EMLSAG00000003219, EMLSAG00000003219-685985 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000003219 vs. C. finmarchicus
Match: gi|592920325|gb|GAXK01038050.1| (TSA: Calanus finmarchicus comp859328_c0_seq1 transcribed RNA sequence) HSP 1 Score: 106.301 bits (264), Expect = 6.916e-26 Identity = 47/110 (42.73%), Postives = 74/110 (67.27%), Query Frame = 0 Query: 2 DIGENSHSKRASKRYDLFEGQWKNKRYNQHRARVESAASVIDVKPPISSSFKHIKVKSKKLQKEEEKHTEVMTNNLILLRHLSEISVTKRIDDGEDKKIHWGDYYEDILM 111 D+ + S R S+R +L++ W +R++ HRARV+SA ID PP S+ H++ K KK Q+E+E+ + + NLI+L+HLS I+ +KR+DDG KK+HW D+Y I++ Sbjct: 1872 DVQTRTASSRPSRRRELYDLPWDRRRFSLHRARVQSAGPRIDCSPPSSAGLMHVRDKRKKDQQEKERQAVIQSQNLIMLQHLSHIARSKRVDDGNMKKMHWKDFYLQIMV 2201
BLAST of EMLSAG00000003219 vs. C. finmarchicus
Match: gi|592934411|gb|GAXK01024142.1| (TSA: Calanus finmarchicus comp2119175_c0_seq2 transcribed RNA sequence) HSP 1 Score: 30.4166 bits (67), Expect = 1.894e+0 Identity = 34/128 (26.56%), Postives = 58/128 (45.31%), Query Frame = 0 Query: 18 LFEGQWKNKRYNQHRARVESAASVI--DVKPPISSSFKHIKVKSKKLQKEEEKHTEVMT-NNLILLRHLSEISVTKRIDDGEDKKIHWGDYYEDILMLRQDQIERLKAESLRKLNKHNYSLRRDGGSS 142 +FE + + Y+ H V+ D++ PI SS K EE T++ T NL LL L E +T+ + ++K+ D Y + + D+ ++ ESLR N+H+ R + G+ Sbjct: 83 VFEDSIEEEEYDTHSETSFRDLKVVENDLENPIVSSIK------------EESMTDLPTKENLDLLTTLKETDITESATEKQEKEPETTDLYFEEKSVAYDKEYEVEEESLRIKNEHH---RENSGTC 421
BLAST of EMLSAG00000003219 vs. L. salmonis peptides
Match: EMLSAP00000003219 (pep:novel supercontig:LSalAtl2s:LSalAtl2s177:480974:485043:1 gene:EMLSAG00000003219 transcript:EMLSAT00000003219 description:"maker-LSalAtl2s177-augustus-gene-4.29") HSP 1 Score: 294.664 bits (753), Expect = 3.735e-103 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0 Query: 1 MDIGENSHSKRASKRYDLFEGQWKNKRYNQHRARVESAASVIDVKPPISSSFKHIKVKSKKLQKEEEKHTEVMTNNLILLRHLSEISVTKRIDDGEDKKIHWGDYYEDILMLRQDQIERLKAESLRKLNKHNYSLRRDGGSSKSS 145 MDIGENSHSKRASKRYDLFEGQWKNKRYNQHRARVESAASVIDVKPPISSSFKHIKVKSKKLQKEEEKHTEVMTNNLILLRHLSEISVTKRIDDGEDKKIHWGDYYEDILMLRQDQIERLKAESLRKLNKHNYSLRRDGGSSKSS Sbjct: 1 MDIGENSHSKRASKRYDLFEGQWKNKRYNQHRARVESAASVIDVKPPISSSFKHIKVKSKKLQKEEEKHTEVMTNNLILLRHLSEISVTKRIDDGEDKKIHWGDYYEDILMLRQDQIERLKAESLRKLNKHNYSLRRDGGSSKSS 145
BLAST of EMLSAG00000003219 vs. Select Arthropod Genomes
Match: gb|EFA03364.1| (hypothetical protein TcasGA2_TC013349 [Tribolium castaneum]) HSP 1 Score: 65.855 bits (159), Expect = 5.348e-13 Identity = 33/98 (33.67%), Postives = 54/98 (55.10%), Query Frame = 0 Query: 13 SKRYDLFEGQWKNKRYNQHRARVESAASVIDVKPPISSSFKHIKVKSKKLQKEEEKHTEVMTNNLILLRHLSEISVTKRIDDGEDKKIHWGDYYEDIL 110 S++ +L W+ +R+ HR +V+SA ID +PP+ +H+ +K KK QKE E+ E+ NN LL+ LS + T R+D+ +W + L Sbjct: 3 SRKENLLVRPWQQRRFENHRKKVQSAGPAIDTRPPLPR--QHVALKLKKRQKEAERCQEIEKNNFTLLKRLSYVMRTSRVDN------YWATPQPNFL 92
