EMLSAG00000001535, EMLSAG00000001535-684301 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000001535
Unique NameEMLSAG00000001535-684301
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of EMLSAG00000001535 vs. C. finmarchicus
Match: gi|592934166|gb|GAXK01024387.1| (TSA: Calanus finmarchicus comp484170_c1_seq6 transcribed RNA sequence)

HSP 1 Score: 80.1073 bits (196), Expect = 1.787e-15
Identity = 53/159 (33.33%), Postives = 78/159 (49.06%), Query Frame = 0 
Query:   56 QQESSRVSSILTERPPVTSNNFHKQIASKSCTIWIHLQANISTEWEQNSIVINNPKTTAATKIGSKTLTKVPFSIQKTFXXXXXXXXXXIKIEASTIPEGRHMDENDSFNPKTVHRCILQTSDKSKYSKSFVLECHVCHWEYSSYDKYFKHLIELHCAR 214
            Q  +   S+ LT  PP  S +  ++  S  C +WIHLQA+I TEW    +V+   +  AA    SK       +  +   +   +  +  K  AS               P+T+HRCIL+TS K+K  K+  LECHVC+  Y +Y+ YF HLI+  C +
Sbjct:  425 QLNAQATSTPLTISPPSNSKSDIRRGVS--CIMWIHLQASICTEWAHERLVLKQGQQNAAQLKLSKENNIKKSTFHQELDSLHELQTNSYKPAASKA-------------PRTIHRCILKTSSKTKDPKNRNLECHVCNTSYCNYNTYFTHLIDNTCMK 856
[Close]
BLAST of EMLSAG00000001535 vs. C. finmarchicus
Match: gi|592934168|gb|GAXK01024385.1| (TSA: Calanus finmarchicus comp484170_c1_seq4 transcribed RNA sequence)

HSP 1 Score: 80.4925 bits (197), Expect = 3.887e-15
Identity = 53/159 (33.33%), Postives = 78/159 (49.06%), Query Frame = 0 
Query:   56 QQESSRVSSILTERPPVTSNNFHKQIASKSCTIWIHLQANISTEWEQNSIVINNPKTTAATKIGSKTLTKVPFSIQKTFXXXXXXXXXXIKIEASTIPEGRHMDENDSFNPKTVHRCILQTSDKSKYSKSFVLECHVCHWEYSSYDKYFKHLIELHCAR 214
            Q  +   S+ LT  PP  S +  ++    SC +WIHLQA+I TEW    +V+   +  AA    SK       +  +   +   +  +  K  AS               P+T+HRCIL+TS K+K  K+  LECHVC+  Y +Y+ YF HLI+  C +
Sbjct:  425 QLNAQATSTPLTISPPSNSKSDIRR--GVSCIMWIHLQASICTEWAHERLVLKQGQQNAAQLKLSKENNIKKSTFHQELDSLHELQTNSYKPAASKA-------------PRTIHRCILKTSSKTKDPKNRNLECHVCNTSYCNYNTYFTHLIDNTCMK 856

HSP 2 Score: 54.6842 bits (130), Expect = 4.824e-7
Identity = 34/124 (27.42%), Postives = 61/124 (49.19%), Query Frame = 0 
Query:  352 VYCPHWASKYLPALSVNDNVNDEITLSELRAQITKLLLLVFGEEKLTVELGYPVKDVFEILETASLVYGRIENVYSEIDACRVECQRQTKENSTSTSYFITQLKYRLLKRRINSIKKNILKFIK 475
            V CP  A++ L  ++  +N  DE+  ++  A++T +L  + GE +L  +LG+P     E+LE    + G    +  E D C   C+ Q  ++         Q  +R LK R+ +++ N   F+K
Sbjct: 1514 VLCPCEAARRLDNITNEENSKDELKFADFAAKLTVVLTQLLGERRLD-QLGFPATSGKEVLEKVLRLTGTT--ITREDDLCTETCKEQKDKD--------VQRNFRFLKSRLIALEMNTEAFLK 1852
[Close]
BLAST of EMLSAG00000001535 vs. C. finmarchicus
Match: gi|592934169|gb|GAXK01024384.1| (TSA: Calanus finmarchicus comp484170_c1_seq3 transcribed RNA sequence)

