helicase brm [Apis mellifera]) HSP 1 Score: 66.2402 bits (160), Expect = 1.878e-13 Identity = 32/55 (58.18%), Postives = 42/55 (76.36%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68 K+QG EA +EKLEKQ ++EAERK RQ+HQEFL ++ H +DF+ FH+NN KL Sbjct: 914 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLSSVLQHGKDFKEFHRNNVAKL 968
BLAST of EMLSAG00000000927 vs. Select Arthropod Genomes
Match: EAA07201.4 (AGAP010462-PA, partial [Anopheles gambiae str. PEST]) HSP 1 Score: 64.6994 bits (156), Expect = 6.621e-13 Identity = 31/55 (56.36%), Postives = 42/55 (76.36%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68 K+QG EA +EKLEKQ ++EAERK RQ+HQEFL ++ H +DF+ +H+NN KL Sbjct: 492 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLASVLQHGKDFKEYHRNNIAKL 546
BLAST of EMLSAG00000000927 vs. Select Arthropod Genomes
Match: EFX72834.1 (hypothetical protein DAPPUDRAFT_215757 [Daphnia pulex]) HSP 1 Score: 62.7734 bits (151), Expect = 3.032e-12 Identity = 29/58 (50.00%), Postives = 42/58 (72.41%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLKT 71 KKQG EA +EKLEKQ ++EAER+ RQ+HQE+L + H +D + FH+NN K+++ Sbjct: 440 KKQGLREARATEKLEKQQKMEAERRRRQKHQEYLTAVLQHGKDLKEFHRNNLAKIVRI 497
BLAST of EMLSAG00000000927 vs. Select Arthropod Genomes
Match: EEB11322.1 (conserved hypothetical protein [Pediculus humanus corporis]) HSP 1 Score: 61.2326 bits (147), Expect = 1.053e-11 Identity = 29/54 (53.70%), Postives = 39/54 (72.22%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMK 67 K+QG EA +EKLEKQ + EAERK RQ+HQE+L + H +DF+ +H+NN K Sbjct: 365 KRQGLREARATEKLEKQQKFEAERKRRQKHQEYLAAVLQHSKDFKEYHRNNLAK 418
BLAST of EMLSAG00000000927 vs. Select Arthropod Genomes
Match: AAN11774.1 (brahma, isoform D [Drosophila melanogaster]) HSP 1 Score: 60.077 bits (144), Expect = 2.666e-11 Identity = 29/55 (52.73%), Postives = 40/55 (72.73%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68 K+QG EA +EKLEKQ ++EAERK RQ+H EFL + H +D + FH+NN+ +L Sbjct: 480 KRQGLREARATEKLEKQQKLEAERKRRQKHLEFLAAVLQHGKDLREFHRNNKAQL 534
BLAST of EMLSAG00000000927 vs. Select Arthropod Genomes
Match: AAN11773.1 (brahma, isoform C [Drosophila melanogaster]) HSP 1 Score: 60.077 bits (144), Expect = 2.666e-11 Identity = 29/55 (52.73%), Postives = 40/55 (72.73%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68 K+QG EA +EKLEKQ ++EAERK RQ+H EFL + H +D + FH+NN+ +L Sbjct: 480 KRQGLREARATEKLEKQQKLEAERKRRQKHLEFLAAVLQHGKDLREFHRNNKAQL 534
BLAST of EMLSAG00000000927 vs. nr
Match: gi|1073535903|gb|JAT85063.1| (hypothetical protein g.8451, partial [Pectinophora gossypiella]) HSP 1 Score: 70.4774 bits (171), Expect = 1.307e-12 Identity = 33/55 (60.00%), Postives = 42/55 (76.36%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68 K+QG EA +EKLEKQ ++EAERK RQ+HQEFL T+ H +DF+ FH+NN KL Sbjct: 101 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLQTVLQHAKDFKEFHRNNVSKL 155
BLAST of EMLSAG00000000927 vs. nr
Match: gi|1133425729|ref|XP_019868655.1| (PREDICTED: LOW QUALITY PROTEIN: ATP-dependent helicase brm-like [Aethina tumida]) HSP 1 Score: 69.3218 bits (168), Expect = 7.757e-12 Identity = 33/57 (57.89%), Postives = 45/57 (78.95%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70 K+QG EA +EKLEKQ ++EAERK RQ+HQEFL ++ H +DF+ FH+NNQ KL++ Sbjct: 391 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLTSVLQHGKDFKDFHRNNQAKLVR 447
BLAST of EMLSAG00000000927 vs. nr
Match: gi|1004395637|gb|EEZ97706.2| (brahma [Tribolium castaneum]) HSP 1 Score: 68.9366 bits (167), Expect = 1.006e-11 Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68 K+QG EA +EKLEKQ ++EAERK RQ+HQEFL ++ H +DF+ FH+NNQ KL Sbjct: 264 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLTSVLQHGKDFKEFHRNNQAKL 318
BLAST of EMLSAG00000000927 vs. nr
Match: gi|1004395636|gb|KYB25021.1| (brahma [Tribolium castaneum]) HSP 1 Score: 68.9366 bits (167), Expect = 1.006e-11 Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68 K+QG EA +EKLEKQ ++EAERK RQ+HQEFL ++ H +DF+ FH+NNQ KL Sbjct: 264 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLTSVLQHGKDFKEFHRNNQAKL 318
BLAST of EMLSAG00000000927 vs. nr
