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Associated RNAi Experiments
Homology
BLAST of EMLSAG00000002302 vs. L. salmonis peptides
Match: EMLSAP00000002302 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1434:74513:78727:-1 gene:EMLSAG00000002302 transcript:EMLSAT00000002302 description:"snap_masked-LSalAtl2s1434-processed-gene-0.17") HSP 1 Score: 178.718 bits (452), Expect = 2.504e-59 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0
Query: 1 MYNFFKHPLNYRQIKKATFQQRSDPNELNLNQGLWKDYREKKPLSSIGDFKITNLKGNQNFDHHNPSKVFILYGIFEFSTMKITNI 86
MYNFFKHPLNYRQIKKATFQQRSDPNELNLNQGLWKDYREKKPLSSIGDFKITNLKGNQNFDHHNPSKVFILYGIFEFSTMKITNI
Sbjct: 1 MYNFFKHPLNYRQIKKATFQQRSDPNELNLNQGLWKDYREKKPLSSIGDFKITNLKGNQNFDHHNPSKVFILYGIFEFSTMKITNI 86
The following BLAST results are available for this feature:
BLAST of EMLSAG00000002302 vs. GO
Analysis Date: 2014-04-02 ( Blast vs. GO)
Total hits: 0
| Match Name | E-value | Identity | Description | |
|---|
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BLAST of EMLSAG00000002302 vs. L. salmonis peptides
Analysis Date: 2014-05-10 ( Blastp vs. self)
Total hits: 1
| Match Name | E-value | Identity | Description | |
|---|
| EMLSAP00000002302 | 2.504e-59 | 100.00 | pep:novel supercontig:LSalAtl2s:LSalAtl2s1434:7451... | [more] |
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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s1434 | supercontig | LSalAtl2s1434:74513..78727 - |
Analyses
This gene is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Description | snap_masked-LSalAtl2s1434-processed-gene-0.17 |
| Biotype | protein_coding |
| Evidence | IEA |
| Note | Hypothetical protein |
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1434:74513..78727- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAG00000002302-685068 ID=EMLSAG00000002302-685068|Name=EMLSAG00000002302|organism=Lepeophtheirus salmonis|type=gene|length=4215bp|location=Sequence derived from alignment at LSalAtl2s1434:74513..78727- (Lepeophtheirus salmonis)
ATGTATGTATTTAAAAGCACTGTAAGAGCATCCTTCCCTCTTATTCGACT
TTAAACCCCCTCTCTCTCAACAGTAAAAGTTAGAGAGACGCTACGGATTT
TGTATTTCTTTATTCCTTCAAAGTCATGAGTCCATTCCATATATACATCA
ATGCTCTGTCTATCCTAATAATTGCTGTTTTTGCTCAAGATGGACATGGA
TGTCCCTTACAATATGAAATTAGACCCGTAAGTTCTTATAGTTAATATCA
TTCTCTCTTTTGAATCCATTATTTTGAACTTTAGAACTTTTTCAAGCATC
CTTTAAATTACCGTCAAATCAAAAAAGCAACATTTCAACAGCGAAGTGAT
CCCAATGAACTTAATTTAAACCAAGGACTATGGAAGGACTATAGAGGTAT
GTGCAATATTATTTATAATGTAAAAACTAATGGATTTATAGGATGTCACA
CTCAGGAGCCTTGATAGGATTTTTCTTCTTTGAGGGAGTTAAAAACTTTT
ACCATTTGTCTTTAAAAAGATTATTTATTACATTTTTCTATATACATACA
TATGTACAGTGGAGAAAAGTCCTATTTAATCCCTTGCCGATTTGGAAGGT
TGCACACTGATTAAGATTATATATGGAATTGAGGTCTGGCTCGGCCACTT
CCTCACCTCAATTTGCTTCTTCTTGAACCATTTCTTTGTTGTTTTGAGTC
ATTGTTGTGATAAAAGAACCATTATACATCCCATTTTCCGTTCCCTTTCG
CCAAAGATTTCTCGGAGGTCCATCCTCTCTTCGATGCAGGAAAGTCGGCC
TTTCCGCTTGGTTGAGAATCACCTCCGAATCAAAACGTTTCCAGTATGTT
AGTACCAGACGGTGGGGTTAGTGATATTGTGGATATACTCCATTTTTCAT
ACTCTTAACACCTTCTTTTTTTTGTTGTTATAAAGTATCTTTTTCTTAAA
ATAAACCTACCATTAAAAATTACACACTGACCGTTATTTTCTTTAACAGT
GGGCAAACTTAAAAAATCGGTAGGGATCAAATACTTATGTTTTCCACTCT
TTATGGAGAAGATGTATTTTGACTAATCTTTCTTTGGAAAAGCCTGCATA
GATCCAATAGGAAAGAATATACTGACACGTTCCTGTATCGACGGCCCTGA