HSP 1 Score: 80.4925 bits (197), Expect = 4.010e-15
Identity = 53/159 (33.33%), Postives = 78/159 (49.06%), Query Frame = 0 
Query:   56 QQESSRVSSILTERPPVTSNNFHKQIASKSCTIWIHLQANISTEWEQNSIVINNPKTTAATKIGSKTLTKVPFSIQKTFXXXXXXXXXXIKIEASTIPEGRHMDENDSFNPKTVHRCILQTSDKSKYSKSFVLECHVCHWEYSSYDKYFKHLIELHCAR 214
            Q  +   S+ LT  PP  S +  ++    SC +WIHLQA+I TEW    +V+   +  AA    SK       +  +   +   +  +  K  AS               P+T+HRCIL+TS K+K  K+  LECHVC+  Y +Y+ YF HLI+  C +
Sbjct:  425 QLNAQATSTPLTISPPSNSKSDIRR--GVSCIMWIHLQASICTEWAHERLVLKQGQQNAAQLKLSKENNIKKSTFHQELDSLHELQTNSYKPAASKA-------------PRTIHRCILKTSSKTKDPKNRNLECHVCNTSYCNYNTYFTHLIDNTCMK 856

HSP 2 Score: 54.6842 bits (130), Expect = 4.284e-7
Identity = 34/124 (27.42%), Postives = 61/124 (49.19%), Query Frame = 0 
Query:  352 VYCPHWASKYLPALSVNDNVNDEITLSELRAQITKLLLLVFGEEKLTVELGYPVKDVFEILETASLVYGRIENVYSEIDACRVECQRQTKENSTSTSYFITQLKYRLLKRRINSIKKNILKFIK 475
            V CP  A++ L  ++  +N  DE+  ++  A++T +L  + GE +L  +LG+P     E+LE    + G    +  E D C   C+ Q  ++         Q  +R LK R+ +++ N   F+K
Sbjct: 1526 VLCPCEAARRLDNITNEENSKDELKFADFAAKLTVVLTQLLGERRLD-QLGFPATSGKEVLEKVLRLTGTT--ITREDDLCTETCKEQKDKD--------VQRNFRFLKSRLIALEMNTEAFLK 1864
[Close]
BLAST of EMLSAG00000001535 vs. C. finmarchicus
Match: gi|592934167|gb|GAXK01024386.1| (TSA: Calanus finmarchicus comp484170_c1_seq5 transcribed RNA sequence)

HSP 1 Score: 78.9518 bits (193), Expect = 5.070e-15
Identity = 46/132 (34.85%), Postives = 67/132 (50.76%), Query Frame = 0 
Query:   83 SKSCTIWIHLQANISTEWEQNSIVINNPKTTAATKIGSKTLTKVPFSIQKTFXXXXXXXXXXIKIEASTIPEGRHMDENDSFNPKTVHRCILQTSDKSKYSKSFVLECHVCHWEYSSYDKYFKHLIELHCAR 214
             +SC +WIHLQA+I TEW    +V+   +  AA    SK       +  +   +   +  +  K  AS               P+T+HRCIL+TS K+K  K+  LECHVC+  Y +Y+ YF HLI+  C +
Sbjct:  529 GESCIMWIHLQASICTEWAHERLVLKQGQQNAAQLKLSKENNIKKSTFHQELDSLHELQTNSYKPAASKA-------------PRTIHRCILKTSSKTKDPKNRNLECHVCNTSYCNYNTYFTHLIDNTCMK 885
[Close]
BLAST of EMLSAG00000001535 vs. C. finmarchicus
Match: gi|592934171|gb|GAXK01024382.1| (TSA: Calanus finmarchicus comp484170_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 79.337 bits (194), Expect = 8.187e-15
Identity = 46/132 (34.85%), Postives = 67/132 (50.76%), Query Frame = 0 
Query:   83 SKSCTIWIHLQANISTEWEQNSIVINNPKTTAATKIGSKTLTKVPFSIQKTFXXXXXXXXXXIKIEASTIPEGRHMDENDSFNPKTVHRCILQTSDKSKYSKSFVLECHVCHWEYSSYDKYFKHLIELHCAR 214
             +SC +WIHLQA+I TEW    +V+   +  AA    SK       +  +   +   +  +  K  AS               P+T+HRCIL+TS K+K  K+  LECHVC+  Y +Y+ YF HLI+  C +
Sbjct:  529 GESCIMWIHLQASICTEWAHERLVLKQGQQNAAQLKLSKENNIKKSTFHQELDSLHELQTNSYKPAASKA-------------PRTIHRCILKTSSKTKDPKNRNLECHVCNTSYCNYNTYFTHLIDNTCMK 885

