EMLSAG00000003145, EMLSAG00000003145-685911 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000003145
Unique NameEMLSAG00000003145-685911
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
BLAST of EMLSAG00000003145 vs. GO
Match: - (symbol:AIM1 "Absent in melanoma 1 protein" species:9606 "Homo sapiens" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575 "cellular_component" evidence=ND] [GO:0008150 "biological_process" evidence=ND] InterPro:IPR000772 Pfam:PF00652 SMART:SM00458 SUPFAM:SSF50370 PROSITE:PS50231 CAZy:CBM13 EMBL:U83116 EMBL:U83115 EMBL:AL390074 EMBL:AL359292 RefSeq:NP_001615.1 UniGene:Hs.724262 UniGene:Hs.744905 PDB:2DAD PDB:3CW3 PDBsum:2DAD PDBsum:3CW3 ProteinModelPortal:Q9Y4K1 SMR:Q9Y4K1 BioGrid:106705 STRING:9606.ENSP00000358062 PhosphoSite:Q9Y4K1 DMDM:76800646 PaxDb:Q9Y4K1 PeptideAtlas:Q9Y4K1 PRIDE:Q9Y4K1 DNASU:202 Ensembl:ENST00000369066 GeneID:202 KEGG:hsa:202 UCSC:uc003prh.3 CTD:202 GeneCards:GC06P106915 H-InvDB:HIX0006103 HGNC:HGNC:356 HPA:CAB026378 HPA:HPA030948 MIM:601797 neXtProt:NX_Q9Y4K1 PharmGKB:PA24649 eggNOG:NOG44674 HOGENOM:HOG000033870 HOVERGEN:HBG080825 InParanoid:Q9Y4K1 OMA:KARMPNS OrthoDB:EOG754HNK TreeFam:TF331078 ChiTaRS:AIM1 EvolutionaryTrace:Q9Y4K1 GeneWiki:AIM1 GenomeRNAi:202 NextBio:804 PRO:PR:Q9Y4K1 ArrayExpress:Q9Y4K1 Bgee:Q9Y4K1 CleanEx:HS_AIM1 Genevestigator:Q9Y4K1 InterPro:IPR001064 InterPro:IPR011024 Pfam:PF00030 PRINTS:PR01367 SMART:SM00247 SUPFAM:SSF49695 PROSITE:PS50915 Uniprot:Q9Y4K1)

HSP 1 Score: 47.3654 bits (111), Expect = 6.639e-5
Identity = 51/189 (26.98%), Postives = 86/189 (45.50%), Query Frame = 0
Query:    4 LLSLTILVGISLGAQDIRLYSETNL--QGPSKVVSRYEEDLQLIGFNNKAKSV-LVNGIWLLYEEVSFNRGNYNKIVTYIWGRNF--QLNTLGGINGKVSSIRYSGVDD----HSANTLNFYEGPGFMGIEQNVYKDSPKLNYDNFGKSIIITGCKPWTLYETENFGGSSICV----YPNSMSSPCKPG 179
            L SL  ++G    A  I +YSE N   +G S  V     +L+  G+  K +S+ +++G+W+ YE   F          YI  + F       GG N K+SS++   +D        N ++ +  P F G  Q+  + + +++     KS  ++G   W +Y+ ENF G+   +    YP   +  C PG
Sbjct: 1306 LQSLRPILGDFSNAHMI-MYSEKNFGSKGSSIDVLGIVANLKETGYGVKTQSINVLSGVWVAYENPDFTGEQ------YILDKGFYTSFEDWGGKNCKISSVQPICLDSFTGPRRRNQIHLFSEPQFQGHSQSFEETTSQIDDSFSTKSCRVSGGS-WVVYDGENFTGNQYVLEEGHYPCLSAMGCPPG 1486          
BLAST of EMLSAG00000003145 vs. C. finmarchicus
Match: gi|592909384|gb|GAXK01048991.1| (TSA: Calanus finmarchicus comp65445_c4_seq1 transcribed RNA sequence)

HSP 1 Score: 132.88 bits (333), Expect = 4.648e-36
Identity = 68/188 (36.17%), Postives = 106/188 (56.38%), Query Frame = 0
Query:   18 QDIRLYSETNLQGPSKVVSRYEEDLQLIGFNNKAKSVLVNGIWLLYEEVSFNRGNYNKIVTYIWGRNFQLNTLGGINGKVSSIRYSGV-DDHSANTLNFYEGPGFMGIEQNVYKDSPKLNYDNFGKSIIITGCKPWTLYETENFGGSSICVYPNSMSSPCKPGFFVEPSDFGHFADQVSSVRLGCFSK 204
            Q +  Y   N  G     + Y   L+   F+NK  S  + G+W+LY E  +N  +      + +G NF  +     + + SS+R++G  DD + +TLN Y    F+G E+  Y D  +LNYDN   S+I+TGC PWTLYE++++ GS++CV+P+S S+ C PG +       + A +VSS R GC++K
Sbjct:  151 QTMDCYDYNNSGGTRMRATDYIPALRTYNFDNKIGSCCLTGMWILYGEEDYNGYSTGAANWWAYGDNFCTDMPSQFDNQASSVRFTGAPDDWNYDTLNIYFNDFFIGDEEFTYDDKTQLNYDNRAMSVIVTGCSPWTLYESDHYTGSAMCVFPSS-STACTPGLYPTSDSLSNLAGKVSSARKGCYAK 711          
BLAST of EMLSAG00000003145 vs. C. finmarchicus
Match: gi|592805238|gb|GAXK01149330.1| (TSA: Calanus finmarchicus comp96297_c4_seq1 transcribed RNA sequence)

