EMLSAG00000000927, EMLSAG00000000927-683693 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000927 vs. GO
Match: - (symbol:SMARCA2 "Probable global transcription activator SNF2L2" species:9606 "Homo sapiens" [GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=TAS] [GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0001105 "RNA polymerase II transcription coactivator activity" evidence=IDA] [GO:0003713 "transcription coactivator activity" evidence=TAS] [GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0006338 "chromatin remodeling" evidence=TAS] [GO:0006355 "regulation of transcription, DNA-templated" evidence=TAS] [GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=TAS] [GO:0007399 "nervous system development" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity" evidence=TAS] [GO:0008285 "negative regulation of cell proliferation" evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IDA] [GO:0030308 "negative regulation of cell growth" evidence=IMP] [GO:0035887 "aortic smooth muscle cell differentiation" evidence=IEA] [GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA] [GO:0044212 "transcription regulatory region DNA binding" evidence=IDA] [GO:0045111 "intermediate filament cytoskeleton" evidence=IDA] [GO:0045892 "negative regulation of transcription, DNA-templated" evidence=IDA] [GO:0045893 "positive regulation of transcription, DNA-templated" evidence=IMP;IDA] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IDA;TAS] [GO:0071564 "npBAF complex" evidence=ISS] [GO:0071565 "nBAF complex" evidence=ISS] [GO:0071778 "WINAC complex" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 PROSITE:PS51666 SMART:SM00297 SMART:SM00490 SMART:SM00592 SMART:SM00951 InterPro:IPR027417 SUPFAM:SSF52540 GO:GO:0005524 GO:GO:0008285 GO:GO:0007399 GO:GO:0005654 GO:GO:0030308 GO:GO:0044212 GO:GO:0006338 GO:GO:0000122 GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565 EMBL:CH471071 GO:GO:0004386 GO:GO:0001105 Orphanet:3051 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR018359 PROSITE:PS00633 GO:GO:0071778 KO:K11647 ChiTaRS:SMARCA2 InterPro:IPR013999 InterPro:IPR014012 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0008094 EMBL:X72889 EMBL:D26155 EMBL:AL359076 EMBL:AL138755 PIR:S39580 PIR:S45251 RefSeq:NP_003061.3 RefSeq:NP_620614.2 RefSeq:XP_005251615.1 UniGene:Hs.298990 PDB:2DAT PDBsum:2DAT ProteinModelPortal:P51531 SMR:P51531 BioGrid:112479 DIP:DIP-29005N IntAct:P51531 MINT:MINT-1898892 STRING:9606.ENSP00000265773 ChEMBL:CHEMBL2362979 PhosphoSite:P51531 DMDM:212276472 PaxDb:P51531 PRIDE:P51531 DNASU:6595 Ensembl:ENST00000349721 Ensembl:ENST00000357248 Ensembl:ENST00000382194 Ensembl:ENST00000382203 GeneID:6595 KEGG:hsa:6595 UCSC:uc003zhc.3 UCSC:uc003zhd.3 CTD:6595 GeneCards:GC09P002005 HGNC:HGNC:11098 HPA:CAB037276 HPA:HPA029981 MIM:600014 MIM:601358 neXtProt:NX_P51531 PharmGKB:PA35948 HOGENOM:HOG000172363 HOVERGEN:HBG056636 InParanoid:P51531 OMA:INYKDRC PhylomeDB:P51531 TreeFam:TF300785 EvolutionaryTrace:P51531 GeneWiki:SMARCA2 GenomeRNAi:6595 NextBio:25649 PMAP-CutDB:P51531 PRO:PR:P51531 ArrayExpress:P51531 Bgee:P51531 CleanEx:HS_SMARCA2 Genevestigator:P51531 GO:GO:0035887 Uniprot:P51531) HSP 1 Score: 54.299 bits (129), Expect = 3.764e-8 Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70 K+Q EA +EKLEKQ ++E ERK RQ+HQE+L +I H +DF+ +H++ K+ K Sbjct: 419 KRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQK 475
