EMLSAG00000003158, EMLSAG00000003158-685924 (gene) Lepeophtheirus salmonis

Overview


Name	EMLSAG00000003158
Unique Name	EMLSAG00000003158-685924
Type	gene
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Homology

[Close]

BLAST of EMLSAG00000003158 vs. GO
Match: - (symbol:exosc2 "exosome component 2" species:7955 "Danio rerio" [GO:0000178 "exosome (RNase complex)" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR026699 ZFIN:ZDB-GENE-050417-27 GO:GO:0003723 GO:GO:0000178 InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR022967 SMART:SM00316 InterPro:IPR025721 Pfam:PF14382 CTD:23404 GeneTree:ENSGT00440000033656 KO:K03679 OMA:PLKTRYN OrthoDB:EOG7JX34R TreeFam:TF105623 PANTHER:PTHR21321 EMBL:CU929062 RefSeq:NP_001017572.2 UniGene:Dr.76338 DNASU:550234 Ensembl:ENSDART00000149195 GeneID:550234 KEGG:dre:550234 NextBio:20879497 PRO:PR:F8W3K6 ArrayExpress:F8W3K6 Bgee:F8W3K6 Uniprot:F8W3K6)

HSP 1 Score: 300.442 bits (768), Expect = 4.618e-99
Identity = 152/283 (53.71%), Postives = 201/283 (71.02%), Query Frame = 0

Query:   22 FVTPGDIITRESGYMRGHGTYASDEGNEEKECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKYGKLEGGTVVKVSPSLIKRQKTHFHTFPGGVSMILGLNGFIWLSIKSMISISEEDDDYEKQEYENGSNSFDDSDLGLIESNPRLAIARLRNVVLALAANGVQLWDTSIIYGFKASENYDPKSLLKRDVMYDVARKTQLRL 304
             V PGD+IT ++G+MRGHGTY  ++       L ASV G V+RVNKLI V PL++ Y GE+GDV+VGRI EVQQKRWKVE NSRLD++L LS+VNLPGGELRRRS++DEL+MR YL+EGDLISAEVQ+++ DG++S+HTRSLKYGKL  G +V VSPSL+KRQKTHFH  P G S+ILG NG++WLS    +   +    Y   E  + S+              R  ++RLRN +LALA   V L+DTS++Y ++AS  +  K +LK ++M ++  +T+ RL
Sbjct:   28 LVVPGDVITSDTGFMRGHGTYMDEDR------LTASVAGQVERVNKLICVKPLKTRYNGEVGDVVVGRITEVQQKRWKVETNSRLDSVLLLSAVNLPGGELRRRSTQDELAMRDYLQEGDLISAEVQSIFSDGALSLHTRSLKYGKLGQGVLVYVSPSLVKRQKTHFHNLPCGASLILGNNGYVWLSPTPALQEEQAGGFYTSMEPVSLSD--------------REVVSRLRNCLLALANQKVLLFDTSVLYCYEASLQHQIKDILKPEIMEEIVLETRQRL 290

[Close]

BLAST of EMLSAG00000003158 vs. GO
Match: - (symbol:EXOSC2 "Uncharacterized protein" species:9031 "Gallus gallus" [GO:0000178 "exosome (RNase complex)" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0030307 "positive regulation of cell growth" evidence=IEA] InterPro:IPR026699 GO:GO:0005634 GO:GO:0005737 GO:GO:0030307 GO:GO:0003723 GO:GO:0000178 InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR022967 SMART:SM00316 InterPro:IPR025721 Pfam:PF14382 GeneTree:ENSGT00440000033656 OrthoDB:EOG7JX34R TreeFam:TF105623 PANTHER:PTHR21321 EMBL:AADN03007246 Ensembl:ENSGALT00000039547 NextBio:20820527 PRO:PR:F1NGC4 Uniprot:F1NGC4)

HSP 1 Score: 299.286 bits (765), Expect = 1.225e-98
Identity = 158/283 (55.83%), Postives = 202/283 (71.38%), Query Frame = 0

Query:   22 FVTPGDIITRESGYMRGHGTYASDEGNEEKECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKYGKLEGGTVVKVSPSLIKRQKTHFHTFPGGVSMILGLNGFIWLSIKSMISISEEDDDYEKQEYENGSNSFDDSDLGLIESNPRLAIARLRNVVLALAANGVQLWDTSIIYGFKASENYDPKSLLKRDVMYDVARKTQLRL 304
             V PGD IT ++GYMRGHGTY     +EEK  L+ASV G V+RVNKL+ V PL++ Y GE+GD++VGRI EVQQKRWKVE NSRLD++L LSS+NLPGGELRRRS+EDEL+MR YL+EGDLISAEVQ+++ DG++S+HTRSLKYGKL  G +V+VSPSL+KRQKTHFH  P G S+ILG NGFIW      I  + E  D E   +         SD        R  I+RLRN V+AL    + L+DTSI+Y ++AS  +  K +LK +VM ++  +T+ +L
Sbjct:   27 LVVPGDTITTDTGYMRGHGTYV----DEEK--LVASVAGAVERVNKLVCVTPLKTRYNGEVGDIVVGRITEVQQKRWKVE-NSRLDSVLLLSSMNLPGGELRRRSAEDELAMRDYLQEGDLISAEVQSVFSDGAVSLHTRSLKYGKLGQGVLVQVSPSLVKRQKTHFHDLPCGASVILGNNGFIW------IYPTPEQKDEEAGGFTTNLEPVPLSD--------REVISRLRNCVVALVTQKLMLFDTSILYCYEASLPHQIKDILKPEVMEEIVLETRQKL 288

[Close]

BLAST of EMLSAG00000003158 vs. GO
Match: - (symbol:EXOSC2 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0000178 "exosome (RNase complex)" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR026699 GO:GO:0003723 GO:GO:0000178 InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR022967 SMART:SM00316 InterPro:IPR025721 Pfam:PF14382 GeneTree:ENSGT00440000033656 KO:K03679 OMA:PLKTRYN OrthoDB:EOG7JX34R PANTHER:PTHR21321 EMBL:AAEX03006837 EMBL:AAEX03006838 EMBL:AAEX03006835 EMBL:AAEX03006836 EMBL:AAEX03006839 RefSeq:XP_005625290.1 Ensembl:ENSCAFT00000046120 GeneID:608606 Uniprot:J9NXW2)

HSP 1 Score: 297.745 bits (761), Expect = 4.451e-98
Identity = 154/288 (53.47%), Postives = 199/288 (69.10%), Query Frame = 0

Query:   17 DEATTFVTPGDIITRESGYMRGHGTYASDEGNEEKECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKYGKLEGGTVVKVSPSLIKRQKTHFHTFPGGVSMILGLNGFIWLSIKSMISISEEDDDYEKQEYENGSNSFDDSDLGLIESNPRLAIARLRNVVLALAANGVQLWDTSIIYGFKASENYDPKSLLKRDVMYDVARKTQLRL 304
            D     V PGD IT ++G+MRGHGTY  +E       LIASV G V+RVNKLI V  L++ Y GE+GD++VGRI EVQQKRWKVE NSRLD++L LSS+NLPGGELRRRS+EDEL+MR +L+EGDLISAEVQ ++ DG++S+HTRSLKYGKL  G +V+VSPSL+KRQKTHFH  P G S+ILG NGFIW+              Y   E++        + L  I    R  I+RLRN +++L    + L+DTSI+Y ++AS  +  K LLK ++M +V  +T+ RL
Sbjct:   21 DTKKHLVVPGDTITTDTGFMRGHGTYMGEEK------LIASVAGSVERVNKLICVKALKTRYNGEVGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGELRRRSAEDELAMRGFLQEGDLISAEVQAVFSDGAVSLHTRSLKYGKLGQGVLVQVSPSLVKRQKTHFHDLPCGASVILGNNGFIWI--------------YPTPEHKEEDTGGFTAHLEPISLADREVISRLRNCIVSLVTQRMMLYDTSILYCYEASLPHQIKDLLKPEIMEEVVMETRQRL 288

[Close]

BLAST of EMLSAG00000003158 vs. GO
Match: - (symbol:EXOSC2 "Exosome complex component RRP4" species:9913 "Bos taurus" [GO:0000178 "exosome (RNase complex)" evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA] [GO:0030307 "positive regulation of cell growth" evidence=IEA] InterPro:IPR026699 GO:GO:0005737 GO:GO:0030307 GO:GO:0005730 eggNOG:COG0515 GO:GO:0003723 HOGENOM:HOG000231988 GO:GO:0000178 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0006364 InterPro:IPR022967 SMART:SM00316 InterPro:IPR025721 Pfam:PF14382 EMBL:BC112683 RefSeq:NP_001040026.1 UniGene:Bt.30629 ProteinModelPortal:Q2KID0 SMR:Q2KID0 STRING:9913.ENSBTAP00000023920 PRIDE:Q2KID0 Ensembl:ENSBTAT00000063775 GeneID:615712 KEGG:bta:615712 CTD:23404 GeneTree:ENSGT00440000033656 HOVERGEN:HBG051517 InParanoid:Q2KID0 KO:K03679 OMA:PLKTRYN OrthoDB:EOG7JX34R TreeFam:TF105623 NextBio:20899754 PANTHER:PTHR21321 Uniprot:Q2KID0)

HSP 1 Score: 297.36 bits (760), Expect = 7.992e-98
Identity = 151/283 (53.36%), Postives = 200/283 (70.67%), Query Frame = 0

Query:   22 FVTPGDIITRESGYMRGHGTYASDEGNEEKECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKYGKLEGGTVVKVSPSLIKRQKTHFHTFPGGVSMILGLNGFIWLSIKSMISISEEDDDYEKQEYENGSNSFDDSDLGLIESNPRLAIARLRNVVLALAANGVQLWDTSIIYGFKASENYDPKSLLKRDVMYDVARKTQLRL 304
             V PGD IT ++G+MRGHGTY  +E       LIASV G V+RVNKLI V  L++ Y GE+GD++VGRI EVQQKRWKVE NSRLD++L LSS+NLPGGELRRRS+EDEL+MR +L+EGDLISAEVQ ++ DG++S+HTRSLKYGKL  G +V+VSPSL+KRQKTHFH  P G S+ILG NGFIW+              Y   E++        ++L  +    R  I+RLRN +++LA   + L+DTSI+Y ++AS  +  K +LK ++M ++  +T+ RL
Sbjct:   26 LVVPGDTITTDTGFMRGHGTYMGEEK------LIASVAGSVERVNKLICVKALKTRYNGEVGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGELRRRSAEDELAMRGFLQEGDLISAEVQAVFSDGAVSLHTRSLKYGKLGQGVLVQVSPSLVKRQKTHFHDLPCGASVILGNNGFIWV--------------YPTPEHKEDDAGGFIANLEPVSLTDREVISRLRNCIVSLATQRMMLYDTSILYCYEASLPHQIKDILKPEIMEEIVMETRQRL 288

[Close]

BLAST of EMLSAG00000003158 vs. GO
Match: - (symbol:Exosc2 "exosome component 2" species:10090 "Mus musculus" [GO:0000178 "exosome (RNase complex)" evidence=ISO] [GO:0003674 "molecular_function" evidence=ND] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006364 "rRNA processing" evidence=IEA] [GO:0030307 "positive regulation of cell growth" evidence=ISO] InterPro:IPR026699 MGI:MGI:2385133 GO:GO:0005737 GO:GO:0030307 GO:GO:0005730 GO:GO:0003723 GO:GO:0000178 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0006364 InterPro:IPR022967 SMART:SM00316 InterPro:IPR025721 Pfam:PF14382 CTD:23404 GeneTree:ENSGT00440000033656 HOVERGEN:HBG051517 KO:K03679 OMA:PLKTRYN OrthoDB:EOG7JX34R TreeFam:TF105623 PANTHER:PTHR21321 eggNOG:COG1097 HOGENOM:HOG000193685 EMBL:BC021485 EMBL:BC021807 RefSeq:NP_659135.1 UniGene:Mm.150972 ProteinModelPortal:Q8VBV3 SMR:Q8VBV3 PhosphoSite:Q8VBV3 PaxDb:Q8VBV3 PRIDE:Q8VBV3 DNASU:227715 Ensembl:ENSMUST00000038474 GeneID:227715 KEGG:mmu:227715 UCSC:uc008jdy.1 InParanoid:Q8VBV3 NextBio:378776 PRO:PR:Q8VBV3 ArrayExpress:Q8VBV3 Bgee:Q8VBV3 CleanEx:MM_EXOSC2 Genevestigator:Q8VBV3 Uniprot:Q8VBV3)

HSP 1 Score: 296.204 bits (757), Expect = 2.337e-97
Identity = 153/288 (53.12%), Postives = 201/288 (69.79%), Query Frame = 0

