EMLSAG00000002185, EMLSAG00000002185-684951 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000002185 vs. C. finmarchicus
Match: gi|592829268|gb|GAXK01128276.1| (TSA: Calanus finmarchicus comp10479615_c0_seq1 transcribed RNA sequence) HSP 1 Score: 34.2686 bits (77), Expect = 7.173e-2 Identity = 21/71 (29.58%), Postives = 38/71 (53.52%), Query Frame = 0 Query: 128 FVDQLIEDIRKEAMKDQTYKDLVNAVEDNYINDSVQQFSKILNDLSTKNGLVLYGNRVVIPKERQVQVLQG 198 + QL+EDI++ ++ + + DS F + ++LS + +V+ G+RVVIPK +V VL+ Sbjct: 132 ILQQLVEDIKQGKLRKE-------------LGDS--GFKECFSELSIQKEVVMRGDRVVIPKTLKVDVLEA 299
BLAST of EMLSAG00000002185 vs. C. finmarchicus
Match: gi|592775618|gb|GAXK01178950.1| (TSA: Calanus finmarchicus comp14471_c41_seq4 transcribed RNA sequence) HSP 1 Score: 35.039 bits (79), Expect = 1.634e-1 Identity = 19/70 (27.14%), Postives = 38/70 (54.29%), Query Frame = 0 Query: 134 EDIRKEAMKDQTYKDLVNAVEDNY------INDSVQQFSKILNDLSTKNGLVLYGNRVVIPKERQVQVLQ 197 ++IR+ +DQ+ + L V+ + + +QQ+ + L+ +G++LY +R VIP + +VLQ Sbjct: 1863 DEIRQLTGRDQSLQSLSKLVQSAFPEKRSDLPPELQQYWTSRSGLTVHDGVLLYNDRTVIPPSARPRVLQ 2072
BLAST of EMLSAG00000002185 vs. C. finmarchicus
Match: gi|592775726|gb|GAXK01178842.1| (TSA: Calanus finmarchicus comp14471_c19_seq7 transcribed RNA sequence) HSP 1 Score: 35.039 bits (79), Expect = 1.640e-1 Identity = 19/70 (27.14%), Postives = 38/70 (54.29%), Query Frame = 0 Query: 134 EDIRKEAMKDQTYKDLVNAVEDNY------INDSVQQFSKILNDLSTKNGLVLYGNRVVIPKERQVQVLQ 197 ++IR+ +DQ+ + L V+ + + +QQ+ + L+ +G++LY +R VIP + +VLQ Sbjct: 128 DEIRQLTGRDQSLQSLSKLVQSAFPEKRSDLPPELQQYWTSRSGLTVHDGVLLYNDRTVIPPSARPRVLQ 337
BLAST of EMLSAG00000002185 vs. C. finmarchicus
Match: gi|592775724|gb|GAXK01178844.1| (TSA: Calanus finmarchicus comp14471_c19_seq9 transcribed RNA sequence) HSP 1 Score: 35.039 bits (79), Expect = 1.642e-1 Identity = 19/70 (27.14%), Postives = 38/70 (54.29%), Query Frame = 0 Query: 134 EDIRKEAMKDQTYKDLVNAVEDNY------INDSVQQFSKILNDLSTKNGLVLYGNRVVIPKERQVQVLQ 197 ++IR+ +DQ+ + L V+ + + +QQ+ + L+ +G++LY +R VIP + +VLQ Sbjct: 155 DEIRQLTGRDQSLQSLSKLVQSAFPEKRSDLPPELQQYWTSRSGLTVHDGVLLYNDRTVIPPSARPRVLQ 364
BLAST of EMLSAG00000002185 vs. C. finmarchicus
Match: gi|592909130|gb|GAXK01049245.1| (TSA: Calanus finmarchicus comp2194516_c0_seq1 transcribed RNA sequence) HSP 1 Score: 30.4166 bits (67), Expect = 5.544e+0 Identity = 39/144 (27.08%), Postives = 71/144 (49.31%), Query Frame = 0 Query: 40 ALVPQLGTTIKEEFFVSKNIEPSTLSTLIKLSIHYHEWKYHEVPDALSRSPVSRPKED-EKLDRDVEYHRGQVI----RVAGIRATHLKGEEIFVDQLIEDIRKEAMKDQTYKDLVNAVEDNYINDSVQQFSKILNDLSTKNGL 178 A++ LG +K + F ++E S+L T++ +E K E + +SR KED +K + + + V + I+ H +G +DQ DI K+ +K+Q+ + +A + N+I DS + ++ D+STK L Sbjct: 339 AIMNDLGIKMKIKSFKG-DLENSSLRTIL------NEPKAKEGKKGNDLNNISRSKEDLQKSPKTSDIFKAAVSTAHENIPFIKKIHTEG---ILDQ---DIHKKKLKNQSKQIETSATKPNFIRDSERNSNENTIDVSTKTKL 731