BLAST of EMLSAG00000000927 vs. GO
Match: - (symbol:E1C2F7 "Uncharacterized protein" species:9031 "Gallus gallus" [GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0001105 "RNA polymerase II transcription coactivator activity" evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008285 "negative regulation of cell proliferation" evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IEA] [GO:0030308 "negative regulation of cell growth" evidence=IEA] [GO:0035887 "aortic smooth muscle cell differentiation" evidence=IEA] [GO:0044212 "transcription regulatory region DNA binding" evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton" evidence=IEA] [GO:0045892 "negative regulation of transcription, DNA-templated" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071778 "WINAC complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 PROSITE:PS51666 SMART:SM00297 SMART:SM00490 SMART:SM00592 SMART:SM00951 InterPro:IPR027417 SUPFAM:SSF52540 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0008152 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR018359 PROSITE:PS00633 GeneTree:ENSGT00550000074659 OrthoDB:EOG771265 InterPro:IPR013999 InterPro:IPR014012 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 TreeFam:TF300785 EMBL:AC188951 Ensembl:ENSGALT00000016528 PRO:PR:E1C2F7 Uniprot:E1C2F7) HSP 1 Score: 54.299 bits (129), Expect = 3.854e-8 Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70 K+Q EA +EKLEKQ ++E ERK RQ+HQE+L +I H +DF+ +H++ K+ K Sbjct: 368 KRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQK 424
BLAST of EMLSAG00000000927 vs. GO
Match: - (symbol:swsn-4 species:6239 "Caenorhabditis elegans" [GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia development" evidence=IMP] InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 PROSITE:PS51666 SMART:SM00297 SMART:SM00490 SMART:SM00592 SMART:SM00951 InterPro:IPR027417 SUPFAM:SSF52540 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0008152 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR018359 PROSITE:PS00633 KO:K11647 GeneTree:ENSGT00550000074659 OrthoDB:EOG771265 InterPro:IPR013999 InterPro:IPR014012 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 EMBL:Z68751 EMBL:Z68341 EMBL:AF230280 PIR:T20488 RefSeq:NP_502082.1 UniGene:Cel.23435 EnsemblMetazoa:F01G4.1 GeneID:178015 KEGG:cel:CELE_F01G4.1 CTD:178015 WormBase:F01G4.1 OMA:PDDEMIN NextBio:899366 Uniprot:G5EF53) HSP 1 Score: 53.9138 bits (128), Expect = 4.771e-8 Identity = 27/71 (38.03%), Postives = 44/71 (61.97%), Query Frame = 0 Query: 1 MGVACPPPSEGAEKKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLKT 71 + A P + K+Q EA +EKLEKQ ++E ERK RQ+H + + I H ++F+ +H+NN +K+ K+ Sbjct: 242 LETALNPYAYRRTKRQSLREARVTEKLEKQQKMEQERKRRQKHTDLMQAIIQHGKEFKEYHRNNLLKMAKS 312
BLAST of EMLSAG00000000927 vs. GO