Query:   17 DEATTFVTPGDIITRESGYMRGHGTYASDEGNEEKECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKYGKLEGGTVVKVSPSLIKRQKTHFHTFPGGVSMILGLNGFIWLSIKSMISISEEDDDYEKQEYENGSNSFDDSDLGLIESNPRLAIARLRNVVLALAANGVQLWDTSIIYGFKASENYDPKSLLKRDVMYDVARKTQLRL 304
            D     V PGD IT ++G+MRGHGTY  +E       LIASV G V+RVNKLI V  L++ Y GE+GD++VGRI EVQQKRWKVE NSRLD++L LSS+NLPGGELRRRS+EDEL+MR +L+EGDLISAEVQ ++ DG++S+HTRSLKYGKL  G +V+VSPSL+KRQKTHFH  P G S+ILG NGFIW+              Y   E+++       ++L  +  + R  I+RLRN V+ L    + L+DTSI+Y ++AS  +  K +LK +VM ++  +T+ RL
Sbjct:   21 DSKKHLVVPGDTITTDTGFMRGHGTYMGEEK------LIASVAGSVERVNKLICVKALKTRYNGEVGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGELRRRSAEDELAMRGFLQEGDLISAEVQAVFSDGAVSLHTRSLKYGKLGQGVLVQVSPSLVKRQKTHFHDLPCGASVILGNNGFIWI--------------YPTPEHKDEDAGGFIANLEPVALSDREVISRLRNCVVLLVTQRMMLFDTSILYCYEASLAHQIKDILKPEVMEEIMLETRQRL 288

[Close]

BLAST of EMLSAG00000003158 vs. GO
Match: - (symbol:Exosc2 "exosome component 2" species:10116 "Rattus norvegicus" [GO:0000178 "exosome (RNase complex)" evidence=IEA;ISO] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0030307 "positive regulation of cell growth" evidence=IEA;ISO] [GO:0004532 "exoribonuclease activity" evidence=ISO] InterPro:IPR026699 RGD:1306573 GO:GO:0005634 GO:GO:0005737 GO:GO:0030307 GO:GO:0003723 GO:GO:0000178 InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR022967 SMART:SM00316 InterPro:IPR025721 Pfam:PF14382 CTD:23404 GeneTree:ENSGT00440000033656 KO:K03679 OMA:PLKTRYN OrthoDB:EOG7JX34R TreeFam:TF105623 PANTHER:PTHR21321 EMBL:CH474001 EMBL:AABR06022148 RefSeq:NP_001102422.1 UniGene:Rn.229542 Ensembl:ENSRNOT00000012312 GeneID:366017 KEGG:rno:366017 NextBio:688530 PRO:PR:D3ZBP3 Uniprot:D3ZBP3)

HSP 1 Score: 295.049 bits (754), Expect = 5.501e-97
Identity = 151/288 (52.43%), Postives = 201/288 (69.79%), Query Frame = 0

Query:   17 DEATTFVTPGDIITRESGYMRGHGTYASDEGNEEKECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKYGKLEGGTVVKVSPSLIKRQKTHFHTFPGGVSMILGLNGFIWLSIKSMISISEEDDDYEKQEYENGSNSFDDSDLGLIESNPRLAIARLRNVVLALAANGVQLWDTSIIYGFKASENYDPKSLLKRDVMYDVARKTQLRL 304
            D     V PGD IT ++G+MRGHGTY  +E       LIASV G V+RVNKLI V  L++ Y GE+GD++VGRI EVQQKRWKVE NSRLD++L LSS+NLPGGELRRRS+EDEL+MR +L+EGDLISAEVQ ++ DG++S+HTRSLKYGKL  G +V+VSP+L+KRQKTHFH  P G S+ILG NGFIW+              Y   E+++       ++L  +  + R  I+RLRN ++ L    + L+DTSI+Y ++AS  +  K +LK +VM ++  +T+ RL
Sbjct:   21 DSKKHLVVPGDTITTDTGFMRGHGTYMGEEK------LIASVAGSVERVNKLICVKALKTRYNGEVGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGELRRRSAEDELAMRGFLQEGDLISAEVQAVFSDGAVSLHTRSLKYGKLGQGALVQVSPALVKRQKTHFHDLPCGASVILGNNGFIWI--------------YPTPEHKDEEAGGFIANLEPVSLSDREVISRLRNCIVLLVTQRMMLYDTSILYCYEASLAHQIKDILKPEVMEEIMLETRQRL 288

[Close]

BLAST of EMLSAG00000003158 vs. GO
Match: - (symbol:EXOSC2 "Exosome complex component RRP4" species:9606 "Homo sapiens" [GO:0000175 "3'-5'-exoribonuclease activity" evidence=TAS] [GO:0000178 "exosome (RNase complex)" evidence=IDA] [GO:0000288 "nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=TAS] [GO:0006364 "rRNA processing" evidence=IEA] [GO:0008312 "7S RNA binding" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0030307 "positive regulation of cell growth" evidence=IMP] [GO:0043928 "exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay" evidence=TAS] [GO:0090503 "RNA phosphodiester bond hydrolysis, exonucleolytic" evidence=TAS] [GO:0004532 "exoribonuclease activity" evidence=IDA] Reactome:REACT_71 Reactome:REACT_21257 InterPro:IPR026699 EMBL:BC000747 GO:GO:0005829 GO:GO:0005634 GO:GO:0030307 GO:GO:0005730 EMBL:CH471090 EMBL:U07561 EMBL:AL359092 GO:GO:0000178 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0006364 GO:GO:0000175 GO:GO:0043928 InterPro:IPR022967 SMART:SM00316 PDB:2NN6 PDBsum:2NN6 InterPro:IPR025721 Pfam:PF14382 CTD:23404 HOVERGEN:HBG051517 KO:K03679 OMA:PLKTRYN OrthoDB:EOG7JX34R TreeFam:TF105623 PANTHER:PTHR21321 EMBL:AK001916 EMBL:AK022460 RefSeq:NP_055100.2 UniGene:Hs.654643 ProteinModelPortal:Q13868 SMR:Q13868 BioGrid:116977 IntAct:Q13868 MINT:MINT-2633872 STRING:9606.ENSP00000361433 PhosphoSite:Q13868 DMDM:13878748 PaxDb:Q13868 PRIDE:Q13868 DNASU:23404 Ensembl:ENST00000372358 GeneID:23404 KEGG:hsa:23404 UCSC:uc004bzu.2 GeneCards:GC09P133569 H-InvDB:HIX0008473 HGNC:HGNC:17097 HPA:HPA021790 MIM:602238 neXtProt:NX_Q13868 PharmGKB:PA134876020 eggNOG:COG1097 HOGENOM:HOG000193685 InParanoid:Q13868 PhylomeDB:Q13868 ChiTaRS:EXOSC2 EvolutionaryTrace:Q13868 GeneWiki:Exosome_component_2 GenomeRNAi:23404 NextBio:45573 PRO:PR:Q13868 ArrayExpress:Q13868 Bgee:Q13868 CleanEx:HS_EXOSC2 Genevestigator:Q13868 GO:GO:0008312 Uniprot:Q13868)

HSP 1 Score: 295.049 bits (754), Expect = 6.542e-97
Identity = 151/288 (52.43%), Postives = 200/288 (69.44%), Query Frame = 0

Query:   17 DEATTFVTPGDIITRESGYMRGHGTYASDEGNEEKECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKYGKLEGGTVVKVSPSLIKRQKTHFHTFPGGVSMILGLNGFIWLSIKSMISISEEDDDYEKQEYENGSNSFDDSDLGLIESNPRLAIARLRNVVLALAANGVQLWDTSIIYGFKASENYDPKSLLKRDVMYDVARKTQLRL 304
            D     V PGD IT ++G+MRGHGTY  +E       LIASV G V+RVNKLI V  L++ Y GE+GD++VGRI EVQQKRWKVE NSRLD++L LSS+NLPGGELRRRS+EDEL+MR +L+EGDLISAEVQ ++ DG++S+HTRSLKYGKL  G +V+VSPSL+KRQKTHFH  P G S+ILG NGFIW+              Y   E++        ++L  +    R  I+RLRN +++L    + L+DTSI+Y ++AS  +  K +LK ++M ++  +T+ RL
Sbjct:   21 DTKKHLVVPGDTITTDTGFMRGHGTYMGEEK------LIASVAGSVERVNKLICVKALKTRYIGEVGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGELRRRSAEDELAMRGFLQEGDLISAEVQAVFSDGAVSLHTRSLKYGKLGQGVLVQVSPSLVKRQKTHFHDLPCGASVILGNNGFIWI--------------YPTPEHKEEEAGGFIANLEPVSLADREVISRLRNCIISLVTQRMMLYDTSILYCYEASLPHQIKDILKPEIMEEIVMETRQRL 288

[Close]

BLAST of EMLSAG00000003158 vs. GO
Match: - (symbol:EXOSC2 "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0000178 "exosome (RNase complex)" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0030307 "positive regulation of cell growth" evidence=IEA] InterPro:IPR026699 GO:GO:0005634 GO:GO:0005737 GO:GO:0030307 GO:GO:0003723 GO:GO:0000178 InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR022967 SMART:SM00316 InterPro:IPR025721 Pfam:PF14382 GeneTree:ENSGT00440000033656 OMA:PLKTRYN OrthoDB:EOG7JX34R TreeFam:TF105623 PANTHER:PTHR21321 EMBL:CU914779 Ensembl:ENSSSCT00000006273 Uniprot:F1S0X6)

HSP 1 Score: 290.812 bits (743), Expect = 3.295e-95
Identity = 152/289 (52.60%), Postives = 199/289 (68.86%), Query Frame = 0

Query:   22 FVTPGDIITRESGYMR------GHGTYASDEGNEEKECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKYGKLEGGTVVKVSPSLIKRQKTHFHTFPGGVSMILGLNGFIWLSIKSMISISEEDDDYEKQEYENGSNSFDDSDLGLIESNPRLAIARLRNVVLALAANGVQLWDTSIIYGFKASENYDPKSLLKRDVMYDVARKTQLRL 304
             V PGD IT ++G+MR      GHGTY  +E       LIASV G V+RVNKLI V  L++ Y GE+GD++VGRI EVQQKRWKVE NSRLD++L LSS+NLPGGELRRRS+EDEL+MR +L+EGDLISAEVQ ++ DG++S+HTRSLKYGKL  G +V+VSPSL+KRQKTHFH  P G S+ILG NGFIW+              Y   E++        ++L  +    R  I+RLRN +++L    V L+DTSI+Y ++AS  +  K +LK +VM ++  +T+ RL
Sbjct:   26 LVVPGDTITTDTGFMRSSCCHRGHGTYMGEEK------LIASVAGSVERVNKLICVKALKTRYNGEVGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGELRRRSAEDELAMRGFLQEGDLISAEVQAVFSDGAVSLHTRSLKYGKLGQGVLVQVSPSLVKRQKTHFHDLPCGASVILGNNGFIWI--------------YPTPEHKEEEAGGFIANLEPVSLADREVISRLRNCIVSLVTQRVMLYDTSILYCYEASLPHQIKDILKPEVMEEIVMETRQRL 294

[Close]

BLAST of EMLSAG00000003158 vs. GO
Match: - (symbol:Rrp4 "Rrp4" species:7227 "Drosophila melanogaster" [GO:0000176 "nuclear exosome (RNase complex)" evidence=ISS;IDA] [GO:0006397 "mRNA processing" evidence=ISS] [GO:0000175 "3'-5'-exoribonuclease activity" evidence=ISS] [GO:0000177 "cytoplasmic exosome (RNase complex)" evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005652 "nuclear lamina" evidence=IDA] [GO:0010468 "regulation of gene expression" evidence=IMP] InterPro:IPR026699 GO:GO:0005737 GO:GO:0003723 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0010468 GO:GO:0005652 GO:GO:0000176 InterPro:IPR022967 SMART:SM00316 InterPro:IPR025721 Pfam:PF14382 OrthoDB:EOG7JX34R PANTHER:PTHR21321 eggNOG:COG1097 EMBL:AY118465 ProteinModelPortal:Q8MSZ7 SMR:Q8MSZ7 STRING:7227.FBpp0072020 PaxDb:Q8MSZ7 PRIDE:Q8MSZ7 FlyBase:FBgn0034879 InParanoid:Q8MSZ7 Bgee:Q8MSZ7 Uniprot:Q8MSZ7)

HSP 1 Score: 286.96 bits (733), Expect = 1.054e-93
Identity = 150/297 (50.51%), Postives = 201/297 (67.68%), Query Frame = 0