BLAST of EMLSAG00000002185 vs. C. finmarchicus
Match: gi|592942977|gb|GAXK01015576.1| (TSA: Calanus finmarchicus comp1032146_c0_seq3 transcribed RNA sequence) HSP 1 Score: 29.261 bits (64), Expect = 6.788e+0 Identity = 16/48 (33.33%), Postives = 25/48 (52.08%), Query Frame = 0 Query: 138 KEAMKDQTYKDLVNAVED--------NYINDSVQQFSKILNDLSTKNG 177 K+A DQ+ D++ + + N+IND ++Q SKI DL G Sbjct: 247 KKAECDQSLPDILERIGNVEKKVASLNHINDKIEQLSKITYDLKRSTG 390
BLAST of EMLSAG00000002185 vs. C. finmarchicus
Match: gi|592942978|gb|GAXK01015575.1| (TSA: Calanus finmarchicus comp1032146_c0_seq2 transcribed RNA sequence) HSP 1 Score: 29.261 bits (64), Expect = 7.684e+0 Identity = 16/48 (33.33%), Postives = 25/48 (52.08%), Query Frame = 0 Query: 138 KEAMKDQTYKDLVNAVED--------NYINDSVQQFSKILNDLSTKNG 177 K+A DQ+ D++ + + N+IND ++Q SKI DL G Sbjct: 247 KKAECDQSLPDILERIGNVEKKVASLNHINDKIEQLSKITYDLKRSTG 390
BLAST of EMLSAG00000002185 vs. L. salmonis peptides
Match: EMLSAP00000002185 (pep:novel supercontig:LSalAtl2s:LSalAtl2s13:762719:798874:-1 gene:EMLSAG00000002185 transcript:EMLSAT00000002185 description:"augustus-LSalAtl2s13-processed-gene-9.1") HSP 1 Score: 439.884 bits (1130), Expect = 2.463e-158 Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0 Query: 1 MMKTTYCVFVQDISFKKEERRRRFWNIRFSIYSYLWFFLALVPQLGTTIKEEFFVSKNIEPSTLSTLIKLSIHYHEWKYHEVPDALSRSPVSRPKEDEKLDRDVEYHRGQVIRVAGIRATHLKGEEIFVDQLIEDIRKEAMKDQTYKDLVNAVEDNYINDSVQQFSKILNDLSTKNGLVLYGNRVVIPKERQVQVLQGIAQFTSRYREDEKKS 213 MMKTTYCVFVQDISFKKEERRRRFWNIRFSIYSYLWFFLALVPQLGTTIKEEFFVSKNIEPSTLSTLIKLSIHYHEWKYHEVPDALSRSPVSRPKEDEKLDRDVEYHRGQVIRVAGIRATHLKGEEIFVDQLIEDIRKEAMKDQTYKDLVNAVEDNYINDSVQQFSKILNDLSTKNGLVLYGNRVVIPKERQVQVLQGIAQFTSRYREDEKKS Sbjct: 1 MMKTTYCVFVQDISFKKEERRRRFWNIRFSIYSYLWFFLALVPQLGTTIKEEFFVSKNIEPSTLSTLIKLSIHYHEWKYHEVPDALSRSPVSRPKEDEKLDRDVEYHRGQVIRVAGIRATHLKGEEIFVDQLIEDIRKEAMKDQTYKDLVNAVEDNYINDSVQQFSKILNDLSTKNGLVLYGNRVVIPKERQVQVLQGIAQFTSRYREDEKKS 213
BLAST of EMLSAG00000002185 vs. nr
