EMLSAG00000002494, EMLSAG00000002494-685260 (gene) Lepeophtheirus salmonis

Overview


Name	EMLSAG00000002494
Unique Name	EMLSAG00000002494-685260
Type	gene
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of EMLSAG00000002494 vs. C. finmarchicus
Match: gi|592785506|gb|GAXK01169062.1| (TSA: Calanus finmarchicus comp617_c0_seq7 transcribed RNA sequence)

HSP 1 Score: 112.849 bits (281), Expect = 7.855e-31
Identity = 52/99 (52.53%), Postives = 70/99 (70.71%), Query Frame = 0

Query:   21 RLGTFTTDTTSKLDILWHNSDTLGVNSAQVGVFKKTHQISLRSLLESHDSRGLETQVSLEILSNLTNQTLKGQFTDEEFSRLLVSTDFSESDCSRSLWF 119
            +LGT ++D   KLD+L H+SD LGV+ A+VGV ++ HQ+ L SLL SHDSR LE +VSLEILSNL +Q+L+ Q  DE+   LL+S D  ES  +R +  
Sbjct:   67 KLGTLSSDPPGKLDVLGHDSDPLGVDGAEVGVLEEPHQVGLASLL*SHDSR*LEPEVSLEILSNLPDQSLERQLPDEQLRGLLISPDLPESHGARPVPV 363

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BLAST of EMLSAG00000002494 vs. C. finmarchicus
Match: gi|592785501|gb|GAXK01169067.1| (TSA: Calanus finmarchicus comp617_c16_seq3 transcribed RNA sequence)

HSP 1 Score: 116.701 bits (291), Expect = 7.991e-31
Identity = 56/95 (58.95%), Postives = 76/95 (80.00%), Query Frame = 0

Query:   20 VRLGTFTTDTTSKLDILWHNSDTLGVNSAQVGVFKKTHQISLRSLLESHDSRGLETQVSLEILSNLTNQTLKGQFTDEEFSRLLVSTDFSESDCS 114
            V LGTF+TDT S+LDILWHN DTLGV+  QVGV K+++++SL  LLES +S  LE ++S E+LS+ +++TL+GQ  DE+ SRLLVS+D +ESD S
Sbjct:  177 VNLGTFSTDTASELDILWHNGDTLGVDGTQVGVLKQSNEVSLTGLLESSNSSRLEPEISFEVLSDFSHETLEGQLPDEKLSRLLVSSDLTESDGS 461

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BLAST of EMLSAG00000002494 vs. C. finmarchicus
Match: gi|592785502|gb|GAXK01169066.1| (TSA: Calanus finmarchicus comp617_c16_seq2 transcribed RNA sequence)

HSP 1 Score: 116.316 bits (290), Expect = 1.108e-30
Identity = 56/95 (58.95%), Postives = 76/95 (80.00%), Query Frame = 0

Query:   20 VRLGTFTTDTTSKLDILWHNSDTLGVNSAQVGVFKKTHQISLRSLLESHDSRGLETQVSLEILSNLTNQTLKGQFTDEEFSRLLVSTDFSESDCS 114
            V LGTF+TDT S+LDILWHN DTLGV+  QVGV K+++++SL  LLES +S  LE ++S E+LS+ +++TL+GQ  DE+ SRLLVS+D +ESD S
Sbjct:  185 VNLGTFSTDTASELDILWHNGDTLGVDGTQVGVLKQSNEVSLTGLLESSNSSRLEPEISFEVLSDFSHETLEGQLPDEKLSRLLVSSDLTESDGS 469

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BLAST of EMLSAG00000002494 vs. C. finmarchicus
Match: gi|592785499|gb|GAXK01169069.1| (TSA: Calanus finmarchicus comp617_c16_seq5 transcribed RNA sequence)

HSP 1 Score: 112.849 bits (281), Expect = 3.469e-30
Identity = 54/100 (54.00%), Postives = 70/100 (70.00%), Query Frame = 0

Query:   18 TRVRLGTFTTDTTSKLDILWHNSDTLGVNSAQVGVFKKTHQISLRSLLESHDSRGLETQVSLEILSNLTNQTLKGQFTDEEFSRLLVSTDFSESDCSRSL 117
            TR  LG  T D   +LDIL H+ D+LGV+ A+VGV ++THQ+ L SLL SHDSR LE +VSLEILSNL +Q+L+ Q  DE+   LL+S D  ES  +R +
Sbjct:  358 TRYYLGPLTADPPGELDILGHDGDSLGVDGAEVGVLEQTHQVGLTSLL*SHDSR*LEPEVSLEILSNLPDQSLERQLPDEQLRGLLISPDLPESHGARPV 657

