EMLSAG00000003347, EMLSAG00000003347-686113 (gene) Lepeophtheirus salmonis

Overview


Name	EMLSAG00000003347
Unique Name	EMLSAG00000003347-686113
Type	gene
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Homology

[Close]

BLAST of EMLSAG00000003347 vs. GO
Match: - (symbol:Lcp65Ad "Lcp65Ad" species:7227 "Drosophila melanogaster" [GO:0008010 "structural constituent of chitin-based larval cuticle" evidence=ISM;ISS] [GO:0005214 "structural constituent of chitin-based cuticle" evidence=ISS] [GO:0031012 "extracellular matrix" evidence=ISM] [GO:0040003 "chitin-based cuticle development" evidence=ISM] InterPro:IPR000618 Pfam:PF00379 PRINTS:PR00947 PROSITE:PS00233 PROSITE:PS51155 GO:GO:0031012 GO:GO:0040003 GO:GO:0008010 FlyBase:FBgn0020641 EMBL:BT001515 PRIDE:Q8IGZ8 InParanoid:Q8IGZ8 Bgee:Q8IGZ8 Uniprot:Q8IGZ8)

HSP 1 Score: 42.3578 bits (98), Expect = 4.561e-5
Identity = 18/37 (48.65%), Postives = 25/37 (67.57%), Query Frame = 0

Query:    1 MKGSYEYVGEDGQNYIVEW----NGFQASADHLPKEV 33
            ++GSY YVG+DGQ Y +++    NGFQ    HLP+ V
Sbjct:   91 VRGSYAYVGDDGQTYSIQYLADENGFQPEGAHLPRPV 127

[Close]

BLAST of EMLSAG00000003347 vs. GO
Match: - (symbol:Lcp65Ac "Lcp65Ac" species:7227 "Drosophila melanogaster" [GO:0008010 "structural constituent of chitin-based larval cuticle" evidence=ISM;ISS] [GO:0005214 "structural constituent of chitin-based cuticle" evidence=ISS] [GO:0040003 "chitin-based cuticle development" evidence=ISM] [GO:0031012 "extracellular matrix" evidence=ISM] InterPro:IPR000618 Pfam:PF00379 PRINTS:PR00947 PROSITE:PS00233 PROSITE:PS51155 EMBL:AE014296 GO:GO:0031012 GO:GO:0040003 GO:GO:0008010 GeneTree:ENSGT00530000064111 OrthoDB:EOG72JWJ7 EMBL:U84755 EMBL:U84745 EMBL:AY071303 RefSeq:NP_477279.1 UniGene:Dm.1665 IntAct:P92181 MINT:MINT-947791 STRING:7227.FBpp0076700 EnsemblMetazoa:FBtr0076991 GeneID:38708 KEGG:dme:Dmel_CG6956 UCSC:CG6956-RA CTD:38708 FlyBase:FBgn0020642 eggNOG:NOG255539 InParanoid:P92181 OMA:VAYETSN GenomeRNAi:38708 NextBio:809979 Uniprot:P92181)

HSP 1 Score: 40.0466 bits (92), Expect = 3.050e-4
Identity = 20/39 (51.28%), Postives = 25/39 (64.10%), Query Frame = 0

Query:    1 MKGSYEYVGEDGQ----NYIVEWNGFQASADHLPKEVPI 35
            ++GSY +V +DGQ    NYI + NGFQ    HLP  VPI
Sbjct:   70 VRGSYSFVADDGQTYTVNYIADENGFQPEGAHLPN-VPI 107

[Close]

BLAST of EMLSAG00000003347 vs. C. finmarchicus
Match: gi|592826276|gb|GAXK01129718.1| (TSA: Calanus finmarchicus comp70519_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 45.0542 bits (105), Expect = 7.367e-6
Identity = 22/40 (55.00%), Postives = 26/40 (65.00%), Query Frame = 0

Query:    1 MKGSYEYVGEDGQNYIVEW----NGFQASADHLPKEV-PI 35
            M+GSY Y G DG NY+V+W     G+  SA HLPK V PI
Sbjct:   43 MRGSYSYPGADGLNYVVDWYADETGYHPSAPHLPKSVEPI 162

[Close]

BLAST of EMLSAG00000003347 vs. C. finmarchicus
Match: gi|592830934|gb|GAXK01126610.1| (TSA: Calanus finmarchicus comp47245_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 45.0542 bits (105), Expect = 1.004e-5
Identity = 21/37 (56.76%), Postives = 23/37 (62.16%), Query Frame = 0

Query:    1 MKGSYEYVGEDGQNYIVEW----NGFQASADHLPKEV 33
            M GSYE+ G DG  Y VEW     GF A+A HLPK V
Sbjct: 1057 MTGSYEFTGADGVVYAVEWYADETGFHATAPHLPKSV 1167

[Close]

BLAST of EMLSAG00000003347 vs. C. finmarchicus
Match: gi|592866612|gb|GAXK01090950.1| (TSA: Calanus finmarchicus comp457473_c0_seq4 transcribed RNA sequence)

HSP 1 Score: 42.743 bits (99), Expect = 1.736e-5
Identity = 20/39 (51.28%), Postives = 23/39 (58.97%), Query Frame = 0

Query:    2 KGSYEYVGEDGQNYIVEW----NGFQASADHLPKEVPIP 36
            KGSY +  EDG    V W    NGFQA+ DHLP   P+P
Sbjct:  263 KGSYSFTSEDGVVLTVNWVADENGFQATGDHLPTPPPMP 379

[Close]

BLAST of EMLSAG00000003347 vs. C. finmarchicus
Match: gi|592866614|gb|GAXK01090948.1| (TSA: Calanus finmarchicus comp457473_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 42.743 bits (99), Expect = 2.807e-5
Identity = 20/39 (51.28%), Postives = 23/39 (58.97%), Query Frame = 0

Query:    2 KGSYEYVGEDGQNYIVEW----NGFQASADHLPKEVPIP 36
            KGSY +  EDG    V W    NGFQA+ DHLP   P+P
Sbjct:  263 KGSYSFTSEDGVVLTVNWVADENGFQATGDHLPTPPPMP 379

[Close]

BLAST of EMLSAG00000003347 vs. C. finmarchicus
Match: gi|592866613|gb|GAXK01090949.1| (TSA: Calanus finmarchicus comp457473_c0_seq3 transcribed RNA sequence)

HSP 1 Score: 41.2022 bits (95), Expect = 6.967e-5
Identity = 19/39 (48.72%), Postives = 22/39 (56.41%), Query Frame = 0