BLAST of EMLSAG00000003219 vs. Select Arthropod Genomes
Match: EEB19700.1 (conserved hypothetical protein [Pediculus humanus corporis]) HSP 1 Score: 65.855 bits (159), Expect = 9.956e-13 Identity = 33/82 (40.24%), Postives = 50/82 (60.98%), Query Frame = 0 Query: 13 SKRYDLFEGQWKNKRYNQHRARVESAASVIDVKPPISSSFKHIKVKSKKLQKEEEKHTEVMTNNLILLRHLSEISVTKRIDD 94 ++R L W+ +RYN H+ ++ +A SVID+ PP H+ +K KKLQKE E+ ++ N ILL+HL I KR+D+ Sbjct: 3 TRREKLLTRPWQLRRYNYHKKKLVNAVSVIDIGPPAERD--HVTIKLKKLQKERERQMKIEDENFILLQHLGSIMSKKRVDN 82
BLAST of EMLSAG00000003219 vs. Select Arthropod Genomes
Match: XP_016770253.1 (PREDICTED: uncharacterized protein LOC724459 [Apis mellifera]) HSP 1 Score: 48.9062 bits (115), Expect = 1.623e-7 Identity = 25/66 (37.88%), Postives = 36/66 (54.55%), Query Frame = 0 Query: 21 GQWKNKRYNQHRARVESAASVIDVKPPISSSFKHIKVKSKKLQKEEEKHTEVMTNNLILLRHLSEI 86 W+ + Y +HR+ V A IDV PP S H+ + +K +Q E EK +M N ILL+ L +I Sbjct: 24 SMWRPEDYERHRSNVRKATRAIDVDPPKSRP--HVVLNAKGMQLEREKQYRIMRENFILLKKLRDI 87
BLAST of EMLSAG00000003219 vs. nr
Match: gi|939266448|ref|XP_014253303.1| (PREDICTED: uncharacterized protein LOC106668762 [Cimex lectularius]) HSP 1 Score: 73.1738 bits (178), Expect = 6.332e-13 Identity = 35/82 (42.68%), Postives = 54/82 (65.85%), Query Frame = 0 Query: 13 SKRYDLFEGQWKNKRYNQHRARVESAASVIDVKPPISSSFK-HIKVKSKKLQKEEEKHTEVMTNNLILLRHLSEISVTKRID 93 ++R +L W+ +RY QHR +V+SA ID PP F+ H+ K KK+QKE E+ T+++++N LL+HLS I +T R+D Sbjct: 3 TRRENLLIRPWQERRYIQHRQKVKSALPAIDTTPP---PFREHVSCKLKKIQKESERCTQIISDNFTLLQHLSNIMITTRVD 81
BLAST of EMLSAG00000003219 vs. nr
Match: gi|1101346471|ref|XP_018899037.1| (PREDICTED: uncharacterized protein LOC109031758 [Bemisia tabaci]) HSP 1 Score: 73.1738 bits (178), Expect = 8.529e-13 Identity = 38/82 (46.34%), Postives = 52/82 (63.41%), Query Frame = 0 Query: 13 SKRYDLFEGQWKNKRYNQHRARVESAASVIDVKPPISSSFKHIKVKSKKLQKEEEKHTEVMTNNLILLRHLSEISVTKRIDD 94 SKR L W+ +RY HR +V SA IDV+PP + H+ KSKKLQKE E+ ++ +N IL+RHLS+I T R+D+ Sbjct: 3 SKREKLLIQPWQERRYIDHRRKVNSALPAIDVEPPATRG--HVLYKSKKLQKESERCAQITEDNFILIRHLSDIMRTHRVDN 82
BLAST of EMLSAG00000003219 vs. nr
Match: gi|939679163|ref|XP_014285056.1| (PREDICTED: uncharacterized protein LOC106686336 [Halyomorpha halys]) HSP 1 Score: 69.707 bits (169), Expect = 1.380e-11 Identity = 34/80 (42.50%), Postives = 53/80 (66.25%), Query Frame = 0 Query: 15 RYDLFEGQWKNKRYNQHRARVESAASVIDVKPPISSSFKHIKVKSKKLQKEEEKHTEVMTNNLILLRHLSEISVTKRIDD 94 R +L W+ +RY QHR +VE+A VID KPP+ H+ K KK Q+E+E+ +++++N LL+HLS I+ T R+D+ Sbjct: 5 RENLLSRPWQERRYIQHRHKVETALPVIDNKPPL--QHLHVNCKLKKHQREKERCAQIVSDNFTLLQHLSVITRTSRVDN 82
