EMLSAG00000003117, EMLSAG00000003117-685883 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000003117
Unique NameEMLSAG00000003117-685883
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of EMLSAG00000003117 vs. GO
Match: - (symbol:FMRFaR "FMRFamide Receptor" species:7227 "Drosophila melanogaster" [GO:0004930 "G-protein coupled receptor activity" evidence=ISS] [GO:0007186 "G-protein coupled receptor signaling pathway" evidence=ISS] [GO:0016021 "integral component of membrane" evidence=ISS] [GO:0008188 "neuropeptide receptor activity" evidence=ISS;IPI] [GO:0004985 "opioid receptor activity" evidence=NAS] [GO:0007218 "neuropeptide signaling pathway" evidence=IDA] [GO:0005887 "integral component of plasma membrane" evidence=IDA] [GO:0001653 "peptide receptor activity" evidence=IDA] [GO:0008345 "larval locomotory behavior" evidence=IMP] [GO:0002209 "behavioral defense response" evidence=IMP] [GO:0008344 "adult locomotory behavior" evidence=IMP] InterPro:IPR000276 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PROSITE:PS50262 EMBL:AE014296 GO:GO:0005887 GO:GO:0007204 GO:GO:0008344 GO:GO:0008345 ChiTaRS:SLC4A1 GO:GO:0008188 EMBL:AF351129 EMBL:BK000442 RefSeq:NP_001261347.1 RefSeq:NP_647758.1 UniGene:Dm.14721 ProteinModelPortal:Q9VZW5 SMR:Q9VZW5 STRING:7227.FBpp0072850 PaxDb:Q9VZW5 PRIDE:Q9VZW5 EnsemblMetazoa:FBtr0072980 EnsemblMetazoa:FBtr0332085 GeneID:38357 KEGG:dme:Dmel_CG2114 CTD:38357 FlyBase:FBgn0035385 eggNOG:NOG256449 GeneTree:ENSGT00530000064796 HOGENOM:HOG000232168 InParanoid:Q9VZW5 OMA:WTRICED OrthoDB:EOG7353ZD PhylomeDB:Q9VZW5 GenomeRNAi:38357 NextBio:808197 Bgee:Q9VZW5 GO:GO:0002209 Uniprot:Q9VZW5)

HSP 1 Score: 47.7506 bits (112), Expect = 1.083e-5
Identity = 30/106 (28.30%), Postives = 56/106 (52.83%), Query Frame = 0 
Query:   33 NMTFQFITQGILMPAVSIFGIIGNSITIKVLKDRDVKLNKEFRDVLSGLATFDNLLLIFTFLLFSLPSLSK------TYKDEYFALTVPMLYPATNIFTTASRWIS 132
            N   +F   G+L+  V + GI+GN I++ +L    ++ +  +  +L+GLA  D +L+I + LLF +PS+         Y +  +    P ++P   I  TAS +++
Sbjct:  108 NNRIEFWVCGVLINIVGVLGILGNIISMIILSRPQMRSSINY--LLTGLARCDTVLIITSILLFGIPSIYPYTGHFFGYYNYVYPFISPAVFPIGMIAQTASIYMT 211
[Close]
BLAST of EMLSAG00000003117 vs. GO
Match: - (symbol:frpr-15 "Protein FRPR-15" species:6239 "Caenorhabditis elegans" [GO:0004930 "G-protein coupled receptor activity" evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] InterPro:IPR000276 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PROSITE:PS50262 GO:GO:0016021 GO:GO:0004930 GeneTree:ENSGT00530000064796 OrthoDB:EOG7353ZD EMBL:Z74474 RefSeq:NP_506168.2 UniGene:Cel.36643 ProteinModelPortal:Q21413 SMR:Q21413 STRING:6239.K10C8.2 EnsemblMetazoa:K10C8.2 GeneID:187257 KEGG:cel:CELE_K10C8.2 UCSC:K10C8.2 CTD:187257 WormBase:K10C8.2 eggNOG:NOG301766 HOGENOM:HOG000018665 InParanoid:Q21413 OMA:CHPFLIR NextBio:934666 Uniprot:Q21413)