Query:    8 EWEKPPEDVDEATTFVTPGDIITRESGYMRGHGTYASDEGNEEKECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKYGKLEGGTVVKVSPSLIKRQKTHFHTFPGGVSMILGLNGFIWLSIKSMISISEEDDDYEKQEYENGSNSFDDSDLGLIESNPRLAIARLRNVVLALAANGVQLWDTSIIYGFKASENYDPKSLLKRDVMYDVARKTQLRL 304
            +W       +E     TPG+++  E+G+MRGHGT+  DE       + +SV GV+++VNKLI V PL+S Y GEIGDV+V R+ EVQQKRW+V+ NSRLD+IL LSSVNLPGGELRRRS+EDE  MR YL EGDLISAEVQ ++++GS+S++TRSLKYGKL  G +VKV P+L+KR+K HFH  P G S+ILG NG+IW+S              + QE E G   F  +    +    R  IARLRN +LALA   + ++DTSI Y ++ S  Y+   LL+++ +YD+ ++TQ RL
Sbjct:   15 DWRDLAAQTEEQPRVYTPGEVLMPEAGFMRGHGTFVEDEN------IKSSVAGVIQKVNKLISVRPLKSRYVGEIGDVVVARVSEVQQKRWRVDTNSRLDSILLLSSVNLPGGELRRRSAEDEQMMRRYLDEGDLISAEVQNIFEEGSLSLYTRSLKYGKLSQGILVKVFPALVKRRKMHFHNLPCGASVILGNNGYIWIS------------PTKGQEEEGGEGGFAQNLNEHVPRADREVIARLRNSILALAKCKLMIYDTSIQYAYEESLRYEAHELLQQNAIYDIGQQTQGRL 293

[Close]

BLAST of EMLSAG00000003158 vs. GO
Match: - (symbol:EXOSC2 "Exosome complex component RRP4" species:9606 "Homo sapiens" [GO:0000178 "exosome (RNase complex)" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR026699 GO:GO:0003723 EMBL:AL359092 GO:GO:0000178 InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR022967 SMART:SM00316 InterPro:IPR025721 Pfam:PF14382 HOVERGEN:HBG051517 PANTHER:PTHR21321 HGNC:HGNC:17097 HOGENOM:HOG000193685 ChiTaRS:EXOSC2 ProteinModelPortal:A3KFL2 SMR:A3KFL2 PRIDE:A3KFL2 Ensembl:ENST00000372352 NextBio:35461483 ArrayExpress:A3KFL2 Uniprot:A3KFL2)

HSP 1 Score: 283.108 bits (723), Expect = 2.107e-92
Identity = 148/288 (51.39%), Postives = 195/288 (67.71%), Query Frame = 0

Query:   17 DEATTFVTPGDIITRESGYMRGHGTYASDEGNEEKECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKYGKLEGGTVVKVSPSLIKRQKTHFHTFPGGVSMILGLNGFIWLSIKSMISISEEDDDYEKQEYENGSNSFDDSDLGLIESNPRLAIARLRNVVLALAANGVQLWDTSIIYGFKASENYDPKSLLKRDVMYDVARKTQLRL 304
            D     V PGD IT ++G+MRGHGTY  +E       LIASV G V+RVNKLI V  L++ Y GE+GD++VGRI EVQQKRWKVE NSRLD++L LSS+NLPGGELRRRS+EDEL+MR +L+EGDLISAEVQ ++ DG++S+HTRSLKYG        KVSPSL+KRQKTHFH  P G S+ILG NGFIW+              Y   E++        ++L  +    R  I+RLRN +++L    + L+DTSI+Y ++AS  +  K +LK ++M ++  +T+ RL
Sbjct:   21 DTKKHLVVPGDTITTDTGFMRGHGTYMGEEK------LIASVAGSVERVNKLICVKALKTRYIGEVGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGELRRRSAEDELAMRGFLQEGDLISAEVQAVFSDGAVSLHTRSLKYG--------KVSPSLVKRQKTHFHDLPCGASVILGNNGFIWI--------------YPTPEHKEEEAGGFIANLEPVSLADREVISRLRNCIISLVTQRMMLYDTSILYCYEASLPHQIKDILKPEIMEEIVMETRQRL 280

[Close]

BLAST of EMLSAG00000003158 vs. C. finmarchicus
Match: gi|592807298|gb|GAXK01147270.1| (TSA: Calanus finmarchicus comp42693_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 260.381 bits (664), Expect = 2.524e-84
Identity = 137/208 (65.87%), Postives = 167/208 (80.29%), Query Frame = 0

Query:    1 MDISLANEWEKPPEDVD-EATTFVTPGDIITRESGYMRGHGTYASDEGNEEKECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKYGKLEGGTVVKVSPSLIKRQKTHFHTFPGGVSMILGLNGFIWL 207
            +DI+LA E      D++ E    V PGD+ITR++G+MRGHGTY +D+       L ASV GVV+RVNKLI V PL++ Y GEIGDV+VGR+VEVQQKRWKV++ SRLD++L LSSVNLPGGELRRRS+EDELSMR YL EGDLISAEVQ +Y DGS+S+HTRSLKYGKL  G +V+VSPSL+KR+KTHFH  P G S+ILG NGF+W+
Sbjct:  115 VDIALALEKRVKRVDIESEPEHLVAPGDVITRDTGFMRGHGTYMADD------VLFASVAGVVERVNKLISVTPLKTRYNGEIGDVVVGRVVEVQQKRWKVDIKSRLDSVLLLSSVNLPGGELRRRSAEDELSMRRYLSEGDLISAEVQNIYNDGSLSLHTRSLKYGKLGQGVMVQVSPSLVKRRKTHFHQLPVGASVILGNNGFVWI 720

[Close]

BLAST of EMLSAG00000003158 vs. C. finmarchicus
Match: gi|592815323|gb|GAXK01139245.1| (TSA: Calanus finmarchicus comp194527_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 44.2838 bits (103), Expect = 5.397e-5
Identity = 39/72 (54.17%), Postives = 48/72 (66.67%), Query Frame = 0

Query:  237 SDLGLIESNPXXXXXXXXXXXXXXXXXXXXXWDTSIIYGFKASENYDPKSLLKRDVMYDVARKTQLRLEXDN 308
            +DLG+++   R  +ARLRNVVLALA NG  LWDTSI+YG++AS  Y    LL  D M DVA  T+ RL  D 
Sbjct:   58 ADLGVVQHQDREVMARLRNVVLALANNGTMLWDTSIMYGYEASSKYSVTELLSPDCMRDVAHLTKQRLMLDQ 273

[Close]

BLAST of EMLSAG00000003158 vs. C. finmarchicus
Match: gi|592943902|gb|GAXK01014651.1| (TSA: Calanus finmarchicus comp8006_c3_seq10 transcribed RNA sequence)

HSP 1 Score: 30.4166 bits (67), Expect = 9.440e+0
Identity = 12/40 (30.00%), Postives = 19/40 (47.50%), Query Frame = 0

Query:  171 GTVVKVSPSLIKRQKTHFHTFPGGVSMILGLNGFIWLSIK 210
            G VVK+SP  +     H H  P  + ++L     +WL + 
Sbjct:  133 GAVVKLSPEPVPHAAHHLHVLPDVLGLVLAHPDHVWLVVA 252

[Close]

BLAST of EMLSAG00000003158 vs. C. finmarchicus
Match: gi|592943905|gb|GAXK01014648.1| (TSA: Calanus finmarchicus comp8006_c3_seq7 transcribed RNA sequence)

HSP 1 Score: 30.4166 bits (67), Expect = 9.651e+0
Identity = 12/40 (30.00%), Postives = 19/40 (47.50%), Query Frame = 0

Query:  171 GTVVKVSPSLIKRQKTHFHTFPGGVSMILGLNGFIWLSIK 210
            G VVK+SP  +     H H  P  + ++L     +WL + 
Sbjct:  282 GAVVKLSPEPVPHAAHHLHVLPDVLGLVLAHPDHVWLVVA 401

[Close]

BLAST of EMLSAG00000003158 vs. C. finmarchicus
Match: gi|592943910|gb|GAXK01014643.1| (TSA: Calanus finmarchicus comp8006_c3_seq2 transcribed RNA sequence)

HSP 1 Score: 30.4166 bits (67), Expect = 9.889e+0
Identity = 12/40 (30.00%), Postives = 19/40 (47.50%), Query Frame = 0

Query:  171 GTVVKVSPSLIKRQKTHFHTFPGGVSMILGLNGFIWLSIK 210
            G VVK+SP  +     H H  P  + ++L     +WL + 
Sbjct:  494 GAVVKLSPEPVPHAAHHLHVLPDVLGLVLAHPDHVWLVVA 613

[Close]

BLAST of EMLSAG00000003158 vs. C. finmarchicus
Match: gi|592943911|gb|GAXK01014642.1| (TSA: Calanus finmarchicus comp8006_c3_seq1 transcribed RNA sequence)

HSP 1 Score: 30.4166 bits (67), Expect = 9.979e+0
Identity = 12/40 (30.00%), Postives = 19/40 (47.50%), Query Frame = 0

Query:  171 GTVVKVSPSLIKRQKTHFHTFPGGVSMILGLNGFIWLSIK 210
            G VVK+SP  +     H H  P  + ++L     +WL + 
Sbjct:  592 GAVVKLSPEPVPHAAHHLHVLPDVLGLVLAHPDHVWLVVA 711

[Close]

BLAST of EMLSAG00000003158 vs. L. salmonis peptides
Match: EMLSAP00000003158 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1763:6194:7583:1 gene:EMLSAG00000003158 transcript:EMLSAT00000003158 description:"maker-LSalAtl2s1763-augustus-gene-0.5")

HSP 1 Score: 628.632 bits (1620), Expect = 0.000e+0
Identity = 309/309 (100.00%), Postives = 309/309 (100.00%), Query Frame = 0

Query:    1 MDISLANEWEKPPEDVDEATTFVTPGDIITRESGYMRGHGTYASDEGNEEKECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKYGKLEGGTVVKVSPSLIKRQKTHFHTFPGGVSMILGLNGFIWLSIKSMISISEEDDDYEKQEYENGSNSFDDSDLGLIESNPRLAIARLRNVVLALAANGVQLWDTSIIYGFKASENYDPKSLLKRDVMYDVARKTQLRLEXDNH 309
            MDISLANEWEKPPEDVDEATTFVTPGDIITRESGYMRGHGTYASDEGNEEKECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKYGKLEGGTVVKVSPSLIKRQKTHFHTFPGGVSMILGLNGFIWLSIKSMISISEEDDDYEKQEYENGSNSFDDSDLGLIESNPRLAIARLRNVVLALAANGVQLWDTSIIYGFKASENYDPKSLLKRDVMYDVARKTQLRLEXDNH
Sbjct:    1 MDISLANEWEKPPEDVDEATTFVTPGDIITRESGYMRGHGTYASDEGNEEKECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKYGKLEGGTVVKVSPSLIKRQKTHFHTFPGGVSMILGLNGFIWLSIKSMISISEEDDDYEKQEYENGSNSFDDSDLGLIESNPRLAIARLRNVVLALAANGVQLWDTSIIYGFKASENYDPKSLLKRDVMYDVARKTQLRLEXDNH 309

[Close]

BLAST of EMLSAG00000003158 vs. SwissProt
Match: gi|122143860|sp|Q2KID0.1|EXOS2_BOVIN (RecName: Full=Exosome complex component RRP4; AltName: Full=Exosome component 2; AltName: Full=Ribosomal RNA-processing protein 4)

HSP 1 Score: 297.36 bits (760), Expect = 1.581e-99
Identity = 151/283 (53.36%), Postives = 200/283 (70.67%), Query Frame = 0

Query:   22 FVTPGDIITRESGYMRGHGTYASDEGNEEKECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKYGKLEGGTVVKVSPSLIKRQKTHFHTFPGGVSMILGLNGFIWLSIKSMISISEEDDDYEKQEYENGSNSFDDSDLGLIESNPRLAIARLRNVVLALAANGVQLWDTSIIYGFKASENYDPKSLLKRDVMYDVARKTQLRL 304
             V PGD IT ++G+MRGHGTY  +E       LIASV G V+RVNKLI V  L++ Y GE+GD++VGRI EVQQKRWKVE NSRLD++L LSS+NLPGGELRRRS+EDEL+MR +L+EGDLISAEVQ ++ DG++S+HTRSLKYGKL  G +V+VSPSL+KRQKTHFH  P G S+ILG NGFIW+              Y   E++        ++L  +    R  I+RLRN +++LA   + L+DTSI+Y ++AS  +  K +LK ++M ++  +T+ RL
Sbjct:   26 LVVPGDTITTDTGFMRGHGTYMGEEK------LIASVAGSVERVNKLICVKALKTRYNGEVGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGELRRRSAEDELAMRGFLQEGDLISAEVQAVFSDGAVSLHTRSLKYGKLGQGVLVQVSPSLVKRQKTHFHDLPCGASVILGNNGFIWV--------------YPTPEHKEDDAGGFIANLEPVSLTDREVISRLRNCIVSLATQRMMLYDTSILYCYEASLPHQIKDILKPEIMEEIVMETRQRL 288

[Close]