HSP 1 Score: 127.102 bits (318), Expect = 6.299e-34
Identity = 66/188 (35.11%), Postives = 104/188 (55.32%), Query Frame = 0
Query:   18 QDIRLYSETNLQGPSKVVSRYEEDLQLIGFNNKAKSVLVNGIWLLYEEVSFNRGNYNKIVTYIWGRNFQLNTLGGINGKVSSIRYSGV-DDHSANTLNFYEGPGFMGIEQNVYKDSPKLNYDNFGKSIIITGCKPWTLYETENFGGSSICVYPNSMSSPCKPGFFVEPSDFGHFADQVSSVRLGCFSK 204
            Q +  Y  T   G       Y   L+   ++N  +S    GIW+LY E  +N  +      + +G N  ++     +   SS+R++G  DD+  +TLN Y    F+G E+ +Y D+P LNYDN  +S+I+TGC PWTLY+ +++ GS++CV+P S +S C PG++      G  A Q SS R GC+++
Sbjct:  187 QFLDCYDYTQGGGSQFHAVEYVPSLRTYNWDNMIESCCFTGIWILYGEQDYNEYSTGGATWWAFGINNCMDVPREFSNDASSLRFTGAPDDYLYDTLNIYFSDYFIGDEEFMYNDTPLLNYDNRARSVIVTGCSPWTLYQYDHYSGSAMCVFPAS-TSDCTPGYYTTSQSLGSLAGQASSARKGCYAE 747          
BLAST of EMLSAG00000003145 vs. C. finmarchicus
Match: gi|592766454|gb|GAXK01188114.1| (TSA: Calanus finmarchicus comp10051_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 124.79 bits (312), Expect = 8.898e-33
Identity = 69/191 (36.13%), Postives = 104/191 (54.45%), Query Frame = 0
Query:   17 AQDIRLYSETNLQGPSKVVSRYEEDLQLIGFNNKAKSVLVNGIWLLYEEVSFNRGNYNKIVTYIW--GRNFQLNTLGGINGKVSSIRYSGV-DDHSANTLNFYEGPGFMGIEQNVYKDSPKLNYDNFGKSIIITGCKPWTLYETENFGGSSICVYPNSMSSPCKPGFFVEPSDFGHFADQVSSVRLGCFSK 204
            +Q +  Y  +   G S     Y   L+    +NK  S    GIW+LY E  +N   Y+   +  W  G N+ ++     + + SS+R++G  DD   +TLN Y    F+G E+  Y D P+LNYDN  +SII+TGC  WT+Y+ +N+ G+++C++P   SS C PG +      G  A QVSS R GC++K
Sbjct:   60 SQFLDCYDYSGGSGNSVRAIDYIPALRTYNMDNKIGSCCFTGIWILYAEEDYN--GYSTGASNWWASGDNYCIDVPAQFDNQASSLRFTGAPDDWKYDTLNIYFNDYFIGDEEFTYNDMPQLNYDNRARSIIVTGCDAWTIYQYDNYQGNAMCLFPGD-SSACNPGLYPNSQTLGSLAGQVSSARRGCYAK 623          
BLAST of EMLSAG00000003145 vs. C. finmarchicus
Match: gi|592909390|gb|GAXK01048985.1| (TSA: Calanus finmarchicus comp65445_c2_seq1 transcribed RNA sequence)

HSP 1 Score: 109.383 bits (272), Expect = 4.743e-28
Identity = 52/127 (40.94%), Postives = 81/127 (63.78%), Query Frame = 0
Query:   79 YIWGRNFQLNTLGGINGKVSSIRYSGV-DDHSANTLNFYEGPGFMGIEQNVYKDSPKLNYDNFGKSIIITGCKPWTLYETENFGGSSICVYPNSMSSPCKPGFFVEPSDFGHFADQVSSVRLGCFSK 204
            + +G NF  +     + + SS+R++G  DD + +TLN Y    F+G E+  Y D  +LNYDN   S+I+TGC PWTLYE++++ GS++CV+P+S S+ C PG +       + A +VSS R GC++K
Sbjct:   45 WAYGDNFCTDMPSQFDNQASSVRFTGAPDDWNYDTLNIYFNDFFIGDEEFTYDDKTQLNYDNRAMSVIVTGCSPWTLYESDHYTGSAMCVFPSS-STACTPGLYPTSDSLSNLAGKVSSARKGCYAK 422          
BLAST of EMLSAG00000003145 vs. C. finmarchicus
Match: gi|592909389|gb|GAXK01048986.1| (TSA: Calanus finmarchicus comp65445_c2_seq2 transcribed RNA sequence)

HSP 1 Score: 106.301 bits (264), Expect = 3.789e-27
Identity = 50/113 (44.25%), Postives = 75/113 (66.37%), Query Frame = 0
Query:   93 INGKVSSIRYSGV-DDHSANTLNFYEGPGFMGIEQNVYKDSPKLNYDNFGKSIIITGCKPWTLYETENFGGSSICVYPNSMSSPCKPGFFVEPSDFGHFADQVSSVRLGCFSK 204
             + K SS+R++G  DD + +TLN Y    F+G E+  Y D  +LNYDN   S+I+TGC PWTLYE++++ GS++CV+P+S S+ C PG +       + A +VSS R GC++K
Sbjct:   17 FDNKASSVRFTGAPDDWNYDTLNIYFNDFFIGDEEFTYDDKTQLNYDNRAMSVIVTGCSPWTLYESDHYTGSAMCVFPSS-STACTPGLYPTSDSLSNLAGKVSSARKGCYAK 352          
BLAST of EMLSAG00000003145 vs. C. finmarchicus
Match: gi|592909388|gb|GAXK01048987.1| (TSA: Calanus finmarchicus comp65445_c2_seq3 transcribed RNA sequence)