Match: gi|1004395638|gb|KYB25022.1| (brahma [Tribolium castaneum]) HSP 1 Score: 68.9366 bits (167), Expect = 1.108e-11 Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68 K+QG EA +EKLEKQ ++EAERK RQ+HQEFL ++ H +DF+ FH+NNQ KL Sbjct: 217 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLTSVLQHGKDFKEFHRNNQAKL 271
BLAST of EMLSAG00000000927 vs. nr
Match: gi|642937367|ref|XP_008198808.1| (PREDICTED: ATP-dependent helicase brm isoform X2 [Tribolium castaneum] >gi|1004395633|gb|KYB25018.1| brahma [Tribolium castaneum]) HSP 1 Score: 68.9366 bits (167), Expect = 1.289e-11 Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68 K+QG EA +EKLEKQ ++EAERK RQ+HQEFL ++ H +DF+ FH+NNQ KL Sbjct: 487 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLTSVLQHGKDFKEFHRNNQAKL 541
BLAST of EMLSAG00000000927 vs. nr
Match: gi|642937363|ref|XP_008198806.1| (PREDICTED: ATP-dependent helicase brm isoform X1 [Tribolium castaneum] >gi|642937365|ref|XP_008198807.1| PREDICTED: ATP-dependent helicase brm isoform X1 [Tribolium castaneum]) HSP 1 Score: 68.9366 bits (167), Expect = 1.289e-11 Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68 K+QG EA +EKLEKQ ++EAERK RQ+HQEFL ++ H +DF+ FH+NNQ KL Sbjct: 487 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLTSVLQHGKDFKEFHRNNQAKL 541
BLAST of EMLSAG00000000927 vs. nr
Match: gi|642937369|ref|XP_008198809.1| (PREDICTED: ATP-dependent helicase brm isoform X3 [Tribolium castaneum]) HSP 1 Score: 68.5514 bits (166), Expect = 1.393e-11 Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68 K+QG EA +EKLEKQ ++EAERK RQ+HQEFL ++ H +DF+ FH+NNQ KL Sbjct: 440 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLTSVLQHGKDFKEFHRNNQAKL 494
BLAST of EMLSAG00000000927 vs. nr
Match: gi|1041531429|ref|XP_017301764.1| (PREDICTED: ATP-dependent helicase brm [Diaphorina citri]) HSP 1 Score: 68.5514 bits (166), Expect = 1.514e-11 Identity = 30/57 (52.63%), Postives = 45/57 (78.95%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70 K+QG EA +EKLEKQ +VEAERK RQ+HQE++ T+ H +DF+ +H+NNQ ++++ Sbjct: 280 KRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIMR 336
BLAST of EMLSAG00000000927 vs. nr
Match: gi|930665571|gb|KPJ06699.1| (ATP-dependent helicase brm [Papilio machaon]) HSP 1 Score: 67.781 bits (164), Expect = 2.896e-11 Identity = 32/55 (58.18%), Postives = 42/55 (76.36%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68 K+QG EA +EKLEKQ ++EAERK RQ+HQEFL T+ H +DF+ +H+NN KL Sbjct: 523 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLQTVLQHAKDFKEYHRNNVAKL 577
BLAST of EMLSAG00000000927 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold495_size155559-snap-gene-0.32 (protein:Tk09239 transcript:maker-scaffold495_size155559-snap-gene-0.32-mRNA-1 annotation:"homeotic gene") HSP 1 Score: 66.2402 bits (160), Expect = 1.592e-14 Identity = 32/57 (56.14%), Postives = 43/57 (75.44%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70 K+QG EA +EKLEKQ R+EAER+ RQ+HQE+L + +H RD Q+FH+NN K+ K Sbjct: 323 KRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQK 379 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000927 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 24
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BLAST of EMLSAG00000000927 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 3
BLAST of EMLSAG00000000927 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 2
BLAST of EMLSAG00000000927 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 7
BLAST of EMLSAG00000000927 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 17
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BLAST of EMLSAG00000000927 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
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BLAST of EMLSAG00000000927 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1161:15715..16165- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000927-683693 ID=EMLSAG00000000927-683693|Name=EMLSAG00000000927|organism=Lepeophtheirus salmonis|type=gene|length=451bp|location=Sequence derived from alignment at LSalAtl2s1161:15715..16165- (Lepeophtheirus salmonis)back to top Add to Basket
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