EMLSAG00000001100, EMLSAG00000001100-683866 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000001100 vs. C. finmarchicus
Match: gi|592759199|gb|GAXK01195214.1| (TSA: Calanus finmarchicus comp89522_c3_seq1 transcribed RNA sequence) HSP 1 Score: 30.0314 bits (66), Expect = 9.653e+0 Identity = 23/106 (21.70%), Postives = 41/106 (38.68%), Query Frame = 0 Query: 145 IVFFDTWGRRNGFDPMQKLLTDRYVEMAKMN-KPAKVAPVGEAFRLLMERDRTMFMGLYTSDNSHPSKSGAYTAASVISQTITGKSNEGSSFRDGFGESANIYNKA 249 ++ WG + D M L R + + V GE + + R + GLYT +N+H + + S+ I ++N G F G + ++ K Sbjct: 275 LILGSHWGVIHLLDAMGNSLPSRQAQAHTITVNQVSVDHAGEYYASCSDDGRVVVTGLYTEENTH-NFNMDRPVKSIAIDPIYARANSGRRFMTGVEDKLILHEKV 589
BLAST of EMLSAG00000001100 vs. L. salmonis peptides
Match: EMLSAP00000001100 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1181:19651:20494:-1 gene:EMLSAG00000001100 transcript:EMLSAT00000001100 description:"augustus_masked-LSalAtl2s1181-processed-gene-0.0") HSP 1 Score: 546.584 bits (1407), Expect = 0.000e+0 Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 0 Query: 1 MIVYLCLITLLSPLINACFPGSGSGGGGGVTGIRCSGKPEKWGLLIGNSYTDSGVDTKVKSFLEASEPGYCWRVSKYVKGGQTLAGHANDPTLTNKLKNSGYDFVVIQAQSQEPSFSQAYVETHVFPAAKRLVQNIRAGSPKADIVFFDTWGRRNGFDPMQKLLTDRYVEMAKMNKPAKVAPVGEAFRLLMERDRTMFMGLYTSDNSHPSKSGAYTAASVISQTITGKSNEGSSFRDGFGESANIYNKAGNDAVTSRNWIFN 262 MIVYLCLITLLSPLINACFPGSGSGGGGGVTGIRCSGKPEKWGLLIGNSYTDSGVDTKVKSFLEASEPGYCWRVSKYVKGGQTLAGHANDPTLTNKLKNSGYDFVVIQAQSQEPSFSQAYVETHVFPAAKRLVQNIRAGSPKADIVFFDTWGRRNGFDPMQKLLTDRYVEMAKMNKPAKVAPVGEAFRLLMERDRTMFMGLYTSDNSHPSKSGAYTAASVISQTITGKSNEGSSFRDGFGESANIYNKAGNDAVTSRNWIFN Sbjct: 1 MIVYLCLITLLSPLINACFPGSGSGGGGGVTGIRCSGKPEKWGLLIGNSYTDSGVDTKVKSFLEASEPGYCWRVSKYVKGGQTLAGHANDPTLTNKLKNSGYDFVVIQAQSQEPSFSQAYVETHVFPAAKRLVQNIRAGSPKADIVFFDTWGRRNGFDPMQKLLTDRYVEMAKMNKPAKVAPVGEAFRLLMERDRTMFMGLYTSDNSHPSKSGAYTAASVISQTITGKSNEGSSFRDGFGESANIYNKAGNDAVTSRNWIFN 262
BLAST of EMLSAG00000001100 vs. nr
Match: gi|910162716|ref|WP_050009667.1| (hypothetical protein [Flavobacterium sp. B17]) HSP 1 Score: 121.324 bits (303), Expect = 1.055e-29 Identity = 72/196 (36.73%), Postives = 106/196 (54.08%), Query Frame = 0 Query: 36 SGKPEKWGLLIGNSYTDSGVDTKVKSFLEASEPGYCWRVSKYVKGGQTLAGHANDPTLTNKLKNSGYDFVVIQAQSQEPSFSQAYVETHVFPAAKRLVQNIRAGSPKADIVFFDTWGRRNG-------------FDPMQKLLTDRYVEMAKMNKPAKVAPVGEAFRLLMERDRTMFMGLYTSDNSHPSKSGAYTAA 218 SG+ K IGNSYT ++ S + S G Y GG TL HA +P ++N + +D+VV+Q QSQ P+FS +VET FP A++L NIR +P +++F+ TWGR+NG ++ M +L +RY++ A N+ + V+PVG +R + R + LY SD SHPS G+ AA Sbjct: 16 SGQVTKNVYFIGNSYTGENNLPQLISNIAGSA-GDNLSFQSYTPGGSTLQDHAGNPVVSNTISQGNWDYVVLQEQSQIPAFSTTFVETQFFPFAEQLANNIRDNNPCGNVIFYMTWGRKNGDTQNCTPGSYLCTYEGMDDMLYERYMQAAAYNE-SIVSPVGRVWRYI--RMHYPALELYESDESHPSYLGSMIAA 207