Query:    2 KGSYEYVGEDGQNYIVEW----NGFQASADHLPKEVPIP 36
            +GSY Y G D     V W    NGFQA+ DHLP   P+P
Sbjct:  266 RGSYSYTGPDNVVVTVNWVADENGFQATGDHLPTPPPMP 382

[Close]

BLAST of EMLSAG00000003347 vs. C. finmarchicus
Match: gi|592866615|gb|GAXK01090947.1| (TSA: Calanus finmarchicus comp457473_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 41.2022 bits (95), Expect = 1.049e-4
Identity = 19/39 (48.72%), Postives = 22/39 (56.41%), Query Frame = 0

Query:    2 KGSYEYVGEDGQNYIVEW----NGFQASADHLPKEVPIP 36
            +GSY Y G D     V W    NGFQA+ DHLP   P+P
Sbjct:  266 RGSYSYTGPDNVVVTVNWVADENGFQATGDHLPTPPPMP 382

[Close]

BLAST of EMLSAG00000003347 vs. C. finmarchicus
Match: gi|592937100|gb|GAXK01021453.1| (TSA: Calanus finmarchicus comp2214035_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 39.2762 bits (90), Expect = 3.291e-4
Identity = 18/39 (46.15%), Postives = 22/39 (56.41%), Query Frame = 0

Query:    2 KGSYEYVGEDGQNYIVEW----NGFQASADHLPKEVPIP 36
            +G+Y Y G DG  Y VEW    NG+ A   HLP   P+P
Sbjct:  129 RGTYSYPGPDGVRYTVEWTADENGYVARGAHLPTPPPMP 245

[Close]

BLAST of EMLSAG00000003347 vs. C. finmarchicus
Match: gi|592943648|gb|GAXK01014905.1| (TSA: Calanus finmarchicus comp8144_c2_seq1 transcribed RNA sequence)

HSP 1 Score: 38.5058 bits (88), Expect = 1.143e-3
Identity = 21/40 (52.50%), Postives = 24/40 (60.00%), Query Frame = 0

Query:    1 MKGSYEYVGEDGQNYIVEW----NGFQASADHLPKEV-PI 35
            M+GSY YVG DG  + V+W     GF  SA  LPK V PI
Sbjct:  485 MEGSYSYVGVDGNTWTVDWYADETGFHPSAPFLPKSVEPI 604

[Close]

BLAST of EMLSAG00000003347 vs. C. finmarchicus
Match: gi|592848659|gb|GAXK01108885.1| (TSA: Calanus finmarchicus comp297777_c0_seq3 transcribed RNA sequence)

HSP 1 Score: 36.1946 bits (82), Expect = 5.124e-3
Identity = 19/39 (48.72%), Postives = 23/39 (58.97%), Query Frame = 0

Query:    2 KGSYEYVGEDGQNYIVEW----NGFQASADHLPKEVPIP 36
            +GSY Y   D + Y V W    NGFQA+ DHLP   P+P
Sbjct:  179 QGSYTYTEGDVR-YTVNWVANENGFQATGDHLPTPPPLP 292

[Close]

BLAST of EMLSAG00000003347 vs. C. finmarchicus
Match: gi|592929502|gb|GAXK01029043.1| (TSA: Calanus finmarchicus comp3855673_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 35.4242 bits (80), Expect = 1.324e-2
Identity = 17/38 (44.74%), Postives = 23/38 (60.53%), Query Frame = 0

Query:    1 MKGSYEYVGEDGQNYIVEWN-----GFQASADHLPKEV 33
            +KG Y Y+ E+G    +E+N     GF+A  DHLPK V
Sbjct:  457 VKGKYGYLDENGILKTIEYNAGKTDGFKAQGDHLPKPV 570

HSP 2 Score: 35.4242 bits (80), Expect = 1.517e-2
Identity = 17/38 (44.74%), Postives = 23/38 (60.53%), Query Frame = 0

Query:    1 MKGSYEYVGEDGQNYIVEWN-----GFQASADHLPKEV 33
            +KG Y Y+ E+G    +E+N     GF+A  DHLPK V
Sbjct:  953 VKGKYGYLDENGILKTIEYNAGKTDGFKAQGDHLPKPV 1066

[Close]

BLAST of EMLSAG00000003347 vs. L. salmonis peptides
Match: EMLSAP00000003347 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1832:45674:45976:-1 gene:EMLSAG00000003347 transcript:EMLSAT00000003347 description:"maker-LSalAtl2s1832-snap-gene-0.22")

HSP 1 Score: 188.734 bits (478), Expect = 4.575e-63
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0

Query:    1 MKGSYEYVGEDGQNYIVEWNGFQASADHLPKEVPIPFSEIAEAVAAQIAFAAQEDATGKFAATGGLGGSASAGGFQESVGASEQSQSVSPLSNXSR 96
            MKGSYEYVGEDGQNYIVEWNGFQASADHLPKEVPIPFSEIAEAVAAQIAFAAQEDATGKFAATGGLGGSASAGGFQESVGASEQSQSVSPLSNXSR
Sbjct:    1 MKGSYEYVGEDGQNYIVEWNGFQASADHLPKEVPIPFSEIAEAVAAQIAFAAQEDATGKFAATGGLGGSASAGGFQESVGASEQSQSVSPLSNXSR 96

[Close]

BLAST of EMLSAG00000003347 vs. L. salmonis peptides
Match: EMLSAP00000003195 (pep:novel supercontig:LSalAtl2s:LSalAtl2s17743:3:473:1 gene:EMLSAG00000003195 transcript:EMLSAT00000003195 description:"augustus_masked-LSalAtl2s17743-processed-gene-0.0")

HSP 1 Score: 118.627 bits (296), Expect = 6.521e-35
Identity = 66/103 (64.08%), Postives = 75/103 (72.82%), Query Frame = 0

Query:    1 MKGSYEYVGEDGQNYIVEW----NGFQASADHLPKEVPIPFSEIAEAVAAQIAFAAQED---ATGKFAATGGLGGSASAGGFQESVGASEQSQSVSPLSNXSR 96
            M GSYEYVG+DGQ Y+V+W    NGFQ SA HLPK+VPIPF EIAEAV AQIAFAAQED    +       GL GSA+AGGFQ+S  AS QS+S +PLSN  R
Sbjct:   53 MTGSYEYVGKDGQTYVVDWIADENGFQPSAAHLPKDVPIPFPEIAEAVEAQIAFAAQEDAAVGSAAAGGXDGLSGSAAAGGFQQSFSASGQSESXAPLSNYGR 155

[Close]

