EMLSAG00000001105, EMLSAG00000001105-683871 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000001105 vs. C. finmarchicus
Match: gi|592791100|gb|GAXK01163468.1| (TSA: Calanus finmarchicus comp218561_c2_seq8 transcribed RNA sequence) HSP 1 Score: 38.891 bits (89), Expect = 4.736e-2 Identity = 19/54 (35.19%), Postives = 31/54 (57.41%), Query Frame = 0 Query: 208 IAASENNELLRHPLLGVYLSKKWKDF-KLIYYLGFIFQIVAALCVTGYALVRKN 260 + + +LLRHPL L +KWK F + I+Y F+ ++ + +TGY L + N Sbjct: 1305 MVQEKQKQLLRHPLCLSLLRRKWKRFGRYIFYSQFLLYVLFLISITGYILYKLN 1466
BLAST of EMLSAG00000001105 vs. C. finmarchicus
Match: gi|592791105|gb|GAXK01163463.1| (TSA: Calanus finmarchicus comp218561_c2_seq3 transcribed RNA sequence) HSP 1 Score: 38.891 bits (89), Expect = 4.973e-2 Identity = 19/54 (35.19%), Postives = 31/54 (57.41%), Query Frame = 0 Query: 208 IAASENNELLRHPLLGVYLSKKWKDF-KLIYYLGFIFQIVAALCVTGYALVRKN 260 + + +LLRHPL L +KWK F + I+Y F+ ++ + +TGY L + N Sbjct: 1305 MVQEKQKQLLRHPLCLSLLRRKWKRFGRYIFYSQFLLYVLFLISITGYILYKLN 1466
BLAST of EMLSAG00000001105 vs. C. finmarchicus
Match: gi|592791107|gb|GAXK01163461.1| (TSA: Calanus finmarchicus comp218561_c2_seq1 transcribed RNA sequence) HSP 1 Score: 38.891 bits (89), Expect = 5.165e-2 Identity = 19/54 (35.19%), Postives = 31/54 (57.41%), Query Frame = 0 Query: 208 IAASENNELLRHPLLGVYLSKKWKDF-KLIYYLGFIFQIVAALCVTGYALVRKN 260 + + +LLRHPL L +KWK F + I+Y F+ ++ + +TGY L + N Sbjct: 1305 MVQEKQKQLLRHPLCLSLLRRKWKRFGRYIFYSQFLLYVLFLISITGYILYKLN 1466
BLAST of EMLSAG00000001105 vs. C. finmarchicus
Match: gi|592945568|gb|GAXK01012985.1| (TSA: Calanus finmarchicus comp681362_c2_seq3 transcribed RNA sequence) HSP 1 Score: 37.7354 bits (86), Expect = 7.716e-2 Identity = 28/88 (31.82%), Postives = 43/88 (48.86%), Query Frame = 0 Query: 182 LNGHPVFKE-----ALQLNPQLLSNIKVLK-------------KIAASENNELLRHPLLGVYLSKKWKDFKLIYYLGFIFQIVAALCV 251 LN H V++E L+L ++K LK KI+ ++ ELL+HPL V L +KW+ + YY G+I + LC+ Sbjct: 487 LNSHTVYQEIDNGETLELEELKKKDVKRLKYEDTATQVMEDMVKISP-DHKELLKHPLCMVLLKRKWRKLEWFYY-GWILAKLVFLCL 744
BLAST of EMLSAG00000001105 vs. C. finmarchicus
Match: gi|592945567|gb|GAXK01012986.1| (TSA: Calanus finmarchicus comp681362_c2_seq4 transcribed RNA sequence) HSP 1 Score: 37.7354 bits (86), Expect = 7.721e-2 Identity = 28/88 (31.82%), Postives = 43/88 (48.86%), Query Frame = 0 Query: 182 LNGHPVFKE-----ALQLNPQLLSNIKVLK-------------KIAASENNELLRHPLLGVYLSKKWKDFKLIYYLGFIFQIVAALCV 251 LN H V++E L+L ++K LK KI+ ++ ELL+HPL V L +KW+ + YY G+I + LC+ Sbjct: 475 LNSHTVYQEIDNGETLELEELKKKDVKRLKYEDTATQVMEDMVKISP-DHKELLKHPLCMVLLKRKWRKLEWFYY-GWILAKLVFLCL 732
BLAST of EMLSAG00000001105 vs. C. finmarchicus