Match: - (symbol:swsn-4 "SWI2/SNF2-like protein" species:6239 "Caenorhabditis elegans" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 PROSITE:PS51666 SMART:SM00297 SMART:SM00490 SMART:SM00592 SMART:SM00951 InterPro:IPR027417 SUPFAM:SSF52540 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0008152 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR018359 PROSITE:PS00633 KO:K11647 GeneTree:ENSGT00550000074659 OrthoDB:EOG771265 InterPro:IPR013999 InterPro:IPR014012 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 EMBL:Z68751 EMBL:Z68341 EMBL:AF230280 PIR:T20488 RefSeq:NP_502082.1 UniGene:Cel.23435 EnsemblMetazoa:F01G4.1 GeneID:178015 KEGG:cel:CELE_F01G4.1 CTD:178015 WormBase:F01G4.1 OMA:PDDEMIN NextBio:899366 Uniprot:G5EF53) HSP 1 Score: 53.9138 bits (128), Expect = 4.771e-8 Identity = 27/71 (38.03%), Postives = 44/71 (61.97%), Query Frame = 0 Query: 1 MGVACPPPSEGAEKKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLKT 71 + A P + K+Q EA +EKLEKQ ++E ERK RQ+H + + I H ++F+ +H+NN +K+ K+ Sbjct: 242 LETALNPYAYRRTKRQSLREARVTEKLEKQQKMEQERKRRQKHTDLMQAIIQHGKEFKEYHRNNLLKMAKS 312
BLAST of EMLSAG00000000927 vs. C. finmarchicus
Match: gi|592890136|gb|GAXK01068239.1| (TSA: Calanus finmarchicus comp17614_c0_seq2 transcribed RNA sequence) HSP 1 Score: 50.8322 bits (120), Expect = 1.923e-7 Identity = 23/47 (48.94%), Postives = 34/47 (72.34%), Query Frame = 0 Query: 24 SEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70 +E+LEKQ RVE+ERK R +H E++ + +H R+ Q +HKNN K+ K Sbjct: 1468 TERLEKQQRVESERKRRAKHSEYINAVLTHSREMQAWHKNNVQKVQK 1608
BLAST of EMLSAG00000000927 vs. C. finmarchicus
Match: gi|592890137|gb|GAXK01068238.1| (TSA: Calanus finmarchicus comp17614_c0_seq1 transcribed RNA sequence) HSP 1 Score: 50.8322 bits (120), Expect = 1.991e-7 Identity = 23/47 (48.94%), Postives = 34/47 (72.34%), Query Frame = 0 Query: 24 SEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70 +E+LEKQ RVE+ERK R +H E++ + +H R+ Q +HKNN K+ K Sbjct: 1468 TERLEKQQRVESERKRRAKHSEYINAVLTHSREMQAWHKNNVQKVQK 1608
BLAST of EMLSAG00000000927 vs. C. finmarchicus
Match: gi|592890132|gb|GAXK01068243.1| (TSA: Calanus finmarchicus comp17614_c1_seq1 transcribed RNA sequence) HSP 1 Score: 50.447 bits (119), Expect = 2.070e-7 Identity = 23/47 (48.94%), Postives = 34/47 (72.34%), Query Frame = 0 Query: 24 SEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70 +E+LEKQ RVE+ERK R +H E++ + +H R+ Q +HKNN K+ K Sbjct: 3290 TERLEKQQRVESERKRRAKHSEYINAVLTHSREMQAWHKNNVQKVQK 3430
BLAST of EMLSAG00000000927 vs. L. salmonis peptides
Match: EMLSAP00000000927 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1161:15715:16165:-1 gene:EMLSAG00000000927 transcript:EMLSAT00000000927 description:"maker-LSalAtl2s1161-snap-gene-0.17") HSP 1 Score: 193.741 bits (491), Expect = 4.527e-65 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0 Query: 1 MGVACPPPSEGAEKKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLKTMPRKSRKKRQRDLKKRDQEPLW 93 MGVACPPPSEGAEKKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLKTMPRKSRKKRQRDLKKRDQEPLW Sbjct: 1 MGVACPPPSEGAEKKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLKTMPRKSRKKRQRDLKKRDQEPLW 93
BLAST of EMLSAG00000000927 vs. L. salmonis peptides
Match: EMLSAP00000009416 (pep:novel supercontig:LSalAtl2s:LSalAtl2s600:248324:253025:1 gene:EMLSAG00000009416 transcript:EMLSAT00000009416 description:"maker-LSalAtl2s600-snap-gene-2.21") HSP 1 Score: 85.8853 bits (211), Expect = 1.394e-20 Identity = 43/58 (74.14%), Postives = 47/58 (81.03%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLKT 71 K+QG EA +EKLEKQ R EAERK RQRHQE+L I SH RDFQ+FHKNNQMKLLKT Sbjct: 137 KRQGLREARATEKLEKQQRXEAERKRRQRHQEYLNAILSHARDFQNFHKNNQMKLLKT 194