BLAST of EMLSAG00000003158 vs. SwissProt
Match: gi|62900370|sp|Q8VBV3.1|EXOS2_MOUSE (RecName: Full=Exosome complex component RRP4; AltName: Full=Exosome component 2; AltName: Full=Ribosomal RNA-processing protein 4)

HSP 1 Score: 296.204 bits (757), Expect = 4.652e-99
Identity = 153/288 (53.12%), Postives = 201/288 (69.79%), Query Frame = 0

Query:   17 DEATTFVTPGDIITRESGYMRGHGTYASDEGNEEKECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKYGKLEGGTVVKVSPSLIKRQKTHFHTFPGGVSMILGLNGFIWLSIKSMISISEEDDDYEKQEYENGSNSFDDSDLGLIESNPRLAIARLRNVVLALAANGVQLWDTSIIYGFKASENYDPKSLLKRDVMYDVARKTQLRL 304
            D     V PGD IT ++G+MRGHGTY  +E       LIASV G V+RVNKLI V  L++ Y GE+GD++VGRI EVQQKRWKVE NSRLD++L LSS+NLPGGELRRRS+EDEL+MR +L+EGDLISAEVQ ++ DG++S+HTRSLKYGKL  G +V+VSPSL+KRQKTHFH  P G S+ILG NGFIW+              Y   E+++       ++L  +  + R  I+RLRN V+ L    + L+DTSI+Y ++AS  +  K +LK +VM ++  +T+ RL
Sbjct:   21 DSKKHLVVPGDTITTDTGFMRGHGTYMGEEK------LIASVAGSVERVNKLICVKALKTRYNGEVGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGELRRRSAEDELAMRGFLQEGDLISAEVQAVFSDGAVSLHTRSLKYGKLGQGVLVQVSPSLVKRQKTHFHDLPCGASVILGNNGFIWI--------------YPTPEHKDEDAGGFIANLEPVALSDREVISRLRNCVVLLVTQRMMLFDTSILYCYEASLAHQIKDILKPEVMEEIMLETRQRL 288

[Close]

BLAST of EMLSAG00000003158 vs. SwissProt
Match: gi|13878748|sp|Q13868.2|EXOS2_HUMAN (RecName: Full=Exosome complex component RRP4; AltName: Full=Exosome component 2; AltName: Full=Ribosomal RNA-processing protein 4)

HSP 1 Score: 295.049 bits (754), Expect = 1.310e-98
Identity = 151/288 (52.43%), Postives = 200/288 (69.44%), Query Frame = 0

Query:   17 DEATTFVTPGDIITRESGYMRGHGTYASDEGNEEKECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKYGKLEGGTVVKVSPSLIKRQKTHFHTFPGGVSMILGLNGFIWLSIKSMISISEEDDDYEKQEYENGSNSFDDSDLGLIESNPRLAIARLRNVVLALAANGVQLWDTSIIYGFKASENYDPKSLLKRDVMYDVARKTQLRL 304
            D     V PGD IT ++G+MRGHGTY  +E       LIASV G V+RVNKLI V  L++ Y GE+GD++VGRI EVQQKRWKVE NSRLD++L LSS+NLPGGELRRRS+EDEL+MR +L+EGDLISAEVQ ++ DG++S+HTRSLKYGKL  G +V+VSPSL+KRQKTHFH  P G S+ILG NGFIW+              Y   E++        ++L  +    R  I+RLRN +++L    + L+DTSI+Y ++AS  +  K +LK ++M ++  +T+ RL
Sbjct:   21 DTKKHLVVPGDTITTDTGFMRGHGTYMGEEK------LIASVAGSVERVNKLICVKALKTRYIGEVGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGELRRRSAEDELAMRGFLQEGDLISAEVQAVFSDGAVSLHTRSLKYGKLGQGVLVQVSPSLVKRQKTHFHDLPCGASVILGNNGFIWI--------------YPTPEHKEEEAGGFIANLEPVSLADREVISRLRNCIISLVTQRMMLYDTSILYCYEASLPHQIKDILKPEIMEEIVMETRQRL 288

[Close]

BLAST of EMLSAG00000003158 vs. SwissProt
Match: gi|1175376|sp|Q09704.1|RRP4_SCHPO (RecName: Full=Exosome complex component rrp4; AltName: Full=Ribosomal RNA-processing protein 4)

HSP 1 Score: 225.713 bits (574), Expect = 4.897e-71
Identity = 118/263 (44.87%), Postives = 168/263 (63.88%), Query Frame = 0

Query:   22 FVTPGDIITRESGYMRGHGTYASDEGNEEKECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKYGKLEGGTVVKVSPSLIKRQKTHFHTFPGGVSMILGLNGFIWLS-----IKSMISISEEDDDYEKQEYENGSNSFDDSDLGLIESNPRLAIARLRNVVLALAANGVQLWDTSIIYGFKAS 279
             VTPG ++T +  +MRGHGTY  D G      + ASV G V+RVNKLI V PLRS Y  EIGD+++G+I EVQ KRWKV++ ++ +A+L LSS+NLPGG  RR+   DEL MR++ +EGDL+ AEVQ  + DGS+SIHTRSLKYGKL  G  +KV P+L+ R K+H +   GGV +IL +NG++W+S       S +SI+  +++  +  Y N ++  D           RL I+R+   +  LA+  + L   SI   +++S
Sbjct:   57 LVTPGQLVTDDPQFMRGHGTYFEDGG------IYASVAGSVQRVNKLISVKPLRSKYVPEIGDLIIGKIAEVQPKRWKVDIGAKQNAVLMLSSINLPGGIQRRKLETDELQMRSFFQEGDLLVAEVQQYFSDGSVSIHTRSLKYGKLRNGVFLKVPPALVVRSKSHAYALAGGVDIILSVNGYVWVSKHNENQHSSVSITRLEEEASESIYSNENDEID--------GYTRLNISRVSICIKGLASRSLPLTQASITNFYESS 305

[Close]

BLAST of EMLSAG00000003158 vs. SwissProt
Match: gi|731671|sp|P38792.1|RRP4_YEAST (RecName: Full=Exosome complex component RRP4; AltName: Full=Ribosomal RNA-processing protein 4)

HSP 1 Score: 224.942 bits (572), Expect = 2.956e-70
Identity = 122/300 (40.67%), Postives = 177/300 (59.00%), Query Frame = 0

Query:   20 TTFVTPGDIITRESGYMRGHGTYASDEGNEEKECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKYGKLEGGTVVKVSPSLIKRQKTHFHTFPGGVSMILGLNGFIWLSIKSMISISEE---------------------DDDYEKQEYENGSNSFDDSDLGLIESNPRLAIARLRNVVLALAANGVQLWDTSIIYGFKASENY-DPKSLLKRDVMYDVA 297
            +  VTPG+++T +  +MRGHGTY  D          +SV G V RVN+L+ V+PL+  Y  E GD +VGRI EV  KRWKV++  +  A+L L SVNLPGG LRR+S  DEL MR++L+EGDL++AEVQ+L++DGS S+HTRSLKYGKL  G   +V  SLI R K H H  PG ++++LG+NG+IWL   S + ++ +                     +    + E E+    + D +   I +N R AI R  NV+ ALA   + +    I+  ++AS  Y +   L++++VM  + 
Sbjct:   52 SQIVTPGELVTDDPIWMRGHGTYFLDN------MTYSSVAGTVSRVNRLLSVIPLKGRYAPETGDHVVGRIAEVGNKRWKVDIGGKQHAVLMLGSVNLPGGILRRKSESDELQMRSFLKEGDLLNAEVQSLFQDGSASLHTRSLKYGKLRNGMFCQVPSSLIVRAKNHTHNLPGNITVVLGVNGYIWLRKTSQMDLARDTPSANNSSSIKSTGPTGAVSLNPSITRLEEESSWQIYSDENDPSISNNIRQAICRYANVIKALAFCEIGITQQRIVSAYEASMVYSNVGELIEKNVMESIG 345

[Close]

BLAST of EMLSAG00000003158 vs. SwissProt
Match: gi|75217040|sp|Q9ZVT7.1|RRP4_ARATH (RecName: Full=Exosome complex component RRP4 homolog; AltName: Full=Ribosomal RNA-processing protein 4; Short=AtRRP4; Short=AtRrp4p)

HSP 1 Score: 184.111 bits (466), Expect = 5.587e-55
Identity = 106/278 (38.13%), Postives = 161/278 (57.91%), Query Frame = 0

Query:   18 EATTFVTPGDIITRESGYMRGHGTYASDEGNEEKECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKYGKLEGGTVVKVSPSLIKRQKTHFHTFPG-GVSMILGLNGFIW----LSIKSMISISEEDDDYEKQEYENGSNSFDDSDLGLIESNPRLAIARLRNVVLALAANGVQLWDTSII--YGFKASENYDPKSLL 288
            +A+  VT    +  +  +++GHGT   D        L+A+V GVV+RV+KL+ V  LR+ Y+ E+GD++VGR++EV QKRW+VE+N   D +L LSS+N+P G  RRR+S DEL+MR    E D++ AEV+    DGS+ +  RS KYGKLE G ++KV P L+KR K HFH     G+ +I+G NGFIW    + ++  ++I   DD  +++   + S   + S + L     R  I R+ N +  L+  G  +    I+       S+N D   +L
Sbjct:   35 DASVIVTDSIPVNHDDAFLKGHGTSEVDGE------LLATVCGVVERVDKLVYVRTLRARYKPEVGDIVVGRVIEVAQKRWRVELNFNQDGVLMLSSMNMPDGIQRRRTSVDELNMRNIFVEHDVVCAEVRNFQHDGSLQLQARSQKYGKLEKGQLLKVDPYLVKRSKHHFHYVESLGIDLIIGCNGFIWVGEHVEVRDPMAI---DDQKDEEMISSSSTGKEQSHIPL---ETRQTICRIGNAIRVLSNLGFTVTLEVIMETVNLSNSKNIDIHDML 300

[Close]

BLAST of EMLSAG00000003158 vs. SwissProt
Match: gi|29337011|sp|Q9V120.1|RRP4_PYRAB (RecName: Full=Exosome complex component Rrp4)

HSP 1 Score: 74.7146 bits (182), Expect = 2.890e-14
Identity = 54/198 (27.27%), Postives = 99/198 (50.00%), Query Frame = 0

Query:   22 FVTPGDIITRESGYMRGHGTYASDEGNEEKECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKY--GKLEGGTVVKVSPSLIKRQKTHFHTFPGGVS------MILGLNGFIWLSIKS 211
             V PG ++  +  Y  G GT+       E   + ++V G+V      IRV+PL   Y  E+GD ++G+IV+V+   W V++ +   A L +        +L R        +R +   GD+I A+V+ + +  ++ + T+ + +  G L+GG +VK++PS + R      +    +       +I+G NG+IW+S K+
Sbjct:   11 LVVPGTLLA-QGPYKNGRGTF------REGSRIYSTVIGLVDIKGNTIRVIPLEGPYIPEVGDNVIGKIVDVKFSSWVVDIGAPYPANLKIQDFTDEKIDLLR------TDLRKFFDIGDIIYAKVKAITEVNNIDLTTKGMPFNGGPLKGGQIVKITPSRVPRVIGRGGSMINMIKKLTMTRIIVGQNGWIWVSGKN 195

[Close]

BLAST of EMLSAG00000003158 vs. SwissProt
Match: gi|73919275|sp|Q5JIR5.1|RRP4_THEKO (RecName: Full=Exosome complex component Rrp4)

HSP 1 Score: 72.4034 bits (176), Expect = 1.382e-13
Identity = 53/198 (26.77%), Postives = 98/198 (49.49%), Query Frame = 0

Query:   22 FVTPGDIITRESGYMRGHGTYASDEGNEEKECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKY--GKLEGGTVVKVSPSLIKR------QKTHFHTFPGGVSMILGLNGFIWLSIKS 211
             V PG ++  +  +  G GT+   EGN     + ++V G+V+    +IRV+PL   Y  E+GD ++G+IV+V+   W V++ +   A L +         +  R    +  +R     GD+I A+V+   +   + + T+ + +  G L GG +V ++PS + R         +      G  +I+G NG++W+S K+
Sbjct:   11 LVVPGTLLA-QGPFKNGRGTFR--EGN----AIYSTVIGLVEIRGNVIRVIPLEGPYIPEVGDNVLGKIVDVKFSSWTVDIGAPYQASLRVQDA------VEERIDLLKTDLRKIFDIGDIIYAKVKAFNEVNQIDLTTKGMPFKGGPLRGGQLVTITPSKVPRLIGKGGSMINMIKTLTGTRIIVGQNGWVWVSGKN 195

[Close]

BLAST of EMLSAG00000003158 vs. SwissProt
Match: gi|29336821|sp|Q8U0L8.1|RRP4_PYRFU (RecName: Full=Exosome complex component Rrp4)

