EMLSAG00000003328, EMLSAG00000003328-686094 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000003328
Unique NameEMLSAG00000003328-686094
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000003328 vs. GO
Match: - (symbol:Scp1 "Sarcoplasmic calcium-binding protein 1" species:7227 "Drosophila melanogaster" [GO:0016529 "sarcoplasmic reticulum" evidence=ISS] [GO:0005509 "calcium ion binding" evidence=ISS;NAS] InterPro:IPR002048 InterPro:IPR011992 Pfam:PF13499 PROSITE:PS50222 SMART:SM00054 Prosite:PS00018 GO:GO:0005509 Gene3D:1.10.238.10 InterPro:IPR018247 EMBL:CM000457 FlyBase:FBgn0020908 EMBL:AY118788 RefSeq:NP_001015389.1 RefSeq:NP_001263160.1 UniGene:Dm.4693 SMR:Q8MSI2 DIP:DIP-22377N MINT:MINT-764603 EnsemblMetazoa:FBtr0113713 GeneID:3355102 KEGG:dme:Dmel_CG15848 UCSC:CG15848-RA CTD:3355102 InParanoid:Q8MSI2 OMA:QELYAQF GenomeRNAi:3355102 NextBio:850589 Uniprot:Q8MSI2)

HSP 1 Score: 139.428 bits (350), Expect = 1.654e-40
Identity = 64/116 (55.17%), Postives = 88/116 (75.86%), Query Frame = 0 
Query:    1 MAYSWDNRVKFVVRYMYDIDNNGFLDKNDFECLAVRNTVMETKGKWCADKFKKNQEIMYNLWNEISELADFNKDGEXTTEEFKNAIKKVYMGKSFDELPLGVRSFVSAKFRNLDIN 116
            MAYSWDNRV FVVRYMYDIDNNGFLD+NDF C+AVR  V+E KG     +    +++M NLW+EIS +AD +KDG+ + +EFK+A+KK  +GK ++E P  +R+F+ + F+ LDI+
Sbjct:    1 MAYSWDNRVDFVVRYMYDIDNNGFLDQNDFLCMAVRACVVEGKGDCSTARLDDYKKLMKNLWDEISAIADDDKDGKISNQEFKDAVKKTCVGKKYEEFPQAMRAFIESNFKLLDID 116
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BLAST of EMLSAG00000003328 vs. C. finmarchicus
Match: gi|592891501|gb|GAXK01066874.1| (TSA: Calanus finmarchicus comp4031_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 150.599 bits (379), Expect = 6.723e-44
Identity = 68/117 (58.12%), Postives = 88/117 (75.21%), Query Frame = 0 
Query:    1 MAYSWDNRVKFVVRYMYDIDNNGFLDKNDFECLAVRNTVMETKGKWCADKFKKNQEIMYNLWNEISELADFNKDGEXTTEEFKNAIKKVYMGKSFDELPLGVRSFVSAKFRNLDING 117
            MA SW NRVKF+VRYMYD D NG LD+NDFECLAVRNT+ME KG W   KF+KN+ +M NLW +ISE+ADF+K+GE  TEEF   ++    GK++D LP   + F+ A+FR +D++G
Sbjct:  577 MANSWSNRVKFIVRYMYDYDGNGVLDQNDFECLAVRNTIMEGKGDWDPIKFEKNKTVMINLWQQISEIADFDKNGEVDTEEFMGGVETACKGKAYDALPEAFKFFIEAQFRTIDVDG 927
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BLAST of EMLSAG00000003328 vs. C. finmarchicus
Match: gi|592891500|gb|GAXK01066875.1| (TSA: Calanus finmarchicus comp4031_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 149.443 bits (376), Expect = 7.068e-44
Identity = 67/117 (57.26%), Postives = 87/117 (74.36%), Query Frame = 0 
Query:    1 MAYSWDNRVKFVVRYMYDIDNNGFLDKNDFECLAVRNTVMETKGKWCADKFKKNQEIMYNLWNEISELADFNKDGEXTTEEFKNAIKKVYMGKSFDELPLGVRSFVSAKFRNLDING 117
            MA SW NRVKF+VRYMYD D NG LD+NDFECLAVRNT+ME KG W   KF+KN+ +M NLW +ISE+ADF+K+GE  TEEF   ++    GK++D LP   + F+  +FR +D++G
Sbjct:  438 MANSWSNRVKFIVRYMYDYDGNGVLDQNDFECLAVRNTIMEGKGDWDPIKFEKNKTVMINLWQQISEIADFDKNGEVDTEEFMGGVETACKGKAYDALPEAFKFFIEGQFRTIDVDG 788
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BLAST of EMLSAG00000003328 vs. C. finmarchicus
Match: gi|592891499|gb|GAXK01066876.1| (TSA: Calanus finmarchicus comp4031_c0_seq3 transcribed RNA sequence)