Match: gi|592945569|gb|GAXK01012984.1| (TSA: Calanus finmarchicus comp681362_c2_seq2 transcribed RNA sequence) HSP 1 Score: 37.7354 bits (86), Expect = 9.846e-2 Identity = 28/88 (31.82%), Postives = 43/88 (48.86%), Query Frame = 0 Query: 182 LNGHPVFKE-----ALQLNPQLLSNIKVLK-------------KIAASENNELLRHPLLGVYLSKKWKDFKLIYYLGFIFQIVAALCV 251 LN H V++E L+L ++K LK KI+ ++ ELL+HPL V L +KW+ + YY G+I + LC+ Sbjct: 475 LNSHTVYQEIDNGETLELEELKKKDVKRLKYEDTATQVMEDMVKISP-DHKELLKHPLCMVLLKRKWRKLEWFYY-GWILAKLVFLCL 732
BLAST of EMLSAG00000001105 vs. C. finmarchicus
Match: gi|592945570|gb|GAXK01012983.1| (TSA: Calanus finmarchicus comp681362_c2_seq1 transcribed RNA sequence) HSP 1 Score: 37.7354 bits (86), Expect = 1.030e-1 Identity = 28/88 (31.82%), Postives = 43/88 (48.86%), Query Frame = 0 Query: 182 LNGHPVFKE-----ALQLNPQLLSNIKVLK-------------KIAASENNELLRHPLLGVYLSKKWKDFKLIYYLGFIFQIVAALCV 251 LN H V++E L+L ++K LK KI+ ++ ELL+HPL V L +KW+ + YY G+I + LC+ Sbjct: 487 LNSHTVYQEIDNGETLELEELKKKDVKRLKYEDTATQVMEDMVKISP-DHKELLKHPLCMVLLKRKWRKLEWFYY-GWILAKLVFLCL 744
BLAST of EMLSAG00000001105 vs. C. finmarchicus
Match: gi|592884990|gb|GAXK01073385.1| (TSA: Calanus finmarchicus comp148341_c6_seq6 transcribed RNA sequence) HSP 1 Score: 36.1946 bits (82), Expect = 1.207e-1 Identity = 13/34 (38.24%), Postives = 22/34 (64.71%), Query Frame = 0 Query: 210 ASENNELLRHPLLGVYLSKKWKDFKLIYYLGFIF 243 + ++ LL+HPL+ +L KW+ + YYLG +F Sbjct: 91 SKQHRHLLKHPLISSFLWMKWQRIRSFYYLGLVF 192
BLAST of EMLSAG00000001105 vs. C. finmarchicus
Match: gi|592945571|gb|GAXK01012982.1| (TSA: Calanus finmarchicus comp681362_c0_seq3 transcribed RNA sequence) HSP 1 Score: 35.4242 bits (80), Expect = 1.214e-1 Identity = 18/58 (31.03%), Postives = 33/58 (56.90%), Query Frame = 0 Query: 202 IKVLKKIA--ASENNELLRHPLLGVYLSKKWKDFKLIYYLGFIFQIVAALCVTGYALV 257 I+VL+ + + ++ ELLRHPL L +KW+ + IYY + +++ + + A V Sbjct: 62 IQVLEDMVNISPDHKELLRHPLCMALLKRKWRQLEYIYYGWMLSKVIFLILLISLAAV 235
BLAST of EMLSAG00000001105 vs. C. finmarchicus
Match: gi|592946370|gb|GAXK01012183.1| (TSA: Calanus finmarchicus comp3238926_c0_seq1 transcribed RNA sequence) HSP 1 Score: 36.965 bits (84), Expect = 1.228e-1 Identity = 20/65 (30.77%), Postives = 38/65 (58.46%), Query Frame = 0 Query: 195 NPQLLSN-IKVLKKIAASENNELLRHPLLGVYLSKKWKDFKLIYYLGFIFQIVAALCVTGYALVR 258 N Q+ S IKV+ ++ ++ +LL+HP+L YL KW+ K YY +F++++ L + ++ Sbjct: 565 NHQVESQVIKVMVNLSP-DHKDLLKHPVLKAYLFMKWRKVKSWYYAWMVFKVLSFLSFISMSYIK 756
BLAST of EMLSAG00000001105 vs. L. salmonis peptides