HSP 1 Score: 43.5134 bits (101), Expect = 2.247e-4
Identity = 34/109 (31.19%), Postives = 57/109 (52.29%), Query Frame = 0 
Query:   37 QFITQGILMPAVSIFGIIGNSITIKVLKDRDVKLNKEFRDVLSGLATFDNLLLIFTFLLFSLPSLSK-TYKDEYFALTVPML---YPATNIFTTASRWISSLPQ-HQYV 140
            QF+ +  L P V +FGII NSI I V   + ++ N         L+  D L L+ +  +FS+P  ++ ++  EY  L+V ++   YP   I  T S +++ L   H+Y+
Sbjct:   19 QFLFRSYLFPFVYLFGIISNSINICVFSQKSMR-NHTVNWFFLALSFSDLLTLVASIFVFSVPVYAENSHNPEYIDLSVQLIVWFYPLAQIGLTMSVYVTILVSVHRYL 126
[Close]
BLAST of EMLSAG00000003117 vs. C. finmarchicus
Match: gi|592772332|gb|GAXK01182236.1| (TSA: Calanus finmarchicus comp2584416_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 46.595 bits (109), Expect = 1.897e-6
Identity = 37/96 (38.54%), Postives = 55/96 (57.29%), Query Frame = 0 
Query:   41 QGILMPAVSIFGIIGNSITIKVLKDRDVKLNKEFRDVLSGLATFDNXXXXXXXXXXXXXXXXK-TYKD--EYFALTVP-MLYPATNIFTTASRWIS 132
            +GI + +VSIFG  GN+ +I +L   D+K    F  +L  LA FDNL L+F  L +S+  +    + D  E++AL  P  LYP  NI  + S +I+
Sbjct:   10 EGIFLVSVSIFGFFGNTFSIYILSSEDMK--NSFNHLLIVLACFDNLFLVFCLLDYSMARVFHWPFSDTGEFYALLFPKFLYPLNNIAVSCSIFIT 291
[Close]
BLAST of EMLSAG00000003117 vs. C. finmarchicus
Match: gi|592901144|gb|GAXK01057231.1| (TSA: Calanus finmarchicus comp566119_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 48.1358 bits (113), Expect = 2.724e-6
Identity = 27/94 (28.72%), Postives = 45/94 (47.87%), Query Frame = 0 
Query:   28 QRKAFNMTFQFITQGILMPAVSIFGIIGNSITIKVLKDRDVKLNKEFRDVLSGLATFDNXXXXXXXXXXXXXXXXKTYKDEYFALTVPMLYPAT 121
            + K    T  FI +G+L+P ++ FGI+GN + +     +DV+L   F ++L  L+ FD            L     T  +EY+   +P + P T
Sbjct: 1174 EYKYLRTTAAFIIEGVLLPILATFGIVGNLLCVWTFNKKDVELKPSFANLLKCLSIFDT----VFLACILLQYSLPTLSEEYYIWVLPYITPYT 1443
[Close]
BLAST of EMLSAG00000003117 vs. C. finmarchicus
Match: gi|592901145|gb|GAXK01057230.1| (TSA: Calanus finmarchicus comp566119_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 48.1358 bits (113), Expect = 2.729e-6
Identity = 27/94 (28.72%), Postives = 45/94 (47.87%), Query Frame = 0 
Query:   28 QRKAFNMTFQFITQGILMPAVSIFGIIGNSITIKVLKDRDVKLNKEFRDVLSGLATFDNXXXXXXXXXXXXXXXXKTYKDEYFALTVPMLYPAT 121
            + K    T  FI +G+L+P ++ FGI+GN + +     +DV+L   F ++L  L+ FD            L     T  +EY+   +P + P T
Sbjct: 1189 EYKYLRTTAAFIIEGVLLPILATFGIVGNLLCVWTFNKKDVELKPSFANLLKCLSIFDT----VFLACILLQYSLPTLSEEYYIWVLPYITPYT 1458
[Close]
BLAST of EMLSAG00000003117 vs. C. finmarchicus
Match: gi|592953840|gb|GAXK01004713.1| (TSA: Calanus finmarchicus comp2127631_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 45.0542 bits (105), Expect = 3.786e-6
Identity = 17/62 (27.42%), Postives = 36/62 (58.06%), Query Frame = 0 
Query:   24 LQTAQRKAFNMTFQFITQGILMPAVSIFGIIGNSITIKVLKDRDVKLNKEFRDVLSGLATFD 85
            ++    + +++   F  +G+L+PA+++FGI+GN   + V   + V L   F ++L  L+ +D
Sbjct:    6 VEDCDDECWDLYIGFWIEGLLVPAIAVFGIVGNITCVFVFNHKSVDLKPSFSNILKCLSIYD 191
[Close]
BLAST of EMLSAG00000003117 vs. C. finmarchicus
Match: gi|592872401|gb|GAXK01085161.1| (TSA: Calanus finmarchicus comp5660775_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 44.669 bits (104), Expect = 5.586e-6
Identity = 20/53 (37.74%), Postives = 33/53 (62.26%), Query Frame = 0 
Query:   26 TAQRKAFNMTFQFITQGILMPAVSIFGIIGNSITIKVLKDR--DVKLNKEFRD 76
            T + + F M+  F  +G+ MPAVSI G+ GN ++I++L  R   ++LN  F +
Sbjct:    1 TRRLQIFKMSVSFWLEGVAMPAVSILGLCGNLVSIRILHSRHSSLELNPSFTN 159
[Close]
BLAST of EMLSAG00000003117 vs. L. salmonis peptides
Match: EMLSAP00000003117 (pep:novel supercontig:LSalAtl2s:LSalAtl2s174:157740:160455:1 gene:EMLSAG00000003117 transcript:EMLSAT00000003117 description:"snap-LSalAtl2s174-processed-gene-2.36")