BLAST of EMLSAG00000001100 vs. nr
Match: gi|1082491905|gb|OFY36401.1| (hypothetical protein A2W91_02335 [Bacteroidetes bacterium GWF2_38_335] >gi|1082546192|gb|OFY80687.1| hypothetical protein A2281_05350 [Bacteroidetes bacterium RIFOXYA12_FULL_38_20]) HSP 1 Score: 121.709 bits (304), Expect = 2.414e-28 Identity = 80/236 (33.90%), Postives = 120/236 (50.85%), Query Frame = 0 Query: 44 LLIGNSYT-DSGVDTKVKSFLEASEPGYCWRVSKYVKGGQTLAGHANDPTLTNKLKNSGYDFVVIQAQSQEPSFSQAYVETHVFPAAKRLVQNIRAGSPKADIVFFDTWGRRNG-------------FDPMQKLLTDRYVEMAKMNKPAKVAPVGEAFRLLMERDRTMFMGLYTSDNSHPSKSGAYTAASVISQTITGKSNEGSSFRDGFGESANIYNKAGNDAVTSR---NWIFN 262 L IGNSY + + T +K+ A G + GG HA + T K+ +DFV++QAQSQEPS+ + VE+ V+P A L +I++ +P + VFF TWGR+ G F MQ+ L Y+ M + N + V+PVG A++ M+ D + LY+ DNSHPS +G Y A V+ +T+ KS G+++ Y + D V S N++FN Sbjct: 26 LFIGNSYVYTNDLPTVLKNL--ALSLGDTITTDQNTPGGYRFLNHATNATTLAKISQDDWDFVILQAQSQEPSWPPSQVESEVYPYATILNDSIKSNNPCTETVFFMTWGRKYGDEMNCAGWPPVCTFLGMQERLMAGYMTMTEQNS-STVSPVGLAWKYCMDNDPDSLINLYSGDNSHPSIAGTYLTACVLYRTMFKKSPAGATYIGSLNADVATYLQLVADYVVSNDDYNFLFN 258
BLAST of EMLSAG00000001100 vs. nr
Match: gi|1057686022|ref|WP_068959854.1| (SGNH/GDSL hydrolase family protein [Parabacteroides sp. YL27] >gi|1045277774|gb|ANU62455.1| hypothetical protein A4V02_00975 [Parabacteroides sp. YL27]) HSP 1 Score: 117.857 bits (294), Expect = 3.154e-28 Identity = 81/234 (34.62%), Postives = 116/234 (49.57%), Query Frame = 0 Query: 44 LLIGNSYT-DSGVDTKVKSFLEASEPGYCWRVSKYVKGGQTLAGHANDPTLTNKLKNSGYDFVVIQAQSQEPSFSQAYVETHVFPAAKRLVQNIRAGSPKADIVFFDTWGRR-------------NGFDPMQKLLTDRYVEMAKMNKPAKVAPVGEAFRLLMERDRTMFMGLYTSDNSHPSKSGAYTAASVISQTITGKSNEGSSFRDGF-GESANIYNKAGNDAVTSRNWIFN 262 L IGNS+T + + V S A+ ++ VKGGQ L+GH +P L LK G+DFV++Q QS +P+ A V V+P+A + + GSP A ++FF TWG + N ++ MQ L Y+EMA N A APVG A++ + E + LY +D HPS+ G+Y AA+VI T+ K + S FR G G A + V + N Sbjct: 36 LFIGNSFTYHNKMPQMVDSI--ATSQKRAVSITTVVKGGQRLSGHLENPKLHELLKKGGWDFVIVQEQSTDPALPTAQVVEKVYPSAHTIDSLVMGGSPNAKVIFFMTWGHKYGYRVPMPEYPPMNSYEGMQHRLITSYLEMAYDND-ALCAPVGLAWKRVREERPNII--LYNNDCYHPSRIGSYLAANVIYTTMFPKRYQ-SKFRAGLSGSEAEYLQQVAQSTVLDNLTLLN 263
BLAST of EMLSAG00000001100 vs. nr
