EMLSAG00000003349, EMLSAG00000003349-686115 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000003349 vs. L. salmonis peptides
Match: EMLSAP00000003349 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1832:479:10635:1 gene:EMLSAG00000003349 transcript:EMLSAT00000003349 description:"augustus_masked-LSalAtl2s1832-processed-gene-0.5") HSP 1 Score: 219.55 bits (558), Expect = 1.211e-74 Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0 Query: 1 MDRILEVPIPFPEIAEAVAAQIAFAAQEDAAGGSGSAGGFGGSAAGGFGQSFGASSQSQSVAPLTQYATTGTAGPDEAPPADPPKDDPPKDEPDPPNEDVTWLKDEADPTCPAP 114 MDRILEVPIPFPEIAEAVAAQIAFAAQEDAAGGSGSAGGFGGSAAGGFGQSFGASSQSQSVAPLTQYATTGTAGPDEAPPADPPKDDPPKDEPDPPNEDVTWLKDEADPTCPAP Sbjct: 1 MDRILEVPIPFPEIAEAVAAQIAFAAQEDAAGGSGSAGGFGGSAAGGFGQSFGASSQSQSVAPLTQYATTGTAGPDEAPPADPPKDDPPKDEPDPPNEDVTWLKDEADPTCPAP 114
BLAST of EMLSAG00000003349 vs. L. salmonis peptides
Match: EMLSAP00000003195 (pep:novel supercontig:LSalAtl2s:LSalAtl2s17743:3:473:1 gene:EMLSAG00000003195 transcript:EMLSAT00000003195 description:"augustus_masked-LSalAtl2s17743-processed-gene-0.0") HSP 1 Score: 66.6254 bits (161), Expect = 7.266e-15 Identity = 47/66 (71.21%), Postives = 52/66 (78.79%), Query Frame = 0 Query: 6 EVPIPFPEIAEAVAAQIAFAAQEDAAGGSGSAGGF----GGSAAGGFGQSFGASSQSQSVAPLTQY 67 +VPIPFPEIAEAV AQIAFAAQEDAA GS +AGG G +AAGGF QSF AS QS+S APL+ Y Sbjct: 88 DVPIPFPEIAEAVEAQIAFAAQEDAAVGSAAAGGXDGLSGSAAAGGFQQSFSASGQSESXAPLSNY 153
BLAST of EMLSAG00000003349 vs. L. salmonis peptides
Match: EMLSAP00000005214 (pep:novel supercontig:LSalAtl2s:LSalAtl2s27587:49:351:-1 gene:EMLSAG00000005214 transcript:EMLSAT00000005214 description:"augustus_masked-LSalAtl2s27587-processed-gene-0.0") HSP 1 Score: 63.5438 bits (153), Expect = 4.181e-14 Identity = 48/62 (77.42%), Postives = 51/62 (82.26%), Query Frame = 0 Query: 6 EVPIPFPEIAEAVAAQIAFAAQEDAAGGSGSAGGFGGS-AAGGFGQSFGASSQSQSVAPLTQ 66 EVPIPFPEIAEAVAAQIAFAAQEDAA GS + GG GS A GGF QSFG S QS+SVAPL+ Sbjct: 36 EVPIPFPEIAEAVAAQIAFAAQEDAALGSATTGGLSGSPAIGGFQQSFGXSGQSESVAPLSN 97
BLAST of EMLSAG00000003349 vs. L. salmonis peptides
Match: EMLSAP00000005388 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2901:64:7290:-1 gene:EMLSAG00000005388 transcript:EMLSAT00000005388 description:"maker-LSalAtl2s2901-snap-gene-0.4") HSP 1 Score: 56.9954 bits (136), Expect = 7.477e-11 Identity = 38/65 (58.46%), Postives = 44/65 (67.69%), Query Frame = 0 Query: 6 EVPIPFPEIAEAVAAQIAFAAQED--AAGGSGSAGGFGGS-AAGGFGQSFGASSQSQSVAPLTQY 67 +V IPFPEIA+AV +QIAFAAQED G+ G F GS GFGQSFG S + SVAPL+ Y Sbjct: 272 DVTIPFPEIADAVESQIAFAAQEDEAGGSGASGTGRFDGSDTVVGFGQSFGVSVNNPSVAPLSSY 336
