EMLSAG00000003461, EMLSAG00000003461-686227 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000003461
Unique NameEMLSAG00000003461-686227
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
BLAST of EMLSAG00000003461 vs. C. finmarchicus
Match: gi|592784586|gb|GAXK01169982.1| (TSA: Calanus finmarchicus comp1312_c2_seq5 transcribed RNA sequence)

HSP 1 Score: 38.891 bits (89), Expect = 7.457e-3
Identity = 33/154 (21.43%), Postives = 64/154 (41.56%), Query Frame = 0
Query:    8 SYNPNHQRCRRGKYAIKTNTCLPSFSSEELKVINDVQEIGSGVRCITQVIPKCRXXXXXXXXXICYNTYIESSEYSKVETHEISYTNEKKDLLSIDCWEERYKTVGHHHIG---HWFCDSQCKNNHFKVPSQSRPIVKDVTCNGV--TSKKVCI 156
             Y P +  CR    ++    C+P+F+ +   V   V+E+     C  +V+  C +    V ++IC   Y +    +   T +++Y  + + +    C    Y        G   H  C  + +   +KVP  + P+  +V+C       K+VC+
Sbjct:  299 GYAPEY-YCRDTNTSVYAEVCVPAFAEKVTPVTLAVKEVVDNDYCFDRVLTICEETSTTVEREICTYVYEKEEVVAPCTTTQVTYDQKSETMKVTACGAAGYGYGHQQSYGQGEHQVCREEYQTQAYKVPLVTAPL--EVSCMLAYPAPKQVCV 751          
BLAST of EMLSAG00000003461 vs. C. finmarchicus
Match: gi|592784587|gb|GAXK01169981.1| (TSA: Calanus finmarchicus comp1312_c2_seq4 transcribed RNA sequence)

HSP 1 Score: 38.891 bits (89), Expect = 7.580e-3
Identity = 33/154 (21.43%), Postives = 64/154 (41.56%), Query Frame = 0
Query:    8 SYNPNHQRCRRGKYAIKTNTCLPSFSSEELKVINDVQEIGSGVRCITQVIPKCRXXXXXXXXXICYNTYIESSEYSKVETHEISYTNEKKDLLSIDCWEERYKTVGHHHIG---HWFCDSQCKNNHFKVPSQSRPIVKDVTCNGV--TSKKVCI 156
             Y P +  CR    ++    C+P+F+ +   V   V+E+     C  +V+  C +    V ++IC   Y +    +   T +++Y  + + +    C    Y        G   H  C  + +   +KVP  + P+  +V+C       K+VC+
Sbjct:  330 GYAPEY-YCRDTNTSVYAEVCVPAFAEKVTPVTLAVKEVVDNDYCFDRVLTICEETSTTVEREICTYVYEKEEVVAPCTTTQVTYDQKSETMKVTACGAAGYGYGHQQSYGQGEHQVCREEYQTQAYKVPLVTAPL--EVSCMLAYPAPKQVCV 782          
BLAST of EMLSAG00000003461 vs. C. finmarchicus
Match: gi|592784590|gb|GAXK01169978.1| (TSA: Calanus finmarchicus comp1312_c2_seq1 transcribed RNA sequence)