BLAST of EMLSAG00000000927 vs. SwissProt
Match: gi|19857556|sp|P25439.2|BRM_DROME (RecName: Full=ATP-dependent helicase brm; AltName: Full=Homeotic gene regulator; AltName: Full=Protein brahma) HSP 1 Score: 60.077 bits (144), Expect = 5.664e-11 Identity = 29/55 (52.73%), Postives = 40/55 (72.73%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68 K+QG EA +EKLEKQ ++EAERK RQ+H EFL + H +D + FH+NN+ +L Sbjct: 484 KRQGLREARATEKLEKQQKLEAERKRRQKHLEFLAAVLQHGKDLREFHRNNKAQL 538
BLAST of EMLSAG00000000927 vs. SwissProt
Match: gi|123790047|sp|Q3TKT4.1|SMCA4_MOUSE (RecName: Full=Transcription activator BRG1; AltName: Full=ATP-dependent helicase SMARCA4; AltName: Full=BRG1-associated factor 190A; Short=BAF190A; AltName: Full=Protein brahma homolog 1; AltName: Full=SNF2-beta; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4) HSP 1 Score: 55.8398 bits (133), Expect = 1.701e-9 Identity = 28/57 (49.12%), Postives = 40/57 (70.18%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70 K+Q EA +EKLEKQ ++E ERK RQ+HQE+L +I H +DF+ +H++ KL K Sbjct: 443 KRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFREYHRSVTGKLQK 499
BLAST of EMLSAG00000000927 vs. SwissProt
Match: gi|81914599|sp|Q8K1P7.1|SMCA4_RAT (RecName: Full=Transcription activator BRG1; AltName: Full=ATP-dependent helicase SMARCA4; AltName: Full=BRG1-associated factor 190A; Short=BAF190A; AltName: Full=Protein brahma homolog 1; AltName: Full=SNF2-beta; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4) HSP 1 Score: 55.8398 bits (133), Expect = 1.822e-9 Identity = 28/57 (49.12%), Postives = 40/57 (70.18%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70 K+Q EA +EKLEKQ ++E ERK RQ+HQE+L +I H +DF+ +H++ KL K Sbjct: 443 KRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFREYHRSVTGKLQK 499
BLAST of EMLSAG00000000927 vs. SwissProt
Match: gi|288559138|sp|A7Z019.1|SMCA4_BOVIN (RecName: Full=Transcription activator BRG1; AltName: Full=ATP-dependent helicase SMARCA4; AltName: Full=BRG1-associated factor 190A; Short=BAF190A; AltName: Full=Protein brahma homolog 1; AltName: Full=SNF2-beta; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4) HSP 1 Score: 55.4546 bits (132), Expect = 2.825e-9 Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70 K+Q EA +EKLEKQ ++E ERK RQ+HQE+L +I H +DF+ +H++ K+ K Sbjct: 435 KRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQK 491
BLAST of EMLSAG00000000927 vs. SwissProt
Match: gi|116242792|sp|P51532.2|SMCA4_HUMAN (RecName: Full=Transcription activator BRG1; AltName: Full=ATP-dependent helicase SMARCA4; AltName: Full=BRG1-associated factor 190A; Short=BAF190A; AltName: Full=Mitotic growth and transcription activator; AltName: Full=Protein BRG-1; AltName: Full=Protein brahma homolog 1; AltName: Full=SNF2-beta; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4) HSP 1 Score: 55.0694 bits (131), Expect = 3.178e-9 Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70 K+Q EA +EKLEKQ ++E ERK RQ+HQE+L +I H +DF+ +H++ K+ K Sbjct: 443 KRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQK 499
BLAST of EMLSAG00000000927 vs. SwissProt