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BLAST of EMLSAG00000002494 vs. C. finmarchicus
Match: gi|592785503|gb|GAXK01169065.1| (TSA: Calanus finmarchicus comp617_c16_seq1 transcribed RNA sequence)

HSP 1 Score: 115.161 bits (287), Expect = 3.728e-30
Identity = 56/95 (58.95%), Postives = 76/95 (80.00%), Query Frame = 0

Query:   20 VRLGTFTTDTTSKLDILWHNSDTLGVNSAQVGVFKKTHQISLRSLLESHDSRGLETQVSLEILSNLTNQTLKGQFTDEEFSRLLVSTDFSESDCS 114
            V LGTF+TDT S+LDILWHN DTLGV+  QVGV K+++++SL  LLES +S  LE ++S E+LS+ +++TL+GQ  DE+ SRLLVS+D +ESD S
Sbjct:  367 VNLGTFSTDTASELDILWHNGDTLGVDGTQVGVLKQSNEVSLTGLLESSNSSRLEPEISFEVLSDFSHETLEGQLPDEKLSRLLVSSDLTESDGS 651

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BLAST of EMLSAG00000002494 vs. C. finmarchicus
Match: gi|592785512|gb|GAXK01169056.1| (TSA: Calanus finmarchicus comp617_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 115.161 bits (287), Expect = 3.966e-30
Identity = 56/95 (58.95%), Postives = 76/95 (80.00%), Query Frame = 0

Query:   20 VRLGTFTTDTTSKLDILWHNSDTLGVNSAQVGVFKKTHQISLRSLLESHDSRGLETQVSLEILSNLTNQTLKGQFTDEEFSRLLVSTDFSESDCS 114
            V LGTF+TDT S+LDILWHN DTLGV+  QVGV K+++++SL  LLES +S  LE ++S E+LS+ +++TL+GQ  DE+ SRLLVS+D +ESD S
Sbjct:  822 VNLGTFSTDTASELDILWHNGDTLGVDGTQVGVLKQSNEVSLTGLLESSNSSRLEPEISFEVLSDFSHETLEGQLPDEKLSRLLVSSDLTESDGS 1106

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BLAST of EMLSAG00000002494 vs. C. finmarchicus
Match: gi|592785493|gb|GAXK01169075.1| (TSA: Calanus finmarchicus comp617_c16_seq11 transcribed RNA sequence)

HSP 1 Score: 112.079 bits (279), Expect = 4.245e-30
Identity = 52/99 (52.53%), Postives = 70/99 (70.71%), Query Frame = 0

Query:   21 RLGTFTTDTTSKLDILWHNSDTLGVNSAQVGVFKKTHQISLRSLLESHDSRGLETQVSLEILSNLTNQTLKGQFTDEEFSRLLVSTDFSESDCSRSLWF 119
            +LGT ++D   KLD+L H+ D LGV+ A+VGV ++THQ+ L SLL SHDSR LE +VSLEILSNL +Q+L+ Q  DE+   LL+S D  ES  +R +  
Sbjct:  352 KLGTLSSDPPGKLDVLGHDGDPLGVDGAEVGVLEQTHQVGLTSLL*SHDSR*LEPEVSLEILSNLPDQSLERQLPDEQLRGLLISPDLPESHGARPVPV 648

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BLAST of EMLSAG00000002494 vs. C. finmarchicus
Match: gi|592785496|gb|GAXK01169072.1| (TSA: Calanus finmarchicus comp617_c16_seq8 transcribed RNA sequence)

HSP 1 Score: 108.612 bits (270), Expect = 9.852e-29
Identity = 52/99 (52.53%), Postives = 70/99 (70.71%), Query Frame = 0

Query:   21 RLGTFTTDTTSKLDILWHNSDTLGVNSAQVGVFKKTHQISLRSLLESHDSRGLETQVSLEILSNLTNQTLKGQFTDEEFSRLLVSTDFSESDCSRSLWF 119
            RL TF+++   KLD+L H+ D LGV+ A+VGV ++THQ+ L SLL SHDSR LE +VSLEILSNL +Q+L+ Q  DE+   LL+S D  ES  +R +  
Sbjct:  352 RLCTFSSNPPGKLDVLGHDGDPLGVDGAEVGVLEQTHQVGLTSLL*SHDSR*LEPEVSLEILSNLPDQSLERQLPDEQLRGLLISPDLPESHGARPVPV 648

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BLAST of EMLSAG00000002494 vs. C. finmarchicus
Match: gi|592785507|gb|GAXK01169061.1| (TSA: Calanus finmarchicus comp617_c0_seq6 transcribed RNA sequence)

HSP 1 Score: 107.842 bits (268), Expect = 1.075e-28
Identity = 50/97 (51.55%), Postives = 71/97 (73.20%), Query Frame = 0