Match: EMLSAP00000001105 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1185:44264:52957:1 gene:EMLSAG00000001105 transcript:EMLSAT00000001105 description:"maker-LSalAtl2s1185-augustus-gene-0.13") HSP 1 Score: 1146.34 bits (2964), Expect = 0.000e+0 Identity = 558/558 (100.00%), Postives = 558/558 (100.00%), Query Frame = 0 Query: 1 MKKPWTNRYSVNNHDYSNIRTTEDDETIYLEPTSSIYASIKPIKERLPQERHNCNIILEQSNQGEKIFRDAIVEGNLKNVNDFVNETCSVAVLLRPLRGKSECEEDDGQLFHPFDLAIQFEQFKILRTLIDHIIRETGVEIFIEILRTTKIQELDVVFMDLIVRYPVAAHALMNSFVSYVKLNGHPVFKEALQLNPQLLSNIKVLKKIAASENNELLRHPLLGVYLSKKWKDFKLIYYLGFIFQIVAALCVTGYALVRKNDDDTGMYSKIWKGFRYVGIILTSIRGFYQICETVRSIIQHQRPLFRPLLLIKEGIFLGFVFAGLLDEGNTAMIYRGRSCTISWVRLFVSISTIPDQRCLYAYAFKRIIVIAFFKAGLGSGIFFPLIGFILGAYIMSEDGTSFSGESLGVLVIFAIFGILVVTYLVGLSVAKVREDVLSIRGEDYIKKIMTLTVYKYQKLIFFWLKILTFLRKYFSSSSSTYIILPKQFEDENAPKKGVFSFCQTTDTPIYNKINENESLDYSNLQLTKYRTLLQTIESIPHQNFPNESGYTNLYWNNR 558 MKKPWTNRYSVNNHDYSNIRTTEDDETIYLEPTSSIYASIKPIKERLPQERHNCNIILEQSNQGEKIFRDAIVEGNLKNVNDFVNETCSVAVLLRPLRGKSECEEDDGQLFHPFDLAIQFEQFKILRTLIDHIIRETGVEIFIEILRTTKIQELDVVFMDLIVRYPVAAHALMNSFVSYVKLNGHPVFKEALQLNPQLLSNIKVLKKIAASENNELLRHPLLGVYLSKKWKDFKLIYYLGFIFQIVAALCVTGYALVRKNDDDTGMYSKIWKGFRYVGIILTSIRGFYQICETVRSIIQHQRPLFRPLLLIKEGIFLGFVFAGLLDEGNTAMIYRGRSCTISWVRLFVSISTIPDQRCLYAYAFKRIIVIAFFKAGLGSGIFFPLIGFILGAYIMSEDGTSFSGESLGVLVIFAIFGILVVTYLVGLSVAKVREDVLSIRGEDYIKKIMTLTVYKYQKLIFFWLKILTFLRKYFSSSSSTYIILPKQFEDENAPKKGVFSFCQTTDTPIYNKINENESLDYSNLQLTKYRTLLQTIESIPHQNFPNESGYTNLYWNNR Sbjct: 1 MKKPWTNRYSVNNHDYSNIRTTEDDETIYLEPTSSIYASIKPIKERLPQERHNCNIILEQSNQGEKIFRDAIVEGNLKNVNDFVNETCSVAVLLRPLRGKSECEEDDGQLFHPFDLAIQFEQFKILRTLIDHIIRETGVEIFIEILRTTKIQELDVVFMDLIVRYPVAAHALMNSFVSYVKLNGHPVFKEALQLNPQLLSNIKVLKKIAASENNELLRHPLLGVYLSKKWKDFKLIYYLGFIFQIVAALCVTGYALVRKNDDDTGMYSKIWKGFRYVGIILTSIRGFYQICETVRSIIQHQRPLFRPLLLIKEGIFLGFVFAGLLDEGNTAMIYRGRSCTISWVRLFVSISTIPDQRCLYAYAFKRIIVIAFFKAGLGSGIFFPLIGFILGAYIMSEDGTSFSGESLGVLVIFAIFGILVVTYLVGLSVAKVREDVLSIRGEDYIKKIMTLTVYKYQKLIFFWLKILTFLRKYFSSSSSTYIILPKQFEDENAPKKGVFSFCQTTDTPIYNKINENESLDYSNLQLTKYRTLLQTIESIPHQNFPNESGYTNLYWNNR 558 The following BLAST results are available for this feature:
BLAST of EMLSAG00000001105 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000001105 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
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BLAST of EMLSAG00000001105 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000001105 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000001105 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000001105 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000001105 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1185:44264..52957+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000001105-683871 ID=EMLSAG00000001105-683871|Name=EMLSAG00000001105|organism=Lepeophtheirus salmonis|type=gene|length=8694bp|location=Sequence derived from alignment at LSalAtl2s1185:44264..52957+ (Lepeophtheirus salmonis)back to top Add to Basket
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