HSP 1 Score: 99.3673 bits (246), Expect = 9.243e-25
Identity = 47/105 (44.76%), Postives = 70/105 (66.67%), Query Frame = 0
Query:  101 RYSGV-DDHSANTLNFYEGPGFMGIEQNVYKDSPKLNYDNFGKSIIITGCKPWTLYETENFGGSSICVYPNSMSSPCKPGFFVEPSDFGHFADQVSSVRLGCFSK 204
            R++G  DD + +TLN Y    F+G E+  Y D  +LNYDN   S+I+TGC PWTLYE++++ GS++CV+P+S S+ C PG +       + A +VSS R GC++K
Sbjct:    1 RFTGAPDDWNYDTLNIYFNDFFIGDEEFTYDDKTQLNYDNRAMSVIVTGCSPWTLYESDHYTGSAMCVFPSS-STACTPGLYPTSDSLSNLAGKVSSARKGCYAK 312          
BLAST of EMLSAG00000003145 vs. C. finmarchicus
Match: gi|592798422|gb|GAXK01156146.1| (TSA: Calanus finmarchicus comp284306_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 95.9005 bits (237), Expect = 9.271e-23
Identity = 65/214 (30.37%), Postives = 110/214 (51.40%), Query Frame = 0
Query:    3 VLLSLTILVGISLG---------AQDIRLYSETNLQGPSKVVSRYEEDLQLIGFNNKAKSVLVNGIWLLYEEVSFNRGNYNKIVTYIWGRNFQLNTLGGINGKVSSIRYSGVD-DHSANTLNFYEGPGFMGIEQN-VYKDSPKLNYDNFGKSIIITGCKPWTLYETENFGGSSICVYPNSMSSPCKPGFFVEPSDFGHFADQVSSVRLGCFSKS 205
            V LS+ + +G +LG          Q I  +++   +G S+V +    DL    F++   S    G W+LY +  FN  +      +I+G    L+     N + SS+RY+G   D   +++N Y G  F G E   ++KD+P L   +  +SII++G   WTLYE EN+ G ++CV+P+ ++  C+P F+ +      FA  V S++ GC + +
Sbjct:   53 VFLSI-LFLGFALGEPAPGTRAIQQKIECFTQPGGEGLSEVFADAITDLSKYSFDDTITSCCATGTWILYADADFNSEDLGASSYWIYGDGTCLDVPDLFNNQASSLRYAGSKADWCFDSINLYYGLYFSGYESEWIFKDTPGLGSVS-AQSIIVSGGSAWTLYEGENYQGRAVCVFPD-VAGGCQPEFYFD------FA-LVGSIKKGCLADA 664          
BLAST of EMLSAG00000003145 vs. C. finmarchicus
Match: gi|592806332|gb|GAXK01148236.1| (TSA: Calanus finmarchicus comp1026702_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 80.4925 bits (197), Expect = 3.534e-18
Identity = 35/79 (44.30%), Postives = 51/79 (64.56%), Query Frame = 0
Query:  125 EQNVYKDSPKLNYDNFGKSIIITGCKPWTLYETENFGGSSICVYPNSMSSPCKPGFFVEPSDFGHFADQVSSVRLGCFS 203
            E+ +Y D   L  DN  KS+I+ GC  WTLY+ +N+ G+++CV+P+ M + C PGF+ +    G  A QVSS R GCF+
Sbjct:    3 EEFMYNDMGTLKNDNRAKSVIVAGCSAWTLYQYDNYQGAALCVFPSHMGN-CNPGFYSDSEQLGVLAGQVSSARRGCFA 236          
BLAST of EMLSAG00000003145 vs. C. finmarchicus
Match: gi|592953641|gb|GAXK01004912.1| (TSA: Calanus finmarchicus comp5770152_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 73.559 bits (179), Expect = 1.819e-15
Identity = 42/133 (31.58%), Postives = 72/133 (54.14%), Query Frame = 0
Query:   79 YIWGRNFQLNTLGGINGKVSSIRYSG--VDDHSANTL-----NFYEGPGFMGIEQNVYKDSPKLNYDNFGKSIIITGCKPWTLYETENFGGSSICVYPNSMSSPCKPGFFVEPSDFGHFADQVSSVRLGCFSK 204
            + +G +F  N   G   K SS +Y G    D  A+++     NF+ G      +   +     +      +S+I+T C+P+T+YE  ++ G +ICV+P+S ++ C PGF+ E    G+F+ +V S+R GCF+K
Sbjct:   39 WAYGDDFDTNVPAGFENKASSAKYVGPYFKDWKADSITLFLHNFFHGQALWTPDNVEWCSMSTIQ----TRSLIVTECRPFTIYEKWDYQGDAICVFPSS-TNFCNPGFYSESEMLGNFSGKVYSIRKGCFAK 422          
BLAST of EMLSAG00000003145 vs. C. finmarchicus
Match: gi|592909385|gb|GAXK01048990.1| (TSA: Calanus finmarchicus comp65445_c2_seq6 transcribed RNA sequence)

HSP 1 Score: 65.855 bits (159), Expect = 5.206e-13
Identity = 27/59 (45.76%), Postives = 42/59 (71.19%), Query Frame = 0
Query:  146 ITGCKPWTLYETENFGGSSICVYPNSMSSPCKPGFFVEPSDFGHFADQVSSVRLGCFSK 204
            +TGC PWTLYE++++ GS++CV+P+S S+ C PG +       + A +VSS R GC++K
Sbjct:    1 VTGCSPWTLYESDHYTGSAMCVFPSS-STACTPGLYPTSDSLSNLAGKVSSARKGCYAK 174          
BLAST of EMLSAG00000003145 vs. L. salmonis peptides
Match: EMLSAP00000003799 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2069:15746:16444:1 gene:EMLSAG00000003799 transcript:EMLSAT00000003799 description:"augustus_masked-LSalAtl2s2069-processed-gene-0.2")