BLAST of EMLSAG00000003219 vs. nr
Match: gi|752867955|ref|XP_011251029.1| (PREDICTED: uncharacterized protein LOC105248118 [Camponotus floridanus] >gi|307186293|gb|EFN71956.1| hypothetical protein EAG_03961 [Camponotus floridanus]) HSP 1 Score: 65.0846 bits (157), Expect = 4.651e-11 Identity = 31/85 (36.47%), Postives = 50/85 (58.82%), Query Frame = 0 Query: 20 EGQWKNKRYNQHRARVESAASVIDVKPPISSSFKHIKVKSKKLQKEEEKHTEVMTNNLILLRHLSEISVTKRIDDGEDKKIHWGD 104 E W+ + Y +HR+RV+SA +DVKPP H+ +K+LQ E E+ T ++ +N ILL+ L EI KR + +++ W + Sbjct: 12 EPSWRRRAYERHRSRVKSARPTVDVKPP--EGRPHVSFNAKRLQLERERQTRILRDNFILLKKLREIMHRKRQIAEDTQRVQWQE 94
BLAST of EMLSAG00000003219 vs. nr
Match: gi|1008440536|ref|XP_975040.2| (PREDICTED: uncharacterized protein LOC663918 [Tribolium castaneum]) HSP 1 Score: 66.2402 bits (160), Expect = 2.514e-10 Identity = 33/98 (33.67%), Postives = 54/98 (55.10%), Query Frame = 0 Query: 13 SKRYDLFEGQWKNKRYNQHRARVESAASVIDVKPPISSSFKHIKVKSKKLQKEEEKHTEVMTNNLILLRHLSEISVTKRIDDGEDKKIHWGDYYEDIL 110 S++ +L W+ +R+ HR +V+SA ID +PP+ +H+ +K KK QKE E+ E+ NN LL+ LS + T R+D+ +W + L Sbjct: 4 SRKENLLVRPWQQRRFENHRKKVQSAGPAIDTRPPLPR--QHVALKLKKRQKEAERCQEIEKNNFTLLKRLSYVMRTSRVDN------YWATPQPNFL 93
BLAST of EMLSAG00000003219 vs. nr
Match: gi|270006916|gb|EFA03364.1| (hypothetical protein TcasGA2_TC013349 [Tribolium castaneum]) HSP 1 Score: 65.855 bits (159), Expect = 2.617e-10 Identity = 33/98 (33.67%), Postives = 54/98 (55.10%), Query Frame = 0 Query: 13 SKRYDLFEGQWKNKRYNQHRARVESAASVIDVKPPISSSFKHIKVKSKKLQKEEEKHTEVMTNNLILLRHLSEISVTKRIDDGEDKKIHWGDYYEDIL 110 S++ +L W+ +R+ HR +V+SA ID +PP+ +H+ +K KK QKE E+ E+ NN LL+ LS + T R+D+ +W + L Sbjct: 3 SRKENLLVRPWQQRRFENHRKKVQSAGPAIDTRPPLPR--QHVALKLKKRQKEAERCQEIEKNNFTLLKRLSYVMRTSRVDN------YWATPQPNFL 92
BLAST of EMLSAG00000003219 vs. nr
Match: gi|1058207639|gb|JAT07336.1| (hypothetical protein g.5822, partial [Homalodisca liturata]) HSP 1 Score: 65.4698 bits (158), Expect = 3.175e-10 Identity = 34/82 (41.46%), Postives = 50/82 (60.98%), Query Frame = 0 Query: 13 SKRYDLFEGQWKNKRYNQHRARVESAASVIDVKPPISSSFKHIKVKSKKLQKEEEKHTEVMTNNLILLRHLSEISVTKRIDD 94 ++R +L W+ +RY HR +VESA IDV+PP + +H+ K KK QKE E+ + +N LL+HLS I T R+D+ Sbjct: 3 TRRENLLIRPWQERRYINHRNKVESALPAIDVRPP--AQRQHVACKLKKQQKEAERCERIHQDNFTLLQHLSSIMKTNRLDN 82
BLAST of EMLSAG00000003219 vs. nr