HSP 2 Score: 54.299 bits (129), Expect = 6.048e-7
Identity = 35/128 (27.34%), Postives = 62/128 (48.44%), Query Frame = 0 
Query:  348 INDSVYCPHWASKYLPALSVNDNVNDEITLSELRAQITKLLLLVFGEEKLTVELGYPVKDVFEILETASLVYGRIENVYSEIDACRVECQRQTKENSTSTSYFITQLKYRLLKRRINSIKKNILKFIK 475
             N  V CP  A++ L  ++  +N  DE+  ++  A++T +L  + GE +L  +LG+P     E+LE    + G    +  E D C   C+ Q  ++         Q  +R LK R+ +++ N   F+K
Sbjct: 1543 FNLPVLCPCEAARRLDNITNEENSKDELKFADFAAKLTVVLTQLLGERRLD-QLGFPATSGKEVLEKVLRLTGTT--ITREDDLCTETCKEQKDKD--------VQRNFRFLKSRLIALEMNTEAFLK 1893
[Close]
BLAST of EMLSAG00000001535 vs. C. finmarchicus
Match: gi|592934170|gb|GAXK01024383.1| (TSA: Calanus finmarchicus comp484170_c1_seq2 transcribed RNA sequence)

HSP 1 Score: 79.337 bits (194), Expect = 8.515e-15
Identity = 46/132 (34.85%), Postives = 67/132 (50.76%), Query Frame = 0 
Query:   83 SKSCTIWIHLQANISTEWEQNSIVINNPKTTAATKIGSKTLTKVPFSIQKTFXXXXXXXXXXIKIEASTIPEGRHMDENDSFNPKTVHRCILQTSDKSKYSKSFVLECHVCHWEYSSYDKYFKHLIELHCAR 214
             +SC +WIHLQA+I TEW    +V+   +  AA    SK       +  +   +   +  +  K  AS               P+T+HRCIL+TS K+K  K+  LECHVC+  Y +Y+ YF HLI+  C +
Sbjct:  529 GESCIMWIHLQASICTEWAHERLVLKQGQQNAAQLKLSKENNIKKSTFHQELDSLHELQTNSYKPAASKA-------------PRTIHRCILKTSSKTKDPKNRNLECHVCNTSYCNYNTYFTHLIDNTCMK 885

HSP 2 Score: 54.299 bits (129), Expect = 7.052e-7
Identity = 35/128 (27.34%), Postives = 62/128 (48.44%), Query Frame = 0 
Query:  348 INDSVYCPHWASKYLPALSVNDNVNDEITLSELRAQITKLLLLVFGEEKLTVELGYPVKDVFEILETASLVYGRIENVYSEIDACRVECQRQTKENSTSTSYFITQLKYRLLKRRINSIKKNILKFIK 475
             N  V CP  A++ L  ++  +N  DE+  ++  A++T +L  + GE +L  +LG+P     E+LE    + G    +  E D C   C+ Q  ++         Q  +R LK R+ +++ N   F+K
Sbjct: 1531 FNLPVLCPCEAARRLDNITNEENSKDELKFADFAAKLTVVLTQLLGERRLD-QLGFPATSGKEVLEKVLRLTGTT--ITREDDLCTETCKEQKDKD--------VQRNFRFLKSRLIALEMNTEAFLK 1881
[Close]
BLAST of EMLSAG00000001535 vs. C. finmarchicus
Match: gi|592934164|gb|GAXK01024389.1| (TSA: Calanus finmarchicus comp484170_c1_seq8 transcribed RNA sequence)

HSP 1 Score: 35.8094 bits (81), Expect = 7.667e-2
Identity = 19/45 (42.22%), Postives = 27/45 (60.00%), Query Frame = 0 
Query:   56 QQESSRVSSILTERPPVTSNNFHKQIASKSCTIWIHLQANISTEW 100
            Q ++   S+ LT  PP  S +  ++    SC +WIHLQA+I TEW
Sbjct:  236 QLDAQATSTPLTISPPSNSKSDIRR--GVSCIMWIHLQASICTEW 364
[Close]
BLAST of EMLSAG00000001535 vs. C. finmarchicus
Match: gi|592808898|gb|GAXK01145670.1| (TSA: Calanus finmarchicus comp1303984_c0_seq6 transcribed RNA sequence)