HSP 1 Score: 141.739 bits (356), Expect = 4.536e-41
Identity = 79/216 (36.57%), Postives = 112/216 (51.85%), Query Frame = 0
Query:    3 VLLSLTILVGISLGAQDIRLYSETNLQGPSKVVSRYEEDLQLIGFNNKAKSVLVNGIWLLYEEVSFNRGNYNKIVTYIWGRNFQLNTLGGINGKVSSIRYSGV-DDHSANTLNFYEGPGFMGIEQNVYKDSPKLNYDNFGKSIIITGCKPWTLYETENFGGSSICVYPNSMSSPCKPGFFVEPSDFGHFADQVSSVRLGCFSKSSFVAKPFIEGES 217
            +L     +  +S     I +Y + N  G  +    YE+DL    F+NK  S  + GIWL YE   +N      +  +I G ++          + SS+R SGV   +   ++NFYE  GF G E+    D+P    DNFG SII+TGC PWTLYE + F G  ICVYP+  ++ C PGFF    +   F  +VSSVR+GCFS    ++ PF+   +
Sbjct:    6 ILFLFLFVCYVSAITNKITVYDQMNYYGNQQTFYGYEDDLSSTRFDNKICSARLTGIWLFYEHTKYNSHKMG-MSFFIXGXSYXEPDFKDFKNRASSLRNSGVGSSYKDKSINFYEREGFAGEEEYFSNDTPYFRKDNFGDSIIVTGCSPWTLYEEKYFAGDHICVYPSDENN-CLPGFFPNLENLPQFDGKVSSVRVGCFSDRK-ISSPFLPANA 218          
BLAST of EMLSAG00000003145 vs. L. salmonis peptides
Match: EMLSAP00000000780 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1127:109598:110255:-1 gene:EMLSAG00000000780 transcript:EMLSAT00000000780 description:"snap_masked-LSalAtl2s1127-processed-gene-0.4")

HSP 1 Score: 63.1586 bits (152), Expect = 7.616e-13
Identity = 41/107 (38.32%), Postives = 57/107 (53.27%), Query Frame = 0
Query:  107 DHSANTLNFYEGPGFMGIEQNVYKDSPKLNYDNFGKSIIITGCKPWTLYETENFGGSSICVYPNSMSSPCKPGFFVEPSDFGHFADQVSSVRLGCFSKSSF--VAKP 211
            + + NT++ Y G GFMG  Q ++  S   +   +G      G +PW LY    + G  I VY +S+   C+P F++E  D G F  +VSS RL CFSK  F  VA P
Sbjct:   49 NRTYNTISLYNGHGFMGNTQ-MFDFSTGFS-AQYGDGKSDKGYQPWNLYSERGYKGDYISVYSSSIEK-CEPAFYLELKDIGPFGVKVSSSRLECFSKYIFKGVAVP 152          
BLAST of EMLSAG00000003145 vs. L. salmonis peptides
Match: EMLSAP00000005933 (pep:novel supercontig:LSalAtl2s:LSalAtl2s320:21267:21614:-1 gene:EMLSAG00000005933 transcript:EMLSAT00000005933 description:"augustus_masked-LSalAtl2s320-processed-gene-0.0")

HSP 1 Score: 54.6842 bits (130), Expect = 4.800e-10
Identity = 32/103 (31.07%), Postives = 52/103 (50.49%), Query Frame = 0
Query:   89 TLGGINGKVSSIRYSGVDDHSANTLNFYEGPGFMGIEQNVYKDSPKLNYDNFGKSIIITGCKPWTLYETENFGGSSICVYPNSMSSPCKPGFFVEPSDFGHFA 191
            T+  +    S++R     + S NT+N Y+G  FM   Q     +        GKSII+  C+PW LY    + G  I VY +S+ + C+PGF+++ + +  F 
Sbjct:   13 TVDTLENSQSTVRERIPKNMSFNTINQYDGHKFMANTQMFDFGAGFFVQHGVGKSIIVAVCQPWILYSERGYKGDHIGVYCSSIEN-CEPGFYLKQTGYWSFC 114          
BLAST of EMLSAG00000003145 vs. Select Arthropod Genomes
Match: EFX90166.1 (hypothetical protein DAPPUDRAFT_299971 [Daphnia pulex])

HSP 1 Score: 107.457 bits (267), Expect = 8.598e-28
Identity = 75/220 (34.09%), Postives = 114/220 (51.82%), Query Frame = 0
Query:    2 KVLLSLTILVGISLGAQD---IRLYS-ETNLQGPSKVVSRYEEDLQLIGFNNKAKS-VLVNGIWLLYEEVSFNRGNYNKIVTYIWGRNFQLNTLGGINGKVSSIRYSGVD-DHSANTLNFYEGPGFMGIEQNVYKDSPKLNYDNFGKSIIITGCKPWTLYETENFGGSSICVYPNSMSSPCKPGFFVEPSDFGHFADQVSSVRLGCFSKSSF----VAKP 211
            KVL+ L  L    +  Q    + LY    N  G   +++ Y ++LQ   FN+ A S  +V GIWL+YE  S+N  N+     + WG N+  +   G+N +VSS+RY+G      A+ LN Y+   F   E     DS  L+   +G S+I+TG   WT+Y++ N+ G  +CV P  ++    PGFF + S+FG     + S R GC+++  F    V KP
Sbjct:   10 KVLIFLNFLAFSLIHGQSDHTLHLYDGAMNSPGSWIIINNYVDNLQNSAFNDLASSFCVVRGIWLMYENPSYN-SNFLGASAFYWGENYCQDLPTGLNNQVSSVRYAGSPYSFQADALNVYQVEWFQSYEAFTASDSLDLS-PYYGGSLIVTGRSYWTIYDSPNYQGYHVCVTPADITY-AYPGFFTQASEFGFSGRVIRSARRGCWTEKVFRPTMVMKP 226          
BLAST of EMLSAG00000003145 vs. nr
Match: gi|1067073077|ref|XP_018020009.1| (PREDICTED: uncharacterized protein LOC108676448 [Hyalella azteca])