HSP 1 Score: 71.2478 bits (173), Expect = 4.388e-13
Identity = 53/198 (26.77%), Postives = 98/198 (49.49%), Query Frame = 0

Query:   22 FVTPGDIITRESGYMRGHGTYASDEGNEEKECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKY--GKLEGGTVVKVSPSLIKRQKTHFHTFPGGVS------MILGLNGFIWLSIKS 211
             V PG ++  +  Y  G GT+      +E   + ++V G+V      IRV+PL   Y  E+GD ++G+IV+V+   W V++ S   A L +        +L R        +R +   GD+I A+V+ + +  ++ + T+ + +  G L GG ++K++ S + R      +    +       +I+G NG+IW+S K+
Sbjct:   11 LVVPGTLLA-QGPYKNGRGTF------KEGSRIYSTVIGLVDIKGNTIRVIPLEGPYIPEVGDNVLGKIVDVKFSSWTVDIGSPYSATLKIQDYTDEKIDLLR------TDLRKFFDIGDIIYAKVKGINEVNNIELTTKGMPFNGGPLRGGQIIKITSSKVPRVIGKGGSMINMIKKLTQSRIIVGQNGWIWISSKN 195

[Close]

BLAST of EMLSAG00000003158 vs. SwissProt
Match: gi|29336583|sp|O59221.1|RRP4_PYRHO (RecName: Full=Exosome complex component Rrp4)

HSP 1 Score: 69.707 bits (169), Expect = 1.261e-12
Identity = 52/198 (26.26%), Postives = 98/198 (49.49%), Query Frame = 0

Query:   22 FVTPGDIITRESGYMRGHGTYASDEGNEEKECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKY--GKLEGGTVVKVSPSLIKRQKTHFHTFPGGVS------MILGLNGFIWLSIKS 211
             V PG ++  +  Y  G GT+       E   + ++V G+V      IRV+PL   Y  E+GD ++G+IV+V+   W V++ +   A L +        +L R        +R +   GD+I  +V+ + +  ++ + T+ + +  G L+GG +VK++PS + R      +    +       +I+G NG+IW++ K+
Sbjct:   11 LVVPGTLLA-QGPYKNGRGTF------REGSRIYSTVIGLVDIKGNTIRVIPLEGPYIPEVGDNVIGKIVDVKFSSWVVDIGAPYLANLKIQDFTDEKIDLLR------TDLRKFFDIGDIIYGKVKAITEVNNIDLTTKGMPFNGGPLKGGQIVKITPSRVPRVIGRGGSMINMIKKLTMTRIIVGQNGWIWVNGKN 195

[Close]

BLAST of EMLSAG00000003158 vs. Select Arthropod Genomes
Match: EFX88158.1 (hypothetical protein DAPPUDRAFT_305543 [Daphnia pulex])

HSP 1 Score: 300.442 bits (768), Expect = 4.308e-101
Identity = 156/313 (49.84%), Postives = 212/313 (67.73%), Query Frame = 0

Query:    1 MDISLANEWEKPP----EDVDEATTFVTPGDIITRESGYMRGHGTYASDEGNEEKECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKYGKLEGGTVVKVSPSLIKRQKTHFHTFPGGVSMILGLNGFIWLSIKSMISISEEDDDYEKQEYENGSNSFDDSDLGLIESNPRLAIARLRNVVLALAANGVQLWDTSIIYGFKASEN--YDPKSLLKRDVMYDVARKTQLRLEXD 307
            +DI LA+E   PP     D  E    VTPG +IT+E+G+MRGHGTY  D+      CL +SV GVV+RVN+LI V PL+S Y GEIGDV++GR+ EV QKRWK++ N+RLD++L L SVNLPGGELRRRS+EDEL+MR YL+EGDL+SAEVQ ++ DG++S+HTRS+KYGKL  G ++KVSPSLI+RQKTHFH  P G S+I+G NGF+W+    +               ++G+  F   +L  +    R AI+RLRN V ALA   + ++DTSI++ + AS N   + K LL  D + ++A   + + E +
Sbjct:    2 VDIRLASEV--PPFHIVADSTEPKHLVTPGSLITKETGFMRGHGTYMQDD------CLYSSVAGVVERVNQLISVRPLKSRYHGEIGDVVIGRVTEVSQKRWKLDTNARLDSVLLLQSVNLPGGELRRRSAEDELAMRQYLKEGDLVSAEVQNIFNDGALSLHTRSMKYGKLSQGCLIKVSPSLIRRQKTHFHNLPCGASIIMGNNGFVWICPTLL---------------DDGAGGF-VQNLETVPHADRQAISRLRNCVTALAHCKMMIYDTSIMHAYDASVNAGLEIKDLLLPDKIKEIALMVRKQFEME 290

[Close]

BLAST of EMLSAG00000003158 vs. Select Arthropod Genomes
Match: EEB14694.1 (Exosome complex exonuclease RRP4, putative [Pediculus humanus corporis])

HSP 1 Score: 293.123 bits (749), Expect = 3.924e-98
Identity = 148/289 (51.21%), Postives = 197/289 (68.17%), Query Frame = 0

Query:   17 DEATTFVTPGDIITRESGYMRGHGTYASDEGNEEKECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKYGKLEGGTVVKVSPSLIKRQKTHFHTFPGGVSMILGLNGFIWLSIKSMISISEEDDDYEKQEYENGSNSFDDSDLGLIESNPRLAIARLRNVVLALAANGVQLWDTSIIYGFKASENYDPKSLLKRDVMYDVARKTQLRLE 305
            ++ +   TPG+ IT ++G+MRGHGTY  D+ N  K    ASV G V++VNKLI + PL+S Y GEIGDV+VGRI EVQQKRWKV+ NSRLD+IL LSSVNLPGGELRRRS EDE  MR YL+EGDLISAE+Q +  DG++ ++TRSLKYGKL  G ++KV PSL++R KTHFH+ P G ++ILG NGFIW++  ++               E+    F       +    R+ ++RLRN +LALA + + L+DTS++Y ++ S+ Y    LL  + M DVA  T LRL+
Sbjct:   22 NDTSNIYTPGETITCQTGFMRGHGTYVDDDNNALK----ASVAGSVEQVNKLISMRPLKSRYFGEIGDVIVGRITEVQQKRWKVDTNSRLDSILSLSSVNLPGGELRRRSVEDEQMMRKYLQEGDLISAEIQNILSDGTLQLYTRSLKYGKLSQGILLKVFPSLVRRSKTHFHSLPCGANIILGNNGFIWITPAAL---------------EDKKGGFTQDLKYKVSKTDRIVLSRLRNCILALANSKMPLYDTSVMYAYEESQKYTVSELLAPEPMLDVAVLTTLRLQ 291

[Close]

BLAST of EMLSAG00000003158 vs. Select Arthropod Genomes
Match: gb|EEZ98806.1| (Exosome complex component RRP4-like Protein [Tribolium castaneum])

HSP 1 Score: 291.967 bits (746), Expect = 9.800e-98
Identity = 158/287 (55.05%), Postives = 196/287 (68.29%), Query Frame = 0

Query:   24 TPGDIITRESGYMRGHGTYASDEGNEEKECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKYGKLEGGTVVKVSPSLIKRQKTHFHTFPGGVSMILGLNGFIWLSIKSMISISEEDDDYEKQEYENGSNSFDDS-----DLGLIESNP-RLAIARLRNVVLALAANGVQLWDTSIIYGFKASENYDPKSLLKRDVMYDVARKTQLRL 304
            TPG +IT ++ +MRGHGTY      EE+  L +SV GV ++VN LI + PL+S Y GE+GDV+VGR+ EVQQKRWKV+ NSRLD++L LSSVNLPGGELRRRS+EDE  MR YL+EGDLISAEVQ++Y DGS+S+HTRSLKYGKL  G +VKV PSLIKR KTHFH F  G S+ILG NGFIW+                   Y   SN+ D++     +L  + S P R  I RLRN +LAL  + + L+DTSI+Y F+ S+ Y    LL  + M DVA  TQ RL
Sbjct:   29 TPGQVITEQNEFMRGHGTY------EEEGFLKSSVAGVKEQVNNLISIRPLKSRYNGEVGDVVVGRVTEVQQKRWKVDTNSRLDSVLLLSSVNLPGGELRRRSAEDEHMMRQYLQEGDLISAEVQSVYSDGSLSLHTRSLKYGKLSQGILVKVFPSLIKRSKTHFHNFYVGASIILGNNGFIWI-------------------YPTVSNAEDNAGGFVQNLEQVVSRPERETIGRLRNCILALIQSKMMLYDTSILYAFEESQKYSVAELLIPEAMVDVAILTQDRL 290

[Close]

BLAST of EMLSAG00000003158 vs. Select Arthropod Genomes
Match: EAA05284.3 (AGAP011211-PA [Anopheles gambiae str. PEST])

HSP 1 Score: 290.041 bits (741), Expect = 6.597e-97
Identity = 156/306 (50.98%), Postives = 205/306 (66.99%), Query Frame = 0

Query:    1 MDISLANEWEKPPEDVDEATT--FVTPGDIITRESGYMRGHGTYASDEGNEEKECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKYGKLEGGTVVKVSPSLIKRQKTHFHTFPGGVSMILGLNGFIWLSIKSMISISEEDDDYEKQEYENGSNSFDDSDLGLIESNPRLAIARLRNVVLALAANGVQLWDTSIIYGFKASENYDPKSLLKRDVMYDVARKTQLRL 304
            + I LA +    P   DE+ +    TPG+++T + G+MRGHGTY  D+       + +SV GV+ +VNKLI V  L+  Y GEIGDV+V R+ EVQ+KRWKV+ NSRLD++L LSSVNLPGGELRRR  EDE  MR YL+EGDLISAEVQ ++ DG++S+HTRSLKYGKL  G +VKV PSLI+R+KTHFH  P G S+ILG NGFIW+S   M+       + E  E    + + DD    ++    R  IARLRN +LALA   + L+DTSI+Y ++ S+ Y+   LL ++ M D+A  TQ RL
Sbjct:    5 VSIRLACDRVNIPLISDESKSQRLFTPGEVVTSQQGFMRGHGTYMEDD------TIKSSVAGVMVQVNKLITVKALKGRYVGEIGDVVVARVTEVQEKRWKVDTNSRLDSMLLLSSVNLPGGELRRRGVEDEKQMRKYLQEGDLISAEVQNVHSDGTLSLHTRSLKYGKLAQGILVKVFPSLIQRRKTHFHNLPCGASIILGNNGFIWIS--PMM-------NSEGGEGGGFTQNLDD----VVTKEDRQTIARLRNCILALAHCKMMLYDTSILYAYEESQKYEVSELLHQECMTDIAFLTQHRL 291

[Close]

BLAST of EMLSAG00000003158 vs. Select Arthropod Genomes
Match: AHN56566.1 (Rrp4, isoform B [Drosophila melanogaster])

HSP 1 Score: 288.115 bits (736), Expect = 3.345e-96
Identity = 150/297 (50.51%), Postives = 201/297 (67.68%), Query Frame = 0

Query:    8 EWEKPPEDVDEATTFVTPGDIITRESGYMRGHGTYASDEGNEEKECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKYGKLEGGTVVKVSPSLIKRQKTHFHTFPGGVSMILGLNGFIWLSIKSMISISEEDDDYEKQEYENGSNSFDDSDLGLIESNPRLAIARLRNVVLALAANGVQLWDTSIIYGFKASENYDPKSLLKRDVMYDVARKTQLRL 304
            +W       +E     TPG+++  E+G+MRGHGT+  DE       + +SV GV+++VNKLI V PL+S Y GEIGDV+V R+ EVQQKRW+V+ NSRLD+IL LSSVNLPGGELRRRS+EDE  MR YL EGDLISAEVQ ++++GS+S++TRSLKYGKL  G +VKV P+L+KR+K HFH  P G S+ILG NG+IW+S              + QE E G   F  +    +    R  IARLRN +LALA   + ++DTSI Y ++ S  Y+   LL+++ +YD+ ++TQ RL
Sbjct:   15 DWRDLAAQTEEQPRVYTPGEVLMPEAGFMRGHGTFVEDEN------IKSSVAGVIQKVNKLISVRPLKSRYVGEIGDVVVARVSEVQQKRWRVDTNSRLDSILLLSSVNLPGGELRRRSAEDEQMMRRYLDEGDLISAEVQNIFEEGSLSLYTRSLKYGKLSQGILVKVFPALVKRRKMHFHNLPCGASVILGNNGYIWIS------------PTKGQEEEGGEGGFAQNLNEHVPRADREVIARLRNSILALAKCKLMIYDTSIQYAYEESLRYEAHELLQQNAIYDIGQQTQARL 293

[Close]

BLAST of EMLSAG00000003158 vs. Select Arthropod Genomes
Match: AAF47028.1 (Rrp4, isoform A [Drosophila melanogaster])