HSP 1 Score: 306.605 bits (784), Expect = 6.809e-108
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0 
Query:    1 MEGMHFWKIKFDFTGHTRDLCVSLQTAQRKAFNMTFQFITQGILMPAVSIFGIIGNSITIKVLKDRDVKLNKEFRDVLSGLATFDNLLLIFTFLLFSLPSLSKTYKDEYFALTVPMLYPATNIFTTASRWISSLPQHQYVQQFKNREV 148
            MEGMHFWKIKFDFTGHTRDLCVSLQTAQRKAFNMTFQFITQGILMPAVSIFGIIGNSITIKVLKDRDVKLNKEFRDVLSGLATFDNLLLIFTFLLFSLPSLSKTYKDEYFALTVPMLYPATNIFTTASRWISSLPQHQYVQQFKNREV
Sbjct:    1 MEGMHFWKIKFDFTGHTRDLCVSLQTAQRKAFNMTFQFITQGILMPAVSIFGIIGNSITIKVLKDRDVKLNKEFRDVLSGLATFDNLLLIFTFLLFSLPSLSKTYKDEYFALTVPMLYPATNIFTTASRWISSLPQHQYVQQFKNREV 148
[Close]
BLAST of EMLSAG00000003117 vs. L. salmonis peptides
Match: EMLSAP00000002360 (pep:novel supercontig:LSalAtl2s:LSalAtl2s144:587968:694312:-1 gene:EMLSAG00000002360 transcript:EMLSAT00000002360 description:"augustus_masked-LSalAtl2s144-processed-gene-7.0")

HSP 1 Score: 93.5893 bits (231), Expect = 1.244e-23
Identity = 45/97 (46.39%), Postives = 61/97 (62.89%), Query Frame = 0 
Query:   34 MTFQFITQGILMPAVSIFGIIGNSITIKVLKDRDVKLNKEFRDVLSGLATFDNLLLIFTFLLFSLPSLSKTYKDEYFALTVPMLYPATNIFTTASRW 130
            MT   + +G ++P++S+ G++GN +T+ VL  R VKL K   D+L GLATFDNL LIF F +FSL +LS  Y  + F    P L PATN   T S +
Sbjct:    1 MTLSIVVEGYIVPSISVIGLLGNFLTVLVLNHRAVKLKKSLADILIGLATFDNLFLIFVFFMFSLRNLSSWYDSKIFPYVAPYLLPATNTLMTCSVY 97
[Close]
BLAST of EMLSAG00000003117 vs. L. salmonis peptides
Match: EMLSAP00000009185 (pep:novel supercontig:LSalAtl2s:LSalAtl2s582:50131:73086:1 gene:EMLSAG00000009185 transcript:EMLSAT00000009185 description:"maker-LSalAtl2s582-augustus-gene-0.5")

HSP 1 Score: 63.1586 bits (152), Expect = 1.536e-12
Identity = 32/93 (34.41%), Postives = 50/93 (53.76%), Query Frame = 0 
Query:   36 FQFITQGILMPAVSIFGIIGNSITIKVLKDRDVKLNKEFRDVLSGLATFDNLLLIFTFLLFSLPSLSKTYKDEYFALTVPMLYPATNIFTTAS 128
            F  I     MP     G++GNS++I VL++++++L   F  +L  LA FD  L++ +  +F++P  S TY    +   VP   PA  I  TAS
Sbjct:    2 FDSIIDLFFMPVTIAIGVLGNSLSIVVLRNKEIQLRDSFARILIALAVFDLTLILSSACIFTIPCFSDTYAKLLYPHIVPFFLPAAQIAMTAS 94
[Close]
BLAST of EMLSAG00000003117 vs. L. salmonis peptides
Match: EMLSAP00000008846 (pep:novel supercontig:LSalAtl2s:LSalAtl2s551:263292:299064:1 gene:EMLSAG00000008846 transcript:EMLSAT00000008846 description:"maker-LSalAtl2s551-augustus-gene-3.4")

HSP 1 Score: 58.9214 bits (141), Expect = 3.889e-11
Identity = 32/104 (30.77%), Postives = 57/104 (54.81%), Query Frame = 0 
Query:   29 RKAFNMTFQFITQGILMPAVSIFGIIGNSITIKVLKDRDVKLNKEFRDVLSGLATFDNLLLIFTFLLFSLPSLSKTYKDEYFALTVPMLYPATNIFTTASRWIS 132
            ++A  +T  FI QG+ +  +  FGIIGN ++  VL  R     K FR +L GL+ +D L +I + +LF LP +   Y++    + +P+ Y   ++    S +++
Sbjct:   49 KRAMTITVSFILQGVCLITIGCFGIIGNILSAIVL-FRSKSEKKSFRVLLIGLSFYDTLYIIMSLMLFGLPEVWIWYRNHIMMVLLPISYGLGHVARVGSVYVT 151
[Close]
BLAST of EMLSAG00000003117 vs. L. salmonis peptides
Match: EMLSAP00000010699 (pep:novel supercontig:LSalAtl2s:LSalAtl2s709:733744:748518:1 gene:EMLSAG00000010699 transcript:EMLSAT00000010699 description:"maker-LSalAtl2s709-augustus-gene-7.5")