Match: gi|81884744|sp|Q6DIC0.1|SMCA2_MOUSE (RecName: Full=Probable global transcription activator SNF2L2; AltName: Full=ATP-dependent helicase SMARCA2; AltName: Full=BRG1-associated factor 190B; Short=BAF190B; AltName: Full=Protein brahma homolog; AltName: Full=SNF2-alpha; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2) HSP 1 Score: 54.299 bits (129), Expect = 5.925e-9 Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70 K+Q EA +EKLEKQ ++E ERK RQ+HQE+L +I H +DF+ +H++ K+ K Sbjct: 424 KRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQK 480
BLAST of EMLSAG00000000927 vs. SwissProt
Match: gi|212276472|sp|P51531.2|SMCA2_HUMAN (RecName: Full=Probable global transcription activator SNF2L2; AltName: Full=ATP-dependent helicase SMARCA2; AltName: Full=BRG1-associated factor 190B; Short=BAF190B; AltName: Full=Protein brahma homolog; Short=hBRM; AltName: Full=SNF2-alpha; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2) HSP 1 Score: 54.299 bits (129), Expect = 6.534e-9 Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70 K+Q EA +EKLEKQ ++E ERK RQ+HQE+L +I H +DF+ +H++ K+ K Sbjct: 419 KRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQK 475
BLAST of EMLSAG00000000927 vs. Select Arthropod Genomes
Match: AAF49558.3 (brahma, isoform A [Drosophila melanogaster]) HSP 1 Score: 60.077 bits (144), Expect = 2.745e-11 Identity = 29/55 (52.73%), Postives = 40/55 (72.73%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68 K+QG EA +EKLEKQ ++EAERK RQ+H EFL + H +D + FH+NN+ +L Sbjct: 484 KRQGLREARATEKLEKQQKLEAERKRRQKHLEFLAAVLQHGKDLREFHRNNKAQL 538
BLAST of EMLSAG00000000927 vs. Select Arthropod Genomes
Match: AAF49557.1 (brahma, isoform B [Drosophila melanogaster]) HSP 1 Score: 60.077 bits (144), Expect = 2.745e-11 Identity = 29/55 (52.73%), Postives = 40/55 (72.73%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68 K+QG EA +EKLEKQ ++EAERK RQ+H EFL + H +D + FH+NN+ +L Sbjct: 484 KRQGLREARATEKLEKQQKLEAERKRRQKHLEFLAAVLQHGKDLREFHRNNKAQL 538
BLAST of EMLSAG00000000927 vs. Select Arthropod Genomes
Match: AGB94599.1 (brahma, isoform E [Drosophila melanogaster]) HSP 1 Score: 60.077 bits (144), Expect = 2.855e-11 Identity = 29/55 (52.73%), Postives = 40/55 (72.73%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68 K+QG EA +EKLEKQ ++EAERK RQ+H EFL + H +D + FH+NN+ +L Sbjct: 484 KRQGLREARATEKLEKQQKLEAERKRRQKHLEFLAAVLQHGKDLREFHRNNKAQL 538
BLAST of EMLSAG00000000927 vs. Select Arthropod Genomes
Match: AGB94600.1 (brahma, isoform F [Drosophila melanogaster]) HSP 1 Score: 60.077 bits (144), Expect = 2.883e-11 Identity = 29/55 (52.73%), Postives = 40/55 (72.73%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68 K+QG EA +EKLEKQ ++EAERK RQ+H EFL + H +D + FH+NN+ +L Sbjct: 488 KRQGLREARATEKLEKQQKLEAERKRRQKHLEFLAAVLQHGKDLREFHRNNKAQL 542
BLAST of EMLSAG00000000927 vs. Select Arthropod Genomes
Match: EEB19434.1 (Homeotic gene regulator, putative [Pediculus humanus corporis]) HSP 1 Score: 60.077 bits (144), Expect = 2.933e-11 Identity = 29/55 (52.73%), Postives = 40/55 (72.73%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68 K+QG EA +EKLEKQ ++EAERK RQ+HQE+L + H +DF+ H+NN K+ Sbjct: 389 KRQGLREARATEKLEKQQKLEAERKRRQKHQEYLAAVLQHSKDFKEHHRNNLAKV 443
BLAST of EMLSAG00000000927 vs. Select Arthropod Genomes