HSP 1 Score: 288.115 bits (736), Expect = 3.345e-96
Identity = 150/297 (50.51%), Postives = 201/297 (67.68%), Query Frame = 0

Query:    8 EWEKPPEDVDEATTFVTPGDIITRESGYMRGHGTYASDEGNEEKECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKYGKLEGGTVVKVSPSLIKRQKTHFHTFPGGVSMILGLNGFIWLSIKSMISISEEDDDYEKQEYENGSNSFDDSDLGLIESNPRLAIARLRNVVLALAANGVQLWDTSIIYGFKASENYDPKSLLKRDVMYDVARKTQLRL 304
            +W       +E     TPG+++  E+G+MRGHGT+  DE       + +SV GV+++VNKLI V PL+S Y GEIGDV+V R+ EVQQKRW+V+ NSRLD+IL LSSVNLPGGELRRRS+EDE  MR YL EGDLISAEVQ ++++GS+S++TRSLKYGKL  G +VKV P+L+KR+K HFH  P G S+ILG NG+IW+S              + QE E G   F  +    +    R  IARLRN +LALA   + ++DTSI Y ++ S  Y+   LL+++ +YD+ ++TQ RL
Sbjct:   15 DWRDLAAQTEEQPRVYTPGEVLMPEAGFMRGHGTFVEDEN------IKSSVAGVIQKVNKLISVRPLKSRYVGEIGDVVVARVSEVQQKRWRVDTNSRLDSILLLSSVNLPGGELRRRSAEDEQMMRRYLDEGDLISAEVQNIFEEGSLSLYTRSLKYGKLSQGILVKVFPALVKRRKMHFHNLPCGASVILGNNGYIWIS------------PTKGQEEEGGEGGFAQNLNEHVPRADREVIARLRNSILALAKCKLMIYDTSIQYAYEESLRYEAHELLQQNAIYDIGQQTQARL 293

[Close]

BLAST of EMLSAG00000003158 vs. Select Arthropod Genomes
Match: XP_006568548.2 (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC413484 [Apis mellifera])

HSP 1 Score: 252.677 bits (644), Expect = 8.821e-79
Identity = 119/184 (64.67%), Postives = 150/184 (81.52%), Query Frame = 0

Query:   24 TPGDIITRESGYMRGHGTYASDEGNEEKECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKYGKLEGGTVVKVSPSLIKRQKTHFHTFPGGVSMILGLNGFIWL 207
            TPG+ I+ +S ++RGHGTY  DE       L ASV G++++VNKLI + PL++ YQGEIGDV+VGRI EVQQKRWKV+ NS+LD++L LSSVNLPGGELRRRS+EDE +MR YL+EGDLI AEVQ+ + DGS+S+HTR LKYGKL  G ++KVSP+LIKR+KTHFHT   G S+ILG NG+IW+
Sbjct:   32 TPGEEISSQSDFLRGHGTYVDDENT-----LRASVAGILEKVNKLISIKPLKARYQGEIGDVVVGRITEVQQKRWKVDTNSKLDSVLLLSSVNLPGGELRRRSAEDEQTMRRYLQEGDLICAEVQSTFVDGSLSLHTRVLKYGKLSQGIMLKVSPALIKRKKTHFHTLENGASLILGNNGYIWI 210

[Close]

BLAST of EMLSAG00000003158 vs. Select Arthropod Genomes
Match: gb|KPM02911.1| (exosome complex component RRP4-like protein [Sarcoptes scabiei])

HSP 1 Score: 237.269 bits (604), Expect = 1.707e-76
Identity = 117/207 (56.52%), Postives = 151/207 (72.95%), Query Frame = 0

Query:   22 FVTPGDIITRESGYMRGHGTYASD--EGNEEKEC-----------------LIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKYGKLEGGTVVKVSPSLIKRQKTHFHTFPGGVSMILGLNGFIWLSI 209
            +V PGD IT +  YMRGHGTY  D  E N E++                  L++S+ G+V+ +N+LI V PLR+ Y G IGDV++GRI++VQQKRWKVE NSRL +IL LSSVNLPGGELRRR+SEDEL MR YL EGDLI AEVQT+Y+DGS+ ++TRSLKYGKL  G +++VSPS+I ++K H H  P GV ++LG NG I++S+
Sbjct:   31 YVLPGDCITTDLNYMRGHGTYQDDFIEDNYEEDVNDGENDDDHMQPIIQKRLVSSLAGIVEPINRLISVRPLRTRYVGSIGDVVIGRIIDVQQKRWKVETNSRLSSILQLSSVNLPGGELRRRTSEDELVMRQYLSEGDLICAEVQTIYEDGSLGLYTRSLKYGKLGQGLIIQVSPSMIAKRKIHTHNLPFGVFVVLGNNGLIFVSV 237

[Close]

BLAST of EMLSAG00000003158 vs. Select Arthropod Genomes
Match: gb|KFM70498.1| (Exosome complex component RRP4, partial [Stegodyphus mimosarum])

HSP 1 Score: 162.54 bits (410), Expect = 4.068e-49
Identity = 82/144 (56.94%), Postives = 105/144 (72.92%), Query Frame = 0

Query:    1 MDISLANEWEKPPEDVDEATTFVTPGDIITRESGYMRGHGTYASDEGNEEKECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLIS 144
            +DI L+ E  +     +E   FVTPG +I+ + G+MRGHGT+A     +E + + A+V G V+R+NKL  V P RS Y GE+GDV+VGRIVEVQ KRW V+VN+RL+AIL L+SVNLPGGELRR++ EDEL MR YL  GDLIS
Sbjct:    2 IDIRLSRETSEEESPAEEINFFVTPGFVISSDPGFMRGHGTWA-----DEDDKICATVAGTVERINKLYSVRPQRSRYSGEVGDVVVGRIVEVQHKRWSVDVNARLNAILLLTSVNLPGGELRRKTEEDELMMRNYLEVGDLIS 140

[Close]

BLAST of EMLSAG00000003158 vs. Select Arthropod Genomes
Match: gb|KFM70497.1| (Exosome complex component RRP4, partial [Stegodyphus mimosarum])

HSP 1 Score: 87.0409 bits (214), Expect = 1.375e-20
Identity = 54/127 (42.52%), Postives = 71/127 (55.91%), Query Frame = 0

Query:  163 LKYGKLEGGTVVKVSPSLIKRQKTHFHTFPGGVSMILGLNGFIWLSIKSMISISEEDDDYEKQEYENGSNSFDDSDLGLIESNPRLAIARLRNVVLALAANGVQLWDTSIIYGFKASENYDPKSLLK 289
            +KYGKL  G +VKV  SL+ R+KTHFH    G+ +IL  NG+IW++      IS ED        E G  +    +L  I    R +IARLRN +LALA     L DT I+Y + AS  Y+ K LL+
Sbjct:    1 MKYGKLSQGQLVKVPSSLVLRKKTHFHDIVSGIQVILSNNGYIWIA-----PISGED-------IETGGFA---QNLECISKVDRESIARLRNCILALAKYNKMLSDTIILYAYNASLTYETKDLLR 112

[Close]

BLAST of EMLSAG00000003158 vs. nr
Match: gi|290462865|gb|ADD24480.1| (Exosome complex exonuclease RRP4 [Lepeophtheirus salmonis])

HSP 1 Score: 377.096 bits (967), Expect = 4.519e-130
Identity = 185/186 (99.46%), Postives = 186/186 (100.00%), Query Frame = 0

Query:    1 MDISLANEWEKPPEDVDEATTFVTPGDIITRESGYMRGHGTYASDEGNEEKECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKYGKLEGGTVVKVSPSLIKRQKT 186
            MDISLANEWEKPPEDVDEATTFVTPGDIITRESGYMRGHGTYASDEGNEEKECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKYGKLEGGTV+KVSPSLIKRQKT
Sbjct:    1 MDISLANEWEKPPEDVDEATTFVTPGDIITRESGYMRGHGTYASDEGNEEKECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKYGKLEGGTVIKVSPSLIKRQKT 186

[Close]

BLAST of EMLSAG00000003158 vs. nr
Match: gi|1072257734|ref|XP_018414037.1| (PREDICTED: exosome complex component RRP4 isoform X1 [Nanorana parkeri])

HSP 1 Score: 312.383 bits (799), Expect = 4.972e-103
Identity = 166/306 (54.25%), Postives = 215/306 (70.26%), Query Frame = 0

Query:    1 MDISLANEWEKPPEDVDEATT--FVTPGDIITRESGYMRGHGTYASDEGNEEKECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKYGKLEGGTVVKVSPSLIKRQKTHFHTFPGGVSMILGLNGFIWLSIKSMISISEEDDDYEKQEYENGSNSFDDSDLGLIESNPRLAIARLRNVVLALAANGVQLWDTSIIYGFKASENYDPKSLLKRDVMYDVARKTQLRL 304
            +DI L    ++  E V   TT   V PGD IT +S +MRGHGTY  D+       L+ASV GVV+RVNKLI V  L++ Y GE+GD++VGR+ EVQQKRWKV+ N+RLD++L LSSVNLPGGELRRRS+EDEL+MR+YL+EGDLISAEVQ +Y DG++S+HTRSLKYGKL  G +VKVSPSL+KR+KTHFHT P G S+ILG NGFIWLS              E  E E G      ++L  +  + R  I+RLRN +LALAA  + ++DTS++Y ++AS  +  K LLK +V+ D+  +T+ RL
Sbjct:    3 VDIRLPVARKRVTEAVTADTTGHLVAPGDTITADSSFMRGHGTYMEDDK------LLASVAGVVERVNKLICVRALKTRYNGEVGDIVVGRVTEVQQKRWKVDTNARLDSVLLLSSVNLPGGELRRRSAEDELAMRSYLQEGDLISAEVQAVYSDGALSLHTRSLKYGKLGQGVLVKVSPSLVKRRKTHFHTLPCGASIILGNNGFIWLSPTP-----------EVTEEEAGGFV---TNLEPVSLSDREVISRLRNCILALAAQKMLMYDTSVLYCYEASLAHQIKDLLKTEVIEDIVMETRQRL 288

[Close]

BLAST of EMLSAG00000003158 vs. nr
Match: gi|908424596|ref|XP_013073569.1| (PREDICTED: exosome complex component RRP4-like [Biomphalaria glabrata])

HSP 1 Score: 311.227 bits (796), Expect = 1.127e-102
Identity = 159/291 (54.64%), Postives = 205/291 (70.45%), Query Frame = 0

Query:   17 DEATTFVTPGDIITRESGYMRGHGTYASDEGNEEKECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKYGKLEGGTVVKVSPSLIKRQKTHFHTFPGGVSMILGLNGFIWLSIKSMISISEEDDDYEKQEYENGSNSFDDSDLGLIESNPRLAIARLRNVVLALAANGVQLWDTSIIYGFKASENYDPKSLLKRDVMYDVARKTQLRLEXD 307
            D+    VTPGD+IT ++G+MRGHGTY S++      CL +SV G+V+RVNKL+ V PL++ Y GEIGDV++GRI+EV QK+W+VE +SR+D+IL LSSVNLPGGELRRRS EDE  MR YL+EGDLISAEVQ +  DG +S+HTRSLKYGKL  GT+VKVSPSL+ R+KTHFH  P G S+ILG NG+IW+                 +  E G     +++L  +  + R AIARLRN VLALA   V L+DTSI+Y F+AS+ Y  K +LK +V+ +V    Q RLE +
Sbjct:   21 DDPGNIVTPGDVITADTGFMRGHGTYMSED------CLHSSVAGMVERVNKLVSVRPLKTRYNGEIGDVVIGRIIEVSQKKWRVETHSRMDSILMLSSVNLPGGELRRRSEEDEKMMRNYLKEGDLISAEVQNVMSDGCLSLHTRSLKYGKLGQGTLVKVSPSLVLRRKTHFHNLPVGASIILGNNGYIWIC--------------PTEHVEAGETGGYETNLQPVSRSEREAIARLRNCVLALADQNVLLFDTSILYTFEASQKYAVKDILKPEVILEVVDLVQQRLELE 291

[Close]

BLAST of EMLSAG00000003158 vs. nr
Match: gi|1126164945|ref|XP_019614235.1| (PREDICTED: exosome complex component RRP4-like [Branchiostoma belcheri])

HSP 1 Score: 309.686 bits (792), Expect = 4.031e-102
Identity = 160/292 (54.79%), Postives = 204/292 (69.86%), Query Frame = 0