Match: gi|916613600|ref|WP_051220691.1| (PKD domain-containing protein [Flavobacterium filum]) HSP 1 Score: 118.242 bits (295), Expect = 3.460e-27 Identity = 77/224 (34.38%), Postives = 113/224 (50.45%), Query Frame = 0 Query: 29 GVTGIRCSGKPEKWGLLIGNSYTDSGVDTKVKSFLEASEPGYCWRVSKYVKGGQTLAGHANDPTLTNKLKNSGYDFVVIQAQSQEPSFSQAYVETHVFPAAKRLVQNIRAGSPKADIVFFDTWGRRNG-------------FDPMQKLLTDRYVEMAKMNKPAKVAPVGEAFRLLMERDRTMFMGLYTSDNSHPSKSGAYTAASVISQTITGKSNEGSSFRDGF 239 G + C K L +GNSYT + ++ + A+ G Y GG T GH+ + T NK+ +DFVV+Q QSQ PSF + V+ V+P A++L I +P A+ VF+ TWGR+NG + M LL +RY MA+ N A ++PVG +R + R+ + LY++D SHPS +G Y AA T+ K+ E +F G Sbjct: 14 GCFSVVCGQNSTKRTLFLGNSYTATNNLPQMIDNV-ANSTGDDLIYDSYTPGGYTFMGHSTNATSLNKIAQGTWDFVVLQEQSQLPSFPDSQVQNQVYPYAQQLNNLINQQNPCAETVFYMTWGRKNGDASNCANWPPVCTYTGMDDLLNERYRFMAEQND-AILSPVGAVWRYI--RENYPSIELYSADGSHPSVAGTYAAACSFYATLFRKNPEQITFTAGL 233
BLAST of EMLSAG00000001100 vs. nr
Match: gi|1094326204|emb|SEJ17163.1| (Por secretion system C-terminal sorting domain-containing protein [Flavobacterium terrigena]) HSP 1 Score: 115.931 bits (289), Expect = 2.141e-26 Identity = 73/200 (36.50%), Postives = 105/200 (52.50%), Query Frame = 0 Query: 44 LLIGNSYTDSGVDTKVKSFLEASEPGYCWRVSKYVKGGQTLAGHANDPTLTNKLKNSGYDFVVIQAQSQEPSFSQAYVETHVFPAAKRLVQNIRAGSPKADIVFFDTWGRRNG-------------FDPMQKLLTDRYVEMAKMNKPAKVAPVGEAFRLLMERDRTMFMGLYTSDNSHPSKSGAYTAASVISQTITGKSN 230 L +GNSYT + + AS G + GG T GH+ + T K++ +DFVV+Q QSQ PSF YV + +P A L I +P A+ VF+ TWGR+NG ++ M LL++RY+EMA N A ++PVG +R L + T + LY+ D SHPS +G+Y AA + T+ +SN Sbjct: 24 LFLGNSYTGVNDLPGLTQQVTAST-GNTLIIDSNTPGGYTFQGHSTNTTSLQKIQQGNWDFVVLQEQSQIPSFPITYVTANCYPFATSLNNTILQNNPCAETVFYMTWGRQNGDSENCADYPPVCTYEGMDNLLSERYIEMANSNN-AIISPVGAVWRHLRTNNPT--LNLYSGDESHPSLAGSYVAACTFN-TVLFRSN 218
BLAST of EMLSAG00000001100 vs. nr
Match: gi|1055907980|gb|AOE11590.1| (conserved hypothetical protein [uncultured bacterium]) HSP 1 Score: 115.161 bits (287), Expect = 3.551e-26 Identity = 79/217 (36.41%), Postives = 117/217 (53.92%), Query Frame = 0 Query: 33 IRCSGKPEKWGLLIGNSYTDSGVDT-KVKSFLEASEPGYCWRVSKYVKGGQTLAGHANDPTLTNKLKNSGYDFVVIQAQSQEPSFSQAYVETHVFPAAKRLVQNIRAGSPKADIVFFDTWGRRNG-------------FDPMQKLLTDRYVEMAKMNKPAKVAPVGEAFRLLMERDRTMFMGLYTSDNSHPSKSGAYTAASVISQTITGKSNEGSSF 235 I S K L +GNSYT GV+ + ++ A G GG T GHA + T K+ +DFV++Q QSQ+PSF + V T V+P A+ LV +I++ + A+ +F+ TWGR+NG +D MQ L + Y+EM+ N V+PVG A++ + RD + LY+SD SHPS +G+Y AA V ++ +S G+SF Sbjct: 16 INTSFAQTKNVLFLGNSYT--GVNNLPLLTYNLALSLGDTINYDSNTPGGYTYQGHATNATSLAKIAQGDWDFVILQEQSQKPSFPPSQVATEVYPYAQILVDSIKSANACAEPLFYMTWGRKNGDAGNCASYPPLCTYDGMQGRLRESYMEMSADND-CSVSPVGAAWKYV--RDNYPAIELYSSDESHPSINGSYLAACVHYASMFRESPVGASF 227
BLAST of EMLSAG00000001100 vs. nr