HSP 1 Score: 38.891 bits (89), Expect = 1.002e-2
Identity = 33/154 (21.43%), Postives = 64/154 (41.56%), Query Frame = 0
Query:    8 SYNPNHQRCRRGKYAIKTNTCLPSFSSEELKVINDVQEIGSGVRCITQVIPKCRXXXXXXXXXICYNTYIESSEYSKVETHEISYTNEKKDLLSIDCWEERYKTVGHHHIG---HWFCDSQCKNNHFKVPSQSRPIVKDVTCNGV--TSKKVCI 156
             Y P +  CR    ++    C+P+F+ +   V   V+E+     C  +V+  C +    V ++IC   Y +    +   T +++Y  + + +    C    Y        G   H  C  + +   +KVP  + P+  +V+C       K+VC+
Sbjct:  878 GYAPEY-YCRDTNTSVYAEVCVPAFAEKVTPVTLAVKEVVDNDYCFDRVLTICEETSTTVEREICTYVYEKEEVVAPCTTTQVTYDQKSETMKVTACGAAGYGYGHQQSYGQGEHQVCREEYQTQAYKVPLVTAPL--EVSCMLAYPAPKQVCV 1330          
BLAST of EMLSAG00000003461 vs. C. finmarchicus
Match: gi|592949113|gb|GAXK01009440.1| (TSA: Calanus finmarchicus comp1525631_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 36.1946 bits (82), Expect = 6.261e-2
Identity = 30/141 (21.28%), Postives = 59/141 (41.84%), Query Frame = 0
Query:   16 CRRGKYAIKTNTCLPSFSSEELKVINDVQEIGSGVRCITQVIPKCRXXXXXXXXXICYNTYIESSEYSKVETHEISYTNEKKDLLSIDCWEERYKTVGHHHIGHWFCDSQCKNNHFKVPSQSRPIVKDVTCNGVTSKKVCI 156
            CR    +I    C P F+ E+    N V+ +     C  +V   C++    + ++IC   Y      +   + +I++    + +    C    Y  +G++   H +C  + +   +KVP  + P+V     +    K+VCI
Sbjct:  293 CRNTNTSIYAEVCSPDFAEEDSPNENKVKIVVDDNYCFDEVTTVCKESVSEIEREICTYEYTREEVATDCTSTKITFEERSESMKQTTCSPSGYGNLGYNAGDHQYCREEVQTQAYKVPVVTVPVVGSCMLSYPAPKRVCI 715          
BLAST of EMLSAG00000003461 vs. C. finmarchicus
Match: gi|592765936|gb|GAXK01188632.1| (TSA: Calanus finmarchicus comp592122_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 31.9574 bits (71), Expect = 1.413e+0
Identity = 38/185 (20.54%), Postives = 68/185 (36.76%), Query Frame = 0
Query:    2 IPVLIGSYNPNH---------QRCRRGKYAIKTNTCLPSFSSEELKVINDVQEIGSGVRCITQVIPKCRXXXXXXXXXICYNTYIESSEYSKVETHEISYTNEKKDLLSIDCWEERYKTVGHHH------------------------IGHWFCDSQCKNNHFKVPSQSRPIVKDVTCNGVTSKK 153
            IPV+  + +P H         QRC   +  +    C P+   +   V    + I +   C+  V   C + ++VV+  +CY  Y    + +K  T E+ +     D     C +++Y   GH                          +G+   + +C+N   K+P         V C+ V+ KK
Sbjct:  324 IPVISHASSPGHVHHSSILTDQRCHIEEVELYAEVCTPTIERDCEDVKVKTRTIQTREDCVEVVRTVCTETEEVVDNMVCYYVYNMEKQEAKATTVEVQFDQNCVDETQKVCPKQKYGGYGHQGHCKEVKNEICYNVPKVNPSETTVTVGYPVPEKKCENKQVKLPK--------VKCDEVSEKK 854          
BLAST of EMLSAG00000003461 vs. C. finmarchicus
Match: gi|592765937|gb|GAXK01188631.1| (TSA: Calanus finmarchicus comp592122_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 31.9574 bits (71), Expect = 1.415e+0
Identity = 38/185 (20.54%), Postives = 68/185 (36.76%), Query Frame = 0
Query:    2 IPVLIGSYNPNH---------QRCRRGKYAIKTNTCLPSFSSEELKVINDVQEIGSGVRCITQVIPKCRXXXXXXXXXICYNTYIESSEYSKVETHEISYTNEKKDLLSIDCWEERYKTVGHHH------------------------IGHWFCDSQCKNNHFKVPSQSRPIVKDVTCNGVTSKK 153
            IPV+  + +P H         QRC   +  +    C P+   +   V    + I +   C+  V   C + ++VV+  +CY  Y    + +K  T E+ +     D     C +++Y   GH                          +G+   + +C+N   K+P         V C+ V+ KK
Sbjct:  330 IPVISHASSPGHVHHSSILTDQRCHIEEVELYAEVCTPTIERDCEDVKVKTRTIQTREDCVEVVRTVCTETEEVVDNMVCYYVYNMEKQEAKATTVEVQFDQNCVDETQKVCPKQKYGGYGHQGHCKEVKNEICYNVPKVNPSETTVTVGYPVPEKKCENKQVKLPK--------VKCDEVSEKK 860          
BLAST of EMLSAG00000003461 vs. C. finmarchicus
Match: gi|592929853|gb|GAXK01028692.1| (TSA: Calanus finmarchicus comp281749_c2_seq1 transcribed RNA sequence)

