EMLSAG00000001084, EMLSAG00000001084-683850 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000001084 vs. C. finmarchicus
Match: gi|592770233|gb|GAXK01184335.1| (TSA: Calanus finmarchicus comp135725_c0_seq2 transcribed RNA sequence) HSP 1 Score: 91.2781 bits (225), Expect = 8.713e-18 Identity = 64/212 (30.19%), Postives = 107/212 (50.47%), Query Frame = 0 Query: 710 EKDLIQSRNEVVSELFKLSAQLSQFKNESEKLITAQNFLSDLMKQVSETXXXXXXXXERIAQLRNVVKLSHHSITKKRRDLSVQESQCKKLGETLIGEAYELPSTGSEKIKHKLVQIASNAKLCKKANLESARSEXXXXXXXXXXXXXXXXXXXXXPPQKKEEISGVS---SSIAHLKSG---DT-SIDPHQEFCRFELLGKCNDDACPYQH 914 E ++ R + + LFKLSA +SQ + E+ + + + +L +Q+ ET++L+ ++E++ LR V++ SH IT +R+D++ +E +C+ +G + Y+ P+ G+E I+ KL I + A K V +P + I G S S + HL DT +D +E CRFEL GKC D+AC +QH Sbjct: 2537 EAGVVSMRKTLSTSLFKLSAYMSQLQKETIGVESGIKYAEELRRQLRETEELVMLRQEKVDNLREVIRDSHKQITMQRQDMTSREEECRTVGLEVFDGEYKPPAEGAENIRRKLEMIRNTALKVK-------------------------TTVYANPGESTGSIVGGSDYRSPLEHLNQSARLDTVKLDHTKELCRFELAGKCLDEACQFQH 3097
BLAST of EMLSAG00000001084 vs. C. finmarchicus
Match: gi|592770234|gb|GAXK01184334.1| (TSA: Calanus finmarchicus comp135725_c0_seq1 transcribed RNA sequence) HSP 1 Score: 91.2781 bits (225), Expect = 9.008e-18 Identity = 64/212 (30.19%), Postives = 107/212 (50.47%), Query Frame = 0 Query: 710 EKDLIQSRNEVVSELFKLSAQLSQFKNESEKLITAQNFLSDLMKQVSETXXXXXXXXERIAQLRNVVKLSHHSITKKRRDLSVQESQCKKLGETLIGEAYELPSTGSEKIKHKLVQIASNAKLCKKANLESARSEXXXXXXXXXXXXXXXXXXXXXPPQKKEEISGVS---SSIAHLKSG---DT-SIDPHQEFCRFELLGKCNDDACPYQH 914 E ++ R + + LFKLSA +SQ + E+ + + + +L +Q+ ET++L+ ++E++ LR V++ SH IT +R+D++ +E +C+ +G + Y+ P+ G+E I+ KL I + A K V +P + I G S S + HL DT +D +E CRFEL GKC D+AC +QH Sbjct: 2735 EAGVVSMRKTLSTSLFKLSAYMSQLQKETIGVESGIKYAEELRRQLRETEELVMLRQEKVDNLREVIRDSHKQITMQRQDMTSREEECRTVGLEVFDGEYKPPAEGAENIRRKLEMIRNTALKVK-------------------------TTVYANPGESTGSIVGGSDYRSPLEHLNQSARLDTVKLDHTKELCRFELAGKCLDEACQFQH 3295
BLAST of EMLSAG00000001084 vs. L. salmonis peptides