Match: gi|1022775365|gb|KZS19237.1| (Uncharacterized protein APZ42_014385 [Daphnia magna]) HSP 1 Score: 80.8777 bits (198), Expect = 3.855e-14 Identity = 55/161 (34.16%), Postives = 84/161 (52.17%), Query Frame = 0 Query: 74 YHEWKYHEVPDALSRSPVSRP-KEDEKLDRDVE-YHRGQVIR-VAGIRATH----------LKGEEIFVDQLIEDIRKEAMKDQTYKDLVNAVEDNY------INDSVQQFSKILNDLSTKNGLVLYGNRVVIPKERQVQVL-------QGIAQFTSRYRE 208 + +W H +PDALSR+PV+ P EDE + DV+ + R +R VA I AT L + D +I+ +R+ A D Y +L++AVE + SV+Q+ I +LS +GLVL+G R+VIP+ + +L QGI + R R+ Sbjct: 718 WRKWLDHAIPDALSRAPVNDPGPEDEAANDDVQAFARTMTLRRVAAITATSSDDDDQSEPSLDSPSVRRDMVIDSLREVAAVDAAYWELIDAVESGFSTRHDMTAPSVRQYWTIRQELSVDDGLVLFGKRIVIPQRSRRDILAKLHVAHQGIVRMKRRARQ 878
BLAST of EMLSAG00000002185 vs. nr
Match: gi|1022767061|gb|KZS11960.1| (Uncharacterized protein APZ42_023219 [Daphnia magna]) HSP 1 Score: 75.8702 bits (185), Expect = 1.775e-12 Identity = 48/153 (31.37%), Postives = 83/153 (54.25%), Query Frame = 0 Query: 74 YHEWKYHEVPDALSRSPVSRP-KEDEKLDRDVEYHRGQVIRVAGIRATHL----KGEEIFVDQLIEDIRKEAMKDQTYKDLVNAVEDNYIN------DSVQQFSKILNDLSTKNGLVLYGNRVVIPKERQVQVL-------QGIAQFTSRYRE 208 + + K H +PDALSR+PV+ P K+DE + ++ Y Q + HL +G + VD L+ ++R A D Y DL+ AVE + + D V+QF I + L+ ++G++L+G+R+V+P + ++L QGI + R ++ Sbjct: 924 WRKGKDHAIPDALSRAPVNDPAKDDECVGTELAYSIQQAVIQNVNTICHLDDESEGPDQLVDSLLLELRSAATTDSKYADLIKAVESGFPSSRQQYPDHVRQFWSIRHQLAVEDGIILFGSRIVVPLAARREILRKLHSAHQGIVRTKRRAQQ 1076
BLAST of EMLSAG00000002185 vs. nr
Match: gi|1022755988|gb|KZS02847.1| (Uncharacterized protein APZ42_034555 [Daphnia magna]) HSP 1 Score: 72.0182 bits (175), Expect = 3.963e-11 Identity = 60/203 (29.56%), Postives = 96/203 (47.29%), Query Frame = 0 Query: 37 FFLALVPQLGTTIKEEFFVSKNIEPSTLSTLIKLS--IHYHEWK---YHEVPDALSRSPVSRP-KEDEKLDRDVE-YHRGQVIRVAGIRATHLKGEEI-----------FVDQLIEDIRKEAMKDQTYKDLVNAVEDNYI------NDSVQQFSKILNDLSTKNGLVLYGNRVVIPKERQVQVL-------QGIAQFTSRYRE 208 F L + Q TI ++F + P +LS I W+ +H +PDALSR+PV+ P +DE +++ + R V R + A H E++ D +++D+R A D Y +L+ A+ D + V+QF K+ DLS +GLVL+G R+V+PK + + L QGI + R R+ Sbjct: 879 FQLVVDHQALVTILDKFTLEAVENPKLQRLKKRLSPFIFTTPWRKEHHHAIPDALSRAPVNDPCPDDEVASTEIQSFSRRVVTRY--VSAMHRTDEDVADSDATEELPHLPDPMLDDLRVAAPSDADYAELIAAIIDGFTVPRHQTAPGVRQFWKMREDLSVDDGLVLFGRRIVVPKSARREFLLKLHAAHQGIVRMKRRARQ 1079
BLAST of EMLSAG00000002185 vs. nr
Match: gi|1022764754|gb|KZS10109.1| (Uncharacterized protein APZ42_025501 [Daphnia magna]) HSP 1 Score: 72.0182 bits (175), Expect = 4.075e-11 Identity = 52/153 (33.99%), Postives = 81/153 (52.94%), Query Frame = 0 Query: 74 YHEWKYHEVPDALSRSPVSRP-KEDEKLDRDVEYH-RGQVIR-VAGIRATH--LKGEEIFVDQLIEDIRKEAMKDQTYKDLVNAVEDNY------INDSVQQFSKILNDLSTKNGLVLYGNRVVIPKERQVQVL-------QGIAQFTSRYRE 208 + K H +PDALSR+PV+ P +DE + ++ + R +IR V I + L + D L+ D++ A D Y+DL+ AVE + + V+QF I + LST +GLVLYG+R+V+P + VL QGI + R ++ Sbjct: 1787 WRRGKDHAIPDALSRAPVNDPVADDECVGEELAFSVRHVIIRSVNAITESEDDLGPQHHLPDNLLTDLQSGAAADPHYRDLIAAVESGFPTNRTLTPNHVRQFWSIRDQLSTDDGLVLYGSRIVVPLALRRNVLTKLHAAHQGIVRTKRRAQQ 1939