Match: gi|242024040|ref|XP_002432438.1| (conserved hypothetical protein [Pediculus humanus corporis] >gi|212517871|gb|EEB19700.1| conserved hypothetical protein [Pediculus humanus corporis]) HSP 1 Score: 65.855 bits (159), Expect = 4.871e-10 Identity = 33/82 (40.24%), Postives = 50/82 (60.98%), Query Frame = 0 Query: 13 SKRYDLFEGQWKNKRYNQHRARVESAASVIDVKPPISSSFKHIKVKSKKLQKEEEKHTEVMTNNLILLRHLSEISVTKRIDD 94 ++R L W+ +RYN H+ ++ +A SVID+ PP H+ +K KKLQKE E+ ++ N ILL+HL I KR+D+ Sbjct: 3 TRREKLLTRPWQLRRYNYHKKKLVNAVSVIDIGPPAERD--HVTIKLKKLQKERERQMKIEDENFILLQHLGSIMSKKRVDN 82
BLAST of EMLSAG00000003219 vs. nr
Match: gi|1041542517|ref|XP_017300614.1| (PREDICTED: uncharacterized protein LOC108252704 [Diaphorina citri]) HSP 1 Score: 63.5438 bits (153), Expect = 5.811e-10 Identity = 41/117 (35.04%), Postives = 61/117 (52.14%), Query Frame = 0 Query: 13 SKRYDLFEGQWKNKRYNQHRARVESAASVIDVKPPISSSFKHIKVKSKKLQKEEEKHTEVMTNNLILLRHLSEISVTKRIDDGEDKKIHWGDYYEDILML-----RQDQIERLKAES 124 S+R +L W+ +RY HR +V+SA IDVK P S H+ +K KK+QKE E+ ++ +N ILL+HL I R+D+ + D+ I M + IE + ES Sbjct: 3 SRRENLLIAPWQRRRYLDHRRKVQSALPAIDVKSP--ESRDHVTLKRKKIQKEYERCKKIEHDNFILLKHLDTIMTKCRVDNTWETPP--PDFLHRIAMFPVKRRKPPTIEAVAPES 115
BLAST of EMLSAG00000003219 vs. nr
Match: gi|646700548|gb|KDR10658.1| (hypothetical protein L798_14335 [Zootermopsis nevadensis]) HSP 1 Score: 64.6994 bits (156), Expect = 7.642e-10 Identity = 34/98 (34.69%), Postives = 53/98 (54.08%), Query Frame = 0 Query: 13 SKRYDLFEGQWKNKRYNQHRARVESAASVIDVKPPISSSFKHIKVKSKKLQKEEEKHTEVMTNNLILLRHLSEISVTKRIDDGEDKKIHWGDYYEDIL 110 ++R L W+ +RYN HR +V+SA IDV+PP + H+ K KK Q+E+E+ T++ N LL+ + I+ T R+D+ HW L Sbjct: 3 TRREKLLILPWQQRRYNHHRRKVQSALPAIDVRPP--PTHGHVCCKLKKQQREQERTTQIEQENYRLLQRMGTITQTSRLDN------HWVTPPPSFL 92 The following BLAST results are available for this feature:
BLAST of EMLSAG00000003219 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000003219 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 2
BLAST of EMLSAG00000003219 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000003219 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000003219 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 3
BLAST of EMLSAG00000003219 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
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BLAST of EMLSAG00000003219 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s177:480974..485043+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000003219-685985 ID=EMLSAG00000003219-685985|Name=EMLSAG00000003219|organism=Lepeophtheirus salmonis|type=gene|length=4070bp|location=Sequence derived from alignment at LSalAtl2s177:480974..485043+ (Lepeophtheirus salmonis)back to top Add to Basket
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