Match: EMLSAP00000001084 (pep:novel supercontig:LSalAtl2s:LSalAtl2s117:765190:770521:1 gene:EMLSAG00000001084 transcript:EMLSAT00000001084 description:"maker-LSalAtl2s117-augustus-gene-7.28") HSP 1 Score: 1856.65 bits (4808), Expect = 0.000e+0 Identity = 919/919 (100.00%), Postives = 919/919 (100.00%), Query Frame = 0 Query: 1 MTATTKFESTAISLPRPVPAHGGRDAEEGEISDGLEEGEEVFSDISDEDFESNYGRSGIKKDFKDDKMTLAKKKYNLGSSMVGKNTENELVDDFEDVDEDILYLRLMALRSMIPSSDTPTSNKSPISSKSIEDEMEELLEEADKAAAQSSIPPPPIIDIADSDEEKMDLYIKTMTTNMSFLAPIKVKEELHEPSISGGPLDDPNLQYLVMKLKRSLENGGSIASSNQEQEDSFYSPTQSPVHMSPPSSPDVIPLPPERVLKPPGDDEYIENKAGPLGQHQPVDMELGSENEAEIQFFKHQKEIPSVVGWPPHQLLCSGAMSVPNLTPQMLYNCDHYLYQESMYQEELNSICGNKKNFIKAVTAKPPPPPPPXLPSTTPTTSKSKKRIRKRKSTIKFISTSDEEENAQVVQTKRRITPPPPQPPPPVVPINPIDSDDEEAMRAHLLSTMAAKRNAAKNEVDAIKKVTKQVEKAKTEKQPPLKILSKPVKKSLSKLCVETSTEMPFDKLKKYFPNMVRPFIIPLNIPPSSEDESTSTMLFQANLDLFMKNAREDSCTIPRMKRIPPPKPVRKNPPRSKVSATALLLNNKTNPIRKRYISMIEKESLKTRSSIEHLPIERQKEYKMLLARIAVKEKKQQLENSKKDIEDPEEMRKLLISKMKNLKSKIDKNKIDLKKKVLVESKENNEPKNIIEDGGSNVPEKIVNESVVSSEKDLIQSRNEVVSELFKLSAQLSQFKNESEKLITAQNFLSDLMKQVSETKKLIKKKKERIAQLRNVVKLSHHSITKKRRDLSVQESQCKKLGETLIGEAYELPSTGSEKIKHKLVQIASNAKLCKKANLESARSEGVSSSKNDDDSVGVDGDVDDSPPQKKEEISGVSSSIAHLKSGDTSIDPHQEFCRFELLGKCNDDACPYQHHKSVS 919 MTATTKFESTAISLPRPVPAHGGRDAEEGEISDGLEEGEEVFSDISDEDFESNYGRSGIKKDFKDDKMTLAKKKYNLGSSMVGKNTENELVDDFEDVDEDILYLRLMALRSMIPSSDTPTSNKSPISSKSIEDEMEELLEEADKAAAQSSIPPPPIIDIADSDEEKMDLYIKTMTTNMSFLAPIKVKEELHEPSISGGPLDDPNLQYLVMKLKRSLENGGSIASSNQEQEDSFYSPTQSPVHMSPPSSPDVIPLPPERVLKPPGDDEYIENKAGPLGQHQPVDMELGSENEAEIQFFKHQKEIPSVVGWPPHQLLCSGAMSVPNLTPQMLYNCDHYLYQESMYQEELNSICGNKKNFIKAVTAKPPPPPPPXLPSTTPTTSKSKKRIRKRKSTIKFISTSDEEENAQVVQTKRRITPPPPQPPPPVVPINPIDSDDEEAMRAHLLSTMAAKRNAAKNEVDAIKKVTKQVEKAKTEKQPPLKILSKPVKKSLSKLCVETSTEMPFDKLKKYFPNMVRPFIIPLNIPPSSEDESTSTMLFQANLDLFMKNAREDSCTIPRMKRIPPPKPVRKNPPRSKVSATALLLNNKTNPIRKRYISMIEKESLKTRSSIEHLPIERQKEYKMLLARIAVKEKKQQLENSKKDIEDPEEMRKLLISKMKNLKSKIDKNKIDLKKKVLVESKENNEPKNIIEDGGSNVPEKIVNESVVSSEKDLIQSRNEVVSELFKLSAQLSQFKNESEKLITAQNFLSDLMKQVSETKKLIKKKKERIAQLRNVVKLSHHSITKKRRDLSVQESQCKKLGETLIGEAYELPSTGSEKIKHKLVQIASNAKLCKKANLESARSEGVSSSKNDDDSVGVDGDVDDSPPQKKEEISGVSSSIAHLKSGDTSIDPHQEFCRFELLGKCNDDACPYQHHKSVS Sbjct: 1 