HSP 1 Score: 147.517 bits (371), Expect = 3.073e-43
Identity = 66/120 (55.00%), Postives = 89/120 (74.17%), Query Frame = 0 
Query:    1 MAYSWDNRVKFVVRYMYDIDNNGFLDKNDFECLAVRNTVMETKGKWCADKFKKNQEIMYNLWNEISELADFNKDGEXTTEEFKNAIKKVYMGKSFDELPLGVRSFVSAKFRNLDINGKIS 120
            MA SW NRVKF+VRYMYD DNNG LD+NDFECLAVRNT+ME  G W  +K+ KN+++M NLWN+I+++ADF+K+GE   EEF   ++    GKS+D LP   + F+  +FR +D++G  S
Sbjct:  429 MANSWSNRVKFIVRYMYDYDNNGVLDRNDFECLAVRNTIMEGNGGWDKEKYAKNKDVMINLWNQIADIADFDKNGEVDAEEFMGGVETACKGKSYDGLPEAFKFFIEGQFRTIDVDGDGS 788
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BLAST of EMLSAG00000003328 vs. C. finmarchicus
Match: gi|592768393|gb|GAXK01186175.1| (TSA: Calanus finmarchicus comp45380_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 141.739 bits (356), Expect = 8.880e-40
Identity = 62/117 (52.99%), Postives = 88/117 (75.21%), Query Frame = 0 
Query:    1 MAYSWDNRVKFVVRYMYDIDNNGFLDKNDFECLAVRNTVMETKGKWCADKFKKNQEIMYNLWNEISELADFNKDGEXTTEEFKNAIKKVYMGKSFDELPLGVRSFVSAKFRNLDING 117
            MA SWDNR+KF+VRYMYD+DNNG+L+KNDF+CLAV+ T+ME KG+W    F +   IM +LW++I+++AD NKDG  T EEF+ A+K V + K +D+LP   + F++A F  +D +G
Sbjct:  915 MANSWDNRIKFLVRYMYDLDNNGYLNKNDFDCLAVKFTIMEGKGEWNKKSFTRYTMIMSDLWDQIADVADLNKDGAVTVEEFQTAVKSVCLEKEYDDLPSAFKQFITAMFNTIDTDG 1265
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BLAST of EMLSAG00000003328 vs. C. finmarchicus
Match: gi|592768394|gb|GAXK01186174.1| (TSA: Calanus finmarchicus comp45380_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 141.739 bits (356), Expect = 9.804e-40
Identity = 62/117 (52.99%), Postives = 88/117 (75.21%), Query Frame = 0 
Query:    1 MAYSWDNRVKFVVRYMYDIDNNGFLDKNDFECLAVRNTVMETKGKWCADKFKKNQEIMYNLWNEISELADFNKDGEXTTEEFKNAIKKVYMGKSFDELPLGVRSFVSAKFRNLDING 117
            MA SWDNR+KF+VRYMYD+DNNG+L+KNDF+CLAV+ T+ME KG+W    F +   IM +LW++I+++AD NKDG  T EEF+ A+K V + K +D+LP   + F++A F  +D +G
Sbjct:  940 MANSWDNRIKFLVRYMYDLDNNGYLNKNDFDCLAVKFTIMEGKGEWNKKSFTRYTMIMSDLWDQIADVADLNKDGAVTVEEFQTAVKSVCLEKEYDDLPSAFKQFITAMFNTIDTDG 1290
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BLAST of EMLSAG00000003328 vs. C. finmarchicus
Match: gi|592957575|gb|GAXK01000981.1| (TSA: Calanus finmarchicus comp638998_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 39.2762 bits (90), Expect = 1.333e-3
Identity = 22/76 (28.95%), Postives = 43/76 (56.58%), Query Frame = 0 
Query:    7 NRVKFVVRYMYDIDNNGFLDKNDFECLAVRNTVMETKG-KWCADKFKKNQEIMYNLWNEISELADFNKDGEXTTEE 81
            N++ F     +D++++GFL   DF  L  ++ + +  G K   +K+KK + +  N+W  + ++AD + DG+ T  E
Sbjct:  322 NKLTFDFNTFFDLNHDGFLSYKDF--LWAKDRICQMSGWKMNCEKYKKTEVLFTNIWTSLVDVADTDHDGKITIIE 543
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BLAST of EMLSAG00000003328 vs. C. finmarchicus
Match: gi|592904551|gb|GAXK01053824.1| (TSA: Calanus finmarchicus comp259349_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 34.6538 bits (78), Expect = 3.551e-2
Identity = 24/68 (35.29%), Postives = 35/68 (51.47%), Query Frame = 0 
Query:   16 MYDIDNNGFLDKNDFECLAVRNTVMETKGKWCADKFKKNQEIMYNLWNEISELADFNKDGEXTTEEFK 83
            M+D DNNGF+D ++       +T+ME  G          Q +  N   E+   AD NKDG+ + +EFK
Sbjct:  346 MFDADNNGFIDVDEL------STIMEKLG----------QTLNINQLKEMIMSADMNKDGKISFDEFK 501
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BLAST of EMLSAG00000003328 vs. C. finmarchicus
Match: gi|592831073|gb|GAXK01126471.1| (TSA: Calanus finmarchicus comp47460_c1_seq20 transcribed RNA sequence)

HSP 1 Score: 32.3426 bits (72), Expect = 3.076e-1
Identity = 17/45 (37.78%), Postives = 24/45 (53.33%), Query Frame = 0 
Query:   55 QEIMYNLWNEISELADFNKDGEXTTEEFKNAIKKVYMGKSFDELP 99
            Q+ +  +WN    LAD +KDG+   EEF  A+    MG   + LP
Sbjct:  821 QQTLATVWN----LADIDKDGKLNVEEFILAMHLCEMGMKGEPLP 943
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BLAST of EMLSAG00000003328 vs. C. finmarchicus
Match: gi|592831074|gb|GAXK01126470.1| (TSA: Calanus finmarchicus comp47460_c1_seq19 transcribed RNA sequence)

HSP 1 Score: 32.3426 bits (72), Expect = 3.078e-1
Identity = 17/45 (37.78%), Postives = 24/45 (53.33%), Query Frame = 0 
Query:   55 QEIMYNLWNEISELADFNKDGEXTTEEFKNAIKKVYMGKSFDELP 99
            Q+ +  +WN    LAD +KDG+   EEF  A+    MG   + LP
Sbjct:  821 QQTLATVWN----LADIDKDGKLNVEEFILAMHLCEMGMKGEPLP 943
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BLAST of EMLSAG00000003328 vs. C. finmarchicus
Match: gi|592831075|gb|GAXK01126469.1| (TSA: Calanus finmarchicus comp47460_c1_seq18 transcribed RNA sequence)