HSP 1 Score: 70.4774 bits (171), Expect = 4.323e-11
Identity = 58/211 (27.49%), Postives = 96/211 (45.50%), Query Frame = 0
Query:    1 MKVLLSLTILVGISLGAQDIR---LYSETNLQGPSKVVSRYEEDLQLIGFNNKAKSVLVNGIWLLYEEVSFNRGNYNKIVTYIWGRNFQLNTLG-GINGKVSSIRYSGVDDHSANTL-NFYEGPGFMGIEQNVYKDSPKL-NYDNFGKSIIITGCKPWTLYETENFGGSSICVYPNSMSS----PCKPGFFVEPSDFGHFADQVSSVRLGC 201
            + VL S + + G++    D R    YSE +  G +     Y  +L ++  NN   SV   G W+LY+ +++     ++ V+ I+       T       + SS+RY+G      N   N Y+     G E    KD+  L ++D    S+++TG   WT Y   N+ G  +C+YP+   +        GF  + S+FG   + + SVR GC
Sbjct:   12 LLVLASSSPIEGVTARPDDFRYLTAYSEPDSIGENYTFYEYTPELSVVMMNNVIDSVCATGFWILYDSINY----IDRFVSCIYHGVSACATFAPACQNRASSLRYAGSPYGLNNDYYNLYQEIYLGGEEFRGEKDAADLGDFDLTISSLVVTGQSAWTFYRGLNYTGLPMCMYPDGHYTNDGIDIDYGFIFDMSEFGWPDNSIRSVRRGC 218          
BLAST of EMLSAG00000003145 vs. nr
Match: gi|1067094351|ref|XP_018009063.1| (PREDICTED: uncharacterized protein LOC108666655 isoform X3 [Hyalella azteca])

HSP 1 Score: 69.707 bits (169), Expect = 6.125e-11
Identity = 52/161 (32.30%), Postives = 77/161 (47.83%), Query Frame = 0
Query:   18 QDIRLYSETNLQGPSKVVSRYEEDLQLIGFNNKAKSVLVNGIWLLYEEVSFNRGNYNKIVTYIWGRNFQLNTLGGIN-------GKVSSIRYSGVDDHSANTL-NFYEGPGFMGIEQNVYKDSPKLNY-DNFGKSIIITGCKPWTLYETENFGGSSICVYP 169
            +++  Y+ +   GP      Y  DL+  G +N  K V   G+WLLY+      G Y  +     G     N  G  N        K+SS+RY+G  +   N   N YEG GF G E    K++P ++Y D    S+I +G  PWT +  +N+ G ++CVYP
Sbjct:   29 RNLNAYNNSAADGPYYEFLDYAPDLRDQGMDNSIKVVCGTGVWLLYD------GYYYGVEK--EGPALFANGYGCANYTNSYYYDKISSLRYAGSPNGFDNAYYNLYEGGGFTGNEFKGNKNAPDVSYLDMKVSSLITSGESPWTFFTGQNYTGEAVCVYP 181          
BLAST of EMLSAG00000003145 vs. nr
Match: gi|1067096753|ref|XP_018010344.1| (PREDICTED: uncharacterized protein LOC108667785 [Hyalella azteca])

HSP 1 Score: 70.4774 bits (171), Expect = 6.546e-11
Identity = 51/165 (30.91%), Postives = 78/165 (47.27%), Query Frame = 0
Query:   20 IRLYSETNLQGPSKVVSRYEEDLQLIGFNNKAKSVLVNGIWLLYEEVSFNRGNYNKIVTYIWG-------RNFQLNTLGGINGKVSSIRYSGVDDHSANTL-NFYEGPGFMGIE--QNVYKDSPKLNYDNFGKSIIITGCKPWTLYETENFGGSSICVYPNSMSS 174
            ++ Y   +  GP      Y  DL+  G +N  K V + GIW LY +      NY++  T +WG        +F+L          SS+RY+G   H  ++  N YEG  + G E   N   DS  L +D    S+II G  PWT +    F G ++C+YP ++++
Sbjct:   31 LKAYISDDPDGPYHEFLDYSPDLRDQGLDNSIKRVCLTGIWFLYSDY-----NYSEESTELWGPVRVNGCLDFELTL------STSSLRYAGSPYHLDDSYYNLYEGINYCGREFRGNTNADS-LLEFDLRVSSVIICGQSPWTFFTGLQFTGEAVCLYPANIAT 183          
BLAST of EMLSAG00000003145 vs. nr
Match: gi|1067091229|ref|XP_018007389.1| (PREDICTED: uncharacterized protein LOC108665172 [Hyalella azteca])