CAGCATTTATTTATAAGGGTATTTTTTTGTTATCAGGCCATTTTAAAGTA
AGGTCAACGGTTTGCAAAAATATATACCCTTATATTATGTCTTTATGTTG
CTAGACATTAAGAATCATTTAGATGTATTAGTTTCAGAGATGTGAGAGTT
TAAATTCCCTAGAATCTTGTATTTAAAATCCAGTAAATTTTACAATTCCT
TTCATTGCTTTAAAATTACATTTCTCTGTTTGGAAAGTATATATTTCACT
AATTAAGACTTGATATTTTTGAAGCTCATAGCTGAATCAAAACTTTCATT
TTAAACTATTATCTATATATTGCGAAAATAAAATTATCAATATAATGATA
AAATTTATCAAGTTTGTTAAATTTAGTGGAAGATATAGTTGTCTATCTTG
CACCTAGGTAAATCCGTAAAATTAACAAAAAACACATACTACAAGTATTT
TATATTTTTACGAGCCTTTCACTGACTATTCAAATTTTATAATAATTTTT
TAAATGATATATTGGTTCAGACTGTGCTCTCAGAGCGTAGATAGAATTTA
ATCGTTTTCAAATCGTAGAATGATTTTTCAGTCTCAATATAAATAGTTGT
GGTTCGACAGCACACTMCCTCGCTATCCCGTATCTAGTAAAAAACTAGCC
AGACTAGTTTAGGATAGCTTGTATCTAGCTTGCTTAGCTACTTAATGCTT
AACCCATTATTAAAGAAGGGTAAAGAAAAAACCGAGTTTCCAAATAAGAA
AAGAAAAATCATTTGTTGGGTGTGTTCTTTCTTCTTTTTTGCTTATTACT
TAATAAGTCATCGTTGTGTTAACTCCTCCCTCTGAAGTAAGCACTATTGA
CTATCTTTGCGGGATTTTTTTGTTTTTTTATATAGCCGGGGTAATTATTT
CAAAAATACAGACATATACAGATTTTAAACATAAAATAAAAGTTGCTCAG
AATTTTGAGTTACATACTGAAGGCTATGTTTCATTCTGATGAGATCAAAT
TCCTTGTCTCTGGAGGGGAAGTTTTTTTTCGCTAATAAGTTGATTTTTTA
TTCATTAAACAAGATCGATTCCCCGTTTTTCAAAGTTTTTTTGTGAGACA
TTGGTAGTCGATTTGAAAATGTAGCAAAAATAAATTAAAAATCCTAAAAA
CGAATTATTGTACTAACAGAAAAGGGGGAAACGTATATTGTAAGGTTAAT
AGAAATACAAGGTTTAACCATCATTTAATCGGGCTTGCTAGAATTTTCAA
TTTGATGTACTGTACCGACTGCTAGGCAAATAAAGGCAGATTTAAAAAAG
GGGAAGAAGAGGATTAGTGAGTTAGTCTATCGACAAGTTTGACTAAATTC
TGGAATTATTTAAAGCATTGTTAAAATAATTTGAGATCAAATATATAATG
CAGATACGTCCTAGTATAAATATTTATGAATTTAAATATAATAAGTATTA
TATTTTCCTTGCACTAACGCTATTTTAAATGTGGAAGGTTCCCCTCTGCA
TAACGGAATTAATTTTCTTCCCCCAAAAATCATATAAGGCGTAATAATAT
AAGTCTCACTTCTGCCTTCTTTTCCCGCTCTTATACAAATCCCATCTCTA
CCCATTAGTGTCAATTTAGGGTTGAACATTTCATTTTTTAAACTAGTTTA
AACATTAAATATCTCCATGATTTTTTATTTATTTTTGAATTACTTTTTTT
TGCTAACGACGCTCATGATGATCTCAATAATATCTTATTTTTTTCTTCTT
TAAATATGAAGTACTTTTAATAATTATACTTGAAGTTTTTTTCATGGAAT
TTAATTAAAAAATGGGGAACATTTAAGTAGGTATGCTACAAAAAGATTCA
AATTCCATATTGTCTTTTTAAACTTGTTTTATCTAACTGATCATGATAAA
AAAGGTATTTTGGGAGCAAAATCATGTCTCCTGCATCAATATTAAAGGAG
TTATGACCAATTATCAGAGAAATTTCCTAGTTTTTTTTCCCCTAATGTTT
TTGTTATAATCTCCACTAAAATCTATGATTTAATATGATATTTCAATAAA
GCAATACAACTTTCTTAAACATCAATAGAACTGAATTGAATTTTCAAGAA
TTGCATAGCACATTATTGCGCAAAAGATGTTACTTTAAAAATACTAGGGA
AAAAATTATGATAGTACTTTGATATTGCATAGTAATAAATATTGAAGTTG
CTTATGTCGGATTAAAAATTTTGTACTTTGCATTTACGAATTATTCGTTA
AAATTTACTAAACATTAGATAAATAAATATTTTAACGTCCATTATAGCTT
TTTTTTGATCCACTACATTTTATATATAATTTTGAAGATTATTTTGAGAT
GACTTATTTTTTAGCAAATAATGCAATTAAACGAAATTGAATTTTTTTTG
GAAACTGAGTGAAAGATAAATAATTTATCTACAATAAATATAAATAAAGT
CAAATCGATTTTTCTCATTTAAACAATGAAAATCCAGTATTTTTTATAGG
AATCTCAAGAAACACTTTAAGACTTTCTCAAGTTTTTTTTCGCACCGAAA
ATCCGTATTTGTAACATACTTACTACATAAAGCGTCAAGAATAATTTTTA
TTTTTCATTTTTTGTTAGACATACTTTTTTTTTTCTGAAATACGTAGTGT
AATTTATTTTGGTATTCTGGGTTGGTCAATTTGTTATAGAGCCAGTAAAA
CAAAATTTAAATACCTATGTTGTCTAGTGGCTAATTTTAACACCCGTCCA
GCATTATATATACTTTTTATTTTTTATATGGACCGATTTCCTCCTATATT
CTAACTTATATGTTGTAGAAATATCCTTCATATACAACACATTTCAGCCC
CCCCCCCCCCCCACAAAAATGAAGGAATTCAAAATCTTAAATGATAATAT
TAAGAAGAATTCCCTTTTTAAGAAAAAAAACCTTTGTCTTCAATTGGAGA
TTTTAAAATCACTAATTTGAAAGGCAATCAAAACTTTGATCACCACAATC
CCTCCAAAGTCTTCATTTTGTATGGAATTTTTGAATTTTCTACCATGAAA
ATAACTAATATTTAG back to top
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