HSP 1 Score: 32.3426 bits (72), Expect = 3.079e-1
Identity = 17/45 (37.78%), Postives = 24/45 (53.33%), Query Frame = 0 
Query:   55 QEIMYNLWNEISELADFNKDGEXTTEEFKNAIKKVYMGKSFDELP 99
            Q+ +  +WN    LAD +KDG+   EEF  A+    MG   + LP
Sbjct:  821 QQTLATVWN----LADIDKDGKLNVEEFILAMHLCEMGMKGEPLP 943
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BLAST of EMLSAG00000003328 vs. L. salmonis peptides
Match: EMLSAP00000003328 (pep:novel supercontig:LSalAtl2s:LSalAtl2s182:497236:498488:1 gene:EMLSAG00000003328 transcript:EMLSAT00000003328 description:"augustus_masked-LSalAtl2s182-processed-gene-5.11")

HSP 1 Score: 251.136 bits (640), Expect = 8.393e-87
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0 
Query:    1 MAYSWDNRVKFVVRYMYDIDNNGFLDKNDFECLAVRNTVMETKGKWCADKFKKNQEIMYNLWNEISELADFNKDGEXTTEEFKNAIKKVYMGKSFDELPLGVRSFVSAKFRNLDINGKISDHW 123
            MAYSWDNRVKFVVRYMYDIDNNGFLDKNDFECLAVRNTVMETKGKWCADKFKKNQEIMYNLWNEISELADFNKDGEXTTEEFKNAIKKVYMGKSFDELPLGVRSFVSAKFRNLDINGKISDHW
Sbjct:    1 MAYSWDNRVKFVVRYMYDIDNNGFLDKNDFECLAVRNTVMETKGKWCADKFKKNQEIMYNLWNEISELADFNKDGEXTTEEFKNAIKKVYMGKSFDELPLGVRSFVSAKFRNLDINGKISDHW 123
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BLAST of EMLSAG00000003328 vs. SwissProt
Match: gi|134309|sp|P05946.1|SCP1_ASTLP (RecName: Full=Sarcoplasmic calcium-binding protein 1; AltName: Full=Sarcoplasmic calcium-binding protein I; Short=SCP I)

HSP 1 Score: 160.999 bits (406), Expect = 2.628e-50
Identity = 72/116 (62.07%), Postives = 94/116 (81.03%), Query Frame = 0 
Query:    2 AYSWDNRVKFVVRYMYDIDNNGFLDKNDFECLAVRNTVMETKGKWCADKFKKNQEIMYNLWNEISELADFNKDGEXTTEEFKNAIKKVYMGKSFDELPLGVRSFVSAKFRNLDING 117
            AYSWDNRVK+VVRYMYDIDNNGFLDKNDFECLA+RNT++E +G++    +  NQ+IM NLWNEI+ELADFNKDGE T +EFK A++ V +GK+F   P   + F++ +F+ +D+NG
Sbjct:    1 AYSWDNRVKYVVRYMYDIDNNGFLDKNDFECLALRNTLIEGRGEFNEAAYANNQKIMSNLWNEIAELADFNKDGEVTIDEFKKAVQNVCVGKAFATFPAAFKVFIANQFKTVDVNG 116
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BLAST of EMLSAG00000003328 vs. SwissProt
Match: gi|134312|sp|P02636.1|SCPA_PENSP (RecName: Full=Sarcoplasmic calcium-binding protein, alpha-B and -A chains; Short=SCP alpha chain)

HSP 1 Score: 158.688 bits (400), Expect = 1.896e-49
Identity = 72/116 (62.07%), Postives = 94/116 (81.03%), Query Frame = 0 
Query:    2 AYSWDNRVKFVVRYMYDIDNNGFLDKNDFECLAVRNTVMETKGKWCADKFKKNQEIMYNLWNEISELADFNKDGEXTTEEFKNAIKKVYMGKSFDELPLGVRSFVSAKFRNLDING 117
            AYSWDNRVK+VVRYMYDID++GFLDKNDFECLAVRNT++E +G++ A  +  NQ+IM NLWNEI+ELADFNKDGE T +EFK A++K   GK + E P   + F++ +F+ +D+NG
Sbjct:    1 AYSWDNRVKYVVRYMYDIDDDGFLDKNDFECLAVRNTLIEGRGEFSAADYANNQKIMRNLWNEIAELADFNKDGEVTVDEFKMAVQKHCQGKKYSEFPGAFKVFIANQFKAIDVNG 116
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BLAST of EMLSAG00000003328 vs. SwissProt
Match: gi|134315|sp|P02635.1|SCPB_PENSP (RecName: Full=Sarcoplasmic calcium-binding protein, beta chain; Short=SCP beta chain)

HSP 1 Score: 155.221 bits (391), Expect = 5.291e-48
Identity = 70/116 (60.34%), Postives = 93/116 (80.17%), Query Frame = 0 
Query:    2 AYSWDNRVKFVVRYMYDIDNNGFLDKNDFECLAVRNTVMETKGKWCADKFKKNQEIMYNLWNEISELADFNKDGEXTTEEFKNAIKKVYMGKSFDELPLGVRSFVSAKFRNLDING 117
            AYSWDNRVK++VRYMYDIDN+GFLDKNDFECLAVR T++E +G++  + + KN+EIM NLWNEI+ELADFNKDGE T +EFK A++K   GK+F   P   + F+  +F+ +D++G
Sbjct:    1 AYSWDNRVKYIVRYMYDIDNDGFLDKNDFECLAVRVTLIEGRGEFSPEGYAKNKEIMANLWNEIAELADFNKDGEVTVDEFKQAVQKNCKGKAFANFPNAFKVFIGNQFKTIDVDG 116
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BLAST of EMLSAG00000003328 vs. Select Arthropod Genomes
Match: gb|EFA11861.1| (Sarcoplasmic calcium-binding protein 1-like Protein [Tribolium castaneum])