BLAST of EMLSAG00000003347 vs. L. salmonis peptides
Match: EMLSAP00000005214 (pep:novel supercontig:LSalAtl2s:LSalAtl2s27587:49:351:-1 gene:EMLSAG00000005214 transcript:EMLSAT00000005214 description:"augustus_masked-LSalAtl2s27587-processed-gene-0.0")

HSP 1 Score: 112.849 bits (281), Expect = 2.611e-33
Identity = 71/100 (71.00%), Postives = 78/100 (78.00%), Query Frame = 0

Query:    1 MKGSYEYVGEDGQNYIVEW----NGFQASADHLPKEVPIPFSEIAEAVAAQIAFAAQEDATGKFAATGGLGGSASAGGFQESVGASEQSQSVSPLSNXSR 96
            M GSYEYVG+DGQ Y+V+W    NGFQ S  HLPKEVPIPF EIAEAVAAQIAFAAQEDA    A TGGL GS + GGFQ+S G S QS+SV+PLSNX R
Sbjct:    1 MTGSYEYVGKDGQAYVVDWIADENGFQPSGAHLPKEVPIPFPEIAEAVAAQIAFAAQEDAALGSATTGGLSGSPAIGGFQQSFGXSGQSESVAPLSNXGR 100

[Close]

BLAST of EMLSAG00000003347 vs. L. salmonis peptides
Match: EMLSAP00000004809 (pep:novel supercontig:LSalAtl2s:LSalAtl2s25422:80:397:-1 gene:EMLSAG00000004809 transcript:EMLSAT00000004809 description:"augustus_masked-LSalAtl2s25422-processed-gene-0.0")

HSP 1 Score: 96.2857 bits (238), Expect = 8.476e-27
Identity = 69/102 (67.65%), Postives = 76/102 (74.51%), Query Frame = 0

Query:    1 MKGSYEYVGEDGQNYIVEW----NGFQASADHLPKEVPIPFSEIAEAVAAQIAFAAQEDATGKFAATGG---LGGS--ASAGGFQESVGASEQSQSVSPLSN 93
            M GSYEYVGEDGQ Y+V+W    NGFQ SA HLPKEVPIPF EIAEAVAAQIAFAA ED+ G+ AA G    L  S  A+AG FQ+S GAS QSQSV+ LS 
Sbjct:    1 MTGSYEYVGEDGQTYVVDWIADENGFQPSAAHLPKEVPIPFPEIAEAVAAQIAFAAXEDSAGESAAAGSDEELVDSSVAAAGEFQQSFGASGQSQSVALLSK 102

[Close]

BLAST of EMLSAG00000003347 vs. L. salmonis peptides
Match: EMLSAP00000012374 (pep:novel supercontig:LSalAtl2s:LSalAtl2s9060:76:692:1 gene:EMLSAG00000012374 transcript:EMLSAT00000012374 description:"augustus_masked-LSalAtl2s9060-processed-gene-0.0")

HSP 1 Score: 85.5001 bits (210), Expect = 4.998e-22
Identity = 39/51 (76.47%), Postives = 43/51 (84.31%), Query Frame = 0

Query:    1 MKGSYEYVGEDGQNYIVEW----NGFQASADHLPKEVPIPFSEIAEAVAAQ 47
            MKGSYEY+G+DGQ Y+V+W    NGFQ SA HLPKEVPIPF EIAEAVAAQ
Sbjct:  120 MKGSYEYIGDDGQTYVVDWIADENGFQPSAAHLPKEVPIPFPEIAEAVAAQ 170

[Close]

BLAST of EMLSAG00000003347 vs. L. salmonis peptides
Match: EMLSAP00000002920 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1682:15016:15642:-1 gene:EMLSAG00000002920 transcript:EMLSAT00000002920 description:"augustus_masked-LSalAtl2s1682-processed-gene-0.0")

HSP 1 Score: 83.5741 bits (205), Expect = 4.147e-21
Identity = 39/64 (60.94%), Postives = 48/64 (75.00%), Query Frame = 0

Query:    1 MKGSYEYVGEDGQNYIVEW----NGFQASADHLPKEVPIPFSEIAEAVAAQIAFAAQEDATGKF 60
            MKGSY YVG DGQNY+V+W     G+  SA HLP+EV IP+ EIA+AV +QI FAA+E+A G F
Sbjct:  122 MKGSYSYVGPDGQNYVVDWYADETGYHPSAPHLPREVSIPYPEIADAVNSQITFAAEEEAKGIF 185

[Close]

BLAST of EMLSAG00000003347 vs. L. salmonis peptides
Match: EMLSAP00000004219 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2225:16769:17023:-1 gene:EMLSAG00000004219 transcript:EMLSAT00000004219 description:"augustus_masked-LSalAtl2s2225-processed-gene-0.1")

HSP 1 Score: 78.1814 bits (191), Expect = 5.974e-20
Identity = 36/58 (62.07%), Postives = 44/58 (75.86%), Query Frame = 0

Query:    1 MKGSYEYVGEDGQNYIVEW----NGFQASADHLPKEVPIPFSEIAEAVAAQIAFAAQE 54
            MKGSY+YVG DGQ Y+++W     G+  SA HLP++VPIP+ EIA AV AQIAFAA E
Sbjct:    1 MKGSYKYVGPDGQTYVLDWYADETGYHPSAPHLPQDVPIPYPEIANAVDAQIAFAATE 58

[Close]

BLAST of EMLSAG00000003347 vs. L. salmonis peptides
Match: EMLSAP00000005389 (pep:novel supercontig:LSalAtl2s:LSalAtl2s29058:3:344:-1 gene:EMLSAG00000005389 transcript:EMLSAT00000005389 description:"augustus_masked-LSalAtl2s29058-processed-gene-0.0")

HSP 1 Score: 75.0998 bits (183), Expect = 1.308e-18
Identity = 39/52 (75.00%), Postives = 41/52 (78.85%), Query Frame = 0

Query:   10 EDGQNYIVEW----NGFQASADHLPKEVPIPFSEIAEAVAAQIAFAAQEDAT 57
            EDGQ Y+V+W    NGF  SA  LPKEVPIPFSEIAEAV AQIAFAAQEDA 
Sbjct:   63 EDGQXYVVDWIADENGFXPSAAXLPKEVPIPFSEIAEAVEAQIAFAAQEDAN 114

[Close]

BLAST of EMLSAG00000003347 vs. L. salmonis peptides
Match: EMLSAP00000003401 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1878:5671:6427:1 gene:EMLSAG00000003401 transcript:EMLSAT00000003401 description:"augustus_masked-LSalAtl2s1878-processed-gene-0.0")