Match: gi|1000282682|gb|KXK44444.1| (PKD domain-containing protein [Bacteroidetes bacterium OLB11]) HSP 1 Score: 113.62 bits (283), Expect = 1.317e-25 Identity = 73/206 (35.44%), Postives = 108/206 (52.43%), Query Frame = 0 Query: 44 LLIGNSYT-DSGVDTKVKSFLEASEPGYCWRVSKYVKGGQTLAGHANDPTLTNKLKNSGYDFVVIQAQSQEPSFSQAYVETHVFPAAKRLVQNIRAGSPKADIVFFDTWGRRNG-------------FDPMQKLLTDRYVEMAKMNKPAKVAPVGEAFRLLMERDRTMFMGLYTSDNSHPSKSGAYTAASVISQTITGKSNEGSSF 235 L +GNSYT + + +K A V Y GG T AN P KL+ + +D+V++Q QSQEP+FS A V +P AK+L + +P A+ +FF TWGR+NG F+ MQ+ L + Y+EM + N A +PVG A++ + R++ + LY D SHP+ +G Y AA +I KS G+S+ Sbjct: 26 LFLGNSYTYTNDLPNTLKQL--ALSLNDTLEVDSYALGGATFNNLANSPNTLAKLQIANWDYVILQGQSQEPAFSPAQVANDTYPYAKQLDSLVHVYNPCAETIFFMTWGRKNGDVANCAAYPPICTFEGMQQRLRESYMEMTQDNH-ATCSPVGVAWKNV--RNQFPAIELYNPDESHPALNGTYLAACTFYSSIYQKSTVGASY 226
BLAST of EMLSAG00000001100 vs. nr
Match: gi|1113288024|gb|OJV52819.1| (hypothetical protein BGO31_03415 [Bacteroidetes bacterium 43-16]) HSP 1 Score: 113.235 bits (282), Expect = 2.076e-25 Identity = 72/207 (34.78%), Postives = 103/207 (49.76%), Query Frame = 0 Query: 43 GLLIGNSYTD-SGVDTKVKSFLEASEPGYCWRVSKYVKGGQTLAGHANDPTLTNKLKNSGYDFVVIQAQSQEPSFSQAYVETHVFPAAKRLVQNIRAGSPKADIVFFDTWGRRNG-------------FDPMQKLLTDRYVEMAKMNKPAKVAPVGEAFRLLMERDRTMFMGLYTSDNSHPSKSGAYTAASVISQTITGKSNEGSSF 235 L +GNSYTD + + VK A G SK GGQT GH + T N ++ +D+V++Q QSQ PSF A V V+P A++L ++A +P A +F+ TWGR+NG ++ M +L RY MA N A +APV + +R L R + LY D SHPS G++ AA I K +++ Sbjct: 27 ALFLGNSYTDYNNLPELVKQL--ALSAGDTLEYSKNTPGGQTFQGHTTNATSLNLIQAGNWDYVILQEQSQLPSFPDAQVANQVYPYARKLDSLVKAHNPCAQTMFYMTWGRKNGDAGNCANMPVLCTYEGMDSMLQLRYTIMAD-NNDASIAPVAKVWRKL--RQDHASIDLYIGDESHPSNKGSFAAACTFYAMIFDKDPTAATY 228
BLAST of EMLSAG00000001100 vs. nr
Match: gi|918744492|ref|WP_052597907.1| (T9SS C-terminal target domain-containing protein [Aureispira sp. CCB-QB1]) HSP 1 Score: 112.849 bits (281), Expect = 3.331e-25 Identity = 77/219 (35.16%), Postives = 108/219 (49.32%), Query Frame = 0 Query: 37 GKPEKWGLLIGNSYTDSGVDTKVKSFLEASEPGYCWRVSKYVKGGQTLAGHANDPTLTNKLKNSGYDFVVIQAQSQEPSFSQAYVETHVFPAAKRLVQNIRAGSPKADIVFFDTWGRRNG-------------FDPMQKLLTDRYVEMAKMNKPAKVAPVGEAFRLLMERDRTMFMGLYTSDNSHPSKSGAYTAASVISQTITGKSNEGSSFRDGFGES 242 G+ K IGNSYT ++ + L A+ G + GG L H + N ++ +D+V+IQ QSQ+PSFS A V T V P A +L +I A +P A+ VF+ TWGR+NG +D MQ L Y+ M N+ +PVG A++++ RD M LY D SHPS +G+Y AA T+ KS G +F S Sbjct: 20 GQVTKRAFFIGNSYTYFNTMPEIINRL-ANANGDTLIHASNTPGGAQLVQHVTNNNTMNGIRQGNWDYVIIQEQSQKPSFSPAQVATDVLPYAAQLNDSIVAHNPCAETVFYMTWGRKNGDQNNCQFYPPVCTYDGMQSRLRSSYLLMTNQNQ-GICSPVGAAWKVV--RDSFPTMELYNPDQSHPSYAGSYLAACTFYATLFRKSPVGLNFYGNLSAS 234
BLAST of EMLSAG00000001100 vs. nr