HSP 1 Score: 143.665 bits (361), Expect = 8.772e-44
Identity = 61/116 (52.59%), Postives = 90/116 (77.59%), Query Frame = 0 
Query:    1 MAYSWDNRVKFVVRYMYDIDNNGFLDKNDFECLAVRNTVMETKGKWCADKFKKNQEIMYNLWNEISELADFNKDGEXTTEEFKNAIKKVYMGKSFDELPLGVRSFVSAKFRNLDIN 116
            MAYSWDNRV FVV+Y+YD DNNG+LD+ DF CLA+R T++E KG++   + ++ Q IM +LW EI+ELADFNKDG+ TTEEFK A+++  MG+ +++ P  ++ F+ + F+ +D+N
Sbjct:    1 MAYSWDNRVSFVVKYLYDTDNNGYLDERDFACLALRATIIEGKGEFSFSRLQEYQHIMLSLWEEIAELADFNKDGKITTEEFKQAVQQCCMGRRYEDFPQAMKMFIDSNFKMVDLN 116
[Close]
BLAST of EMLSAG00000003328 vs. Select Arthropod Genomes
Match: EAA12855.3 (AGAP007963-PA [Anopheles gambiae str. PEST])

HSP 1 Score: 140.198 bits (352), Expect = 1.610e-42
Identity = 62/116 (53.45%), Postives = 90/116 (77.59%), Query Frame = 0 
Query:    1 MAYSWDNRVKFVVRYMYDIDNNGFLDKNDFECLAVRNTVMETKGKWCADKFKKNQEIMYNLWNEISELADFNKDGEXTTEEFKNAIKKVYMGKSFDELPLGVRSFVSAKFRNLDIN 116
            M+YSWD RV+F+VR+MYDIDNNGFLD NDF+C+A+R TV+E KG+    +  + + IM +LW+EIS LADF+KDG+ TT+EFK A+K+  +GK + E P  +++F+ A ++ +DIN
Sbjct:    1 MSYSWDQRVEFIVRHMYDIDNNGFLDNNDFQCMALRATVIEGKGEINPARLNEYKFIMKSLWDEISALADFDKDGKITTDEFKQAVKQTCVGKPYSEFPKAMKAFIDAHYKMMDIN 116
[Close]
BLAST of EMLSAG00000003328 vs. Select Arthropod Genomes
Match: ELP57405.1 (sarcoplasmic calcium-binding protein 1, isoform B [Drosophila melanogaster])

HSP 1 Score: 139.428 bits (350), Expect = 3.672e-42
Identity = 64/116 (55.17%), Postives = 88/116 (75.86%), Query Frame = 0 
Query:    1 MAYSWDNRVKFVVRYMYDIDNNGFLDKNDFECLAVRNTVMETKGKWCADKFKKNQEIMYNLWNEISELADFNKDGEXTTEEFKNAIKKVYMGKSFDELPLGVRSFVSAKFRNLDIN 116
            MAYSWDNRV FVVRYMYDIDNNGFLD+NDF C+AVR  V+E KG     +    +++M NLW+EIS +AD +KDG+ + +EFK+A+KK  +GK ++E P  +R+F+ + F+ LDI+
Sbjct:    1 MAYSWDNRVDFVVRYMYDIDNNGFLDQNDFLCMAVRACVVEGKGDCSTARLDDYKKLMKNLWDEISAIADDDKDGKISNQEFKDAVKKTCVGKKYEEFPQAMRAFIESNFKLLDID 116
[Close]
BLAST of EMLSAG00000003328 vs. Select Arthropod Genomes
Match: EAA46049.1 (sarcoplasmic calcium-binding protein 1, isoform A [Drosophila melanogaster])

HSP 1 Score: 139.428 bits (350), Expect = 3.672e-42
Identity = 64/116 (55.17%), Postives = 88/116 (75.86%), Query Frame = 0 
Query:    1 MAYSWDNRVKFVVRYMYDIDNNGFLDKNDFECLAVRNTVMETKGKWCADKFKKNQEIMYNLWNEISELADFNKDGEXTTEEFKNAIKKVYMGKSFDELPLGVRSFVSAKFRNLDIN 116
            MAYSWDNRV FVVRYMYDIDNNGFLD+NDF C+AVR  V+E KG     +    +++M NLW+EIS +AD +KDG+ + +EFK+A+KK  +GK ++E P  +R+F+ + F+ LDI+
Sbjct:    1 MAYSWDNRVDFVVRYMYDIDNNGFLDQNDFLCMAVRACVVEGKGDCSTARLDDYKKLMKNLWDEISAIADDDKDGKISNQEFKDAVKKTCVGKKYEEFPQAMRAFIESNFKLLDID 116
[Close]
BLAST of EMLSAG00000003328 vs. Select Arthropod Genomes
Match: XP_006570446.1 (PREDICTED: sarcoplasmic calcium-binding protein 1 isoform X1 [Apis mellifera])

HSP 1 Score: 134.035 bits (336), Expect = 1.034e-39
Identity = 56/117 (47.86%), Postives = 89/117 (76.07%), Query Frame = 0 
Query:    1 MAYSWDNRVKFVVRYMYDIDNNGFLDKNDFECLAVRNTVMETKGKWCADKFKKNQEIMYNLWNEISELADFNKDGEXTTEEFKNAIKKVYMGKSFDELPLGVRSFVSAKFRNLDING 117
            MAYSWDNRV F+VR++YD DNNG L+K+DFEC+A++ T++E KG++  +++++   IM +LW EI+ELADFNKD   T EEFK A+++  +G+ + + P  ++ F+ + F+ +D+NG
Sbjct:    1 MAYSWDNRVDFIVRFLYDTDNNGILEKHDFECMALKMTLIEGKGEFSYNRYQETLHIMLSLWEEIAELADFNKDDIVTIEEFKEAVQRSCVGREYQDFPQAMKMFIDSHFKIVDLNG 117
[Close]
BLAST of EMLSAG00000003328 vs. Select Arthropod Genomes
Match: XP_623244.1 (PREDICTED: sarcoplasmic calcium-binding protein 1 isoform X2 [Apis mellifera])