Query:   18 TRVRLGTFTTDTTSKLDILWHNSDTLGVNSAQVGVFKKTHQISLRSLLESHDSRGLETQVSLEILSNLTNQTLKGQFTDEEFSRLLVSTDFSESDCS 114
            TR  LG  T D   +LDIL H+ D+LGV+ A+VGV +++HQ+ L  LLES +S  LE ++S E+LS+ +++TL+GQ  DE+ SRLLVS+D +ESD S
Sbjct:  121 TRYYLGPLTADPPGELDILGHDGDSLGVDGAEVGVLEQSHQVGLTGLLESSNSSRLEPEISFEVLSDFSHETLEGQLPDEKLSRLLVSSDLTESDGS 411

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BLAST of EMLSAG00000002494 vs. C. finmarchicus
Match: gi|592785491|gb|GAXK01169077.1| (TSA: Calanus finmarchicus comp617_c16_seq13 transcribed RNA sequence)

HSP 1 Score: 107.457 bits (267), Expect = 1.271e-28
Identity = 50/97 (51.55%), Postives = 71/97 (73.20%), Query Frame = 0

Query:   18 TRVRLGTFTTDTTSKLDILWHNSDTLGVNSAQVGVFKKTHQISLRSLLESHDSRGLETQVSLEILSNLTNQTLKGQFTDEEFSRLLVSTDFSESDCS 114
            TR  LG  T D   +LDIL H+ D+LGV+ A+VGV +++HQ+ L  LLES +S  LE ++S E+LS+ +++TL+GQ  DE+ SRLLVS+D +ESD S
Sbjct:  177 TRYYLGPLTADPPGELDILGHDGDSLGVDGAEVGVLEQSHQVGLTGLLESSNSSRLEPEISFEVLSDFSHETLEGQLPDEKLSRLLVSSDLTESDGS 467

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BLAST of EMLSAG00000002494 vs. L. salmonis peptides
Match: EMLSAP00000002494 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1489:15247:16434:1 gene:EMLSAG00000002494 transcript:EMLSAT00000002494 description:"snap_masked-LSalAtl2s1489-processed-gene-0.4")

HSP 1 Score: 246.899 bits (629), Expect = 3.563e-85
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0

Query:    1 MKWRPLEGPVCKTKFSHTRVRLGTFTTDTTSKLDILWHNSDTLGVNSAQVGVFKKTHQISLRSLLESHDSRGLETQVSLEILSNLTNQTLKGQFTDEEFSRLLVSTDFSESDCSRSLWFKKQ 122
            MKWRPLEGPVCKTKFSHTRVRLGTFTTDTTSKLDILWHNSDTLGVNSAQVGVFKKTHQISLRSLLESHDSRGLETQVSLEILSNLTNQTLKGQFTDEEFSRLLVSTDFSESDCSRSLWFKKQ
Sbjct:    1 MKWRPLEGPVCKTKFSHTRVRLGTFTTDTTSKLDILWHNSDTLGVNSAQVGVFKKTHQISLRSLLESHDSRGLETQVSLEILSNLTNQTLKGQFTDEEFSRLLVSTDFSESDCSRSLWFKKQ 122

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BLAST of EMLSAG00000002494 vs. L. salmonis peptides
Match: EMLSAP00000011181 (pep:novel supercontig:LSalAtl2s:LSalAtl2s760:411488:411772:-1 gene:EMLSAG00000011181 transcript:EMLSAT00000011181 description:"augustus_masked-LSalAtl2s760-processed-gene-3.4")

HSP 1 Score: 83.5741 bits (205), Expect = 1.407e-21
Identity = 40/60 (66.67%), Postives = 50/60 (83.33%), Query Frame = 0

Query:   20 VRLGTFTTDTTSKLDILWHNSDTLGVNSAQVGVFKKTHQISLRSLLESHDSRGLETQVSL 79
            + L TF TDT S+LDIL H+ +TLGV+ AQVG+ K+T++ISL S L+SHDSRGLETQVSL
Sbjct:   18 IHLSTFATDTASELDILGHDCNTLGVDCAQVGILKETNKISLGSFLKSHDSRGLETQVSL 77

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BLAST of EMLSAG00000002494 vs. L. salmonis peptides
Match: EMLSAP00000007017 (pep:novel supercontig:LSalAtl2s:LSalAtl2s399:369382:380976:-1 gene:EMLSAG00000007017 transcript:EMLSAT00000007017 description:"snap_masked-LSalAtl2s399-processed-gene-3.2")

HSP 1 Score: 81.2629 bits (199), Expect = 8.581e-21
Identity = 42/93 (45.16%), Postives = 62/93 (66.67%), Query Frame = 0