HSP 1 Score: 30.8018 bits (68), Expect = 4.312e+0
Identity = 16/61 (26.23%), Postives = 36/61 (59.02%), Query Frame = 0 
Query:  175 QTSDKSKYSKSFVLECHVCHWEYSSYDKYFKHLIELHCARQKVLSNMKKQCREMPYDKEAY 235
            ++S+ +K  + F+  C+ C++EYSSY  + +H+ ++H  + ++ +  K   + M Y +  Y
Sbjct:   46 KSSESTKVQERFI--CNSCNYEYSSYQYWLEHMSKVHGIKDELQN--KPSVKRMRYGESQY 216
[Close]
BLAST of EMLSAG00000001535 vs. C. finmarchicus
Match: gi|592955048|gb|GAXK01003505.1| (TSA: Calanus finmarchicus comp2155099_c0_seq3 transcribed RNA sequence)

HSP 1 Score: 31.5722 bits (70), Expect = 7.530e+0
Identity = 21/55 (38.18%), Postives = 29/55 (52.73%), Query Frame = 0 
Query:  423 ENVYSEIDACRVECQRQTKENSTSTSYFITQLKY-RLLKRRINSIKKNILKFIKS 476
            +N + E  A     +   +E  TS +YF+  LKY + LK  I  I  NI KF+KS
Sbjct: 1069 KNSFDETQAKITGREDINRELETSVAYFVQFLKYSKALKVMIIGIGDNITKFVKS 1233
[Close]
BLAST of EMLSAG00000001535 vs. L. salmonis peptides
Match: EMLSAP00000001535 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1266:54680:56964:1 gene:EMLSAG00000001535 transcript:EMLSAT00000001535 description:"maker-LSalAtl2s1266-augustus-gene-0.9")

HSP 1 Score: 996.497 bits (2575), Expect = 0.000e+0
Identity = 485/485 (100.00%), Postives = 485/485 (100.00%), Query Frame = 0 
Query:    1 MALSLCGELKESFIVPVLPPHHPQNHQFPIKLIAKRSKGQDRKLNVQKNEENTILQQESSRVSSILTERPPVTSNNFHKQIASKSCTIWIHLQANISTEWEQNSIVINNPKTTAATKIGSKTLTKVPFSIQKTFTTPTSMTMSPIKIEASTIPEGRHMDENDSFNPKTVHRCILQTSDKSKYSKSFVLECHVCHWEYSSYDKYFKHLIELHCARQKVLSNMKKQCREMPYDKEAYHKKKRHYQLSQDTSLLDQSNQLKYVEEYPLENGPKDKYQIRELKRKKEEIEEENVPLNLSSKKSNLLLLKEGSQDPVLTSSIVENEIFRHNKESVRKLTSNLQKTIIFYPETINDSVYCPHWASKYLPALSVNDNVNDEITLSELRAQITKLLLLVFGEEKLTVELGYPVKDVFEILETASLVYGRIENVYSEIDACRVECQRQTKENSTSTSYFITQLKYRLLKRRINSIKKNILKFIKSLPFFYDLSS 485
            MALSLCGELKESFIVPVLPPHHPQNHQFPIKLIAKRSKGQDRKLNVQKNEENTILQQESSRVSSILTERPPVTSNNFHKQIASKSCTIWIHLQANISTEWEQNSIVINNPKTTAATKIGSKTLTKVPFSIQKTFTTPTSMTMSPIKIEASTIPEGRHMDENDSFNPKTVHRCILQTSDKSKYSKSFVLECHVCHWEYSSYDKYFKHLIELHCARQKVLSNMKKQCREMPYDKEAYHKKKRHYQLSQDTSLLDQSNQLKYVEEYPLENGPKDKYQIRELKRKKEEIEEENVPLNLSSKKSNLLLLKEGSQDPVLTSSIVENEIFRHNKESVRKLTSNLQKTIIFYPETINDSVYCPHWASKYLPALSVNDNVNDEITLSELRAQITKLLLLVFGEEKLTVELGYPVKDVFEILETASLVYGRIENVYSEIDACRVECQRQTKENSTSTSYFITQLKYRLLKRRINSIKKNILKFIKSLPFFYDLSS
Sbjct:    1 MALSLCGELKESFIVPVLPPHHPQNHQFPIKLIAKRSKGQDRKLNVQKNEENTILQQESSRVSSILTERPPVTSNNFHKQIASKSCTIWIHLQANISTEWEQNSIVINNPKTTAATKIGSKTLTKVPFSIQKTFTTPTSMTMSPIKIEASTIPEGRHMDENDSFNPKTVHRCILQTSDKSKYSKSFVLECHVCHWEYSSYDKYFKHLIELHCARQKVLSNMKKQCREMPYDKEAYHKKKRHYQLSQDTSLLDQSNQLKYVEEYPLENGPKDKYQIRELKRKKEEIEEENVPLNLSSKKSNLLLLKEGSQDPVLTSSIVENEIFRHNKESVRKLTSNLQKTIIFYPETINDSVYCPHWASKYLPALSVNDNVNDEITLSELRAQITKLLLLVFGEEKLTVELGYPVKDVFEILETASLVYGRIENVYSEIDACRVECQRQTKENSTSTSYFITQLKYRLLKRRINSIKKNILKFIKSLPFFYDLSS 485
[Close]
BLAST of EMLSAG00000001535 vs. L. salmonis peptides
Match: EMLSAP00000003533 (pep:novel supercontig:LSalAtl2s:LSalAtl2s193:304110:332546:-1 gene:EMLSAG00000003533 transcript:EMLSAT00000003533 description:"maker-LSalAtl2s193-augustus-gene-3.7")