BLAST of EMLSAG00000002185 vs. nr
Match: gi|1022769843|gb|KZS14299.1| (Uncharacterized protein APZ42_020375 [Daphnia magna]) HSP 1 Score: 67.3958 bits (163), Expect = 1.668e-9 Identity = 42/129 (32.56%), Postives = 64/129 (49.61%), Query Frame = 0 Query: 74 YHEWKYHEVPDALSRSPVSRPKEDEKLDRDVEYHRGQVIRVAGIRATHLKGEEIFVDQLIEDIRKEAMKDQTYKDLVNAVEDNYI------NDSVQQFSKILNDLSTKNGLVLYGNRVVIPKERQVQVL 196 + + ++H +PDALSR+PV+ P HR A L F D +++D+R A D Y +L+ A+ D + V+QF KI DLS +GLVL+G R+V+PK + + L Sbjct: 755 WRKGRHHAIPDALSRAPVNDP---------TAMHRTDDDVADSDAAEELPH---FPDPMLDDLRVAAASDANYAELIAAIIDGFTVPRHQTASGVRQFWKIREDLSVDDGLVLFGRRIVVPKSARREFL 871
BLAST of EMLSAG00000002185 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold1418_size42454-snap-gene-0.7 (protein:Tk12106 transcript:maker-scaffold1418_size42454-snap-gene-0.7-mRNA-1 annotation:"hypothetical protein ETSY2_42830") HSP 1 Score: 72.4034 bits (176), Expect = 2.348e-15 Identity = 45/135 (33.33%), Postives = 78/135 (57.78%), Query Frame = 0 Query: 87 SRSPVSRPKEDEKLDRDVEYHRGQVIRVAGIRATHLKGEEI-------FVDQLIEDIRKEAMKDQTYKDLVNAVEDNYINDSVQQFSKILNDLSTKNGLVLYGNRVVIPKERQVQVL-------QGIAQFTSRYR 207 R+PV P E++ D + R +I++A + + GEEI VD +++ +R+EA +DQ Y+ LV A+E + ++ + K+L++++T++GLVL+G R+VIPK+ + VL QGI + R R Sbjct: 33 GRAPVQDPGEEDFQDEETLGQRLALIKIA---VSQVVGEEIGKDRMESVVDPILKKLREEAKEDQEYQTLVGAIERADESPLIRPYQKVLHEMATEDGLVLFGARIVIPKKSRKDVLTRLHASHQGIERTKRRAR 164 The following BLAST results are available for this feature:
BLAST of EMLSAG00000002185 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000002185 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 7
BLAST of EMLSAG00000002185 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000002185 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000002185 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000002185 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 5
BLAST of EMLSAG00000002185 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s13:762719..798874- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000002185-684951 ID=EMLSAG00000002185-684951|Name=EMLSAG00000002185|organism=Lepeophtheirus salmonis|type=gene|length=36156bp|location=Sequence derived from alignment at LSalAtl2s13:762719..798874- (Lepeophtheirus salmonis)back to top Add to Basket
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