Query:   10 VCKTKFSHTRV-----RLGTFTTDTTSKLDILWHNSDTLGVNSAQVGVFKKTHQISLRSLLESHDSRGLETQVSLEILSNLTNQTLKGQFTDE 97
            + K+ F H  V      L  F+++TT +LDIL H+  T GVN  QVG+F++THQI  R  L+  +S  LE ++ L++LSNLTN+TL+ +FTD+
Sbjct:    1 MVKSTFIHLDVIENETTLSPFSSNTTGQLDILGHDGHTFGVNGTQVGIFEETHQIGFRGFLKCTNSSTLEPKIRLKVLSNLTNKTLERKFTDQ 93

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BLAST of EMLSAG00000002494 vs. L. salmonis peptides
Match: EMLSAP00000009978 (pep:novel supercontig:LSalAtl2s:LSalAtl2s652:276846:277262:-1 gene:EMLSAG00000009978 transcript:EMLSAT00000009978 description:"snap_masked-LSalAtl2s652-processed-gene-2.24")

HSP 1 Score: 65.4698 bits (158), Expect = 3.983e-15
Identity = 32/58 (55.17%), Postives = 40/58 (68.97%), Query Frame = 0

Query:   15 FSHTRVR---LGTFTTDTTSKLDILWHNSDTLGVNSAQVGVFKKTHQISLRSLLESHD 69
            F +T+ R   L  F+ +TT +LDIL HNSDT GVN AQVGVF++THQI  R  LE  +
Sbjct:    2 FIYTKRRETLLSPFSANTTGQLDILGHNSDTFGVNGAQVGVFEETHQIGFRGFLEREN 59

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BLAST of EMLSAG00000002494 vs. L. salmonis peptides
Match: EMLSAP00000010823 (pep:novel supercontig:LSalAtl2s:LSalAtl2s719:236202:237270:1 gene:EMLSAG00000010823 transcript:EMLSAT00000010823 description:"snap_masked-LSalAtl2s719-processed-gene-2.2")

HSP 1 Score: 53.5286 bits (127), Expect = 1.499e-10
Identity = 29/63 (46.03%), Postives = 42/63 (66.67%), Query Frame = 0

Query:   35 ILWHNSDTLGVNSAQVGVFKKTHQIS-LRSLLESHDSRGLETQVSLEILSNLTNQTLKGQFTD 96
            IL  +  T GVN AQVGVF++  QI   R  L+  ++  LE ++ L++LSNL N+TL+ +FTD
Sbjct:   15 ILGLDGHTFGVNGAQVGVFEEIQQIDDSRGFLKCTNNSSLELKIRLKVLSNLINKTLERKFTD 77

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BLAST of EMLSAG00000002494 vs. nr
Match: gi|942381631|gb|JAN72745.1| (hypothetical protein [Daphnia magna])

HSP 1 Score: 111.309 bits (277), Expect = 1.380e-28
Identity = 49/98 (50.00%), Postives = 73/98 (74.49%), Query Frame = 0

Query:   20 VRLGTFTTDTTSKLDILWHNSDTLGVNSAQVGVFKKTHQISLRSLLESHDSRGLETQVSLEILSNLTNQTLKGQFTDEEFSRLLVSTDFSESDCSRSL 117
            ++L TF TDTTS+LD+L HN ++ G++  Q+G+FKKT+Q+ L  LL+ HD R LE QV LEIL + ++Q L+GQ  D++ SRLLV+ + SESD + ++
Sbjct:    1 MQLSTFATDTTSQLDVLGHNGNSFGMDGTQIGIFKKTNQVGLACLLQGHDGRALEPQVGLEILGDFSDQALEGQLADQKLSRLLVTANLSESDGTGAI 98

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BLAST of EMLSAG00000002494 vs. nr
Match: gi|1009371742|gb|KYM95956.1| (hypothetical protein ALC62_13404, partial [Cyphomyrmex costatus])

HSP 1 Score: 108.997 bits (271), Expect = 4.085e-28
Identity = 52/93 (55.91%), Postives = 77/93 (82.80%), Query Frame = 0

Query:   22 LGTFTTDTTSKLDILWHNSDTLGVNSAQVGVFKKTHQISLRSLLESHDSRGLETQVSLEILSNLTNQTLKGQFTDEEFSRLLVSTDFSESDCS 114
            L T + +TT +LDIL H+S++L +N A++GVFK+T++ISL SLL+ H+SR LET++  E+LSNLT++TL+ QFTD++FS LLV+T+FS+S  S
Sbjct:    1 LSTLSANTTCQLDILRHDSNSLSMNGAEIGVFKQTNEISLASLLQRHNSRALETKIRFEVLSNLTDETLERQFTDQQFSALLVATNFSKSHSS 93