Match: gi|1011884334|ref|WP_062701148.1| (hypothetical protein [Chryseobacterium indologenes] >gi|929459766|gb|KPE50232.1| hypothetical protein AOB46_15915 [Chryseobacterium indologenes]) HSP 1 Score: 112.464 bits (280), Expect = 3.439e-25 Identity = 69/206 (33.50%), Postives = 109/206 (52.91%), Query Frame = 0 Query: 44 LLIGNSYTDSGVDTKVKSFLEASEPGYCWRVSKYVKGGQTLAGHANDPTLTNKLKNSGYDFVVIQAQSQEPSFSQAYVETHVFPAAKRLVQNIRAGSPKADIVFFDTWGRRNG--------------FDPMQKLLTDRYVEMAKMNKPAKVAPVGEAFRLLMERDRTMFMGLYTSDNSHPSKSGAYTAASVISQTITGKSNEGSSF 235 +GNSYT + ++ + AS G + GG L H+ +P + + + +D+VV+Q QSQ PSF +YV+ +FP AK+L + I+ + + +FF TWG +NG ++ M L++ RY EMA +N+ + V+PVG+ +R++ R + M LY+SD SHPS G+ AA I K E +SF Sbjct: 25 FFVGNSYTYTNNLPELVKLIAASS-GDQLAYESHTIGGARLKQHSENPAVASVINQGNWDYVVLQEQSQIPSFPNSYVQNEMFPYAKQLAEQIKNANACGNPLFFMTWGYKNGDATNCANGNTASCTYEGMDDLISARYTEMASLNE-SLVSPVGKVWRMI--RQQYPEMELYSSDGSHPSYLGSMAAAYTFYTLIFKKDPELASF 226
BLAST of EMLSAG00000001100 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold733_size105121-snap-gene-0.21 (protein:Tk04995 transcript:maker-scaffold733_size105121-snap-gene-0.21-mRNA-1 annotation:"hypothetical protein") HSP 1 Score: 73.1738 bits (178), Expect = 2.091e-15 Identity = 46/143 (32.17%), Postives = 71/143 (49.65%), Query Frame = 0 Query: 76 KYVKGGQTLAGHANDPTLTNKLKNSGYDFVVIQAQSQEPSFSQAYVETHVFPAAKRLVQNIRAGSPKADIVFFDTWGRRNG-------FDP------MQKLLTDRYVEMAKMNKPAKVAPVGEAFRLLMER-DRTMFMGLYTS 204 ++ +GG TL H N K+ + +D VV+Q S + + +P A+ L IR GSP+ ++ F+ TWGR G F P MQ +++ Y A M KP+++APVGE+FR + E T F L+ + Sbjct: 72 QHTEGGWTLEMHWNSTETLEKIHSRVWDVVVLQEYSTGLAKEDTKLCQSSYPFAQNLANEIREGSPEVELQFYQTWGRPYGEDSTCDTFSPNCDYFTMQDVISTNYETYACMFKPSRIAPVGESFRHVREELGETAFFELFET 214 The following BLAST results are available for this feature:
BLAST of EMLSAG00000001100 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000001100 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 11
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BLAST of EMLSAG00000001100 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000001100 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000001100 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000001100 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
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BLAST of EMLSAG00000001100 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1181:19651..20494- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000001100-683866 ID=EMLSAG00000001100-683866|Name=EMLSAG00000001100|organism=Lepeophtheirus salmonis|type=gene|length=844bp|location=Sequence derived from alignment at LSalAtl2s1181:19651..20494- (Lepeophtheirus salmonis)back to top Add to Basket
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