HSP 1 Score: 131.339 bits (329), Expect = 5.798e-39
Identity = 55/116 (47.41%), Postives = 88/116 (75.86%), Query Frame = 0 
Query:    1 MAYSWDNRVKFVVRYMYDIDNNGFLDKNDFECLAVRNTVMETKGKWCADKFKKNQEIMYNLWNEISELADFNKDGEXTTEEFKNAIKKVYMGKSFDELPLGVRSFVSAKFRNLDIN 116
            MAYSWDNRV F+VR++YD DNNG L+K+DFEC+A++ T++E KG++  +++++   IM +LW EI+ELADFNKD   T EEFK A+++  +G+ + + P  ++ F+ + F+ +D+N
Sbjct:    1 MAYSWDNRVDFIVRFLYDTDNNGILEKHDFECMALKMTLIEGKGEFSYNRYQETLHIMLSLWEEIAELADFNKDDIVTIEEFKEAVQRSCVGREYQDFPQAMKMFIDSHFKIVDLN 116
[Close]
BLAST of EMLSAG00000003328 vs. Select Arthropod Genomes
Match: gb|KFM61398.1| (Sarcoplasmic calcium-binding protein 1, partial [Stegodyphus mimosarum])

HSP 1 Score: 119.398 bits (298), Expect = 1.871e-34
Identity = 51/102 (50.00%), Postives = 76/102 (74.51%), Query Frame = 0 
Query:   16 MYDIDNNGFLDKNDFECLAVRNTVMETKGKWCADKFKKNQEIMYNLWNEISELADFNKDGEXTTEEFKNAIKKVYMGKSFDELPLGVRSFVSAKFRNLDING 117
            MYD DNNG+LD NDFECLA++ T+ E KG + A+  + N+++M++LW+E++ELAD+NKDG+ T EEFK  ++ V MGK F++ P  ++  ++ KF   DING
Sbjct:    1 MYDTDNNGYLDVNDFECLALKYTIFEGKGAYNAELHESNKKVMHDLWSEMAELADYNKDGQVTVEEFKQGVQSVCMGKKFEQFPQSLKHAINCKFHATDING 102
[Close]
BLAST of EMLSAG00000003328 vs. Select Arthropod Genomes
Match: gb|EEC18172.1| (hypothetical protein IscW_ISCW014255 [Ixodes scapularis])

HSP 1 Score: 70.0922 bits (170), Expect = 2.862e-15
Identity = 29/63 (46.03%), Postives = 44/63 (69.84%), Query Frame = 0 
Query:   58 MYNLWNEISELADFNKDGEXTTEEFKNAIKKVYMGKSFDELPLGVRSFVSAKFRNLDINGKIS 120
            M  LWNEI++LADFNKDG  T EEFK A++ + +GK+F++ P  ++  ++ K+   D NG I+
Sbjct:    1 MLGLWNEIADLADFNKDGHVTVEEFKQAVQNLCVGKTFEQFPQPLKHAINCKYATADANGTIT 63
[Close]
BLAST of EMLSAG00000003328 vs. nr
Match: gi|225711822|gb|ACO11757.1| (Sarcoplasmic calcium-binding protein, beta chain [Lepeophtheirus salmonis] >gi|225713964|gb|ACO12828.1| Sarcoplasmic calcium-binding protein, beta chain [Lepeophtheirus salmonis])

HSP 1 Score: 189.119 bits (479), Expect = 4.984e-59
Identity = 91/117 (77.78%), Postives = 102/117 (87.18%), Query Frame = 0 
Query:    1 MAYSWDNRVKFVVRYMYDIDNNGFLDKNDFECLAVRNTVMETKGKWCADKFKKNQEIMYNLWNEISELADFNKDGEXTTEEFKNAIKKVYMGKSFDELPLGVRSFVSAKFRNLDING 117
            MAYSWDNRVKFVVRYMYDIDNNGFLDKNDFECLAVRNTVMETKGKWCADKFKKNQEIMYNLWNEISELADFNKDGE + +EFK  + +V  GKSF +LP   + F+ + FR +D++G
Sbjct:    1 MAYSWDNRVKFVVRYMYDIDNNGFLDKNDFECLAVRNTVMETKGKWCADKFKKNQEIMYNLWNEISELADFNKDGEVSVDEFKRGL-EVCKGKSFSDLPKPFKFFIDSCFRTIDVDG 116
[Close]
BLAST of EMLSAG00000003328 vs. nr
Match: gi|290462373|gb|ADD24234.1| (Sarcoplasmic calcium-binding protein, beta chain [Lepeophtheirus salmonis])

HSP 1 Score: 186.808 bits (473), Expect = 4.395e-58
Identity = 90/117 (76.92%), Postives = 101/117 (86.32%), Query Frame = 0 
Query:    1 MAYSWDNRVKFVVRYMYDIDNNGFLDKNDFECLAVRNTVMETKGKWCADKFKKNQEIMYNLWNEISELADFNKDGEXTTEEFKNAIKKVYMGKSFDELPLGVRSFVSAKFRNLDING 117
            MAYSWDNRVKFVVRYMYDI NNGFLDKNDFECLAVRNTVMETKGKWCADKFKKNQEIMYNLWNEISELADFNKDGE + +EFK  + +V  GKSF +LP   + F+ + FR +D++G
Sbjct:    1 MAYSWDNRVKFVVRYMYDIGNNGFLDKNDFECLAVRNTVMETKGKWCADKFKKNQEIMYNLWNEISELADFNKDGEVSVDEFKRGL-EVCKGKSFSDLPKPFKFFIDSCFRTIDVDG 116
[Close]
BLAST of EMLSAG00000003328 vs. nr
Match: gi|225710666|gb|ACO11179.1| (Sarcoplasmic calcium-binding protein, beta chain [Caligus rogercresseyi])