HSP 1 Score: 56.6102 bits (135), Expect = 4.175e-10
Identity = 33/107 (30.84%), Postives = 56/107 (52.34%), Query Frame = 0 
Query:   33 NMTFQFITQGILMPAVSIFGIIGNSITIKVLKDRDVKLNKEFRDVLSGLATFDNLLLIFTFLLFSLPSLS-------KTYKDEYFALTVPMLYPATNIFTTASRWIS 132
            ++ F FI  G+L+ A+ I G+ GN I+I +L     ++      +L GLA++D++L++   L+F LPSL          Y    F    P++YP   I  T S +++
Sbjct:   16 DIIFDFIIPGVLLNAIGILGLFGNVISIVILSRP--QMRSSINCILIGLASYDSILILTGILMFGLPSLYNYTRYLFNYYYWNIFPYITPIIYPVGLIAQTGSAYLT 120
[Close]
BLAST of EMLSAG00000003117 vs. Select Arthropod Genomes
Match: gb|EEZ99319.1| (FMRFamide receptor-like Protein [Tribolium castaneum])

HSP 1 Score: 50.8322 bits (120), Expect = 2.564e-7
Identity = 30/103 (29.13%), Postives = 56/103 (54.37%), Query Frame = 0 
Query:   36 FQFITQGILMPAVSIFGIIGNSITIKVLKDRDVKLNKEFRDVLSGLATFDNLLLIFTFLLFSLPSLSK------TYKDEYFALTVPMLYPATNIFTTASRWIS 132
            ++FI  G+L+  + I GI+GN I++ +L    ++ +  +  +L GLA  D +L+I + LLF LP +        TY    +    P+++P   +  TAS +++
Sbjct:   28 YRFIINGLLLNIIGILGILGNIISMIILSRPQMRCSINY--LLIGLARIDTVLIITSILLFGLPGIYPYSGLLFTYYYIVYPHIAPVVFPLAMVVQTASVYLT 128
[Close]
BLAST of EMLSAG00000003117 vs. Select Arthropod Genomes
Match: EEB14381.1 (class A rhodopsin-like G-protein coupled receptor GPRfmr, putative [Pediculus humanus corporis])

HSP 1 Score: 49.2914 bits (116), Expect = 8.382e-7
Identity = 31/103 (30.10%), Postives = 57/103 (55.34%), Query Frame = 0 
Query:   36 FQFITQGILMPAVSIFGIIGNSITIKVLKDRDVKLNKEFRDVLSGLATFDNLLLIFTFLLFSLPSLSK------TYKDEYFALTVPMLYPATNIFTTASRWIS 132
            + F T GIL+  V+ FGI+GN I++ +L    ++ +  +  +L GLA  D +L+I + LLF LP++        TY  + +    P+++P   I  T + +++
Sbjct:   30 YAFYTNGILLNIVAFFGILGNIISMIILSRPQMRSSINY--LLIGLARCDTVLIITSILLFGLPAIHDKTGLLFTYVYKVYPHIAPVVFPLALIAQTVTVYLT 130
[Close]
BLAST of EMLSAG00000003117 vs. nr
Match: gi|926616877|ref|XP_013773577.1| (PREDICTED: FMRFamide receptor-like [Limulus polyphemus])

HSP 1 Score: 65.855 bits (159), Expect = 7.269e-10
Identity = 36/111 (32.43%), Postives = 58/111 (52.25%), Query Frame = 0 
Query:   28 QRKAFNMTFQFITQGILMPAVSIFGIIGNSITIKVLKDRDVKLNKEFRDVLSGLATFDNLLLIFTFLLFSLP------SLSKTYKDEYFALTVPMLYPATNIFTTASRWIS 132
            +   F   F FI  G+L   VS+FGI+GN I++ +L  + ++        L GLATFD  +L+   L+  LP      S+  +Y +  F + VP++YP   +  T S W++
Sbjct:   25 EEIGFESLFHFIVIGVLSTTVSLFGIVGNVISLIILSHKQMR--TSINCCLQGLATFDTAVLVTAMLMLCLPTIGSKVSMLSSYTNIIFPVIVPVVYPLGLMAQTGSVWVT 133
[Close]
BLAST of EMLSAG00000003117 vs. nr
Match: gi|985402247|ref|XP_015368879.1| (PREDICTED: FMRFamide receptor [Diuraphis noxia])

HSP 1 Score: 61.6178 bits (148), Expect = 2.139e-8
Identity = 34/107 (31.78%), Postives = 61/107 (57.01%), Query Frame = 0 
Query:   32 FNMTFQFITQGILMPAVSIFGIIGNSITIKVLKDRDVKLNKEFRDVLSGLATFDNLLLIFTFLLFSLPSLSK------TYKDEYFALTVPMLYPATNIFTTASRWIS 132
            +N+ F+FIT G+L+  + +FGI+GN I++ +L    +K +  +  +L GLA  D +L+I + LLF LP +         Y  + + L  P++YP   +  T S +++
Sbjct:   62 YNLLFEFITYGVLLNVIGVFGILGNVISMVILSRPQMKSSINY--LLIGLARCDTVLIITSMLLFGLPVIYPATGHLFNYYFKVYPLIAPVVYPIAMVSQTVSVYLT 166
[Close]
BLAST of EMLSAG00000003117 vs. nr
Match: gi|1059397483|ref|XP_017771733.1| (PREDICTED: FMRFamide receptor [Nicrophorus vespilloides] >gi|1059397486|ref|XP_017771734.1| PREDICTED: FMRFamide receptor [Nicrophorus vespilloides])