HSP 1 Score: 75.485 bits (184), Expect = 5.509e-18
Identity = 35/56 (62.50%), Postives = 42/56 (75.00%), Query Frame = 0

Query:    1 MKGSYEYVGEDGQNYIVEW----NGFQASADHLPKEVPIPFSEIAEAVAAQIAFAA 52
            MKGSYEYVG +GQ Y+VEW     G+  S  HLPK+VPIP+  IA AV+AQI+FAA
Sbjct:  142 MKGSYEYVGPNGQTYVVEWYADETGYHPSGPHLPKDVPIPYXXIANAVSAQISFAA 197

[Close]

BLAST of EMLSAG00000003347 vs. L. salmonis peptides
Match: EMLSAP00000005388 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2901:64:7290:-1 gene:EMLSAG00000005388 transcript:EMLSAT00000005388 description:"maker-LSalAtl2s2901-snap-gene-0.4")

HSP 1 Score: 71.633 bits (174), Expect = 3.381e-16
Identity = 48/96 (50.00%), Postives = 58/96 (60.42%), Query Frame = 0

Query:    3 GSYEYVGEDGQNYIVEWNGFQASADHLPKEVPIPFSEIAEAVAAQIAFAAQED--ATGKFAATGGLGGSASAGGFQESVGASEQSQSVSPLSNXSR 96
            GS   +GE       E NGFQ SA HLPK+V IPF EIA+AV +QIAFAAQED       + TG   GS +  GF +S G S  + SV+PLS+  R
Sbjct:  250 GSTVTIGE-------ESNGFQPSAPHLPKDVTIPFPEIADAVESQIAFAAQEDEAGGSGASGTGRFDGSDTVVGFGQSFGVSVNNPSVAPLSSYGR 338

[Close]

BLAST of EMLSAG00000003347 vs. Select Arthropod Genomes
Match: gb|EEZ98927.2| (Endocuticle structural glycoprotein SgAbd-2-like Protein [Tribolium castaneum])

HSP 1 Score: 51.6026 bits (122), Expect = 1.095e-8
Identity = 29/57 (50.88%), Postives = 36/57 (63.16%), Query Frame = 0

Query:    1 MKGSYEYVGEDGQ----NYIVEWNGFQASADHLPKEVPIPFSEIAEAVAAQIAFAAQ 53
            ++GSY Y G DG     NYI + NGF+AS DH+P   P+P +EIAEAV    A  AQ
Sbjct:   83 IQGSYSYTGPDGVIYTVNYIADENGFRASGDHIPTAAPVP-AEIAEAVQQNAAEEAQ 138

[Close]

BLAST of EMLSAG00000003347 vs. nr
Match: gi|290563078|gb|ADD38933.1| (Cuticle protein 3 [Lepeophtheirus salmonis])

HSP 1 Score: 118.242 bits (295), Expect = 2.733e-31
Identity = 72/100 (72.00%), Postives = 79/100 (79.00%), Query Frame = 0

Query:    1 MKGSYEYVGEDGQNYIVEW----NGFQASADHLPKEVPIPFSEIAEAVAAQIAFAAQEDATGKFAATGGLGGSASAGGFQESVGASEQSQSVSPLSNXSR 96
            M GSY+YVGEDGQ Y+V+W    NGFQ S  HLPKEVPIPF EIAEAVAAQIAFAAQEDA    A TGGL GS +AGGFQ+S GAS QS+SV+PLSN  R
Sbjct:  120 MTGSYQYVGEDGQTYVVDWVADENGFQPSGAHLPKEVPIPFPEIAEAVAAQIAFAAQEDAALGSATTGGLSGSPAAGGFQQSFGASGQSESVAPLSNYGR 219

[Close]

BLAST of EMLSAG00000003347 vs. nr
Match: gi|290462295|gb|ADD24195.1| (Larval cuticle protein 8 [Lepeophtheirus salmonis])

HSP 1 Score: 115.931 bits (289), Expect = 2.934e-30
Identity = 70/100 (70.00%), Postives = 78/100 (78.00%), Query Frame = 0

Query:    1 MKGSYEYVGEDGQNYIVEW----NGFQASADHLPKEVPIPFSEIAEAVAAQIAFAAQEDATGKFAATGGLGGSASAGGFQESVGASEQSQSVSPLSNXSR 96
            M GSYEYVG+DGQ Y+V+W    NGFQ S  HLPKEVPIPF EIAEAVAAQIAFAA+EDA    A TGGL GS + GGFQ+S GAS QS+SV+PLSN  R
Sbjct:  128 MTGSYEYVGKDGQTYVVDWIADENGFQPSGAHLPKEVPIPFPEIAEAVAAQIAFAAREDAAVGSATTGGLSGSPATGGFQQSFGASGQSESVAPLSNYGR 227

[Close]

BLAST of EMLSAG00000003347 vs. nr
Match: gi|155966332|gb|ABU41118.1| (putative cuticle protein [Lepeophtheirus salmonis])

HSP 1 Score: 111.309 bits (277), Expect = 9.348e-29
Identity = 69/116 (59.48%), Postives = 77/116 (66.38%), Query Frame = 0

Query:    1 MKGSYEYVGEDGQNYIVEW----NGFQASADHLPKEVPIPFSEIAEAVAAQIAFAAQEDA----TGKFAATGGLGGSA------------SAGGFQESVGASEQSQSVSPLSNXSR 96
            MKGSYEYVG DGQ Y+V+W    NGFQ SA HLPK+VPIPF EIAEAV AQIAFAAQEDA     GK  + GG GGS              AGGFQ+S GAS  + SV+PLS+  R
Sbjct:   90 MKGSYEYVGPDGQTYVVDWIADENGFQPSAAHLPKDVPIPFPEIAEAVEAQIAFAAQEDAAGGSAGKVGSAGGFGGSVATGGAGGFGGSTGAGGFQQSFGASGNTPSVAPLSSYGR 205

[Close]

BLAST of EMLSAG00000003347 vs. nr
Match: gi|155966336|gb|ABU41120.1| (putative cuticle protein, partial [Lepeophtheirus salmonis])

HSP 1 Score: 108.612 bits (270), Expect = 2.273e-27
Identity = 68/100 (68.00%), Postives = 76/100 (76.00%), Query Frame = 0