HSP 1 Score: 185.652 bits (470), Expect = 1.270e-57
Identity = 88/117 (75.21%), Postives = 100/117 (85.47%), Query Frame = 0 
Query:    1 MAYSWDNRVKFVVRYMYDIDNNGFLDKNDFECLAVRNTVMETKGKWCADKFKKNQEIMYNLWNEISELADFNKDGEXTTEEFKNAIKKVYMGKSFDELPLGVRSFVSAKFRNLDING 117
            MAYSWDNRVKFVVRYMYDIDNNGFLDKNDFECLAVRNTVMETKGKWCADKFKKNQE+M NLW EISELADFNKDGE + +EFK  + +V  GK+F ELP   + F+ + FR +D++G
Sbjct:    1 MAYSWDNRVKFVVRYMYDIDNNGFLDKNDFECLAVRNTVMETKGKWCADKFKKNQEVMSNLWTEISELADFNKDGEVSVDEFKRGL-EVCKGKTFAELPTAFKFFIDSCFRTIDVDG 116
[Close]
BLAST of EMLSAG00000003328 vs. nr
Match: gi|225709300|gb|ACO10496.1| (Sarcoplasmic calcium-binding protein, beta chain [Caligus rogercresseyi])

HSP 1 Score: 185.267 bits (469), Expect = 1.401e-57
Identity = 88/117 (75.21%), Postives = 100/117 (85.47%), Query Frame = 0 
Query:    1 MAYSWDNRVKFVVRYMYDIDNNGFLDKNDFECLAVRNTVMETKGKWCADKFKKNQEIMYNLWNEISELADFNKDGEXTTEEFKNAIKKVYMGKSFDELPLGVRSFVSAKFRNLDING 117
            MAYSWDNRVKFVVRYMYDIDNNGFLDKNDFECLAVRNTVMETKGKWCADKFKKNQE+M NLW EISELADFNKDGE + +EFK  + +V  GK+F ELP   + F+ + FR +D++G
Sbjct:    1 MAYSWDNRVKFVVRYMYDIDNNGFLDKNDFECLAVRNTVMETKGKWCADKFKKNQEVMSNLWTEISELADFNKDGEVSVDEFKRGL-EVCKGKTFAELPTAFKFFIDSCFRTIDVDG 116
[Close]
BLAST of EMLSAG00000003328 vs. nr
Match: gi|225713750|gb|ACO12721.1| (Sarcoplasmic calcium-binding protein, beta chain [Lepeophtheirus salmonis])

HSP 1 Score: 183.726 bits (465), Expect = 6.408e-57
Identity = 89/117 (76.07%), Postives = 101/117 (86.32%), Query Frame = 0 
Query:    1 MAYSWDNRVKFVVRYMYDIDNNGFLDKNDFECLAVRNTVMETKGKWCADKFKKNQEIMYNLWNEISELADFNKDGEXTTEEFKNAIKKVYMGKSFDELPLGVRSFVSAKFRNLDING 117
            MAYSWDNRVKFVVRYMYDIDNNGFLDKNDFECLAVRNTVMETKGK CADKFKKNQEIMYNLWNEISELADF+KDGE + +EFK  + +V  GKSF +LP   + F+ + FR +D++G
Sbjct:    1 MAYSWDNRVKFVVRYMYDIDNNGFLDKNDFECLAVRNTVMETKGKRCADKFKKNQEIMYNLWNEISELADFSKDGEVSVDEFKRGL-EVCKGKSFSDLPKPFKFFIDSCFRTIDVDG 116
[Close]
BLAST of EMLSAG00000003328 vs. nr
Match: gi|238477327|gb|ACR43475.1| (sarcoplasmic calcium-binding protein [Crangon crangon])

HSP 1 Score: 171.785 bits (434), Expect = 3.309e-52
Identity = 76/117 (64.96%), Postives = 98/117 (83.76%), Query Frame = 0 
Query:    1 MAYSWDNRVKFVVRYMYDIDNNGFLDKNDFECLAVRNTVMETKGKWCADKFKKNQEIMYNLWNEISELADFNKDGEXTTEEFKNAIKKVYMGKSFDELPLGVRSFVSAKFRNLDING 117
            MAY+WDNRVK+VVRYMYDIDNNGFLDKNDFECLAV+NT++E +G+W A+K+  NQ+IM NLWNEI+ELADFNKDGE T EEFK A++K   GK F + P   ++F++ +F+ +D+NG
Sbjct:    1 MAYTWDNRVKYVVRYMYDIDNNGFLDKNDFECLAVKNTLIECRGEWSAEKYAANQKIMSNLWNEIAELADFNKDGEVTVEEFKQAVQKHCNGKPFGDFPSAFKTFIANQFKTIDVNG 117
[Close]
BLAST of EMLSAG00000003328 vs. nr
Match: gi|380503696|dbj|BAL72725.1| (sarcoplasmic calcium-binding protein [Penaeus monodon])

HSP 1 Score: 168.318 bits (425), Expect = 8.216e-51
Identity = 76/117 (64.96%), Postives = 96/117 (82.05%), Query Frame = 0 
Query:    1 MAYSWDNRVKFVVRYMYDIDNNGFLDKNDFECLAVRNTVMETKGKWCADKFKKNQEIMYNLWNEISELADFNKDGEXTTEEFKNAIKKVYMGKSFDELPLGVRSFVSAKFRNLDING 117
            MAYSWDNRVK+VVRYMYDIDNNGFLDKNDFECLAVRNT++E +G++ AD +  NQ+IM NLWNEI+ELADFNKDGE T +EFK A++K   GK + E P   + F++ +F+ +D+NG
Sbjct:    1 MAYSWDNRVKYVVRYMYDIDNNGFLDKNDFECLAVRNTLIEGRGEFSADAYANNQKIMRNLWNEIAELADFNKDGEVTVDEFKQAVQKHCQGKKYGEFPGAFKVFIANQFKAIDVNG 117
[Close]
BLAST of EMLSAG00000003328 vs. nr
Match: gi|223403273|gb|ACM89179.1| (sarcoplasmic calcium-binding protein [Litopenaeus vannamei] >gi|317383198|gb|ADV17343.1| sarcoplasmic calcium binding protein [Penaeus monodon])