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BLAST of EMLSAG00000002494 vs. nr
Match: gi|1050377392|gb|OCT79589.1| (hypothetical protein XELAEV_18026397mg [Xenopus laevis])

HSP 1 Score: 111.694 bits (278), Expect = 6.496e-28
Identity = 50/91 (54.95%), Postives = 69/91 (75.82%), Query Frame = 0

Query:   24 TFTTDTTSKLDILWHNSDTLGVNSAQVGVFKKTHQISLRSLLESHDSRGLETQVSLEILSNLTNQTLKGQFTDEEFSRLLVSTDFSESDCS 114
            +  +D   +LD+L H+ D LG++ AQ+GV K+ +QISL  LL+SHD R LETQVSLEILS+LTNQ L+ QF +++ S  LV++DFSESD +
Sbjct:  131 SLASDPAGQLDVLGHDGDPLGMDGAQIGVLKQANQISLAGLLQSHDGRALETQVSLEILSDLTNQALERQFANQQLSGFLVTSDFSESDST 221

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BLAST of EMLSAG00000002494 vs. nr
Match: gi|256794766|gb|ACV29864.1| (histone H3, partial [Sinum sanctijohannis])

HSP 1 Score: 105.145 bits (261), Expect = 3.277e-27
Identity = 48/78 (61.54%), Postives = 61/78 (78.21%), Query Frame = 0

Query:   34 DILWHNSDTLGVNSAQVGVFKKTHQISLRSLLESHDSRGLETQVSLEILSNLTNQTLKGQFTDEEFSRLLVSTDFSES 111
            D+L H+ DTLGV+ AQVGV K+T Q+    LLESHD R LE QVSLE+LS+LT+QTL+GQ  D++ S LLV+TD +ES
Sbjct:    2 DVLGHDGDTLGVDGAQVGVLKETDQVGFAGLLESHDGRALEAQVSLEVLSDLTDQTLEGQLADQKLSALLVTTDLTES 79

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BLAST of EMLSAG00000002494 vs. nr
Match: gi|1098544213|ref|WP_071227323.1| (hypothetical protein [Acinetobacter baumannii] >gi|1096319135|gb|OIC15588.1| hypothetical protein A7L51_19665 [Acinetobacter baumannii])

HSP 1 Score: 105.531 bits (262), Expect = 3.310e-27
Identity = 49/97 (50.52%), Postives = 68/97 (70.10%), Query Frame = 0

Query:   24 TFTTDTTSKLDILWHNSDTLGVNSAQVGVFKKTHQISLRSLLESHDSRGLETQVSLEILSNLTNQTLKGQFTDEEFSRLLVSTDFSESDCSRSLWFK 120
            T TT+   +LD+L  + DTLGV+SA+VGV ++  ++ L  LL+  D   LE QV LE+LSNLTN+TL+GQ  DEE  RLLV+TD +ESD +R +  +
Sbjct:   10 TLTTEAAGELDVLALDGDTLGVDSAEVGVLEERDEVGLDGLLKRADGGRLEAQVGLEVLSNLTNKTLEGQLADEELGRLLVATDLTESDGTRLVAVR 106

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BLAST of EMLSAG00000002494 vs. nr
Match: gi|1009376790|gb|KYN00180.1| (hypothetical protein ALC62_09060 [Cyphomyrmex costatus])

HSP 1 Score: 103.605 bits (257), Expect = 4.905e-26
Identity = 49/91 (53.85%), Postives = 63/91 (69.23%), Query Frame = 0

Query:   22 LGTFTTDTTSKLDILWHNSDTLGVNSAQVGVFKKTHQISLRSLLESHDSRGLETQVSLEILSNLTNQTLKGQFTDEEFSRLLVSTDFSESD 112
            L TFT D+  +L I WH+ DT GVN AQ+ VF++  Q+S R  LE   S  L+ Q+  EILS+ TNQTL+ QF DE+  RLLVS+DFS+SD
Sbjct:   12 LSTFTADSPCQLYIFWHDRDTFGVNGAQIRVFEQADQVSFRRFLEGTYSGALKAQIGFEILSDFTNQTLERQFPDEQLCRLLVSSDFSQSD 102

[Close]

BLAST of EMLSAG00000002494 vs. nr
Match: gi|1102723597|gb|OIW22072.1| (hypothetical protein TanjilG_02635 [Lupinus angustifolius])

HSP 1 Score: 105.145 bits (261), Expect = 5.386e-26
Identity = 45/96 (46.88%), Postives = 67/96 (69.79%), Query Frame = 0