Query:    1 MKGSYEYVGEDGQNYIVEW----NGFQASADHLPKEVPIPFSEIAEAVAAQIAFAAQEDATGKFAATGGLGGSASAGGFQESVGASEQSQSVSPLSNXSR 96
            MKGSYEY+G+DGQ Y+V+W    NGFQ SA HLPKEVPIPF EIAEAV AQIAFAAQEDA G   + GG GGSA+ G  Q S GAS QSQSV+PL+   R
Sbjct:  130 MKGSYEYIGDDGQKYVVDWIADENGFQPSAPHLPKEVPIPFPEIAEAVEAQIAFAAQEDAAGGSGSAGGFGGSAAGGFGQ-SFGASSQSQSVAPLTQYGR 228

[Close]

BLAST of EMLSAG00000003347 vs. nr
Match: gi|155966344|gb|ABU41124.1| (putative cuticle protein, partial [Lepeophtheirus salmonis])

HSP 1 Score: 104.76 bits (260), Expect = 1.449e-26
Identity = 63/120 (52.50%), Postives = 74/120 (61.67%), Query Frame = 0

Query:    1 MKGSYEYVGEDGQNYIVEW----NGFQASADHLPKEVPIPFSEIAEAVAAQIAFAAQED-ATGKFAATGGLGGSAS-----------------------AGGFQESVGASEQSQSVSPLS 92
            MKGSYEY+G+DGQ Y+V+W    NGFQ SA HLPKEVPIPF EIAEAV AQIAFAAQED ATG  +  GG  G +S                       +G  Q++ GAS Q QS +PL+
Sbjct:   50 MKGSYEYIGDDGQTYVVDWIADENGFQPSAPHLPKEVPIPFPEIAEAVEAQIAFAAQEDAATGGSSFNGGFQGQSSGFQGQSSGFQGQSSGFQGQSSGFSGLVQQNFGASNQVQSSAPLT 169

[Close]

BLAST of EMLSAG00000003347 vs. nr
Match: gi|155966118|gb|ABU41014.1| (cuticle protein [Lepeophtheirus salmonis])

HSP 1 Score: 103.219 bits (256), Expect = 1.271e-25
Identity = 69/116 (59.48%), Postives = 76/116 (65.52%), Query Frame = 0

Query:    1 MKGSYEYVGEDGQNYIVEW----NGFQASADHLPKEVPIPFSEIAEAVAAQIAFAAQEDATGKFA----------------ATGGLGGSASAGGFQESVGASEQSQSVSPLSNXSR 96
            MKGSYEYVG DGQ Y+V+W    NGFQ SA HLPK+VPIPF EIAEAV AQIAFAAQEDA G  A                  GG GGS  AGGFQ+S GAS  + SV+PLS+  R
Sbjct:   90 MKGSYEYVGPDGQTYVVDWIADENGFQPSAAHLPKDVPIPFPEIAEAVEAQIAFAAQEDAAGGSAGKVGSAGGFGGAVATGGAGGFGGSTGAGGFQQSFGASGNTPSVAPLSSYGR 205

[Close]

BLAST of EMLSAG00000003347 vs. nr
Match: gi|225713618|gb|ACO12655.1| (Cuticle protein CP14.6 precursor [Lepeophtheirus salmonis])

HSP 1 Score: 96.2857 bits (238), Expect = 2.218e-22
Identity = 68/116 (58.62%), Postives = 75/116 (64.66%), Query Frame = 0

Query:    1 MKGSYEYVGEDGQNYIVEW----NGFQASADHLPKEVPIPFSEIAEAVAAQIAFAAQEDATG----------------KFAATGGLGGSASAGGFQESVGASEQSQSVSPLSNXSR 96
            MKGSYEYVG DGQ Y+V+W    NGFQ SA HLPK+VPIPF EIAEAV AQIAFAAQEDA G                     GG GGS  AGGFQ+S GAS  + SV+PLS+  R
Sbjct:  143 MKGSYEYVGADGQTYVVDWIADENGFQPSAAHLPKDVPIPFPEIAEAVEAQIAFAAQEDAAGGSAGKGGSAGGFGGSVATGGAGGFGGSTGAGGFQQSFGASGNTPSVAPLSSYGR 258

[Close]

BLAST of EMLSAG00000003347 vs. nr
Match: gi|225713490|gb|ACO12591.1| (Cuticle protein CP14.6 precursor [Lepeophtheirus salmonis])

HSP 1 Score: 93.9745 bits (232), Expect = 9.774e-22
Identity = 69/100 (69.00%), Postives = 75/100 (75.00%), Query Frame = 0

Query:    1 MKGSYEYVGEDGQNYIVEW----NGFQASADHLPKEVPIPFSEIAEAVAAQIAFAAQEDATGKFAATGGLGGSASAGGFQESVGASEQSQSVSPLSNXSR 96
            MKGSYEYVG DGQ Y+V+W    NGFQ SA HLPKEVPIPF EIAEAVAAQIAFAAQEDA G   + GG  GSA+ G  Q S GAS QSQSV+PL+   R
Sbjct:  130 MKGSYEYVGPDGQTYVVDWIADENGFQPSAPHLPKEVPIPFPEIAEAVAAQIAFAAQEDAAGGSTSAGGFSGSAAGGFGQ-SFGASSQSQSVAPLTRYGR 228

[Close]

BLAST of EMLSAG00000003347 vs. nr
Match: gi|225714550|gb|ACO13121.1| (Cuticle protein CP14.6 precursor [Lepeophtheirus salmonis])

HSP 1 Score: 93.9745 bits (232), Expect = 1.076e-21
Identity = 72/100 (72.00%), Postives = 77/100 (77.00%), Query Frame = 0

Query:    1 MKGSYEYVGEDGQNYIVEW----NGFQASADHLPKEVPIPFSEIAEAVAAQIAFAAQEDATGKFAATGGLGGSASAGGFQESVGASEQSQSVSPLSNXSR 96
            MKGSYEYVG DGQ Y+V+W    NGFQ SA HLPKEVPIPF EIAEAVAAQIAFAAQEDA G   + GG GGSA+ G  Q S GAS QSQSV+PLSN  R
Sbjct:  130 MKGSYEYVGPDGQTYVVDWIADENGFQPSAPHLPKEVPIPFPEIAEAVAAQIAFAAQEDAAGGSGSAGGFGGSAAGGFGQ-SFGASSQSQSVAPLSNYGR 228

[Close]

BLAST of EMLSAG00000003347 vs. nr
Match: gi|225713142|gb|ACO12417.1| (Cuticle protein CP14.6 precursor [Lepeophtheirus salmonis])

HSP 1 Score: 93.5893 bits (231), Expect = 1.198e-21
Identity = 72/100 (72.00%), Postives = 77/100 (77.00%), Query Frame = 0