HSP 1 Score: 68.9366 bits (167), Expect = 1.465e-10
Identity = 59/202 (29.21%), Postives = 86/202 (42.57%), Query Frame = 0
Query:   16 GAQDIRL---YSETNLQGPSKVVSRYEEDLQLIGFNNKAKSVLVNGIWLLYEEVSFNRGNYNKIVTYIWGRNFQLNTLGGINGKVSSIRYSGV-----DDHSANTLNFYEGPGFMGIEQNVYKDSPKL-NYDNFGKSIIITGCKPWTLYETENFGGSSICVYPNSM----SSPCKPGFFVEPSDFGHFADQVSSVRLGCFSK 204
            GA D R    Y+  N  G       Y  DL  +  +N  +S    G+W LY  V+++  +      +I G N+  N +      VSS+RY+G      DD+     N YEG  F G E     ++  L + D    S+++TG   WT Y   NF GS++CVY +      S       F    + G   + + SV  GC S 
Sbjct:   24 GADDSRYFIGYAGLNYTGAHYQFIDYMPDLSEVQMDNTIESSCATGVWNLYNAVNYDLNSNESRCIFI-GINWCGNWITQCQNMVSSLRYTGSPYGLNDDY----YNLYEGTSFRGREFRGNTNAADLGDLDMAVSSLVVTGQSAWTFYTDVNFTGSNVCVYADEHYANGSIHLDFARFYTMDELGMADNSIRSVARGCLSD 220          
BLAST of EMLSAG00000003145 vs. nr
Match: gi|1067061422|ref|XP_018018173.1| (PREDICTED: uncharacterized protein LOC108674716 [Hyalella azteca])

HSP 1 Score: 68.1662 bits (165), Expect = 4.669e-10
Identity = 64/239 (26.78%), Postives = 104/239 (43.51%), Query Frame = 0
Query:    4 LLSLTILVGISLGAQD--------IRLYSETNLQGPSKVVSRYEEDLQLIGFNNKAKSVLVNGIWLLYEEVSFNRGNYNKIVTYIWGRNFQLNTLGGINGKVSSIRYS----GVDDHSANTLNFYEGPGFMGIEQNVYKDSPKL-NYDNFGKSIIITGCKPWTLYETENFGGSSICVYPNSMSS----PCKPGFFVEPSDFGHFADQVSSVRLGCFSKSSFVAKPFIEGESKSINLIEN 225
            +L+  + V   + AQD        ++ Y +T+  GP      Y  DL + G +N  K V + G WLLYE  S+   +Y     +  G     + L  +   VSS+RY+    G+DD      N Y G  + G E     D   L ++D    S++I+G  PWT +    F G +ICV P  ++          +    +D G   + + SV  GC S + +  KP     ++ +  +E+
Sbjct:    7 MLATLVAVISCISAQDTEYADKRYLKAYFDTDPDGPYLEFDSYSSDLIVEGVDNIIKRVCMTGDWLLYEGSSYFGSSY-----FYPGAIDSCHNLPSV-ASVSSLRYAGSPIGLDD---IYFNLYTGAYYTGAEMTGNADLGNLGSFDLAISSLVISGQSPWTFFTGTQFDGVAICVRPTFLTDNNGVSYHHAYVNLVADLGIPDNSIRSVARGCKSGNVYRGKPRNVQHAEDLQPMEH 236          
BLAST of EMLSAG00000003145 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold94_size379870-snap-gene-2.32 (protein:Tk09637 transcript:maker-scaffold94_size379870-snap-gene-2.32-mRNA-1 annotation:"gamma-crystallin a")

HSP 1 Score: 169.474 bits (428), Expect = 2.717e-50
Identity = 93/228 (40.79%), Postives = 128/228 (56.14%), Query Frame = 0
Query:    1 MKVLLSLTILVGIS--LGA---------------QDIRLYSETNLQGPSKVVSRYEEDLQLIGFNNKAKSVLVNGIWLLYEEVSFNRGNYNKIVTYIWGRNFQLNTLGGINGKVSSIRYSGVDD-HSANTLNFYEGPGFMGIEQNVYKDSPKLNYDNFGKSIIITGCKPWTLYETENFGGSSICVYPNSMSSPCKPGFFVEPSDFGHFADQVSSVRLGCFSKSSFVAK 210
            MKV ++L  LV IS  LG+               Q I  Y     +G    VS YE +L    F+N A S   NGIW+LY+   +N  N   +V   WG  +  +     + + SSIR++G  D +  +T+NFYEG  FMG+EQ  Y D+P+ NYDN G+S+I+TGC PWT+Y+ +N+ G S C+YP+   + C P FF EPSD G  +DQVSS + GCFS +    K
Sbjct:    1 MKVFIALA-LVAISGALGSKPSMFPKSAKSGQENQYIDCYDFPGYEGIGFRVSDYETNLAESDFDNMASSCCFNGIWILYDLPDYNANNLEAVVFNGWGEGYCTDFPADFDNRASSIRFAGAPDGYKYDTINFYEGKNFMGLEQFFYDDAPQFNYDNLGRSVIVTGCSPWTIYQYDNYQGYSACLYPSDTEN-CYPSFFPEPSDLGFLSDQVSSAKKGCFSNNKIHGK 226          

HSP 2 Score: 168.703 bits (426), Expect = 5.330e-50
Identity = 84/194 (43.30%), Postives = 116/194 (59.79%), Query Frame = 0
Query:   18 QDIRLYSETNLQGPSKVVSRYEEDLQLIGFNNKAKSVLVNGIWLLYEEVSFNRGNYNKIVTYIWGRNFQLNTLGGINGKVSSIRYSGVDD-HSANTLNFYEGPGFMGIEQNVYKDSPKLNYDNFGKSIIITGCKPWTLYETENFGGSSICVYPNSMSSPCKPGFFVEPSDFGHFADQVSSVRLGCFSKSSFVAK 210
            Q +  Y      G S  VS YE +L    F+N A S   NGIW+LY+   +N  N    V   WG ++  +     + K SSIR+SG  D +  +T+NFYEG  FMG+EQ  Y D+P+ NYDN G+S+I+TGC PWT+Y+ +N+ G S C+YP+  ++ C P FF +PSD G  +DQVSS + GCFS +    K
Sbjct:  270 QYMDCYDLKGQGGISFRVSDYETNLAQSSFDNMASSCCFNGIWILYDLPDYNANNLEAAVFNGWGESYCADFAADFDNKASSIRFSGAPDGYKYDTINFYEGKNFMGLEQFFYDDAPQFNYDNLGRSVIVTGCSPWTIYQYDNYQGYSACLYPSDTAN-CYPSFFPDPSDLGFLSDQVSSTKKGCFSNNKIHGK 462          
BLAST of EMLSAG00000003145 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold94_size379870-snap-gene-2.28 (protein:Tk09640 transcript:maker-scaffold94_size379870-snap-gene-2.28-mRNA-1 annotation:"beta-crystallin b1")