HSP 1 Score: 53.9138 bits (128), Expect = 6.692e-8
Identity = 56/200 (28.00%), Postives = 86/200 (43.00%), Query Frame = 0 
Query:  304 LKEGSQDPVLTSS----------------------IVENEIFRHNKESVRKLTSNLQKTIIFYPETIN-------DSVYCPHWASKYLPALSVNDNVNDEITLSELRAQITKLLLLVFGEEKLTVELGYPVKDVFEILETASLVYGRIENVYSEIDACRVECQRQTKENSTSTSYFITQLKYRLLKRRINSIKKNILKFI 474
            LK+ S+DPVLT++                      IV NE    N      L+S+     IF  E +        ++  CPH +   LP++  ++   D++ L  L+AQ+  +L  + G  KL VE  Y    V +IL    L    I+ V  E   C  EC      NS  +S    +L  R++K R++ I+ NI K +
Sbjct:  398 LKDCSRDPVLTATSGFVIPVTVTADSGKINGSFEDIVNNESLILNG----NLSSDATTETIFEEENLRLIFENNFETQLCPHKSVLQLPSIPASEQARDQLKLVTLQAQLGYILTGLLGYSKLNVEYDYSRSSVHQILHKI-LAQSNIKPV-EENYLCNAEC------NSIVSSLDKKELFLRIIKLRLHVIRANIGKLL 585
[Close]
BLAST of EMLSAG00000001535 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold346_size200932-snap-gene-1.19 (protein:Tk04305 transcript:maker-scaffold346_size200932-snap-gene-1.19-mRNA-1 annotation:"sporulation protein")

HSP 1 Score: 103.99 bits (258), Expect = 7.577e-24
Identity = 58/153 (37.91%), Postives = 85/153 (55.56%), Query Frame = 0 
Query:   64 SILTERPPVTSNNFHKQIASKSCTIWIHLQANISTEWEQNSIVINNPKTTAATKIGSKTLTKVPFSIQKTFTTPTSMTMSPIKIEASTIPEGRHMDENDSFNPKTVHRCILQTSDKSKYSKSFVLECHVCHWEYSSYDKYFKHLIELHCARQK 216
            +++T  PP+ S    K    K C +W+HL + I TEW QNS+V+     +  T+IG++ +T             T+   S ++  A T  + +H        PKT+HRCILQ +++SK S + + ECHVC   Y SYDKYF HLI+  CA+QK
Sbjct:   66 TMITSTPPIVSTRAMKA-KEKGCYMWVHLLSTICTEWAQNSMVL-----SPGTQIGARVMTTA---------NKTNEVTSILQALAGT--DHQHASNPVEKQPKTIHRCILQRANRSKTSSNRI-ECHVCEASYPSYDKYFTHLIDTTCAKQK 200