HSP 1 Score: 31.5722 bits (70), Expect = 2.623e+0
Identity = 19/59 (32.20%), Postives = 29/59 (49.15%), Query Frame = 0
Query:   99 LLSIDCWEERYKTVGHHHIGHWFCDSQCKN--NHFKVPSQSRPIVKDVTCNGVTSKKVC 155
            L S +C  +    + HH I H+F DSQC +   +F V   +RP+   + C+ V     C
Sbjct: 3277 LFSSNCPLQFADEISHHIISHFFQDSQCSSPEEYFCV---TRPVSFRIKCSCVLDDNFC 3444          
BLAST of EMLSAG00000003461 vs. C. finmarchicus
Match: gi|592947328|gb|GAXK01011225.1| (TSA: Calanus finmarchicus comp23062_c1_seq3 transcribed RNA sequence)

HSP 1 Score: 30.8018 bits (68), Expect = 3.585e+0
Identity = 37/182 (20.33%), Postives = 74/182 (40.66%), Query Frame = 0
Query:    2 IPVLIGSYNPNH---------QRCRRGKYAIKTNTCLPSFSSEELKVINDVQEIGSGVRCITQVIPKCRXXXXXXXXXICYNTYIESSEYSKVETHEISYTNEKKDLLSIDCWEERY------KTVGHH---------------HIGHWFCDSQCKNNHFKVPSQSRPIVKDVTCNGVTSKK 153
            IPV+     P+H         Q+C   +  +    C P+   +  KV    Q I +   C+  V   C + +++V+ ++CY  Y +  + ++  T ++ Y  + ++     C E++Y      KTV +                 +G+   + +C+N   K+P         V C+ V+ +K
Sbjct:  369 IPVITHPSTPDHGGHTAVLTDQKCHIEEVELYAEVCTPTIERDCKKVKVKTQAINAKEDCVKIVRTVCTETEELVDNEVCYYVYNKEKQEAEATTVKVEYETKCEEETQKVCPEQQYGHQGYCKTVKNQVCYNVPVVSPDKTGVTVGYPVPEKKCENKPVKLPK--------VKCDEVSEEK 890          
BLAST of EMLSAG00000003461 vs. C. finmarchicus
Match: gi|592947327|gb|GAXK01011226.1| (TSA: Calanus finmarchicus comp23062_c1_seq4 transcribed RNA sequence)

HSP 1 Score: 30.4166 bits (67), Expect = 4.067e+0
Identity = 37/182 (20.33%), Postives = 74/182 (40.66%), Query Frame = 0
Query:    2 IPVLIGSYNPNH---------QRCRRGKYAIKTNTCLPSFSSEELKVINDVQEIGSGVRCITQVIPKCRXXXXXXXXXICYNTYIESSEYSKVETHEISYTNEKKDLLSIDCWEERY------KTVGHH---------------HIGHWFCDSQCKNNHFKVPSQSRPIVKDVTCNGVTSKK 153
            IPV+     P+H         Q+C   +  +    C P+   +  KV    Q I +   C+  V   C + +++V+ ++CY  Y +  + ++  T ++ Y  + ++     C E++Y      KTV +                 +G+   + +C+N   K+P         V C+ V+ +K
Sbjct:  297 IPVITHPSTPDHGGHTAVLTDQKCHIEEVELYAEVCTPTIERDCKKVKVKTQAINAKEDCVKIVRTVCTETEELVDNEVCYYVYNKEKQEAEATTVKVEYETKCEEETQKVCPEQQYGHQGYCKTVKNQVCYNVPVVSPDKTGVTVGYPVPEKKCENKPVKLPK--------VKCDEVSEEK 818          
BLAST of EMLSAG00000003461 vs. C. finmarchicus
Match: gi|592784584|gb|GAXK01169984.1| (TSA: Calanus finmarchicus comp1312_c2_seq7 transcribed RNA sequence)

HSP 1 Score: 29.6462 bits (65), Expect = 4.966e+0
Identity = 26/109 (23.85%), Postives = 46/109 (42.20%), Query Frame = 0
Query:  104 CWEERYKTVGHHHIGHWFCDSQCKNNHFKVPSQSRPIVKDVTCNGVTSKKVCIPYXXXXXXXXXXXXXXXXXXTINTLVHRNATYHHSNYELTKPRCTWRRLILHYKKC 212
            C    Y + G+ H  H +C  + +   +KVP  + P+ +  +      K+VC+   IE+ E  C+++   KC  +   V    T       + +P C    L L  + C
Sbjct:  131 CGASGYGSPGYGHGEHQYCREEYQTQAYKVPLVTVPLEQSCSLAYPAPKQVCVTKAIEITEVKCEDKVENKCFNVAKFVDATNTVDQKEVIIGEPSCEQITLTLPTQSC 457          
BLAST of EMLSAG00000003461 vs. L. salmonis peptides
Match: EMLSAP00000003461 (pep:novel supercontig:LSalAtl2s:LSalAtl2s18:1046240:1047427:1 gene:EMLSAG00000003461 transcript:EMLSAT00000003461 description:"maker-LSalAtl2s18-augustus-gene-11.13")