HSP 1 Score: 154.066 bits (388), Expect = 9.153e-47
Identity = 85/220 (38.64%), Postives = 119/220 (54.09%), Query Frame = 0
Query:    1 MKVLLSLTILVGISLGA---------------QDIRLYSETNLQGPSKVVSRYEEDLQLIGFNNKAKSVLVNGIWLLYEEVSFNRGNYNKIVTYIWGRNFQLNTLGGINGKVSSIRYSGVDD-HSANTLNFYEGPGFMGIEQNVYKDSPKLNYDNFGKSIIITGCKPWTLYETENFGGSSICVYPNSMSSPCKPGFFVEPSDFGHFADQVSSVRLGCFSK 204
            MK L+    LV +S                  Q +  +   N  G S   + Y   L    F+N+  S   NGIW+LYE+  +N G  + +    WG N+ +N    ++ K SS+R+SG  D +  +T+N YEG  FMG+EQ +Y D+ ++NYDNFG+S+I+TGC PWT Y+ +NF G S C YP S +  C P FF    D G    Q+SS+R GCFSK
Sbjct:    9 MKTLIIFAALVALSRAVLHQKPLFKADEPTQNQFMDCFDYANQGGYSFRFTDYAPTLNQNNFDNRISSCCFNGIWILYEQEQYNTGLQSAVFN-GWGENYCVNLDSAMDNKASSVRFSGAPDGYKYDTINLYEGDYFMGMEQFLYDDAYQMNYDNFGRSMIVTGCSPWTAYQYDNFQGYSKCFYP-SDTQQCHPAFFTS-QDLGSMDRQISSLRRGCFSK 225          
BLAST of EMLSAG00000003145 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold94_size379870-snap-gene-2.29 (protein:Tk09638 transcript:maker-scaffold94_size379870-snap-gene-2.29-mRNA-1 annotation:"gamma-crystallin d")

HSP 1 Score: 145.206 bits (365), Expect = 2.415e-43
Identity = 74/207 (35.75%), Postives = 118/207 (57.00%), Query Frame = 0
Query:    6 SLTILVGISLGAQDIRLYSETNLQGPS-KVVSRYEEDLQLIGFNNKAKSVLVNGIWLLYEEVSFNRGNYNKIVTYIWGRNFQLNTLGGINGKVSSIRYSGVDD-HSANTLNFYEGPGFMGIEQNVYKDSPKLNYDNFGKSIIITGCKPWTLYETENFGGSSICVYPNSMSSPCKPGFFVEPSDFGHFADQVSSVRLGCFSKSSFVAK 210
            +L +  G +   Q IR +   +L G   ++  +   DL    F+N+A +    G+W+LYE   +N  NY   V   WG  +  +     + K SS+R++G  D ++ + L  Y G  F+G EQ  Y ++P+LN+  FG+S I+ GC PWTLY  +N+ G++IC++P   S+ C PGFF +P D G  A+ VSSV+ GC +K+ F+ +
Sbjct:   35 TLGLGRGSASNGQSIRCFDHADLSGEKLELDEKSVADLTTFNFDNQASACCFYGVWILYENPGYNNDNYQAAVYTGWGEEYCSSFPTTFDNKASSLRFAGAPDGYNYDVLTLYAGDYFIGREQYFYDEAPQLNFAKFGRSAIVNGCSPWTLYSEDNYKGNAICLHPADESN-CYPGFFPKPIDLGILANVVSSVKRGCHAKAIFLPR 240          
BLAST of EMLSAG00000003145 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold383_size189472-snap-gene-0.40 (protein:Tk11353 transcript:maker-scaffold383_size189472-snap-gene-0.40-mRNA-1 annotation:"mrna-decapping enzyme 2")

HSP 1 Score: 56.225 bits (134), Expect = 1.642e-9
Identity = 29/81 (35.80%), Postives = 43/81 (53.09%), Query Frame = 0
Query:   27 NLQGPSKVVSRYEEDLQLIGFNNKAKSVLVNGIWLLYEEVSFNRGNYNKIVTYIWGRNFQLNTLGGINGKVSSIRYSGVDD 107
            N  G S V+     DL+   F+N+A S    GIW+L++  ++N  N+N ++   WG N  +N  GG N + SS R  G  D
Sbjct:  407 NQVGDSVVLVNNAVDLRQFAFDNRASSCCFQGIWILFDLPNYNALNFNAVMYSGWGENMCVNFDGGFNNRASSARVGGAPD 487          
The following BLAST results are available for this feature:
BLAST of EMLSAG00000003145 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 1
Match NameE-valueIdentityDescription
-6.639e-526.98symbol:AIM1 "Absent in melanoma 1 protein" species... [more]
back to top
BLAST of EMLSAG00000003145 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 14
Match NameE-valueIdentityDescription
gi|592909384|gb|GAXK01048991.1|4.648e-3636.17TSA: Calanus finmarchicus comp65445_c4_seq1 transc... [more]
gi|592805238|gb|GAXK01149330.1|6.299e-3435.11TSA: Calanus finmarchicus comp96297_c4_seq1 transc... [more]
gi|592766454|gb|GAXK01188114.1|8.898e-3336.13TSA: Calanus finmarchicus comp10051_c0_seq1 transc... [more]
gi|592909390|gb|GAXK01048985.1|4.743e-2840.94TSA: Calanus finmarchicus comp65445_c2_seq1 transc... [more]
gi|592909389|gb|GAXK01048986.1|3.789e-2744.25TSA: Calanus finmarchicus comp65445_c2_seq2 transc... [more]
gi|592909388|gb|GAXK01048987.1|9.243e-2544.76TSA: Calanus finmarchicus comp65445_c2_seq3 transc... [more]
gi|592798422|gb|GAXK01156146.1|9.271e-2330.37TSA: Calanus finmarchicus comp284306_c0_seq1 trans... [more]
gi|592806332|gb|GAXK01148236.1|3.534e-1844.30TSA: Calanus finmarchicus comp1026702_c0_seq1 tran... [more]
gi|592953641|gb|GAXK01004912.1|1.819e-1531.58TSA: Calanus finmarchicus comp5770152_c0_seq1 tran... [more]
gi|592909385|gb|GAXK01048990.1|5.206e-1345.76TSA: Calanus finmarchicus comp65445_c2_seq6 transc... [more]