Query:    1 MKGSYEYVGEDGQNYIVEW----NGFQASADHLPKEVPIPFSEIAEAVAAQIAFAAQEDATGKFAATGGLGGSASAGGFQESVGASEQSQSVSPLSNXSR 96
            MKGSYEYVG DGQ Y+V+W    NGFQ SA HLPKEVPIPF EIAEAVAAQIAFAAQEDA G   + GG GGSA+ G  Q S GAS QSQSV+PLSN  R
Sbjct:  130 MKGSYEYVGPDGQTYVVDWIADENGFQPSAPHLPKEVPIPFPEIAEAVAAQIAFAAQEDAAGGSGSAGGFGGSAAGGFGQ-SFGASSQSQSVAPLSNYGR 228

[Close]

BLAST of EMLSAG00000003347 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold119_size336447-snap-gene-1.13 (protein:Tk11781 transcript:maker-scaffold119_size336447-snap-gene-1.13-mRNA-1 annotation:"cuticle protein")

HSP 1 Score: 71.633 bits (174), Expect = 2.066e-16
Identity = 38/70 (54.29%), Postives = 47/70 (67.14%), Query Frame = 0

Query:    1 MKGSYEYVGEDGQNYIVEW----NGFQASADHLPKEVPIPFSEIAEAVAAQIAFAAQEDATGKFAATGGL 66
            M+GSY Y G DG++Y+V W    NG++A AD LP    IPF E AEAVAAQI F AQE+ T + A+ G L
Sbjct:  358 MRGSYSYTGNDGRDYLVSWVADENGYRAEADFLPLAPEIPFPEQAEAVAAQIRF-AQEERTAESASQGRL 426

[Close]

BLAST of EMLSAG00000003347 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold1164_size58058-snap-gene-0.13 (protein:Tk12394 transcript:maker-scaffold1164_size58058-snap-gene-0.13-mRNA-1 annotation:"transport protein sec61 subunit beta")

HSP 1 Score: 59.6918 bits (143), Expect = 3.297e-12
Identity = 32/62 (51.61%), Postives = 36/62 (58.06%), Query Frame = 0

Query:    1 MKGSYEYVGEDGQNYIVEW----NGFQASADHLPKEVPIPFSEIAEAVAAQIAFAAQEDATG 58
            M+GSY Y G DG  Y V W     G+  SA  LPK V IPF E   AV  QI FAA++DA G
Sbjct:  216 MEGSYSYPGTDGLTYSVNWFADETGYHPSAPFLPKPVEIPFPEQKAAVEEQIRFAAEQDALG 277

HSP 2 Score: 59.6918 bits (143), Expect = 3.297e-12
Identity = 32/62 (51.61%), Postives = 36/62 (58.06%), Query Frame = 0

Query:    1 MKGSYEYVGEDGQNYIVEW----NGFQASADHLPKEVPIPFSEIAEAVAAQIAFAAQEDATG 58
            M+GSY Y G DG  Y V W     G+  SA  LPK V IPF E   AV  QI FAA++DA G
Sbjct:  291 MEGSYSYPGTDGLTYSVNWFADETGYHPSAPFLPKPVEIPFPEQKAAVEEQIRFAAEQDALG 352

[Close]

BLAST of EMLSAG00000003347 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold119_size336447-processed-gene-0.2 (protein:Tk11769 transcript:snap_masked-scaffold119_size336447-processed-gene-0.2-mRNA-1 annotation:"---NA---")

HSP 1 Score: 58.5362 bits (140), Expect = 8.085e-12
Identity = 31/59 (52.54%), Postives = 38/59 (64.41%), Query Frame = 0

Query:    1 MKGSYEYVGEDGQNYIVEW----NGFQASADHLPKEVPIPFSEIAEAVAAQIAFAAQED 55
            M+GSY Y+  DGQ+  V W    NG++A +  LP    IPF E AEAVAAQI FA QE+
Sbjct:  626 MRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVAAQIRFAQQEE 684

[Close]

BLAST of EMLSAG00000003347 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold119_size336447-snap-gene-0.12 (protein:Tk11771 transcript:maker-scaffold119_size336447-snap-gene-0.12-mRNA-1 annotation:"GK16500")

HSP 1 Score: 58.5362 bits (140), Expect = 8.221e-12
Identity = 31/59 (52.54%), Postives = 38/59 (64.41%), Query Frame = 0

Query:    1 MKGSYEYVGEDGQNYIVEW----NGFQASADHLPKEVPIPFSEIAEAVAAQIAFAAQED 55
            M+GSY Y+  DGQ+  V W    NG++A +  LP    IPF E AEAVAAQI FA QE+
Sbjct:  375 MRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVAAQIRFAQQEE 433

HSP 2 Score: 53.9138 bits (128), Expect = 4.017e-10
Identity = 28/54 (51.85%), Postives = 34/54 (62.96%), Query Frame = 0

Query:    1 MKGSYEYVGEDGQNYIVEW----NGFQASADHLPKEVPIPFSEIAEAVAAQIAF 50
            M+GSY Y+  DGQ+  V W    NG++A +  LP    IPF E AEAVAAQI F
Sbjct:   85 MRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVAAQIRF 138

[Close]

BLAST of EMLSAG00000003347 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold850_size89018-snap-gene-0.25 (protein:Tk01249 transcript:maker-scaffold850_size89018-snap-gene-0.25-mRNA-1 annotation:"cuticular protein rr-1 motif 42 precursor")

HSP 1 Score: 58.151 bits (139), Expect = 1.103e-11
Identity = 31/58 (53.45%), Postives = 37/58 (63.79%), Query Frame = 0

Query:    1 MKGSYEYVGEDGQNYIVEW----NGFQASADHLPKEVPIPFSEIAEAVAAQIAFAAQE 54
            M+GSY Y+  DGQ+  V W    NG++A +  LP    IPF E AEAVAAQI FA QE
Sbjct:   89 MRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVAAQIRFAQQE 146

[Close]

BLAST of EMLSAG00000003347 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold119_size336447-snap-gene-0.14 (protein:Tk11773 transcript:maker-scaffold119_size336447-snap-gene-0.14-mRNA-1 annotation:"cuticular protein 46")

HSP 1 Score: 57.3806 bits (137), Expect = 1.809e-11
Identity = 30/59 (50.85%), Postives = 39/59 (66.10%), Query Frame = 0

Query:    1 MKGSYEYVGEDGQNYIVEW----NGFQASADHLPKEVPIPFSEIAEAVAAQIAFAAQED 55
            M+GSY Y+  +G++  V W    NG++A +  LP    IPF E AEAVAAQIAFA QE+
Sbjct:   86 MRGSYTYIDANGEDVTVSWVADENGYRAESSILPVAPAIPFPEQAEAVAAQIAFAQQEE 144