Query:   22 LGTFTTDTTSKLDILWHNSDTLGVNSAQVGVFKKTHQISLRSLLESHDSRGLETQVSLEILSNLTNQTLKGQFTDEEFSRLLVSTDFSESDCSRSL 117
            L T + D   KLD+L H+ D LGV+ AQVGV K+T+Q+ L  LL+ HD  GLE+Q+  E+L N +N+ L+G+  DE+ S LLV+TD ++SD + ++
Sbjct:   35 LSTLSADAAGKLDVLGHDGDALGVDGAQVGVLKETNQVGLGRLLQGHDGAGLESQIGFEVLRNFSNKALEGELPDEKLSALLVTTDLTKSDGTGAV 130

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BLAST of EMLSAG00000002494 vs. nr
Match: gi|1073757017|emb|SCV66515.1| (hypothetical protein ANAPC5_01440 [Anaplasma phagocytophilum])

HSP 1 Score: 103.605 bits (257), Expect = 7.630e-26
Identity = 48/102 (47.06%), Postives = 69/102 (67.65%), Query Frame = 0

Query:   19 RVRLGTFTTDTTSKLDILWHNSDTLGVNSAQVGVFKKTHQISLRSLLESHDSRGLETQVSLEILSNLTNQTLKGQFTDEEFSRLLVSTDFSESDCSRSLWFK 120
            R  L  FT D TS+LD+L H+   LGV+  +VGVFK+T Q+ L  LL+ H SR LE +V LE+L +L +Q L+GQ  DE+ SRLLV+T+ ++ D +R +  +
Sbjct:    3 RQHLSAFTADATSQLDVLRHDGYPLGVDGTKVGVFKETDQVGLAGLLQGHHSRALEAEVRLEVLRDLPHQPLEGQLADEQLSRLLVTTNLTQRDRARPVAMR 104

[Close]

BLAST of EMLSAG00000002494 vs. nr
Match: gi|1021053602|gb|KZN11380.1| (hypothetical protein DCAR_004036 [Daucus carota subsp. sativus])

HSP 1 Score: 102.064 bits (253), Expect = 9.628e-26
Identity = 51/95 (53.68%), Postives = 70/95 (73.68%), Query Frame = 0

Query:   20 VRLGTFTTDTTSKLDILWHNSDTLGVNSAQVGVFKKTHQISLRSLLESHDSRGLETQVSLEILSNLTNQTLKGQFTDEEFSRLLVSTDFSESDCS 114
            ++L T +T+ + +LD+L H+ ++LG+NSAQVGV ++T QISLR LL+S  SR LETQ+ LEIL + T+Q L+ +  DEE   LLV  DFSESD S
Sbjct:    1 MKLSTLSTNASCQLDVLGHDGNSLGMNSAQVGVLEQTDQISLRCLLKSRHSRALETQIGLEILGDFTDQALEWELPDEELCGLLVLADFSESDGS 95

[Close]

BLAST of EMLSAG00000002494 vs. nr
Match: gi|1034197960|emb|SBO33236.1| (hypothetical protein ANAPC2_01294 [Anaplasma phagocytophilum])

HSP 1 Score: 103.219 bits (256), Expect = 1.153e-25
Identity = 48/102 (47.06%), Postives = 69/102 (67.65%), Query Frame = 0

Query:   19 RVRLGTFTTDTTSKLDILWHNSDTLGVNSAQVGVFKKTHQISLRSLLESHDSRGLETQVSLEILSNLTNQTLKGQFTDEEFSRLLVSTDFSESDCSRSLWFK 120
            R  L  FT D TS+LD+L H+   LGV+  +VGVFK+T Q+ L  LL+ H SR LE +V LE+L +L +Q L+GQ  DE+ SRLLV+T+ ++ D +R +  +
Sbjct:    3 RQDLSAFTADATSQLDVLRHDGYPLGVDGTKVGVFKETDQVGLAGLLQGHHSRALEAEVRLEVLRDLPHQPLEGQLADEQLSRLLVTTNLTQRDRARPVAMR 104

[Close]

BLAST of EMLSAG00000002494 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold578_size132436-snap-gene-0.33 (protein:Tk11693 transcript:maker-scaffold578_size132436-snap-gene-0.33-mRNA-1 annotation:"histone h1")

HSP 1 Score: 111.309 bits (277), Expect = 2.193e-31
Identity = 51/88 (57.95%), Postives = 65/88 (73.86%), Query Frame = 0