Match: gb|KPM06633.1| (global transcription activator SNF2L2-like protein [Sarcoptes scabiei]) HSP 1 Score: 58.151 bits (139), Expect = 1.294e-10 Identity = 26/55 (47.27%), Postives = 41/55 (74.55%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68 K+ G EA +EKLEKQ ++E ER+ +Q+HQE++ TI H +DF+ +H+N Q+K+ Sbjct: 508 KRIGLREARITEKLEKQQKLEQERRRKQKHQEYISTILQHAKDFKEYHRNIQLKI 562
BLAST of EMLSAG00000000927 vs. Select Arthropod Genomes
Match: gb|KFM82780.1| (Transcription activator BRG1, partial [Stegodyphus mimosarum]) HSP 1 Score: 57.7658 bits (138), Expect = 1.768e-10 Identity = 28/58 (48.28%), Postives = 40/58 (68.97%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLKT 71 K+QG EA +EKLEKQ ++E ERK RQ+HQE+L + H +DF+ +H+N K+ K Sbjct: 548 KRQGLREARITEKLEKQQKLEQERKRRQKHQEYLNAVLQHAKDFKEYHRNIMGKIGKV 605
BLAST of EMLSAG00000000927 vs. nr
Match: gi|1073535903|gb|JAT85063.1| (hypothetical protein g.8451, partial [Pectinophora gossypiella]) HSP 1 Score: 70.4774 bits (171), Expect = 1.307e-12 Identity = 33/55 (60.00%), Postives = 42/55 (76.36%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68 K+QG EA +EKLEKQ ++EAERK RQ+HQEFL T+ H +DF+ FH+NN KL Sbjct: 101 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLQTVLQHAKDFKEFHRNNVSKL 155
BLAST of EMLSAG00000000927 vs. nr
Match: gi|1133425729|ref|XP_019868655.1| (PREDICTED: LOW QUALITY PROTEIN: ATP-dependent helicase brm-like [Aethina tumida]) HSP 1 Score: 69.3218 bits (168), Expect = 7.757e-12 Identity = 33/57 (57.89%), Postives = 45/57 (78.95%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70 K+QG EA +EKLEKQ ++EAERK RQ+HQEFL ++ H +DF+ FH+NNQ KL++ Sbjct: 391 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLTSVLQHGKDFKDFHRNNQAKLVR 447
BLAST of EMLSAG00000000927 vs. nr
Match: gi|1004395637|gb|EEZ97706.2| (brahma [Tribolium castaneum]) HSP 1 Score: 68.9366 bits (167), Expect = 1.006e-11 Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68 K+QG EA +EKLEKQ ++EAERK RQ+HQEFL ++ H +DF+ FH+NNQ KL Sbjct: 264 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLTSVLQHGKDFKEFHRNNQAKL 318
BLAST of EMLSAG00000000927 vs. nr
Match: gi|1004395636|gb|KYB25021.1| (brahma [Tribolium castaneum]) HSP 1 Score: 68.9366 bits (167), Expect = 1.006e-11 Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68 K+QG EA +EKLEKQ ++EAERK RQ+HQEFL ++ H +DF+ FH+NNQ KL Sbjct: 264 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLTSVLQHGKDFKEFHRNNQAKL 318
BLAST of EMLSAG00000000927 vs. nr
Match: gi|1004395638|gb|KYB25022.1| (brahma [Tribolium castaneum]) HSP 1 Score: 68.9366 bits (167), Expect = 1.108e-11 Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68 K+QG EA +EKLEKQ ++EAERK RQ+HQEFL ++ H +DF+ FH+NNQ KL Sbjct: 217 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLTSVLQHGKDFKEFHRNNQAKL 271
BLAST of EMLSAG00000000927 vs. nr
Match: gi|642937367|ref|XP_008198808.1| (PREDICTED: ATP-dependent helicase brm isoform X2 [Tribolium castaneum] >gi|1004395633|gb|KYB25018.1| brahma [Tribolium castaneum]) HSP 1 Score: 68.9366 bits (167), Expect = 1.289e-11 Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68 K+QG EA +EKLEKQ ++EAERK RQ+HQEFL ++ H +DF+ FH+NNQ KL Sbjct: 487 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLTSVLQHGKDFKEFHRNNQAKL 541