HSP 1 Score: 61.2326 bits (147), Expect = 3.644e-8
Identity = 33/105 (31.43%), Postives = 61/105 (58.10%), Query Frame = 0 
Query:   36 FQFITQGILMPAVSIFGIIGNSITIKVLKDRDVKLNKEFRDVLSGLATFDNLLLIFTFLLFSLPSL------SKTYKDEYFALTVPMLYPATNIFTTASRWISSL 134
            ++FIT GIL+  + + GI+GN I++ +L    ++ +  +  +L+GLA  D +L+I + LLF +P +       +TY    +   VP++YP   I  TAS +++ +
Sbjct:   35 YRFITNGILLNVIGVLGIVGNIISMIILSRPQMRSSINY--ILTGLARVDTVLIITSILLFGIPGIYPYTGYMRTYYFNVYPHIVPIVYPLAMIMQTASVYLTVM 137
[Close]
BLAST of EMLSAG00000003117 vs. nr
Match: gi|1028721354|ref|XP_001947807.4| (PREDICTED: FMRFamide receptor [Acyrthosiphon pisum])

HSP 1 Score: 60.8474 bits (146), Expect = 4.395e-8
Identity = 32/107 (29.91%), Postives = 61/107 (57.01%), Query Frame = 0 
Query:   32 FNMTFQFITQGILMPAVSIFGIIGNSITIKVLKDRDVKLNKEFRDVLSGLATFDNLLLIFTFLLFSLPSLSK------TYKDEYFALTVPMLYPATNIFTTASRWIS 132
            +N+ F+F+T G+L+  + +FGI+GN I++ +L    +K +  +  +L GLA  D +L++ + LLF LP +         Y  + + L  P++YP   +  T S +++
Sbjct:   59 YNLLFEFVTYGVLLNVIGLFGILGNVISMVILSRPQMKSSINY--LLIGLARCDTVLIVTSILLFGLPVVYPATGHLFNYYFKVYPLIAPVVYPIAMVSQTVSVYLT 163
[Close]
BLAST of EMLSAG00000003117 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold158_size296719-snap-gene-1.19 (protein:Tk05688 transcript:maker-scaffold158_size296719-snap-gene-1.19-mRNA-1 annotation:"hypothetical protein Y032_0065g3677")

HSP 1 Score: 60.077 bits (144), Expect = 1.223e-11
Identity = 33/94 (35.11%), Postives = 56/94 (59.57%), Query Frame = 0 
Query:   36 FQFITQGILMPAVSIFGIIGNSITIKVLKDRDVKLNKEFRDVLSGLATFDNLLLIFTFLLFSLPSLSKTYKDEYFALTVP-MLYPATNIFTTAS 128
             +F+++G++   +SI G +GN+I + +L  + V L+   R +L  LA FD++ L+ TF L+SLP LS+ Y+   + +  P  L P + I  T S
Sbjct:   36 LRFVSEGLVNTLLSILGWVGNAIAVFILLTKKVDLHGFLRHILIYLAIFDSVFLLATFALYSLPLLSEDYQQYLYKVLAPKFLIPISQIALTGS 129
[Close]
BLAST of EMLSAG00000003117 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold138_size318692-processed-gene-2.1 (protein:Tk02753 transcript:snap_masked-scaffold138_size318692-processed-gene-2.1-mRNA-1 annotation:"hypothetical protein CAPTEDRAFT_228436")

HSP 1 Score: 53.9138 bits (128), Expect = 1.903e-9
Identity = 34/102 (33.33%), Postives = 54/102 (52.94%), Query Frame = 0 
Query:   34 MTFQFITQGILMPAVSIFGIIGNSITIKVLKDRDVKLNKEFRDVLSGLATFDNLLLIFTFLLFSLPSLSKTYKDEYFAL-------TVPMLYPATNIFTTAS 128
            +TF+F+  G+L+ ++ +FGIIGN + + VL  R  K+      +L GLA  D  L+   +L+FSLP+    ++   F         + P +YP   I  TAS
Sbjct:   48 ITFEFVVHGLLILSIGLFGIIGNIVCLVVLCQR--KMRNTINCLLIGLAIADISLITTAWLMFSLPAFQIYFERRLFTKVTDIYQHSTPFVYPVGMIAQTAS 147
[Close]
BLAST of EMLSAG00000003117 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold1352_size45999-processed-gene-0.2 (protein:Tk11994 transcript:snap_masked-scaffold1352_size45999-processed-gene-0.2-mRNA-1 annotation:"fmrfamide receptor")