HSP 2 Score: 68.5514 bits (166), Expect = 1.894e-12
Identity = 38/122 (31.15%), Postives = 68/122 (55.74%), Query Frame = 0 
Query:  354 CPHWASKYLPALSVNDNVNDEITLSELRAQITKLLLLVFGEEKLTVELGYPVKDVFEILETASLVYGRIENVYSEIDACRVECQRQTKENSTSTSYFITQLKYRLLKRRINSIKKNILKFIK 475
            CPH  +  LPA+S+ ++ +DE  L+ L+ Q+T L++ + GE ++T ++GYP  D+  +L+T  ++      V S  D C   CQ               QL++R LKR++ + ++NI  F++
Sbjct:  430 CPHIEAATLPAVSLLEHASDEARLATLKVQLTNLMVTLLGEARIT-QMGYPDTDILAVLKT--VLSDAPSRVASISDDCTESCQCFGDS---------LQLRFRKLKRKLLTTRRNIQSFLE 539
The following BLAST results are available for this feature:
BLAST of EMLSAG00000001535 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001535 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 9
Match NameE-valueIdentityDescription
gi|592934166|gb|GAXK01024387.1|1.787e-1533.33TSA: Calanus finmarchicus comp484170_c1_seq6 trans... [more]
gi|592934168|gb|GAXK01024385.1|3.887e-1533.33TSA: Calanus finmarchicus comp484170_c1_seq4 trans... [more]
gi|592934169|gb|GAXK01024384.1|4.010e-1533.33TSA: Calanus finmarchicus comp484170_c1_seq3 trans... [more]
gi|592934167|gb|GAXK01024386.1|5.070e-1534.85TSA: Calanus finmarchicus comp484170_c1_seq5 trans... [more]
gi|592934171|gb|GAXK01024382.1|8.187e-1534.85TSA: Calanus finmarchicus comp484170_c1_seq1 trans... [more]
gi|592934170|gb|GAXK01024383.1|8.515e-1534.85TSA: Calanus finmarchicus comp484170_c1_seq2 trans... [more]
gi|592934164|gb|GAXK01024389.1|7.667e-242.22TSA: Calanus finmarchicus comp484170_c1_seq8 trans... [more]
gi|592808898|gb|GAXK01145670.1|4.312e+026.23TSA: Calanus finmarchicus comp1303984_c0_seq6 tran... [more]
gi|592955048|gb|GAXK01003505.1|7.530e+038.18TSA: Calanus finmarchicus comp2155099_c0_seq3 tran... [more]
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BLAST of EMLSAG00000001535 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAP000000015350.000e+0100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1266:5468... [more]
EMLSAP000000035336.692e-828.00pep:novel supercontig:LSalAtl2s:LSalAtl2s193:30411... [more]
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BLAST of EMLSAG00000001535 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001535 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001535 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001535 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 1
Match NameE-valueIdentityDescription
maker-scaffold346_size200932-snap-gene-1.197.577e-2437.91protein:Tk04305 transcript:maker-scaffold346_size2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1266supercontigLSalAtl2s1266:54680..56964 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s1266-augustus-gene-0.9