Query:   24 TFTTDTTSKLDILWHNSDTLGVNSAQVGVFKKTHQISLRSLLESHDSRGLETQVSLEILSNLTNQTLKGQFTDEEFSRLLVSTDFSES 111
            T  TD   +LD+L H+  +LGV+ AQVGV ++  Q+SL  LLESHD R LETQV LE+LS+LT+QTL+GQ  DE+   LLV+TD SES
Sbjct:  188 TLATDAAGQLDVLGHDGHSLGVDGAQVGVLEEADQVSLGGLLESHDGRRLETQVGLEVLSDLTDQTLEGQLADEQLGGLLVATDLSES 275

The following BLAST results are available for this feature:

BLAST of EMLSAG00000002494 vs. GO
BLAST of EMLSAG00000002494 vs. C. finmarchicus
BLAST of EMLSAG00000002494 vs. L. salmonis peptides
BLAST of EMLSAG00000002494 vs. SwissProt
BLAST of EMLSAG00000002494 vs. Select Arthropod Genomes
BLAST of EMLSAG00000002494 vs. nr
BLAST of EMLSAG00000002494 vs. Tigriopus kingsejongenis genes

BLAST of EMLSAG00000002494 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000002494 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|592785506\|gb\|GAXK01169062.1\|	7.855e-31	52.53	TSA: Calanus finmarchicus comp617_c0_seq7 transcri...	[more]
gi\|592785501\|gb\|GAXK01169067.1\|	7.991e-31	58.95	TSA: Calanus finmarchicus comp617_c16_seq3 transcr...	[more]
gi\|592785502\|gb\|GAXK01169066.1\|	1.108e-30	58.95	TSA: Calanus finmarchicus comp617_c16_seq2 transcr...	[more]
gi\|592785499\|gb\|GAXK01169069.1\|	3.469e-30	54.00	TSA: Calanus finmarchicus comp617_c16_seq5 transcr...	[more]
gi\|592785503\|gb\|GAXK01169065.1\|	3.728e-30	58.95	TSA: Calanus finmarchicus comp617_c16_seq1 transcr...	[more]
gi\|592785512\|gb\|GAXK01169056.1\|	3.966e-30	58.95	TSA: Calanus finmarchicus comp617_c0_seq1 transcri...	[more]
gi\|592785493\|gb\|GAXK01169075.1\|	4.245e-30	52.53	TSA: Calanus finmarchicus comp617_c16_seq11 transc...	[more]
gi\|592785496\|gb\|GAXK01169072.1\|	9.852e-29	52.53	TSA: Calanus finmarchicus comp617_c16_seq8 transcr...	[more]
gi\|592785507\|gb\|GAXK01169061.1\|	1.075e-28	51.55	TSA: Calanus finmarchicus comp617_c0_seq6 transcri...	[more]
gi\|592785491\|gb\|GAXK01169077.1\|	1.271e-28	51.55	TSA: Calanus finmarchicus comp617_c16_seq13 transc...	[more]

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BLAST of EMLSAG00000002494 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 5


Match Name	E-value	Identity	Description
EMLSAP00000002494	3.563e-85	100.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s1489:1524...	[more]
EMLSAP00000011181	1.407e-21	66.67	pep:novel supercontig:LSalAtl2s:LSalAtl2s760:41148...	[more]
EMLSAP00000007017	8.581e-21	45.16	pep:novel supercontig:LSalAtl2s:LSalAtl2s399:36938...	[more]
EMLSAP00000009978	3.983e-15	55.17	pep:novel supercontig:LSalAtl2s:LSalAtl2s652:27684...	[more]
EMLSAP00000010823	1.499e-10	46.03	pep:novel supercontig:LSalAtl2s:LSalAtl2s719:23620...	[more]

BLAST of EMLSAG00000002494 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000002494 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000002494 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25


Match Name	E-value	Identity	Description
gi\|942381631\|gb\|JAN72745.1\|	1.380e-28	50.00	hypothetical protein [Daphnia magna]	[more]
gi\|1009371742\|gb\|KYM95956.1\|	4.085e-28	55.91	hypothetical protein ALC62_13404, partial [Cyphomy...	[more]
gi\|1050377392\|gb\|OCT79589.1\|	6.496e-28	54.95	hypothetical protein XELAEV_18026397mg [Xenopus la...	[more]
gi\|256794766\|gb\|ACV29864.1\|	3.277e-27	61.54	histone H3, partial [Sinum sanctijohannis]	[more]
gi\|1098544213\|ref\|WP_071227323.1\|	3.310e-27	50.52	hypothetical protein [Acinetobacter baumannii] >gi...	[more]
gi\|1009376790\|gb\|KYN00180.1\|	4.905e-26	53.85	hypothetical protein ALC62_09060 [Cyphomyrmex cost...	[more]
gi\|1102723597\|gb\|OIW22072.1\|	5.386e-26	46.88	hypothetical protein TanjilG_02635 [Lupinus angust...	[more]
gi\|1073757017\|emb\|SCV66515.1\|	7.630e-26	47.06	hypothetical protein ANAPC5_01440 [Anaplasma phago...	[more]
gi\|1021053602\|gb\|KZN11380.1\|	9.628e-26	53.68	hypothetical protein DCAR_004036 [Daucus carota su...	[more]
gi\|1034197960\|emb\|SBO33236.1\|	1.153e-25	47.06	hypothetical protein ANAPC2_01294 [Anaplasma phago...	[more]