HSP 1 Score: 51.9878 bits (123), Expect = 6.695e-9
Identity = 34/102 (33.33%), Postives = 52/102 (50.98%), Query Frame = 0 
Query:   34 MTFQFITQGILMPAVSIFGIIGNSITIKVLKDRDVKLNKEFRDVLSGLATFDNLLLIFTFLLFSLPSLSKTYKDEYFA-------LTVPMLYPATNIFTTAS 128
            +TF+FI  G+L+ ++   GIIGN + + VL  R  ++      +L GLA  D  L+   +L+FSLP+    ++   F         T P +YP   I  TAS
Sbjct:   33 ITFEFIVHGLLILSIGFLGIIGNVLCLTVLCQR--QMRNTINCLLIGLAIADISLITTAWLMFSLPAFQIYFERRLFTKVTDIYQYTTPFVYPVGMIAQTAS 132
[Close]
BLAST of EMLSAG00000003117 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold138_size318692-processed-gene-2.2 (protein:Tk02754 transcript:snap_masked-scaffold138_size318692-processed-gene-2.2-mRNA-1 annotation:"fmrfamide receptor")

HSP 1 Score: 49.6766 bits (117), Expect = 4.898e-8
Identity = 32/106 (30.19%), Postives = 55/106 (51.89%), Query Frame = 0 
Query:   34 MTFQFITQGILMPAVSIFGIIGNSITIKVLKDRDVKLNKEFRDVLSGLATFDNLLLIFTFLLFSLPSLSKTYK-------DEYFALTVPMLYPATNIFTTASRWIS 132
            +TF+FI  G+L+  +   GIIGN + + VL    ++       +L GLA  D  L++  +L+FSLP+    ++        + +  T P +YP   I  TAS +++
Sbjct:   67 VTFEFIVHGLLILFIGFLGIIGNVLCLIVLCQPQMR--NTINCLLIGLAIIDISLIVSAWLMFSLPAFQIYFERRLLTKVSDVYQYTTPFVYPVGMIAQTASVYLT 170
[Close]
BLAST of EMLSAG00000003117 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold77_size404793-snap-gene-1.9 (protein:Tk04773 transcript:maker-scaffold77_size404793-snap-gene-1.9-mRNA-1 annotation:"GJ13605")

HSP 1 Score: 48.521 bits (114), Expect = 1.220e-7
Identity = 30/97 (30.93%), Postives = 47/97 (48.45%), Query Frame = 0 
Query:   36 FQFITQGILMPAVSIFGIIGNSITIKVLKDRDVKLNKEFRDVLSGLATFDNLLLIFTFLLFSLPSLSKTYKDEYFALTVPMLYPATNIFTTASRWIS 132
            F F  +GI +  VS+FG+ GN ++I VL     +    F ++L GLA  D L LI   L F  P L   Y +  F     +++   + F   S +++
Sbjct:  155 FSFYVEGITLTLVSLFGLFGNGLSIIVLLRPSFR--NSFSNLLRGLAFCDALFLIIAILSFGFPKLLDWYAENLFIHMTAVMFGLLHTFRVGSVYVT 249
[Close]
BLAST of EMLSAG00000003117 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold103_size370364-snap-gene-2.27 (protein:Tk07527 transcript:maker-scaffold103_size370364-snap-gene-2.27-mRNA-1 annotation:"fmrfamide receptor")

HSP 1 Score: 46.595 bits (109), Expect = 5.694e-7
Identity = 34/111 (30.63%), Postives = 56/111 (50.45%), Query Frame = 0 
Query:   23 SLQTAQRKAFNMTFQFIT---QGILMPAVSIFGIIGNSITIKVLKDRDVKLNKEFRDVLSGLATFDNLLLIFTFLLFSLPSLSKTYKDE--YFALTVPMLYPATNIFTTAS 128
            SL+  QR+        IT   +G L+ ++ + G+IGN++ I V   + V+  K F  ++  LA FD   ++ +  +F+LP  S  YK    Y+ L +P + P   I  T S
Sbjct:   16 SLERDQREQEEWNIALITRIIEGYLLTSMGLIGLIGNTLAILVFSRQRVQ--KNFHALMVTLAVFDITYILVSIAVFALPQFSVWYKQSGLYYYL-LPWILPLAQIGLTGS 123
[Close]
BLAST of EMLSAG00000003117 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold261_size233860-processed-gene-1.1 (protein:Tk10682 transcript:snap_masked-scaffold261_size233860-processed-gene-1.1-mRNA-1 annotation:"AGAP001862-PA")

HSP 1 Score: 46.595 bits (109), Expect = 6.553e-7
Identity = 33/105 (31.43%), Postives = 51/105 (48.57%), Query Frame = 0 
Query:   36 FQFITQGILMPAVSIFGIIGNSITIKVLKDRDVKLNKEFRDVLSGLATFDNLLLIFTFLLFSLPSLSKTYKDEYFALT--------VPMLYPATNIFTTASRWIS 132
            F+ +  G L+  VSI GI GN + + VL    ++       +L G+A  D +L+     LFSLP+L    ++ Y   T         P+LYP   I  TAS +++
Sbjct:   37 FEVVVHGFLILIVSIVGITGNILCLMVLGRPTMR--NSINCLLMGVAIIDMVLITSAVALFSLPTLQLFLEENYGISTEALNLYQFTPILYPMAMIAQTASVYLT 139
The following BLAST results are available for this feature:
BLAST of EMLSAG00000003117 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 2
Match NameE-valueIdentityDescription
-1.083e-528.30symbol:FMRFaR "FMRFamide Receptor" species:7227 "D... [more]
-2.247e-431.19symbol:frpr-15 "Protein FRPR-15" species:6239 "Cae... [more]
back to top
BLAST of EMLSAG00000003117 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25
Match NameE-valueIdentityDescription
gi|592772332|gb|GAXK01182236.1|1.897e-638.54TSA: Calanus finmarchicus comp2584416_c0_seq1 tran... [more]
gi|592901144|gb|GAXK01057231.1|2.724e-628.72TSA: Calanus finmarchicus comp566119_c0_seq2 trans... [more]
gi|592901145|gb|GAXK01057230.1|2.729e-628.72TSA: Calanus finmarchicus comp566119_c0_seq1 trans... [more]
gi|592953840|gb|GAXK01004713.1|3.786e-627.42TSA: Calanus finmarchicus comp2127631_c0_seq1 tran... [more]
gi|592872401|gb|GAXK01085161.1|5.586e-637.74TSA: Calanus finmarchicus comp5660775_c0_seq1 tran... [more]