BLAST of EMLSAG00000003349 vs. L. salmonis peptides
Match: EMLSAP00000004809 (pep:novel supercontig:LSalAtl2s:LSalAtl2s25422:80:397:-1 gene:EMLSAG00000004809 transcript:EMLSAT00000004809 description:"augustus_masked-LSalAtl2s25422-processed-gene-0.0") HSP 1 Score: 54.299 bits (129), Expect = 8.427e-11 Identity = 46/68 (67.65%), Postives = 51/68 (75.00%), Query Frame = 0 Query: 6 EVPIPFPEIAEAVAAQIAFAAQEDAAGGSGSAGG------FGGSAAGGFGQSFGASSQSQSVAPLTQY 67 EVPIPFPEIAEAVAAQIAFAA ED+AG S +AG +AAG F QSFGAS QSQSVA L++Y Sbjct: 36 EVPIPFPEIAEAVAAQIAFAAXEDSAGESAAAGSDEELVDSSVAAAGEFQQSFGASGQSQSVALLSKY 103
BLAST of EMLSAG00000003349 vs. L. salmonis peptides
Match: EMLSAP00000005389 (pep:novel supercontig:LSalAtl2s:LSalAtl2s29058:3:344:-1 gene:EMLSAG00000005389 transcript:EMLSAT00000005389 description:"augustus_masked-LSalAtl2s29058-processed-gene-0.0") HSP 1 Score: 46.2098 bits (108), Expect = 5.960e-8 Identity = 23/25 (92.00%), Postives = 23/25 (92.00%), Query Frame = 0 Query: 6 EVPIPFPEIAEAVAAQIAFAAQEDA 30 EVPIPF EIAEAV AQIAFAAQEDA Sbjct: 89 EVPIPFSEIAEAVEAQIAFAAQEDA 113
BLAST of EMLSAG00000003349 vs. L. salmonis peptides
Match: EMLSAP00000003350 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1832:60402:66509:1 gene:EMLSAG00000003350 transcript:EMLSAT00000003350 description:"maker-LSalAtl2s1832-augustus-gene-0.14") HSP 1 Score: 46.9802 bits (110), Expect = 1.760e-7 Identity = 37/66 (56.06%), Postives = 41/66 (62.12%), Query Frame = 0 Query: 6 EVPIPFPEIAEAVAAQIAFAAQEDAAGGS----GSAGGFGGSAAG----GFGQSF-GASSQSQSVA 62 VPIPF EIAEA+AAQI FA Q A G S GS GFGGSAA G QSF GA+S +V+ Sbjct: 74 HVPIPFSEIAEAIAAQIPFATQGIAVGPSATAIGSHVGFGGSAAADAAVGLRQSFIGAASSGGAVS 139
BLAST of EMLSAG00000003349 vs. nr
Match: gi|155966336|gb|ABU41120.1| (putative cuticle protein, partial [Lepeophtheirus salmonis]) HSP 1 Score: 115.546 bits (288), Expect = 7.193e-30 Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0 Query: 6 EVPIPFPEIAEAVAAQIAFAAQEDAAGGSGSAGGFGGSAAGGFGQSFGASSQSQSVAPLTQY 67 EVPIPFPEIAEAV AQIAFAAQEDAAGGSGSAGGFGGSAAGGFGQSFGASSQSQSVAPLTQY Sbjct: 165 EVPIPFPEIAEAVEAQIAFAAQEDAAGGSGSAGGFGGSAAGGFGQSFGASSQSQSVAPLTQY 226
BLAST of EMLSAG00000003349 vs. nr
Match: gi|225714550|gb|ACO13121.1| (Cuticle protein CP14.6 precursor [Lepeophtheirus salmonis]) HSP 1 Score: 113.62 bits (283), Expect = 3.915e-29 Identity = 60/62 (96.77%), Postives = 61/62 (98.39%), Query Frame = 0 Query: 6 EVPIPFPEIAEAVAAQIAFAAQEDAAGGSGSAGGFGGSAAGGFGQSFGASSQSQSVAPLTQY 67 EVPIPFPEIAEAVAAQIAFAAQEDAAGGSGSAGGFGGSAAGGFGQSFGASSQSQSVAPL+ Y Sbjct: 165 EVPIPFPEIAEAVAAQIAFAAQEDAAGGSGSAGGFGGSAAGGFGQSFGASSQSQSVAPLSNY 226