HSP 1 Score: 166.777 bits (421), Expect = 3.629e-50
Identity = 75/117 (64.10%), Postives = 96/117 (82.05%), Query Frame = 0 
Query:    1 MAYSWDNRVKFVVRYMYDIDNNGFLDKNDFECLAVRNTVMETKGKWCADKFKKNQEIMYNLWNEISELADFNKDGEXTTEEFKNAIKKVYMGKSFDELPLGVRSFVSAKFRNLDING 117
            MAYSWDNRVK+VVRYMYDIDNNGFLDKNDFECLAVRNT++E +G++ AD +  NQ+IM NLWNEI+ELADFNKDGE T +EFK A++K   GK + + P   + F++ +F+ +D+NG
Sbjct:    1 MAYSWDNRVKYVVRYMYDIDNNGFLDKNDFECLAVRNTLIEGRGEFSADAYANNQKIMRNLWNEIAELADFNKDGEVTVDEFKQAVQKHCQGKKYGDFPGAFKVFIANQFKAIDVNG 117
[Close]
BLAST of EMLSAG00000003328 vs. nr
Match: gi|751813228|gb|AJG01361.1| (sarcoplasmic calcium-binding protein variant c [Eriocheir sinensis])

HSP 1 Score: 166.392 bits (420), Expect = 5.618e-50
Identity = 73/117 (62.39%), Postives = 98/117 (83.76%), Query Frame = 0 
Query:    1 MAYSWDNRVKFVVRYMYDIDNNGFLDKNDFECLAVRNTVMETKGKWCADKFKKNQEIMYNLWNEISELADFNKDGEXTTEEFKNAIKKVYMGKSFDELPLGVRSFVSAKFRNLDING 117
            MAYSWDNRVK+VVRYMYDIDNNG+LDKNDFECLA+RNT++E +G++  + +  NQ+IM NLWNEI+ELADFNKDGE + +EFK A++ V +GK FD  P+  +SF++ +F+ +D+NG
Sbjct:    1 MAYSWDNRVKYVVRYMYDIDNNGYLDKNDFECLALRNTLIEGRGEFKDEAYATNQKIMNNLWNEIAELADFNKDGEVSIDEFKQAVQNVCVGKGFDSFPVAFKSFIANQFKTIDVNG 117
[Close]
BLAST of EMLSAG00000003328 vs. nr
Match: gi|1067072862|ref|XP_018019895.1| (PREDICTED: sarcoplasmic calcium-binding protein 1-like isoform X1 [Hyalella azteca])

HSP 1 Score: 165.236 bits (417), Expect = 1.317e-49
Identity = 76/117 (64.96%), Postives = 96/117 (82.05%), Query Frame = 0 
Query:    1 MAYSWDNRVKFVVRYMYDIDNNGFLDKNDFECLAVRNTVMETKGKWCADKFKKNQEIMYNLWNEISELADFNKDGEXTTEEFKNAIKKVYMGKSFDELPLGVRSFVSAKFRNLDING 117
            MAYSWDNRVKFVVRYMYDIDNNG+LDKNDFECLA+RNT++E +G W    +  NQ+IM +LWNEI+ELADFNKDG+ T +EFK AI+K   GKS+ ELP   ++F+S+ F+ +D+NG
Sbjct:    1 MAYSWDNRVKFVVRYMYDIDNNGYLDKNDFECLALRNTLIEGRGNWDDKAYAGNQKIMSDLWNEIAELADFNKDGQVTVDEFKQAIQKHCNGKSWAELPRAFKTFISSTFKTIDVNG 117
The following BLAST results are available for this feature:
BLAST of EMLSAG00000003328 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 1
Match NameE-valueIdentityDescription
-1.654e-4055.17symbol:Scp1 "Sarcoplasmic calcium-binding protein ... [more]
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BLAST of EMLSAG00000003328 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25
Match NameE-valueIdentityDescription
gi|592891501|gb|GAXK01066874.1|6.723e-4458.12TSA: Calanus finmarchicus comp4031_c0_seq1 transcr... [more]
gi|592891500|gb|GAXK01066875.1|7.068e-4457.26TSA: Calanus finmarchicus comp4031_c0_seq2 transcr... [more]
gi|592891499|gb|GAXK01066876.1|3.073e-4355.00TSA: Calanus finmarchicus comp4031_c0_seq3 transcr... [more]
gi|592768393|gb|GAXK01186175.1|8.880e-4052.99TSA: Calanus finmarchicus comp45380_c0_seq2 transc... [more]
gi|592768394|gb|GAXK01186174.1|9.804e-4052.99TSA: Calanus finmarchicus comp45380_c0_seq1 transc... [more]
gi|592957575|gb|GAXK01000981.1|1.333e-328.95TSA: Calanus finmarchicus comp638998_c0_seq1 trans... [more]
gi|592904551|gb|GAXK01053824.1|3.551e-235.29TSA: Calanus finmarchicus comp259349_c0_seq1 trans... [more]
gi|592831073|gb|GAXK01126471.1|3.076e-137.78TSA: Calanus finmarchicus comp47460_c1_seq20 trans... [more]
gi|592831074|gb|GAXK01126470.1|3.078e-137.78TSA: Calanus finmarchicus comp47460_c1_seq19 trans... [more]
gi|592831075|gb|GAXK01126469.1|3.079e-137.78TSA: Calanus finmarchicus comp47460_c1_seq18 trans... [more]