Query:   17 DEATTFVTPGDIITRESGYMRGHGTYASDEGNEEKECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKYGKLEGGTVVKVSPSLIKRQKTHFHTFPGGVSMILGLNGFIWLSIKSMISISEEDDDYEKQEYENGSNSFDDSDLGLIESNPRLAIARLRNVVLALAANGVQLWDTSIIYGFKASENYDPKSLLKRDVMYDVARKTQLRLEXDN 308
            D     VTPGD+IT ++GYMRGHGTY  D+       L AS+ GVV+RVNKLI V PL++ Y GEIGDV+VGR+ EV QKRW+V+VNSRLDAIL LS+VNLPGGELRRRS+EDEL MR YL+EGDLISAEVQ ++ DG++S+HTRSLKYGKL  G +V+VSPSL+KR++THFH    G S+ILG NG++W+S        E    YE+             DL  + S  R  IAR RN +LALA + + L+DTS++Y ++AS  Y  K LL+ DV   VA  T+ RL+ ++
Sbjct:   18 DAPKHLVTPGDVITADTGYMRGHGTYMDDDK------LKASLAGVVERVNKLICVQPLKTRYNGEIGDVVVGRVSEVGQKRWRVDVNSRLDAILMLSAVNLPGGELRRRSAEDELMMREYLQEGDLISAEVQAIFHDGALSLHTRSLKYGKLAQGVMVQVSPSLVKRRRTHFHNLACGASVILGNNGYVWISPTVNNERGESSGGYEQ-------------DLEPVPSADREVIARQRNCILALATHKLMLYDTSVLYAYEASRQYQVKDLLQPDVAEKVADDTRQRLQMES 290

[Close]

BLAST of EMLSAG00000003158 vs. nr
Match: gi|1126218270|ref|XP_019643221.1| (PREDICTED: exosome complex component RRP4-like [Branchiostoma belcheri])

HSP 1 Score: 308.916 bits (790), Expect = 1.053e-101
Identity = 165/306 (53.92%), Postives = 213/306 (69.61%), Query Frame = 0

Query:    3 ISLANEWEKPPEDVDEATTFVTPGDIITRESGYMRGHGTYASDEGNEEKECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKYGKLEGGTVVKVSPSLIKRQKTHFHTFPGGVSMILGLNGFIWLSIKSMISISEEDDDYEKQEYENGSNSFDDSDLGLIESNPRLAIARLRNVVLALAANGVQLWDTSIIYGFKASENYDPKSLLKRDVMYDVARKTQLRLEXDN 308
            I+LA E  K     D     VTPGD+IT ++GYMRGHGTY   +G++ K    AS+ GVV+RVNKLI V PL++ Y GEIGDV+VGR+ EV QKRW+V+VNSRLDA+L LS+VNLPGGELRRRS+EDEL MR YL+EGDLISAEVQ ++ DG++S+HTRSLKYGKL  G +V+VSPSL+KR+KTHFH    G S+ILG NG++W+S        E    YE+             DL  + S  R  IARLRN +LALA + + L+DTS++Y ++AS  +  K LL+ DV   VA  T+ RL+ ++
Sbjct:    5 ITLA-ESRKKTSVPDAPKHLVTPGDVITADTGYMRGHGTYM--DGDKLK----ASLAGVVERVNKLICVQPLKTRYNGEIGDVVVGRVSEVGQKRWRVDVNSRLDAVLMLSAVNLPGGELRRRSAEDELMMREYLQEGDLISAEVQAIFHDGALSLHTRSLKYGKLAQGVMVQVSPSLVKRRKTHFHNLACGASVILGNNGYVWISPTVNDERGESSGGYEQ-------------DLEPVPSADREVIARLRNCILALATHKLMLYDTSVLYAYEASRQHQVKDLLQPDVAEKVADDTRQRLQMES 290

[Close]

BLAST of EMLSAG00000003158 vs. nr
Match: gi|591372831|ref|XP_007061116.1| (PREDICTED: exosome complex component RRP4 [Chelonia mydas])

HSP 1 Score: 308.531 bits (789), Expect = 1.668e-101
Identity = 155/283 (54.77%), Postives = 201/283 (71.02%), Query Frame = 0

Query:   22 FVTPGDIITRESGYMRGHGTYASDEGNEEKECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKYGKLEGGTVVKVSPSLIKRQKTHFHTFPGGVSMILGLNGFIWLSIKSMISISEEDDDYEKQEYENGSNSFDDSDLGLIESNPRLAIARLRNVVLALAANGVQLWDTSIIYGFKASENYDPKSLLKRDVMYDVARKTQLRL 304
             V PGD IT ++GYMRGHGTY  DE       L+ASV G V+RVNKLI V  L++ Y GE+GD++VGR+ EVQQKRWKVE N+RLD++L LSS+NLPGGELRRRS+EDEL+MR YL+EGDLISAEVQ ++ DG++S+HTRSLKYGKL  G +V+VSPSL+KRQKTHFH  P G S+ILG NGFIW+              Y   E +N       ++L  +  + R  I+RLRN +LAL A  + L+DTSI+Y ++AS  +  K +LK +VM ++  +T+ RL
Sbjct:   27 LVAPGDTITTDTGYMRGHGTYMGDEK------LVASVAGAVERVNKLICVKALKTRYNGEVGDIVVGRVTEVQQKRWKVETNARLDSVLLLSSMNLPGGELRRRSAEDELAMRDYLQEGDLISAEVQAVFSDGAVSLHTRSLKYGKLGQGVLVQVSPSLVKRQKTHFHDLPCGASVILGNNGFIWI--------------YPTPEQKNEEAGGFVTNLEPVSLHDRAVISRLRNCILALVAQKLMLYDTSIVYCYEASHPHQIKDILKPEVMQEIVLETRQRL 289

[Close]

BLAST of EMLSAG00000003158 vs. nr
Match: gi|1108994175|ref|XP_019129018.1| (PREDICTED: exosome complex component RRP4-like [Larimichthys crocea] >gi|808866376|gb|KKF17094.1| Exosome complex component RRP4 [Larimichthys crocea])

HSP 1 Score: 307.76 bits (787), Expect = 2.469e-101
Identity = 161/283 (56.89%), Postives = 207/283 (73.14%), Query Frame = 0

Query:   22 FVTPGDIITRESGYMRGHGTYASDEGNEEKECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKYGKLEGGTVVKVSPSLIKRQKTHFHTFPGGVSMILGLNGFIWLSIKSMISISEEDDDYEKQEYENGSNSFDDSDLGLIESNPRLAIARLRNVVLALAANGVQLWDTSIIYGFKASENYDPKSLLKRDVMYDVARKTQLRL 304
             V PGDIIT ++G+MRGHGTY     +EEK  L ASV G V+RV+KLI V PL++ + GE+GDV+VGRI EVQQKRWKVE NSRLD++L LSSVNLPGGELRRRS+EDEL+MR YL+EGDLISAEVQ+++ DG++S+HTRSLKYGKL  G +V++SPSLIKRQKTHFH  P G S+ILG NGF+WL               E+QE E G      + L  +  + R  I+RLRN +LALAA+ V L+DTS++Y +++S  +  K +LK +VM ++   TQ +L
Sbjct:   26 LVVPGDIITSDTGFMRGHGTYV----DEEK--LTASVAGEVQRVDKLICVRPLKTRFNGEVGDVVVGRITEVQQKRWKVETNSRLDSVLLLSSVNLPGGELRRRSAEDELTMREYLQEGDLISAEVQSVFSDGALSLHTRSLKYGKLGQGVLVQLSPSLIKRQKTHFHNLPCGASIILGNNGFVWLYPTP-----------EQQEEEAGGFY---TSLEPVSLSDREVISRLRNCLLALAAHKVLLYDTSVLYCYESSVQHQVKDILKPEVMEEIVMLTQQKL 288

[Close]

BLAST of EMLSAG00000003158 vs. nr
Match: gi|1109006418|ref|XP_019133865.1| (PREDICTED: exosome complex component RRP4 [Larimichthys crocea] >gi|808861296|gb|KKF13168.1| Exosome complex component RRP4 [Larimichthys crocea])

HSP 1 Score: 307.76 bits (787), Expect = 2.523e-101
Identity = 161/283 (56.89%), Postives = 207/283 (73.14%), Query Frame = 0

Query:   22 FVTPGDIITRESGYMRGHGTYASDEGNEEKECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKYGKLEGGTVVKVSPSLIKRQKTHFHTFPGGVSMILGLNGFIWLSIKSMISISEEDDDYEKQEYENGSNSFDDSDLGLIESNPRLAIARLRNVVLALAANGVQLWDTSIIYGFKASENYDPKSLLKRDVMYDVARKTQLRL 304
             V PGDIIT ++G+MRGHGTY     +EEK  L ASV G V+RV+KLI V PL++ + GE+GDV+VGRI EVQQKRWKVE NSRLD++L LSSVNLPGGELRRRS+EDEL+MR YL+EGDLISAEVQ+++ DG++S+HTRSLKYGKL  G +V++SPSLIKRQKTHFH  P G S+ILG NGF+WL               E+QE E G      + L  +  + R  I+RLRN +LALAA+ V L+DTS++Y +++S  +  K +LK +VM ++   TQ +L
Sbjct:   26 LVVPGDIITSDTGFMRGHGTYV----DEEK--LTASVAGEVQRVDKLICVRPLKTRFNGEVGDVVVGRITEVQQKRWKVETNSRLDSVLLLSSVNLPGGELRRRSAEDELTMREYLQEGDLISAEVQSVFSDGALSLHTRSLKYGKLGQGVLVQLSPSLIKRQKTHFHNLPCGASIILGNNGFVWLYPTP-----------EQQEEEAGGFY---TSLEPVSLSDREVISRLRNCLLALAAHKVLLFDTSVLYCYESSVQHQVKDILKPEVMEEIVMLTQQKL 288

[Close]

BLAST of EMLSAG00000003158 vs. nr
Match: gi|395506258|ref|XP_003757452.1| (PREDICTED: exosome complex component RRP4 [Sarcophilus harrisii])

HSP 1 Score: 307.76 bits (787), Expect = 2.724e-101
Identity = 162/306 (52.94%), Postives = 215/306 (70.26%), Query Frame = 0

Query:    1 MDISLANEWEKPPEDVDEATT--FVTPGDIITRESGYMRGHGTYASDEGNEEKECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKYGKLEGGTVVKVSPSLIKRQKTHFHTFPGGVSMILGLNGFIWLSIKSMISISEEDDDYEKQEYENGSNSFDDSDLGLIESNPRLAIARLRNVVLALAANGVQLWDTSIIYGFKASENYDPKSLLKRDVMYDVARKTQLRL 304
            M+I L    ++ PE +D  T    V PGD IT ++G+MRGHGTY  DE       LIASV G V+RVNKLI V  L++ Y GE+GD++VGRI EVQQKRWKVE NSRLD++L LSS+NLPGGELRRRS+EDEL+MR +LREGDLISAEVQ ++ DG++S+HTRSLKYGKL  G +V+VSPSL+KRQKTHFH  P G S+ILG NGFIW+               E++E E G      ++L  +  + R  I+RLRN ++AL A  + L+DTS++Y ++AS ++  K +LK ++M ++  +T+ RL
Sbjct:    3 MEIRLPVARQRLPESLDRDTQKHLVVPGDTITTDTGFMRGHGTYMGDEK------LIASVAGSVERVNKLICVKALKTRYNGEVGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGELRRRSAEDELAMRDFLREGDLISAEVQAVFSDGAVSLHTRSLKYGKLGQGVLVQVSPSLVKRQKTHFHDLPCGASVILGNNGFIWIYPTP-----------EQREEEVGGFI---ANLEPVPLSDREVISRLRNCIVALVAQKMMLFDTSLLYCYEASLSHQIKDILKPEIMEEIVMETRQRL 288

[Close]

BLAST of EMLSAG00000003158 vs. nr
Match: gi|556960295|ref|XP_005990687.1| (PREDICTED: exosome complex component RRP4 [Latimeria chalumnae])

HSP 1 Score: 307.76 bits (787), Expect = 3.351e-101
Identity = 153/288 (53.12%), Postives = 205/288 (71.18%), Query Frame = 0

Query:   17 DEATTFVTPGDIITRESGYMRGHGTYASDEGNEEKECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKYGKLEGGTVVKVSPSLIKRQKTHFHTFPGGVSMILGLNGFIWLSIKSMISISEEDDDYEKQEYENGSNSFDDSDLGLIESNPRLAIARLRNVVLALAANGVQLWDTSIIYGFKASENYDPKSLLKRDVMYDVARKTQLRL 304
            +E    V PGD IT ++G+MRGHGTY  D+       L+ASV G V+RVNKLI V  L++ Y GE+GD++VGRI EVQQKRWKVE NSRLD++L LSSVNLPGGELRRRS+EDEL+MR YL+EGDLISAEVQ ++ DG++S+HTRSLKYGKL  G +V+VSPSL+KR+KTHFH  P G S+ILG NGFIW+              Y   E + G   F  ++L  +  + R  I+RLRN ++AL+   + L+DTS++Y ++AS ++  K +LK ++M ++  +T+ RL
Sbjct:   22 EENKHLVAPGDTITTDTGFMRGHGTYMDDDK------LVASVAGAVERVNKLICVRALKTRYNGEVGDIVVGRITEVQQKRWKVETNSRLDSVLQLSSVNLPGGELRRRSAEDELTMRNYLQEGDLISAEVQAVFSDGALSLHTRSLKYGKLGQGVLVQVSPSLVKRRKTHFHNLPCGASIILGNNGFIWI--------------YPTMEQKEGEGGF-ITNLECVPLSDREVISRLRNCIMALSVQKMLLYDTSVLYCYEASLHHQIKDILKPEIMEEIIMETRQRL 288