BLAST of EMLSAG00000003349 vs. nr
Match: gi|225713142|gb|ACO12417.1| (Cuticle protein CP14.6 precursor [Lepeophtheirus salmonis]) HSP 1 Score: 113.62 bits (283), Expect = 3.958e-29 Identity = 60/62 (96.77%), Postives = 61/62 (98.39%), Query Frame = 0 Query: 6 EVPIPFPEIAEAVAAQIAFAAQEDAAGGSGSAGGFGGSAAGGFGQSFGASSQSQSVAPLTQY 67 EVPIPFPEIAEAVAAQIAFAAQEDAAGGSGSAGGFGGSAAGGFGQSFGASSQSQSVAPL+ Y Sbjct: 165 EVPIPFPEIAEAVAAQIAFAAQEDAAGGSGSAGGFGGSAAGGFGQSFGASSQSQSVAPLSNY 226
BLAST of EMLSAG00000003349 vs. nr
Match: gi|225713610|gb|ACO12651.1| (Cuticle protein CP14.6 precursor [Lepeophtheirus salmonis]) HSP 1 Score: 112.079 bits (279), Expect = 1.626e-28 Identity = 60/62 (96.77%), Postives = 60/62 (96.77%), Query Frame = 0 Query: 6 EVPIPFPEIAEAVAAQIAFAAQEDAAGGSGSAGGFGGSAAGGFGQSFGASSQSQSVAPLTQY 67 EVPIPFPEIAEAVAAQIAFAAQEDAAGGS SAGGF GSAAGGFGQSFGASSQSQSVAPLTQY Sbjct: 165 EVPIPFPEIAEAVAAQIAFAAQEDAAGGSTSAGGFSGSAAGGFGQSFGASSQSQSVAPLTQY 226
BLAST of EMLSAG00000003349 vs. nr
Match: gi|155966332|gb|ABU41118.1| (putative cuticle protein [Lepeophtheirus salmonis]) HSP 1 Score: 73.1738 bits (178), Expect = 1.181e-13 Identity = 50/79 (63.29%), Postives = 53/79 (67.09%), Query Frame = 0 Query: 6 EVPIPFPEIAEAVAAQIAFAAQEDAAGGS----GSAGGFGGSAAGGFG-------------QSFGASSQSQSVAPLTQY 67 +VPIPFPEIAEAV AQIAFAAQEDAAGGS GSAGGFGGS A G QSFGAS + SVAPL+ Y Sbjct: 125 DVPIPFPEIAEAVEAQIAFAAQEDAAGGSAGKVGSAGGFGGSVATGGAGGFGGSTGAGGFQQSFGASGNTPSVAPLSSY 203
BLAST of EMLSAG00000003349 vs. nr
Match: gi|290563078|gb|ADD38933.1| (Cuticle protein 3 [Lepeophtheirus salmonis]) HSP 1 Score: 70.8626 bits (172), Expect = 1.116e-12 Identity = 51/63 (80.95%), Postives = 54/63 (85.71%), Query Frame = 0 Query: 6 EVPIPFPEIAEAVAAQIAFAAQEDAAGGSGSAGGFGGS-AAGGFGQSFGASSQSQSVAPLTQY 67 EVPIPFPEIAEAVAAQIAFAAQEDAA GS + GG GS AAGGF QSFGAS QS+SVAPL+ Y Sbjct: 155 EVPIPFPEIAEAVAAQIAFAAQEDAALGSATTGGLSGSPAAGGFQQSFGASGQSESVAPLSNY 217
BLAST of EMLSAG00000003349 vs. nr
Match: gi|155966344|gb|ABU41124.1| (putative cuticle protein, partial [Lepeophtheirus salmonis]) HSP 1 Score: 68.1662 bits (165), Expect = 5.024e-12 Identity = 48/87 (55.17%), Postives = 51/87 (58.62%), Query Frame = 0 Query: 6 EVPIPFPEIAEAVAAQIAFAAQEDAA-GGSGSAGGFGGSAAGGFGQS------------------------FGASSQSQSVAPLTQY 67 EVPIPFPEIAEAV AQIAFAAQEDAA GGS GGF G ++G GQS FGAS+Q QS APLT Y Sbjct: 85 EVPIPFPEIAEAVEAQIAFAAQEDAATGGSSFNGGFQGQSSGFQGQSSGFQGQSSGFQGQSSGFSGLVQQNFGASNQVQSSAPLTSY 171