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BLAST of EMLSAG00000002494 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 1


Match Name	E-value	Identity	Description
maker-scaffold578_size132436-snap-gene-0.33	2.193e-31	57.95	protein:Tk11693 transcript:maker-scaffold578_size1...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s1489	supercontig	LSalAtl2s1489:15247..16434 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016
Blast vs. GO	2014-04-02
TblastN vs C. finmarchicus TSA	2014-05-09
Blastp vs. self	2014-05-10
Blastp vs. SwissProt	2017-02-10
Blastp vs. Selected Arthropods	2017-02-20
Blastp vs. NR (2/2017)	2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins	2018-04-18

Properties


Property Name	Value
Logic name	ensemblgenomes
Description	snap_masked-LSalAtl2s1489-processed-gene-0.4
Biotype	protein_coding
Evidence	IEA
Note	hypothetical protein XELAEV_18026397mg [Xenopus laevis]

Cross References

External references for this gene


Database	Accession
Ensembl Metazoa (gene)	EMLSAG00000002494 (primary cross-reference)

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
EMLSAT00000002494	EMLSAT00000002494-698341	Lepeophtheirus salmonis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at LSalAtl2s1489:15247..16434+

gene from alignment at LSalAtl2s1489:15247..16434+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAG00000002494-685260 ID=EMLSAG00000002494-685260|Name=EMLSAG00000002494|organism=Lepeophtheirus salmonis|type=gene|length=1188bp|location=Sequence derived from alignment at LSalAtl2s1489:15247..16434+ (Lepeophtheirus salmonis)
ATGAAAGTAATAAAATAAACCAGACTAACTTTCAAGATTTTCTCTCTTTT
CAATTATATCCAAACAGCAGCGATTTTCATATTCATGGGAGCATAAAGGT
TTTTCGAGCAGCTGAGCTTTCTGTAATTAATGTATGAAATGTAAACATAA
TATTAATAAAAATAATAATTCCCTGTGTTGCAAAACAAACAAAATAAGCA
CTTAATTCTTATTATCTCTTACTTGATTCTTATCATTTAGATAACCAACT
CAAAGACAGCTTTAAAAATAAATCTTATTTTAAAATTAAGTGGAGGCCCT
TAGAAGGACCGGTTTGTAAAACTAAGTTTAGCCATACAAGGGTTCGCTTA
GGCACGTTCACCACGGATACGACGAGCAAGCTGGATATCCTTTGGCATAA
TAGTGACACGCTTGGCGTGAATAGCGCACAAGTTGGTGTCTTCAAAAAGA
CCCACCAGATAAGCCTCAGAAGCCTCTTGGAGAGCCATGACAGCAGAGGA
CTGGAAACGCAAGTCAGTCTTGAAATCCTGAGCAATCTCACGAACCAGAC
GTTGAAAGGGCAATTTACGGATGAGGAGTTCAGTAGACTTTTGGTATCTA
CGGATTTCTCTGAGAGCGACTGTTCCAGGTCTGTATCTGTGGGGCTTCTT
CACTCCTCCAGTGGCAGGGGSAGATTTACGAGCTGCCTTGGTGGCGAGCT
GCTTACGGGGAGCTTTTCCTCCAGTGGATTTACGAGCTGTTTGCTTGGTA
CGGGCCATCTTCGTTAACTGAATAAAATTTGTCAACTGTTCAACTTTTTT
TACCTTCACGATGGTTAAATACTATGAAATCCGCGCGCACCCTGATATAA
GTTACCTGCTCTCAAACCCAGACCAAGCTAGAAGCAGATGCAAATAAACT
TCTTCCCCTGTCTCTTTTCTCCCTCTCCCGCCAACATTAATTTAAAAATG
GGGTTCTTCCCCTCTTTAATAATAAGGAGACAAAGTTATTATCCGGTCAT
GTATTCATAATTTTTAGCGCCATATACTCTCAGAGACATCTGCCTACAAT
ATTATGTACTTCAGTTCAAATATTTTTCTTTTATTAAATCAGAGTATCTT
TATTTTTAAAGTTATTTTTTCGCACAACTAAGAGTATGCTATTTTTTTAT
ATCAATTTTTATTGTAGCTATGGTTCAAAAAACAATAA

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