MTATTKFESTAISLPRPVPAHGGRDAEEGEISDGLEEGEEVFSDISDEDFESNYGRSGIKKDFKDDKMTLAKKKYNLGSSMVGKNTENELVDDFEDVDEDILYLRLMALRSMIPSSDTPTSNKSPISSKSIEDEMEELLEEADKAAAQSSIPPPPIIDIADSDEEKMDLYIKTMTTNMSFLAPIKVKEELHEPSISGGPLDDPNLQYLVMKLKRSLENGGSIASSNQEQEDSFYSPTQSPVHMSPPSSPDVIPLPPERVLKPPGDDEYIENKAGPLGQHQPVDMELGSENEAEIQFFKHQKEIPSVVGWPPHQLLCSGAMSVPNLTPQMLYNCDHYLYQESMYQEELNSICGNKKNFIKAVTAKPPPPPPPXLPSTTPTTSKSKKRIRKRKSTIKFISTSDEEENAQVVQTKRRITPPPPQPPPPVVPINPIDSDDEEAMRAHLLSTMAAKRNAAKNEVDAIKKVTKQVEKAKTEKQPPLKILSKPVKKSLSKLCVETSTEMPFDKLKKYFPNMVRPFIIPLNIPPSSEDESTSTMLFQANLDLFMKNAREDSCTIPRMKRIPPPKPVRKNPPRSKVSATALLLNNKTNPIRKRYISMIEKESLKTRSSIEHLPIERQKEYKMLLARIAVKEKKQQLENSKKDIEDPEEMRKLLISKMKNLKSKIDKNKIDLKKKVLVESKENNEPKNIIEDGGSNVPEKIVNESVVSSEKDLIQSRNEVVSELFKLSAQLSQFKNESEKLITAQNFLSDLMKQVSETKKLIKKKKERIAQLRNVVKLSHHSITKKRRDLSVQESQCKKLGETLIGEAYELPSTGSEKIKHKLVQIASNAKLCKKANLESARSEGVSSSKNDDDSVGVDGDVDDSPPQKKEEISGVSSSIAHLKSGDTSIDPHQEFCRFELLGKCNDDACPYQHHKSVS 919
BLAST of EMLSAG00000001084 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold240_size241964-snap-gene-1.17 (protein:Tk08271 transcript:maker-scaffold240_size241964-snap-gene-1.17-mRNA-1 annotation:"hypothetical protein EAI_14499") HSP 1 Score: 95.1301 bits (235), Expect = 4.476e-20 Identity = 67/215 (31.16%), Postives = 100/215 (46.51%), Query Frame = 0 Query: 710 EKDLIQSRNEVVSELFKLSAQLSQFKNESEKLITAQNFLSDLMKQVSETKKLIKKKKERIAQLRNVVKLSHHSITKKRRDLSVQESQCKKLGETLIGE--AYELPSTGSEKIKHKLVQIASNAKLCKKANLESARSEGVSSSKNDDDSVGVDGDVDDSPPQKKEEISGVSSSIAHLKSGD--------TSIDPHQEFCRFELLGKCNDDACPYQH 914 E +L+ +R + LFKLSA++S F+NE ++DL +V E + L+ KK+ ++ +R + S + + + E +C+ LG G Y LPS S I+ KL IA+NA K A S+ D +GV P K S SS +AH+ + +DPH+ FC F+L G+CND C YQH Sbjct: 760 ECELVAAREVITGSLFKLSAEMSHFRNEKTSRDETIKLVNDLKARVREAEDLLFKKESQVENIRLSIMNSQELLLNRNAHVKGLEDECEMLGRATQGSNGTYVLPSKYSNIIQKKLSSIAANASSMKAAPQNSS-----------DLLLGV-------APSGKSLPSVGSSVLAHMVGSQGGRPTNSWSKVDPHKTFCPFDLAGQCNDAKCSYQH 956 HSP 2 Score: 64.6994 bits (156), Expect = 1.168e-10 Identity = 55/154 (35.71%), Postives = 76/154 (49.35%), Query Frame = 0 Query: 508 KKYFPNMVRPFIIPL---NIPPSSEDE-----STSTMLFQANLDLFMKNAREDSCTIPRMKR-------IPPPKPVRKNPPRSKVSATALLLNNKTNPIRKRYISMIEKESLKTRSSIEHLPIERQKEYKMLLARI----AVKEKKQQLENSKK 642 KK+FPN+ RPFII + +SE E S + LF +LD F+K +R+ T + K+ PPPKP RKNPP + K S EK +L RSSI+HL +Q