Pages

back to top
BLAST of EMLSAG00000003145 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 13
Match NameE-valueIdentityDescription
EMLSAP000000037994.536e-4136.57pep:novel supercontig:LSalAtl2s:LSalAtl2s2069:1574... [more]
EMLSAP000000007807.616e-1338.32pep:novel supercontig:LSalAtl2s:LSalAtl2s1127:1095... [more]
EMLSAP000000059334.800e-1031.07pep:novel supercontig:LSalAtl2s:LSalAtl2s320:21267... [more]

Pages

back to top
BLAST of EMLSAG00000003145 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of EMLSAG00000003145 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 1
Match NameE-valueIdentityDescription
EFX90166.18.598e-2834.09hypothetical protein DAPPUDRAFT_299971 [Daphnia pu... [more]
back to top
BLAST of EMLSAG00000003145 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25
Match NameE-valueIdentityDescription
gi|1067073077|ref|XP_018020009.1|4.323e-1127.49PREDICTED: uncharacterized protein LOC108676448 [H... [more]
gi|1067094351|ref|XP_018009063.1|6.125e-1132.30PREDICTED: uncharacterized protein LOC108666655 is... [more]
gi|1067096753|ref|XP_018010344.1|6.546e-1130.91PREDICTED: uncharacterized protein LOC108667785 [H... [more]
gi|1067091229|ref|XP_018007389.1|1.465e-1029.21PREDICTED: uncharacterized protein LOC108665172 [H... [more]
gi|1067061422|ref|XP_018018173.1|4.669e-1026.78PREDICTED: uncharacterized protein LOC108674716 [H... [more]

Pages

back to top
BLAST of EMLSAG00000003145 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 4
Match NameE-valueIdentityDescription
maker-scaffold94_size379870-snap-gene-2.322.717e-5040.79protein:Tk09637 transcript:maker-scaffold94_size37... [more]
maker-scaffold94_size379870-snap-gene-2.289.153e-4738.64protein:Tk09640 transcript:maker-scaffold94_size37... [more]
maker-scaffold94_size379870-snap-gene-2.292.415e-4335.75protein:Tk09638 transcript:maker-scaffold94_size37... [more]
maker-scaffold383_size189472-snap-gene-0.401.642e-935.80protein:Tk11353 transcript:maker-scaffold383_size1... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s175supercontigLSalAtl2s175:564159..564836 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionaugustus_masked-LSalAtl2s175-processed-gene-5.3
Biotypeprotein_coding
EvidenceIEA
NoteGamma-crystallin A [Lepeophtheirus salmonis]
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000003145 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000003145EMLSAT00000003145-698992Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s175:564159..564836+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000003145-685911 ID=EMLSAG00000003145-685911|Name=EMLSAG00000003145|organism=Lepeophtheirus salmonis|type=gene|length=678bp|location=Sequence derived from alignment at LSalAtl2s175:564159..564836+ (Lepeophtheirus salmonis)
ATGAAAGTACTTTTATCGTTAACTATTCTGGTTGGAATTTCCCTTGGAGC CCAGGACATCAGACTTTACTCCGAAACAAATCTACAAGGGCCTTCAAAAG TAGTTTCTAGGTATGAAGAGGACTTACAACTCATCGGATTTAATAATAAA GCCAAATCTGTACTTGTTAACGGGATATGGCTTTTGTATGAAGAAGTTAG TTTTAACAGAGGGAATTACAACAAAATAGTAACCTATATATGGGGCCGAA ATTTTCAGCTTAATACATTGGGAGGAATCAACGGAAAAGTCTCATCTATT AGGTATTCGGGTGTAGATGACCATAGTGCAAATACACTCAACTTTTACGA AGGCCCCGGATTTATGGGAATCGAGCAAAATGTTTATAAAGATTCTCCTA AGCTTAACTATGACAACTTTGGTAAATCCATCATCATTACTGGATGCAAG CCATGGACTCTCTATGAGACGGAAAACTTTGGAGGAAGCAGTATTTGTGT GTATCCAAATTCTATGTCCTCCCCATGCAAACCAGGCTTCTTTGTAGAAC CTTCAGATTTTGGACATTTTGCCGATCAAGTCTCAAGTGTTAGACTTGGA TGCTTCTCAAAGAGTTCCTTTGTTGCTAAACCATTTATTGAAGGAGAATC AAAATCCATTAATCTCATTGAGAATTAA
back to top
Add to Basket