Pages

back to top
BLAST of EMLSAG00000003117 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 5
Match NameE-valueIdentityDescription
EMLSAP000000031176.809e-108100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s174:15774... [more]
EMLSAP000000023601.244e-2346.39pep:novel supercontig:LSalAtl2s:LSalAtl2s144:58796... [more]
EMLSAP000000091851.536e-1234.41pep:novel supercontig:LSalAtl2s:LSalAtl2s582:50131... [more]
EMLSAP000000088463.889e-1130.77pep:novel supercontig:LSalAtl2s:LSalAtl2s551:26329... [more]
EMLSAP000000106994.175e-1030.84pep:novel supercontig:LSalAtl2s:LSalAtl2s709:73374... [more]
back to top
BLAST of EMLSAG00000003117 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of EMLSAG00000003117 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 2
Match NameE-valueIdentityDescription
gb|EEZ99319.1|2.564e-729.13FMRFamide receptor-like Protein [Tribolium castane... [more]
EEB14381.18.382e-730.10class A rhodopsin-like G-protein coupled receptor ... [more]
back to top
BLAST of EMLSAG00000003117 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 4
Match NameE-valueIdentityDescription
gi|926616877|ref|XP_013773577.1|7.269e-1032.43PREDICTED: FMRFamide receptor-like [Limulus polyph... [more]
gi|985402247|ref|XP_015368879.1|2.139e-831.78PREDICTED: FMRFamide receptor [Diuraphis noxia][more]
gi|1059397483|ref|XP_017771733.1|3.644e-831.43PREDICTED: FMRFamide receptor [Nicrophorus vespill... [more]
gi|1028721354|ref|XP_001947807.4|4.395e-829.91PREDICTED: FMRFamide receptor [Acyrthosiphon pisum... [more]
back to top
BLAST of EMLSAG00000003117 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 7
Match NameE-valueIdentityDescription
maker-scaffold158_size296719-snap-gene-1.191.223e-1135.11protein:Tk05688 transcript:maker-scaffold158_size2... [more]
snap_masked-scaffold138_size318692-processed-gene-2.11.903e-933.33protein:Tk02753 transcript:snap_masked-scaffold138... [more]
snap_masked-scaffold1352_size45999-processed-gene-0.26.695e-933.33protein:Tk11994 transcript:snap_masked-scaffold135... [more]
snap_masked-scaffold138_size318692-processed-gene-2.24.898e-830.19protein:Tk02754 transcript:snap_masked-scaffold138... [more]
maker-scaffold77_size404793-snap-gene-1.91.220e-730.93protein:Tk04773 transcript:maker-scaffold77_size40... [more]
maker-scaffold103_size370364-snap-gene-2.275.694e-730.63protein:Tk07527 transcript:maker-scaffold103_size3... [more]
snap_masked-scaffold261_size233860-processed-gene-1.16.553e-731.43protein:Tk10682 transcript:snap_masked-scaffold261... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s174supercontigLSalAtl2s174:157740..160455 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionsnap-LSalAtl2s174-processed-gene-2.36
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000003117 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000003117EMLSAT00000003117-698964Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s174:157740..160455+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000003117-685883 ID=EMLSAG00000003117-685883|Name=EMLSAG00000003117|organism=Lepeophtheirus salmonis|type=gene|length=2716bp|location=Sequence derived from alignment at LSalAtl2s174:157740..160455+ (Lepeophtheirus salmonis)