BLAST of EMLSAG00000003349 vs. nr
Match: gi|290462295|gb|ADD24195.1| (Larval cuticle protein 8 [Lepeophtheirus salmonis]) HSP 1 Score: 67.781 bits (164), Expect = 1.543e-11 Identity = 49/63 (77.78%), Postives = 53/63 (84.13%), Query Frame = 0 Query: 6 EVPIPFPEIAEAVAAQIAFAAQEDAAGGSGSAGGFGGS-AAGGFGQSFGASSQSQSVAPLTQY 67 EVPIPFPEIAEAVAAQIAFAA+EDAA GS + GG GS A GGF QSFGAS QS+SVAPL+ Y Sbjct: 163 EVPIPFPEIAEAVAAQIAFAAREDAAVGSATTGGLSGSPATGGFQQSFGASGQSESVAPLSNY 225
BLAST of EMLSAG00000003349 vs. nr
Match: gi|225713490|gb|ACO12591.1| (Cuticle protein CP14.6 precursor [Lepeophtheirus salmonis]) HSP 1 Score: 61.2326 bits (147), Expect = 5.022e-9 Identity = 59/62 (95.16%), Postives = 60/62 (96.77%), Query Frame = 0 Query: 6 EVPIPFPEIAEAVAAQIAFAAQEDAAGGSGSAGGFGGSAAGGFGQSFGASSQSQSVAPLTQY 67 EVPIPFPEIAEAVAAQIAFAAQEDAAGGS SAGGF GSAAGGFGQSFGASSQSQSVAPLT+Y Sbjct: 165 EVPIPFPEIAEAVAAQIAFAAQEDAAGGSTSAGGFSGSAAGGFGQSFGASSQSQSVAPLTRY 226
BLAST of EMLSAG00000003349 vs. nr
Match: gi|155966118|gb|ABU41014.1| (cuticle protein [Lepeophtheirus salmonis]) HSP 1 Score: 58.9214 bits (141), Expect = 2.805e-8 Identity = 45/79 (56.96%), Postives = 50/79 (63.29%), Query Frame = 0 Query: 6 EVPIPFPEIAEAVAAQIAFAAQEDAAGGSG-----------------SAGGFGGSAAGGFGQSFGASSQSQSVAPLTQY 67 +VPIPFPEIAEAV AQIAFAAQEDAAGGS + G G + AGGF QSFGAS + SVAPL+ Y Sbjct: 125 DVPIPFPEIAEAVEAQIAFAAQEDAAGGSAGKVGSAGGFGGAVATGGAGGFGGSTGAGGFQQSFGASGNTPSVAPLSSY 203 The following BLAST results are available for this feature:
BLAST of EMLSAG00000003349 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000003349 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 0
BLAST of EMLSAG00000003349 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 7
BLAST of EMLSAG00000003349 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000003349 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000003349 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 10
BLAST of EMLSAG00000003349 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1832:479..10635+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000003349-686115 ID=EMLSAG00000003349-686115|Name=EMLSAG00000003349|organism=Lepeophtheirus salmonis|type=gene|length=10157bp|location=Sequence derived from alignment at LSalAtl2s1832:479..10635+ (Lepeophtheirus salmonis)back to top Add to Basket
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