The following BLAST results are available for this feature:

BLAST of EMLSAG00000003158 vs. GO
BLAST of EMLSAG00000003158 vs. C. finmarchicus
BLAST of EMLSAG00000003158 vs. L. salmonis peptides
BLAST of EMLSAG00000003158 vs. SwissProt
BLAST of EMLSAG00000003158 vs. Select Arthropod Genomes
BLAST of EMLSAG00000003158 vs. nr
BLAST of EMLSAG00000003158 vs. Tigriopus kingsejongenis genes

BLAST of EMLSAG00000003158 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 25


Match Name	E-value	Identity	Description
-	4.618e-99	53.71	symbol:exosc2 "exosome component 2" species:7955 "...	[more]
-	1.225e-98	55.83	symbol:EXOSC2 "Uncharacterized protein" species:90...	[more]
-	4.451e-98	53.47	symbol:EXOSC2 "Uncharacterized protein" species:96...	[more]
-	7.992e-98	53.36	symbol:EXOSC2 "Exosome complex component RRP4" spe...	[more]
-	2.337e-97	53.13	symbol:Exosc2 "exosome component 2" species:10090 ...	[more]
-	5.501e-97	52.43	symbol:Exosc2 "exosome component 2" species:10116 ...	[more]
-	6.542e-97	52.43	symbol:EXOSC2 "Exosome complex component RRP4" spe...	[more]
-	3.295e-95	52.60	symbol:EXOSC2 "Uncharacterized protein" species:98...	[more]
-	1.054e-93	50.51	symbol:Rrp4 "Rrp4" species:7227 "Drosophila melano...	[more]
-	2.107e-92	51.39	symbol:EXOSC2 "Exosome complex component RRP4" spe...	[more]

Pages

BLAST of EMLSAG00000003158 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 6


Match Name	E-value	Identity	Description
gi\|592807298\|gb\|GAXK01147270.1\|	2.524e-84	65.87	TSA: Calanus finmarchicus comp42693_c0_seq1 transc...	[more]
gi\|592815323\|gb\|GAXK01139245.1\|	5.397e-5	54.17	TSA: Calanus finmarchicus comp194527_c0_seq1 trans...	[more]
gi\|592943902\|gb\|GAXK01014651.1\|	9.440e+0	30.00	TSA: Calanus finmarchicus comp8006_c3_seq10 transc...	[more]
gi\|592943905\|gb\|GAXK01014648.1\|	9.651e+0	30.00	TSA: Calanus finmarchicus comp8006_c3_seq7 transcr...	[more]
gi\|592943910\|gb\|GAXK01014643.1\|	9.889e+0	30.00	TSA: Calanus finmarchicus comp8006_c3_seq2 transcr...	[more]
gi\|592943911\|gb\|GAXK01014642.1\|	9.979e+0	30.00	TSA: Calanus finmarchicus comp8006_c3_seq1 transcr...	[more]

BLAST of EMLSAG00000003158 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1


Match Name	E-value	Identity	Description
EMLSAP00000003158	0.000e+0	100.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s1763:6194...	[more]

BLAST of EMLSAG00000003158 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 22


Match Name	E-value	Identity	Description
gi\|122143860\|sp\|Q2KID0.1\|EXOS2_BOVIN	1.581e-99	53.36	RecName: Full=Exosome complex component RRP4; AltN...	[more]
gi\|62900370\|sp\|Q8VBV3.1\|EXOS2_MOUSE	4.652e-99	53.13	RecName: Full=Exosome complex component RRP4; AltN...	[more]
gi\|13878748\|sp\|Q13868.2\|EXOS2_HUMAN	1.310e-98	52.43	RecName: Full=Exosome complex component RRP4; AltN...	[more]
gi\|1175376\|sp\|Q09704.1\|RRP4_SCHPO	4.897e-71	44.87	RecName: Full=Exosome complex component rrp4; AltN...	[more]
gi\|731671\|sp\|P38792.1\|RRP4_YEAST	2.956e-70	40.67	RecName: Full=Exosome complex component RRP4; AltN...	[more]
gi\|75217040\|sp\|Q9ZVT7.1\|RRP4_ARATH	5.587e-55	38.13	RecName: Full=Exosome complex component RRP4 homol...	[more]
gi\|29337011\|sp\|Q9V120.1\|RRP4_PYRAB	2.890e-14	27.27	RecName: Full=Exosome complex component Rrp4	[more]
gi\|73919275\|sp\|Q5JIR5.1\|RRP4_THEKO	1.382e-13	26.77	RecName: Full=Exosome complex component Rrp4	[more]
gi\|29336821\|sp\|Q8U0L8.1\|RRP4_PYRFU	4.388e-13	26.77	RecName: Full=Exosome complex component Rrp4	[more]
gi\|29336583\|sp\|O59221.1\|RRP4_PYRHO	1.261e-12	26.26	RecName: Full=Exosome complex component Rrp4	[more]

Pages

BLAST of EMLSAG00000003158 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 11


Match Name	E-value	Identity	Description
EFX88158.1	4.308e-101	49.84	hypothetical protein DAPPUDRAFT_305543 [Daphnia pu...	[more]
EEB14694.1	3.924e-98	51.21	Exosome complex exonuclease RRP4, putative [Pedicu...	[more]
gb\|EEZ98806.1\|	9.800e-98	55.05	Exosome complex component RRP4-like Protein [Tribo...	[more]
EAA05284.3	6.597e-97	50.98	AGAP011211-PA [Anopheles gambiae str. PEST]	[more]
AHN56566.1	3.345e-96	50.51	Rrp4, isoform B [Drosophila melanogaster]	[more]
AAF47028.1	3.345e-96	50.51	Rrp4, isoform A [Drosophila melanogaster]	[more]
XP_006568548.2	8.821e-79	64.67	PREDICTED: LOW QUALITY PROTEIN: uncharacterized pr...	[more]
gb\|KPM02911.1\|	1.707e-76	56.52	exosome complex component RRP4-like protein [Sarco...	[more]
gb\|KFM70498.1\|	4.068e-49	56.94	Exosome complex component RRP4, partial [Stegodyph...	[more]
gb\|KFM70497.1\|	1.375e-20	42.52	Exosome complex component RRP4, partial [Stegodyph...	[more]

Pages

BLAST of EMLSAG00000003158 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25


Match Name	E-value	Identity	Description
gi\|290462865\|gb\|ADD24480.1\|	4.519e-130	99.46	Exosome complex exonuclease RRP4 [Lepeophtheirus s...	[more]
gi\|1072257734\|ref\|XP_018414037.1\|	4.972e-103	54.25	PREDICTED: exosome complex component RRP4 isoform ...	[more]
gi\|908424596\|ref\|XP_013073569.1\|	1.127e-102	54.64	PREDICTED: exosome complex component RRP4-like [Bi...	[more]
gi\|1126164945\|ref\|XP_019614235.1\|	4.031e-102	54.79	PREDICTED: exosome complex component RRP4-like [Br...	[more]
gi\|1126218270\|ref\|XP_019643221.1\|	1.053e-101	53.92	PREDICTED: exosome complex component RRP4-like [Br...	[more]
gi\|591372831\|ref\|XP_007061116.1\|	1.668e-101	54.77	PREDICTED: exosome complex component RRP4 [Cheloni...	[more]
gi\|1108994175\|ref\|XP_019129018.1\|	2.469e-101	56.89	PREDICTED: exosome complex component RRP4-like [La...	[more]
gi\|1109006418\|ref\|XP_019133865.1\|	2.523e-101	56.89	PREDICTED: exosome complex component RRP4 [Larimic...	[more]
gi\|395506258\|ref\|XP_003757452.1\|	2.724e-101	52.94	PREDICTED: exosome complex component RRP4 [Sarcoph...	[more]
gi\|556960295\|ref\|XP_005990687.1\|	3.351e-101	53.13	PREDICTED: exosome complex component RRP4 [Latimer...	[more]

Pages

BLAST of EMLSAG00000003158 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0


Match Name	E-value	Identity	Description

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s1763	supercontig	LSalAtl2s1763:6194..7583 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016
Blast vs. GO	2014-04-02
TblastN vs C. finmarchicus TSA	2014-05-09
Blastp vs. self	2014-05-10
Blastp vs. SwissProt	2017-02-10
Blastp vs. Selected Arthropods	2017-02-20
Blastp vs. NR (2/2017)	2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins	2018-04-18

Properties


Property Name	Value
Logic name	ensemblgenomes
Description	maker-LSalAtl2s1763-augustus-gene-0.5
Biotype	protein_coding
Evidence	IEA
Note	Exosome complex component RRP4

Cross References

External references for this gene


Database	Accession
Ensembl Metazoa (gene)	EMLSAG00000003158 (primary cross-reference)

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
EMLSAT00000003158	EMLSAT00000003158-699005	Lepeophtheirus salmonis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at LSalAtl2s1763:6194..7583+

gene from alignment at LSalAtl2s1763:6194..7583+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAG00000003158-685924 ID=EMLSAG00000003158-685924|Name=EMLSAG00000003158|organism=Lepeophtheirus salmonis|type=gene|length=1390bp|location=Sequence derived from alignment at LSalAtl2s1763:6194..7583+ (Lepeophtheirus salmonis)
TTTATATGCAGCTGAATACAATTTGTTTATACTAATCAGCTGAAAAATAC
CTATGTAAATAATAAATAATTGCGAGTTCCATGCATGTTTGATGTTGCCC
GGTTATATCTTATTTTATGTTTATTAATTATCATCGAATACAGTTACCAT
GGATATTAGTTTAGCCAATGAATGGGAGAAACCTCCAGAAGATGTGGATG
AAGCGACTACCTTCGTGACTCCTGGAGATATTATAACCAGGTAACGTTTT
TGTATGATTAAAGTATAAATTATTATTATTGTCTGATACTGTACATTCTT
GATTTTAGAGAATCGGGTTACATGAGAGGACATGGAACGTACGCATCAGA
TGAAGGAAACGAGGAGAAGGAATGCTTGATTGCATCTGTTGGAGGAGTTG
TCAAACGAGTCAATAAATTAATACGCGTACTTCCACTGAGAAGTACCTAT
CAAGGTGAAATCGGAGATGTTCTCGTGGGTAGAATCGTTGAGGTTCAACA
AAAAAGATGGAAAGTGGAGGTAAATTCCCGTCTTGATGCTATTCTTCACC
TTTCATCTGTAAATCTCCCTGGGGGTGAGCTACGTCGAAGATCCTCTGAG
GATGAATTATCCATGCGGACATATTTGAGGGAAGGGGATCTCATCTCTGC
AGAAGTACAAACCCTTTATAAGGATGGTTCAATGTCAATTCACACGCGAT
CCCTCAAATATGGGAAATTGGAAGGTGGAACAGTTGTCAAAGGTTATTAT
GAGCACTGCTATAATTAATTATTCTTATGTATTCACCCTTACAATTTTCA
CTCAGTCTCCCCTTCACTAATAAAGCGACAAAAGACCCATTTCCACACGT
TCCCTGGAGGTGTTAGCATGATACTTGGTCTAAATGGATTCATATGGCTG
AGCATCAAATCAATGATCTCAATTTCTGAAGAAGATGATGATTACGAAAA
ACAAGAATATGAAAATGGCAGTAATTCTTTTGATGACTCAGATTTGGGAC
TCATAGAATCAAACCCTCGTTTAGCCATTGCTCGACTTAGAAACGTCGTT
CTCGCACTTGCTGCAAATGGTGTTCAGCTTTGGGATACTTCTATTATATA
CGGATTCAAGGCTTCAGAGAACTACGACCCAAAAAGTTTGCTTAAAAGAG
ATGTTATGTATGACGTGGCTAGGAAAACACAATTGAGACTGGAGMCTGAC
AATCATTAATATACATTATTATTAATATTAATTACTTTCAATTATATATA
AATGGATATTTTTTTATATTTTGCATTCTTCTAGGGTCCTTCTTGAAGGA
GGGTCCCTCTAAATTCCAACTTTTGATATCCTTTACAAATAAATCTTAGA
TTATATATTTGTAGCATAAGTTTGTCATACTGCTTTAAAG

Add to Basket

Pages

Pages

Pages

Pages

Search form