ATGGAGGGAATGCATTTTTGGAAAATTAAATTTGATTTTACGGGACATAC
TAGAGATCTCTGTGTTTCACTCCAAACAGCCCAGAGAAAAGTGGTTGGAA
AGAGCCTTCTGAGGTTGAAGAGGCCATTTTTGACACCAGCAATAAAGAAA
TCTATCTCTTCTGATAAAAACTCTTTGGAATAAGTCTTTTGAGTTATTTT
TAGACACATTTCCCTCCCCCCCCCTCAACCTACATCCTTGATTCTAACCC
TGCAGCGTCGGTCATTTAAACACTGATGCTCTTAAAGCCAATGYCAGCCA
GTACKGGAACGCCATGACATCTGCAGCGGTTACCAAAGCTTCCACGGCCT
GCCTCTATGTGGGACTATATTAATGATTAAGAGACCTCAGACACACATAT
ATTTATAGTATTAATTTGATTGAAATTCTATTTTTGATATATTAATTATA
TCTTGTTGAAGTATAAAATTCATAGTGTTCAGATTTTAATGGACCAAATC
CCTTATATATATGTATATATATTATTAAATACTAATATTTATTTAATAAT
AGTAACCAAATAATTTTCTTTACAGGCTTTCAATATGACTTTTCAATTCA
TCACTCAAGGAATTTTAATGCCGGCTGTTTCTATTTTTGGAATAATTGGA
AACTCCATCACTATTAAAGTTTTGAAGGACAGAGATGTTAAATTAAACAA
GGAATTTCGAGATGTTTTATCAGGACTCGCCACATTCGATAACCTTCTAC
TCATATTCACGTTTCTTCTCTTCAGTTTGCCTTCGCTATCCAAGACATAT
AAGGATGAATATTTTGCTCTCACCGTTCCAATGCTGTATCCAGCTACAAA
CATTTTTACAACAGCTTCTAGGTAGGTTGTGAGTATATAATTACTAATTA
GGATGGATTTAATTAATCACAAGGAATTTTGACTTTGTCATTCAAATAAA
TTTATGTTAAAATTTGTAAAACATTTTCAAGTTTAGGTATTTTTATTTGA
AGAAGGGTGTCACAACATAAATTTCTTTATTCAAAAAGCAGTCAAACAAG
TGTTTTTTTTTTAATAATGATAATAGACATTAAAAGATTTGTTTTCACAG
TTTTTGAAAATCATACCAGAAAATTGATTCATGGTTGAATAAACAAAACG
AGGGTATTTTAATACTCGGACATAATATCATTTTTCTTTAACTAGCTTTT
AATTTAGCTTAATGTTTTAGGGGGATCATTATTTGATACAAAATAAAATA
AACAAGATATCTTATTGTTTAGTTGATTGGCTAGTTAAATGGTCAGCTAC
CTACTATCTTCAATCATTATGCTGAATTACATAGCTGTGTTATAAATTAG
TGTTTACTTATTACATTTTGAAATTCAAGATGGATTTCTTCCCTGCCTCA
ACATCAATATGTACAGCAATTTAAAAATAGGGTAGGTGGCATCGAGGCCA
AAACTTAATAAACCTTTAAATCCTAAGCTGGAGGACAAAACAGTCTGAAA
TTTGGATTTTTGAGTTTTTAAATAATATTAAAATGTGTGAGGGATTCTCC
AAAGGTCATAAAGCAGTTGGTTTTTTTGTAATAAATCCGATTTTAATTTC
CCCATTTCGACCTATTGTATCAATTTAAAATTTTTGCACAACATCAAAAC
GTGATGGCACCTATTTGGCTCTCTAGGATTATTATATGTGGATTTATTTG
CTGTCAAAAAACTTAGAAAATTTCAAATTATTTTCAAGAATTGAAAAATT
GGTTTTTTTGTTTTAGAAATTGAAACAATTGAGAGATTTTCATTTATAGA
GACTAGTTCAATCTTATAAAATATTCGGTCAAGCTATTTATTGGCAATAT
TTATTTTAAACTACNCAGCCACATTCCTCACTACTACAACGCAGGATAGC
AACTGACTTTATTTCCAAGAAAACTTTAGAATCTTGCCTGTACACTCACT
TTGCTACTTCTTCCACAGTCTGATTGCCACGAATGATAGAAAATGAAGTT
TATAATTCACAAACTATTACCTAGTTCCCTATTTGTTTAGTCTAATTTTC
TTATTCTAATAAATTTAATTTATTTTACTTGAAACCCTTAGATATAAATC
TTCGGGACATCTGACATTAATATTTGAGAAGTGTTGCAATTCAACTTATT
CTTTTAAATGTCTCATTGCATTTAAAAATTACGGTATCCTCACATTTCTT
TTAATAGGTATCTTTCGGGTTCTGTAACTGATCAATTGTTTGGAACCTTG
TTAGGATTTTCTACATAAAATTACCTGTTGGGCCCATAGTTTATTCATCT
ATTTGACGAAATATGCTAAATAGATTCCATGCATATTATGTATAAGATCG
TACAATCAAAGAATAATAATTTGTAATTTACCATTTGAATCGCTCTATAA
TACAGATTTATCCTCTCCACAGCATATAACTTAAGTTATCATATGTTGAA
TATTATCCGCGTAGATACGTAGAAAACTTTTAGAATATAACAGATTTATA
AGTAAAAATAGTATTTATTAATATATAAATCTAAACCATTATTTACTTCT
TAATAAATGGTTAATAAAGCATAGGATAAGGGACCCCTGGGACAAATGAT
TTACGTCAATGTTGATTATTAAAGTATGGGAAGAAAAGGTTATATTAATC
ACAACTATGTAGTTAGAAAATATTACATTTGCCTCATTATATTTTTTATA
ATTTTAGGAAGTGTAG
back to top
Add to Basket