EYK L I A+K++K +L + +K Sbjct: 444 KKHFPNLFRPFIITVEDQKYDQASEGEEVERRSVRSQLFDMSLDHFLKESRQKVDTKRKRKKPHRSHKLTPPPKPARKNPPG----------------LGKSVFSPAEKATL-MRSSIQHLTTAKQLEYKKLKEIITKKEAIKKEKTKLASFEK 580 HSP 3 Score: 56.225 bits (134), Expect = 4.442e-8 Identity = 102/342 (29.82%), Postives = 134/342 (39.18%), Query Frame = 0 Query: 27 EEGEISDGLEEGEEVFSDISDEDF-ESNYG-------------------RSGIKKDFKDDKMTLAKKKYN--------------LGSSMVGKNTENELVDDFEDVDEDILYLRLMALRSMIPSSDTPTSNKSPISSKSIEDEMEELLEEADKAAAQSSIPPPPIIDIADSDEEKMDLYIKTMTTNMSFLAPIKVKEELHEPSISGGPLDDPNLQYLVMKLKRSLENGGSIASSNQEQEDSFYSPTQSPVHMSPP-----SSP-DVIPLPPE--------------------------RVLKPPGDDEYIENKAGPLGQHQPVDMELGSENEAEIQFFKHQKE 302 EEGEI GEE SDISD +F E G SG+ T + KY + + G+ T +L D+ +D+DED LYLRL+ALRSM P D+P S+ + + + EM +LL+EA+ AA I L +P SGG P L + KLKRSLE Q Q++ YSP+QSP+ P SSP D+ P E ++ P D E +PVDMELGS+NEAE+QFFK Q+E Sbjct: 2 EEGEI------GEEALSDISDAEFLEHTAGGFDLEAGGALWARNPRVSKSSGLGSGRWAPIGTQTRGKYRSHAVAAPLTGDDVPVVTVTSGQATPKQLGDEDDDIDEDELYLRLIALRSMAP--DSPPSSAT-ADQEVMASEMIDLLDEAEAAAQAPEI-------------------------------------TLIQPVGSGG--ISPRL---IRKLKRSLEK-------LQAQDNPSYSPSQSPILGGSPADQTASSPGDLTPSLSEADGGGSPPQSPPSTPPPPPPYPGPKPKISLVPVDQLVAEVAQSAPPNLEPVDMELGSDNEAEVQFFKDQRE 285 The following BLAST results are available for this feature:
BLAST of EMLSAG00000001084 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000001084 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 2
BLAST of EMLSAG00000001084 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000001084 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000001084 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000001084 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000001084 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s117:765190..770521+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000001084-683850 ID=EMLSAG00000001084-683850|Name=EMLSAG00000001084|organism=Lepeophtheirus salmonis|type=gene|length=5332bp|location=Sequence derived from alignment at LSalAtl2s117:765190..770521+ (Lepeophtheirus salmonis)back to top Add to Basket
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