[Close]

BLAST of EMLSAG00000003347 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold119_size336447-snap-gene-0.16 (protein:Tk11774 transcript:maker-scaffold119_size336447-snap-gene-0.16-mRNA-1 annotation:"tricalbin- partial")

HSP 1 Score: 57.3806 bits (137), Expect = 1.812e-11
Identity = 30/59 (50.85%), Postives = 39/59 (66.10%), Query Frame = 0

Query:    1 MKGSYEYVGEDGQNYIVEW----NGFQASADHLPKEVPIPFSEIAEAVAAQIAFAAQED 55
            M+GSY Y+  +G++  V W    NG++A +  LP    IPF E AEAVAAQIAFA QE+
Sbjct:  105 MRGSYTYIDANGEDVTVSWVADENGYRAESSILPVAPAIPFPEQAEAVAAQIAFAQQEE 163

[Close]

BLAST of EMLSAG00000003347 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold119_size336447-snap-gene-1.12 (protein:Tk11777 transcript:maker-scaffold119_size336447-snap-gene-1.12-mRNA-1 annotation:"pupal cuticle protein 20 precursor")

HSP 1 Score: 56.9954 bits (136), Expect = 2.405e-11
Identity = 31/59 (52.54%), Postives = 35/59 (59.32%), Query Frame = 0

Query:    1 MKGSYEYVGEDGQNYIVEW----NGFQASADHLPKEVPIPFSEIAEAVAAQIAFAAQED 55
            MKGSY Y   DG+  +V W     G+   +D LP    IPF E AEAVAAQI FAA ED
Sbjct:  209 MKGSYSYTDVDGREVVVSWYADETGYHPESDILPVAPAIPFPEQAEAVAAQIRFAALED 267

[Close]

BLAST of EMLSAG00000003347 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold119_size336447-processed-gene-0.3 (protein:Tk11770 transcript:snap_masked-scaffold119_size336447-processed-gene-0.3-mRNA-1 annotation:"---NA---")

HSP 1 Score: 56.225 bits (134), Expect = 4.869e-11
Identity = 30/59 (50.85%), Postives = 38/59 (64.41%), Query Frame = 0

Query:    1 MKGSYEYVGEDGQNYIVEW----NGFQASADHLPKEVPIPFSEIAEAVAAQIAFAAQED 55
            M+GSY Y+  +G+   V W    NG++A +  LP    IPF E AEAVAAQIAFA QE+
Sbjct:   86 MRGSYTYIDANGEYVTVSWVADENGYRAESSILPVAPAIPFPEQAEAVAAQIAFAQQEE 144

[Close]

BLAST of EMLSAG00000003347 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold850_size89018-snap-gene-0.21 (protein:Tk01245 transcript:maker-scaffold850_size89018-snap-gene-0.21-mRNA-1 annotation:"cuticle protein")

HSP 1 Score: 56.225 bits (134), Expect = 5.018e-11
Identity = 30/59 (50.85%), Postives = 37/59 (62.71%), Query Frame = 0

Query:    1 MKGSYEYVGEDGQNYIVEW----NGFQASADHLPKEVPIPFSEIAEAVAAQIAFAAQED 55
            M+GSY Y+  DGQ+  V W    NG++A +  LP    IPF E AEAVAAQI FA  E+
Sbjct:  568 MRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVAAQIRFAQLEE 626

The following BLAST results are available for this feature:

BLAST of EMLSAG00000003347 vs. GO
BLAST of EMLSAG00000003347 vs. C. finmarchicus
BLAST of EMLSAG00000003347 vs. L. salmonis peptides
BLAST of EMLSAG00000003347 vs. SwissProt
BLAST of EMLSAG00000003347 vs. Select Arthropod Genomes
BLAST of EMLSAG00000003347 vs. nr
BLAST of EMLSAG00000003347 vs. Tigriopus kingsejongenis genes

BLAST of EMLSAG00000003347 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 2


Match Name	E-value	Identity	Description
-	4.561e-5	48.65	symbol:Lcp65Ad "Lcp65Ad" species:7227 "Drosophila ...	[more]
-	3.050e-4	51.28	symbol:Lcp65Ac "Lcp65Ac" species:7227 "Drosophila ...	[more]

BLAST of EMLSAG00000003347 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 24


Match Name	E-value	Identity	Description
gi\|592826276\|gb\|GAXK01129718.1\|	7.367e-6	55.00	TSA: Calanus finmarchicus comp70519_c0_seq1 transc...	[more]
gi\|592830934\|gb\|GAXK01126610.1\|	1.004e-5	56.76	TSA: Calanus finmarchicus comp47245_c0_seq1 transc...	[more]
gi\|592866612\|gb\|GAXK01090950.1\|	1.736e-5	51.28	TSA: Calanus finmarchicus comp457473_c0_seq4 trans...	[more]
gi\|592866614\|gb\|GAXK01090948.1\|	2.807e-5	51.28	TSA: Calanus finmarchicus comp457473_c0_seq2 trans...	[more]
gi\|592866613\|gb\|GAXK01090949.1\|	6.967e-5	48.72	TSA: Calanus finmarchicus comp457473_c0_seq3 trans...	[more]
gi\|592866615\|gb\|GAXK01090947.1\|	1.049e-4	48.72	TSA: Calanus finmarchicus comp457473_c0_seq1 trans...	[more]
gi\|592937100\|gb\|GAXK01021453.1\|	3.291e-4	46.15	TSA: Calanus finmarchicus comp2214035_c0_seq1 tran...	[more]
gi\|592943648\|gb\|GAXK01014905.1\|	1.143e-3	52.50	TSA: Calanus finmarchicus comp8144_c2_seq1 transcr...	[more]
gi\|592848659\|gb\|GAXK01108885.1\|	5.124e-3	48.72	TSA: Calanus finmarchicus comp297777_c0_seq3 trans...	[more]
gi\|592929502\|gb\|GAXK01029043.1\|	1.324e-2	44.74	TSA: Calanus finmarchicus comp3855673_c0_seq1 tran...	[more]

Pages

BLAST of EMLSAG00000003347 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 19