BLAST of EMLSAG00000000927 vs. nr
Match: gi|642937363|ref|XP_008198806.1| (PREDICTED: ATP-dependent helicase brm isoform X1 [Tribolium castaneum] >gi|642937365|ref|XP_008198807.1| PREDICTED: ATP-dependent helicase brm isoform X1 [Tribolium castaneum]) HSP 1 Score: 68.9366 bits (167), Expect = 1.289e-11 Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68 K+QG EA +EKLEKQ ++EAERK RQ+HQEFL ++ H +DF+ FH+NNQ KL Sbjct: 487 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLTSVLQHGKDFKEFHRNNQAKL 541
BLAST of EMLSAG00000000927 vs. nr
Match: gi|642937369|ref|XP_008198809.1| (PREDICTED: ATP-dependent helicase brm isoform X3 [Tribolium castaneum]) HSP 1 Score: 68.5514 bits (166), Expect = 1.393e-11 Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68 K+QG EA +EKLEKQ ++EAERK RQ+HQEFL ++ H +DF+ FH+NNQ KL Sbjct: 440 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLTSVLQHGKDFKEFHRNNQAKL 494
BLAST of EMLSAG00000000927 vs. nr
Match: gi|1041531429|ref|XP_017301764.1| (PREDICTED: ATP-dependent helicase brm [Diaphorina citri]) HSP 1 Score: 68.5514 bits (166), Expect = 1.514e-11 Identity = 30/57 (52.63%), Postives = 45/57 (78.95%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70 K+QG EA +EKLEKQ +VEAERK RQ+HQE++ T+ H +DF+ +H+NNQ ++++ Sbjct: 280 KRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIMR 336
BLAST of EMLSAG00000000927 vs. nr
Match: gi|930665571|gb|KPJ06699.1| (ATP-dependent helicase brm [Papilio machaon]) HSP 1 Score: 67.781 bits (164), Expect = 2.896e-11 Identity = 32/55 (58.18%), Postives = 42/55 (76.36%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68 K+QG EA +EKLEKQ ++EAERK RQ+HQEFL T+ H +DF+ +H+NN KL Sbjct: 523 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLQTVLQHAKDFKEYHRNNVAKL 577
BLAST of EMLSAG00000000927 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold495_size155559-snap-gene-0.32 (protein:Tk09239 transcript:maker-scaffold495_size155559-snap-gene-0.32-mRNA-1 annotation:"homeotic gene") HSP 1 Score: 66.2402 bits (160), Expect = 1.592e-14 Identity = 32/57 (56.14%), Postives = 43/57 (75.44%), Query Frame = 0 Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70 K+QG EA +EKLEKQ R+EAER+ RQ+HQE+L + +H RD Q+FH+NN K+ K Sbjct: 323 KRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQK 379 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000927 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 24
Pagesback to top
BLAST of EMLSAG00000000927 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 3
BLAST of EMLSAG00000000927 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 2
BLAST of EMLSAG00000000927 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 7
BLAST of EMLSAG00000000927 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 17
Pagesback to top
BLAST of EMLSAG00000000927 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
Pagesback to top
BLAST of EMLSAG00000000927 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1161:15715..16165- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000927-683693 ID=EMLSAG00000000927-683693|Name=EMLSAG00000000927|organism=Lepeophtheirus salmonis|type=gene|length=451bp|location=Sequence derived from alignment at LSalAtl2s1161:15715..16165- (Lepeophtheirus salmonis)back to top Add to Basket
|