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000001535 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000001535EMLSAT00000001535-697382Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s1266:54680..56964+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000001535-684301 ID=EMLSAG00000001535-684301|Name=EMLSAG00000001535|organism=Lepeophtheirus salmonis|type=gene|length=2285bp|location=Sequence derived from alignment at LSalAtl2s1266:54680..56964+ (Lepeophtheirus salmonis)
GGGGGAGCCTATTTTTGATAACAGTACAAGATATCAGAGACCATTACTCT
TACAAATTAGAGAATCTATAGCATTATATTTTATTTCTCCGTAATGAACA
CAAGGTATGGCACTCTCTCTCTGTGGAGAACTAAAAGAAAGTTTTATTGT
TCCCGTGCTACCTCCTCATCATCCTCAAAACCATCAATTCCCAATTAAAC
TTATCGCGAAACGAAGTAAAGGACAAGACAGAAAGTTAAACGTACAAAAG
AACGAAGAAAATACCATATTACAACAGGAGTCCAGCAGGGTATCTAGCAT
TCTGACAGAAAGRCCGCCTGTCACGTCCAATAATTTTCATAAACAAATCG
CAAGTAAAAGTTGCACCATCTGGATACATTTGCAGGCCAACATTTCAACA
GAATGGGAACAAAATTCCATTGTCATAAATAACCCAAAAACAACAGCGGC
AACAAAAATTGGATCTAAAACACTGACAAAAGTGCCTTTCTCTATTCAAA
AAACGTTTACCACTCCTACAAGTATGACTATGTCACCTATAAAGATTGAA
GCTTCCACTATACCTGAAGTAAGAACAAGATATTAAAAACTCTAATCTTT
AATTAAAATTTGGAGAAAAAAAATAATTATTTTATTAAAATTAATAGGAT
ATGAGAAAACTATAAAAAAATATTATCCACGTGGCGTCACCACTATAGCA
ATAAGTCCCTTATGAACAAAAATAATTTATATTATGTAGTGTGTTTTAAT
CTCTTAGCCGCCAAAAAGGCAACACTATTCTTGGTTATATTAAAAAACTG
CTATAAAGTAAATAAGGCACATATCCCATTACTAATTAGGGCCAATTATA
CCATATGTGGAGCCTTTTTAAAGGGGCACATTTTATTTTTTTTTGTTGCT
AAAATTAAAAAAAAAATAATGAACTTTAAAGAAATAACTATTAGGCCCAA
AACATTGGTGGCCTGGCTCGATTTTCACAGGGCGAGGTACATTATTGTCC
CTAGAATAAAGGTTTACAAAATTTTCTATTGTTTCTATCTTAAAATATGC
TACTTTTTTTATTGTTTTCTGAAACATGCCACACCCTAAAATATGCTTCC
CATTGAAAATATTCAACCCTTCCCTCTCACTGGTTGGGCTCTTTATTTTT
ATATTTCATTTCAAGACCAGAGGTCTCTCTTACCCATAATACGCATAAAA
CTAACCATGAGTGAGTGTATAATTTGCTTAATTTTCAATATATTTGGTTT
ACAGGGTCGTCACATGGATGAGAACGATAGTTTTAATCCAAAAACTGTAC
ATAGGTGTATATTACAAACGTCTGATAAATCCAAGTATTCCAAATCATTT
GTCCTGGAGTGTCACGTGTGCCACTGGGAATATTCTAGTTATGACAAATA
CTTTAAACATTTAATCGAACTTCATTGCGCACGTCAAAAAGTCTTGTCGA
ATATGAAGAAACAATGCCGAGAAATGCCTTATGATAAGGAAGCATATCAT
AAGAAAAAGAGACATTATCAACTATCTCAAGACACTTCTCTATTGGATCA
ATCAAATCAGTTGAAATATGTTGAGGAATATCCTTTAGAAAATGGCCCAA
AAGACAAATACCAAATAAGGGAATTAAAGAGGAAAAAGGAAGAGATTGAG
GAAGAAAACGTTCCGTTAAACCTATCCTCCAAAAAAAGTAATTTACTCCT
ATTGAAAGAAGGGAGTCAAGACCCAGTGCTCACGAGCAGTATTGTCGAGA
ATGAGATATTTCGACATAATAAAGAATCTGTAAGGAAACTTACAAGTAAC
CTTCAAAAAACAATTATATTTTACCCAGAAACAATCAACGACTCCGTCTA
TTGTCCACACTGGGCCTCAAAATATCTTCCCGCTCTTTCCGTGAATGACA
ACGTAAATGATGAAATTACTCTTTCAGAACTTCGAGCACAAATTACAAAA
TTATTGCTCTTAGTTTTTGGAGAGGAAAAATTAACTGTTGAATTGGGCTA
TCCGGTGAAGGATGTTTTTGAAATTCTGGAAACGGCATCTTTAGTTTATG
GAAGGATAGAAAACGTTTATTCAGAGATTGATGCTTGTCGCGTCGAGTGT
CAGAGGCAGACAAAAGAAAATAGTACTTCCACATCATATTTTATTACTCA
GTTAAAATATAGACTATTAAAGCGAAGAATTAATTCCATCAAGAAGAACA
TTCTTAAGTTTATCAAGAGTTTACCCTTTTTCTATGATTTGTCATCGTAA
AGTGTATGTACATAATAAATCGTATTTTATCCTAA
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