Match Name	E-value	Identity	Description
EMLSAP00000003347	4.575e-63	100.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s1832:4567...	[more]
EMLSAP00000003195	6.521e-35	64.08	pep:novel supercontig:LSalAtl2s:LSalAtl2s17743:3:4...	[more]
EMLSAP00000005214	2.611e-33	71.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s27587:49:...	[more]
EMLSAP00000004809	8.476e-27	67.65	pep:novel supercontig:LSalAtl2s:LSalAtl2s25422:80:...	[more]
EMLSAP00000012374	4.998e-22	76.47	pep:novel supercontig:LSalAtl2s:LSalAtl2s9060:76:6...	[more]
EMLSAP00000002920	4.147e-21	60.94	pep:novel supercontig:LSalAtl2s:LSalAtl2s1682:1501...	[more]
EMLSAP00000004219	5.974e-20	62.07	pep:novel supercontig:LSalAtl2s:LSalAtl2s2225:1676...	[more]
EMLSAP00000005389	1.308e-18	75.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s29058:3:3...	[more]
EMLSAP00000003401	5.509e-18	62.50	pep:novel supercontig:LSalAtl2s:LSalAtl2s1878:5671...	[more]
EMLSAP00000005388	3.381e-16	50.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s2901:64:7...	[more]

Pages

BLAST of EMLSAG00000003347 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000003347 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 1


Match Name	E-value	Identity	Description
gb\|EEZ98927.2\|	1.095e-8	50.88	Endocuticle structural glycoprotein SgAbd-2-like P...	[more]

BLAST of EMLSAG00000003347 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 18


Match Name	E-value	Identity	Description
gi\|290563078\|gb\|ADD38933.1\|	2.733e-31	72.00	Cuticle protein 3 [Lepeophtheirus salmonis]	[more]
gi\|290462295\|gb\|ADD24195.1\|	2.934e-30	70.00	Larval cuticle protein 8 [Lepeophtheirus salmonis]	[more]
gi\|155966332\|gb\|ABU41118.1\|	9.348e-29	59.48	putative cuticle protein [Lepeophtheirus salmonis]	[more]
gi\|155966336\|gb\|ABU41120.1\|	2.273e-27	68.00	putative cuticle protein, partial [Lepeophtheirus ...	[more]
gi\|155966344\|gb\|ABU41124.1\|	1.449e-26	52.50	putative cuticle protein, partial [Lepeophtheirus ...	[more]
gi\|155966118\|gb\|ABU41014.1\|	1.271e-25	59.48	cuticle protein [Lepeophtheirus salmonis]	[more]
gi\|225713618\|gb\|ACO12655.1\|	2.218e-22	58.62	Cuticle protein CP14.6 precursor [Lepeophtheirus s...	[more]
gi\|225713490\|gb\|ACO12591.1\|	9.774e-22	69.00	Cuticle protein CP14.6 precursor [Lepeophtheirus s...	[more]
gi\|225714550\|gb\|ACO13121.1\|	1.076e-21	72.00	Cuticle protein CP14.6 precursor [Lepeophtheirus s...	[more]
gi\|225713142\|gb\|ACO12417.1\|	1.198e-21	72.00	Cuticle protein CP14.6 precursor [Lepeophtheirus s...	[more]

Pages

BLAST of EMLSAG00000003347 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 18


Match Name	E-value	Identity	Description
maker-scaffold119_size336447-snap-gene-1.13	2.066e-16	54.29	protein:Tk11781 transcript:maker-scaffold119_size3...	[more]
maker-scaffold1164_size58058-snap-gene-0.13	3.297e-12	51.61	protein:Tk12394 transcript:maker-scaffold1164_size...	[more]
snap_masked-scaffold119_size336447-processed-gene-0.2	8.085e-12	52.54	protein:Tk11769 transcript:snap_masked-scaffold119...	[more]
maker-scaffold119_size336447-snap-gene-0.12	8.221e-12	52.54	protein:Tk11771 transcript:maker-scaffold119_size3...	[more]
maker-scaffold850_size89018-snap-gene-0.25	1.103e-11	53.45	protein:Tk01249 transcript:maker-scaffold850_size8...	[more]
maker-scaffold119_size336447-snap-gene-0.14	1.809e-11	50.85	protein:Tk11773 transcript:maker-scaffold119_size3...	[more]
maker-scaffold119_size336447-snap-gene-0.16	1.812e-11	50.85	protein:Tk11774 transcript:maker-scaffold119_size3...	[more]
maker-scaffold119_size336447-snap-gene-1.12	2.405e-11	52.54	protein:Tk11777 transcript:maker-scaffold119_size3...	[more]
snap_masked-scaffold119_size336447-processed-gene-0.3	4.869e-11	50.85	protein:Tk11770 transcript:snap_masked-scaffold119...	[more]
maker-scaffold850_size89018-snap-gene-0.21	5.018e-11	50.85	protein:Tk01245 transcript:maker-scaffold850_size8...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s1832	supercontig	LSalAtl2s1832:45674..45976 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016
Blast vs. GO	2014-04-02
TblastN vs C. finmarchicus TSA	2014-05-09
Blastp vs. self	2014-05-10
Blastp vs. SwissProt	2017-02-10
Blastp vs. Selected Arthropods	2017-02-20
Blastp vs. NR (2/2017)	2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins	2018-04-18

Properties


Property Name	Value
Logic name	ensemblgenomes
Description	maker-LSalAtl2s1832-snap-gene-0.22
Biotype	protein_coding
Evidence	IEA
Note	Cuticle protein 3 [Lepeophtheirus salmonis]

Cross References

External references for this gene


Database	Accession
Ensembl Metazoa (gene)	EMLSAG00000003347 (primary cross-reference)

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
EMLSAT00000003347	EMLSAT00000003347-699194	Lepeophtheirus salmonis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at LSalAtl2s1832:45674..45976-

gene from alignment at LSalAtl2s1832:45674..45976-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAG00000003347-686113 ID=EMLSAG00000003347-686113|Name=EMLSAG00000003347|organism=Lepeophtheirus salmonis|type=gene|length=303bp|location=Sequence derived from alignment at LSalAtl2s1832:45674..45976- (Lepeophtheirus salmonis)
ATGAAGGGATCTTACGAATATGTTGGCGAAGATGGTCAAAACTACATCGT
TGAATGGGTTGCTGATTAGAATGGATTCCAAGCTTCTGCTGATCATCTCC
CTAAGGAAGTCCCAATCCCATTCTCTGAAATCGCTGAAGCCGTTGCCGCT
CAAATCGCTTTCGCTGCTCAAGAAGATGCTACTGGAAAATTTGCTGCTAC
TGGTGGACTCGGTGGTTCTGCATCTGCTGGTGGATTCCAAGAATCTGTCG
GTGCTTCTGAACAAAGCCAATCTGTTTCTCCCCTTTCCAACTKCAGCCGT
TAA

Add to Basket

Pages

Pages

Pages

Pages

Search form