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BLAST of EMLSAG00000003328 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000033288.393e-87100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s182:49723... [more]
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BLAST of EMLSAG00000003328 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
gi|134309|sp|P05946.1|SCP1_ASTLP2.628e-5062.07RecName: Full=Sarcoplasmic calcium-binding protein... [more]
gi|134312|sp|P02636.1|SCPA_PENSP1.896e-4962.07RecName: Full=Sarcoplasmic calcium-binding protein... [more]
gi|134315|sp|P02635.1|SCPB_PENSP5.291e-4860.34RecName: Full=Sarcoplasmic calcium-binding protein... [more]
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BLAST of EMLSAG00000003328 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 8
Match NameE-valueIdentityDescription
gb|EFA11861.1|8.772e-4452.59Sarcoplasmic calcium-binding protein 1-like Protei... [more]
EAA12855.31.610e-4253.45AGAP007963-PA [Anopheles gambiae str. PEST][more]
ELP57405.13.672e-4255.17sarcoplasmic calcium-binding protein 1, isoform B ... [more]
EAA46049.13.672e-4255.17sarcoplasmic calcium-binding protein 1, isoform A ... [more]
XP_006570446.11.034e-3947.86PREDICTED: sarcoplasmic calcium-binding protein 1 ... [more]
XP_623244.15.798e-3947.41PREDICTED: sarcoplasmic calcium-binding protein 1 ... [more]
gb|KFM61398.1|1.871e-3450.00Sarcoplasmic calcium-binding protein 1, partial [S... [more]
gb|EEC18172.1|2.862e-1546.03hypothetical protein IscW_ISCW014255 [Ixodes scapu... [more]
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BLAST of EMLSAG00000003328 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25
Match NameE-valueIdentityDescription
gi|225711822|gb|ACO11757.1|4.984e-5977.78Sarcoplasmic calcium-binding protein, beta chain [... [more]
gi|290462373|gb|ADD24234.1|4.395e-5876.92Sarcoplasmic calcium-binding protein, beta chain [... [more]
gi|225710666|gb|ACO11179.1|1.270e-5775.21Sarcoplasmic calcium-binding protein, beta chain [... [more]
gi|225709300|gb|ACO10496.1|1.401e-5775.21Sarcoplasmic calcium-binding protein, beta chain [... [more]
gi|225713750|gb|ACO12721.1|6.408e-5776.07Sarcoplasmic calcium-binding protein, beta chain [... [more]
gi|238477327|gb|ACR43475.1|3.309e-5264.96sarcoplasmic calcium-binding protein [Crangon cran... [more]
gi|380503696|dbj|BAL72725.1|8.216e-5164.96sarcoplasmic calcium-binding protein [Penaeus mono... [more]
gi|223403273|gb|ACM89179.1|3.629e-5064.10sarcoplasmic calcium-binding protein [Litopenaeus ... [more]
gi|751813228|gb|AJG01361.1|5.618e-5062.39sarcoplasmic calcium-binding protein variant c [Er... [more]
gi|1067072862|ref|XP_018019895.1|1.317e-4964.96PREDICTED: sarcoplasmic calcium-binding protein 1-... [more]

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BLAST of EMLSAG00000003328 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s182supercontigLSalAtl2s182:497236..498488 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionaugustus_masked-LSalAtl2s182-processed-gene-5.11
Biotypeprotein_coding
EvidenceIEA
NoteSarcoplasmic calcium-binding protein 1
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000003328 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000003328EMLSAT00000003328-699175Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s182:497236..498488+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000003328-686094 ID=EMLSAG00000003328-686094|Name=EMLSAG00000003328|organism=Lepeophtheirus salmonis|type=gene|length=1253bp|location=Sequence derived from alignment at LSalAtl2s182:497236..498488+ (Lepeophtheirus salmonis)
TTTCGAAACACCAATCCCCCCTACTATAAAACCACTATTCAGACTCAACT
TTTTTCTCACTGTATTCAAAAAGTTTGAACCTGTTGGTGATTATTAGTTG
TTTAAAAAAAATTCTTTTTTTTTCTGTTTTGAAAAGAAAATCTTCATAAT
CTCAAAAGGTGAGCTATTTATTTATTTCATATATTCCCTATAAAGCATCA
TCAATCTAAGAGAATAATATGTTTGTAATTTGTTTTTTTCTGCACCCATC
AAAAGCAATGGGGATAGATAATCTTAGTTGAGTGATAGAAGAAGGTTGTT
AATTATACATAAATGTATAAATCCTAAAGTTTATCGAATCTACAGATTAA
ATATTATATATATATACTATATTTGAAATTGGGGCATAGTTTAACCTTTA
AAGTATTATAGGGAGTAACGTGATATGTTTCTAAAGTATCTTGTTAAATT
TTTATTTGATCTTTTCGAAAAAAAAAAATCGTAATTACAGAAAAAAAATA
TTCTTGAGGAACAATTCCCTAAAAAATAATAGATANTTACAAAACATTCT
CCTTATTAATTTCCCGTGTCAAAAAAAAAAAAAATAGTATTGTTCCTCTC
ATTTCTTTGGCCAATTGCCCGGGCTATATTATTAATTCGGATACTAACTA
AGCAGACAATATATGAAGAAAAAAAAATACGTACGCATACTTTTATAATA
ATTTCATTAGTAATCAATATTATTTTATCCATTCTACATAGAACCAAAAT
GGCTTACAGCTGGGATAACCGTGTTAAATTCGTTGTTCGTTACATGTACG
ACATTGACAACAATGGCTTCCTTGATAAAAATGACTTTGAGTGCTTAGCT
GTACGTAACACCGTCATGGAAACTAAGGGCAAGTGGTGTGCCGATAAGTT
CAAGAAGAATCAAGAGATCATGTACAACCTCTGGAATGAAATCTCTGAGT
TAGCTGACTTTAACAAGGTAATTTATTTACATACACTGTGTTGAGAAGGG
AGGTTTTTTAGGAGCAATGAATTGTGCATTAACTAATTAATTATATTTTA
AATAATGCAATTAAATATGCTAAAAGATATCAATTGATATCACCATATAG
GATGGAGAGGMCACAACAGAAGAGTTCAAAAATGCTATTAAAAAAGTTTA
CATGGGAAAGAGTTTTGATGAACTGCCCCTTGGAGTTCGATCCTTTGTTT
CAGCAAAATTCAGAAATTTAGATATAAATGGTAAAATTAGTGATCATTGG
TAG
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