HSP 1 Score: 442.58 bits (1137), Expect = 3.623e-159
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0
Query:    1 MIPVLIGSYNPNHQRCRRGKYAIKTNTCLPSFSSEELKVINDVQEIGSGVRCITQVIPKCRKVKKVVNKKICYNTYIESSEYSKVETHEISYTNEKKDLLSIDCWEERYKTVGHHHIGHWFCDSQCKNNHFKVPSQSRPIVKDVTCNGVTSKKVCIPYKIELEENVCKEEKVKKCITINTLVHRNATYHHSNYELTKPRCTWRRLILHYKKCDSKQY 217
            MIPVLIGSYNPNHQRCRRGKYAIKTNTCLPSFSSEELKVINDVQEIGSGVRCITQVIPKCRKVKKVVNKKICYNTYIESSEYSKVETHEISYTNEKKDLLSIDCWEERYKTVGHHHIGHWFCDSQCKNNHFKVPSQSRPIVKDVTCNGVTSKKVCIPYKIELEENVCKEEKVKKCITINTLVHRNATYHHSNYELTKPRCTWRRLILHYKKCDSKQY
Sbjct:    1 MIPVLIGSYNPNHQRCRRGKYAIKTNTCLPSFSSEELKVINDVQEIGSGVRCITQVIPKCRKVKKVVNKKICYNTYIESSEYSKVETHEISYTNEKKDLLSIDCWEERYKTVGHHHIGHWFCDSQCKNNHFKVPSQSRPIVKDVTCNGVTSKKVCIPYKIELEENVCKEEKVKKCITINTLVHRNATYHHSNYELTKPRCTWRRLILHYKKCDSKQY 217          
BLAST of EMLSAG00000003461 vs. L. salmonis peptides
Match: EMLSAP00000003483 (pep:novel supercontig:LSalAtl2s:LSalAtl2s18:977233:1016052:1 gene:EMLSAG00000003483 transcript:EMLSAT00000003483 description:"maker-LSalAtl2s18-augustus-gene-10.7")

HSP 1 Score: 58.151 bits (139), Expect = 2.733e-10
Identity = 40/171 (23.39%), Postives = 73/171 (42.69%), Query Frame = 0
Query:   16 CRRGKYAIKTNTCLPSFSSEELKVINDVQEIGSGVRCITQVIPKCRKVKKVVNKKICYNTYIESSEYSKVETHEISYTNEKKDLLSIDCWEERYKTVGHHHIG----HWFCDSQCKNNHFKVPSQSRPIVKDVTCNGVTSKKVCIPYKIELEENVCKEEKVKKCITINTLV 182
            CR    +I  + C PS + E++ V  +V+ +     C  QV   C +  + V+++IC  TY +  E       +++Y   K + + +          GH+       H  C  + +   + VP    P+   V  +    KK+C+   I++ E VC + K +KC  +   V
Sbjct:  137 CRDTNTSIYADVCTPSIAVEQVPVERNVKNVQDNEYCYEQVRTVCEETSRSVDREICTYTYEQKPETLSATXTQVTYET-KSETMKVTTCSAAAPAYGHYAPAKPEEHQXCREEYQTQSYSVPLVDTPLEVPVELSVPEPKKICVTKAIQINEVVCNDIKERKCFNVAITV 306          
BLAST of EMLSAG00000003461 vs. nr
Match: gi|155966286|gb|ABU41096.1| (hypothetical protein [Lepeophtheirus salmonis])

HSP 1 Score: 66.2402 bits (160), Expect = 5.616e-10
Identity = 46/192 (23.96%), Postives = 81/192 (42.19%), Query Frame = 0
Query:   30 PSFSSEELKVINDVQEIGSGVRCITQVIPKCRKVKKVVNKKICYNTYIESSEYSKVETHEISYTNEKKDLLSIDCWEERYKTVGHHHIG----HWFCDSQCKNNHFKVPSQSRPIVKDVTCNGVTSKKVCIPYKIELEENVCKEEKVKKCITINTLVHRNATYHHSNYELTKPRCTWRRLILHYKKCDSKQY 217
            PS + E++ V  +V+ +     C  QV   C +  + V+++IC  TY +  E     T +++Y   K + + +          GH+       H +C  + +   + VP    P+   V  +    KK+C+   I++ E VC + K +KC  +   V    T   S  +L +P C    L L  + C    Y
Sbjct:    5 PSIAVEQVPVERNVKNVQDNEYCYEQVRTVCEETSRSVDREICTYTYEQKPETLSATTTQVTYET-KSETMKVTTCSAAAPAYGHYAPAKPEEHQYCREEYQTQSYSVPLVDTPLEVPVELSVPEPKKICVTKAIQINEVVCNDIKERKCFNVAITVDAVETVEQSEVKLGEPDCNTVTLTLPTQACSKPGY 195          
BLAST of EMLSAG00000003461 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold72_size415059-snap-gene-0.11 (protein:Tk08662 transcript:maker-scaffold72_size415059-snap-gene-0.11-mRNA-1 annotation:"hypothetical protein")

HSP 1 Score: 72.4034 bits (176), Expect = 1.013e-15
Identity = 50/203 (24.63%), Postives = 86/203 (42.36%), Query Frame = 0
Query:   16 CRRGKYAIKTNTCLPSFSSEELKVINDVQEIGSGVRCITQVIPKCRKVKKVVNKKICYNTYIESSEYSKVETHEISYTNEKKDLLSIDCWEERYKTVGHHHIG---HWFCDSQCKNNHFKVPSQSRPIVKDVTCNGVTSKKVCIPYKIELEENVCKEEKVKKCITINTLVHRNATYHHSNYELTKPRCTWRRLILHYKKCDSK 215
            CR    +I    C+P F++E   V  DV++      C TQ   +C +  K V ++IC   Y++  E     T +++Y  + + +    C    Y   G +H G   H +C  + +   + VP    P+   V        K C+   + + E VCK+ + +KCI++  L     +   S   L +P C    L L  + C  +
Sbjct:   30 CRDTNTSIYAEVCVPGFTNEVQPVELDVKKAADDEYCFTQTKTECEETTKNVEREICSYNYVQKKETLSATTTQVTYEKKSETMKVTSCKPAGY---GSNHYGSGDHQYCSEEYQTQEYSVPKVDTPVEVPVETAIPEPIKECVLKTLTITEVVCKDVETQKCISLTKLEEAKESVDTSQVILGEPNCKQITLTLPTEACSEQ 229          
BLAST of EMLSAG00000003461 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold72_size415059-snap-gene-0.12 (protein:Tk08663 transcript:maker-scaffold72_size415059-snap-gene-0.12-mRNA-1 annotation:"dmx-like protein 1")

HSP 1 Score: 71.2478 bits (173), Expect = 2.712e-15
Identity = 49/203 (24.14%), Postives = 85/203 (41.87%), Query Frame = 0
Query:   16 CRRGKYAIKTNTCLPSFSSEELKVINDVQEIGSGVRCITQVIPKCRKVKKVVNKKICYNTYIESSEYSKVETHEISYTNEKKDLLSIDCWEERYKTVGHHHIG---HWFCDSQCKNNHFKVPSQSRPIVKDVTCNGVTSKKVCIPYKIELEENVCKEEKVKKCITINTLVHRNATYHHSNYELTKPRCTWRRLILHYKKCDSK 215
            CR    +I    C+P F++E   V  DV++      C TQ   +C +  K V ++IC   Y++  E     T +++Y  + + +    C    Y   G +H G   H +C  + +   + VP    P+   V        K C+   + + E VC + + +KCI++  L     +   S   L +P C    L L  + C  +
Sbjct:   30 CRDTNTSIYAEVCVPGFTNEVQPVELDVKKAADDEYCFTQTKTECEETTKNVEREICSYNYVQKKETRSATTTQVTYEKKSETMKVTSCKPAGY---GSNHYGSGDHQYCSEEYQTQEYSVPKVDTPVEVPVETAIPEPVKECVLKTLAITEVVCMDVETQKCISLTKLEEAKESVDTSQVILGEPNCKQITLTLPTEACSEQ 229          
BLAST of EMLSAG00000003461 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold72_size415059-snap-gene-0.10 (protein:Tk08661 transcript:maker-scaffold72_size415059-snap-gene-0.10-mRNA-1 annotation:"dna polymerase i (pol i)")

HSP 1 Score: 70.4774 bits (171), Expect = 3.734e-15
Identity = 49/203 (24.14%), Postives = 85/203 (41.87%), Query Frame = 0
Query:   16 CRRGKYAIKTNTCLPSFSSEELKVINDVQEIGSGVRCITQVIPKCRKVKKVVNKKICYNTYIESSEYSKVETHEISYTNEKKDLLSIDCWEERYKTVGHHHIG---HWFCDSQCKNNHFKVPSQSRPIVKDVTCNGVTSKKVCIPYKIELEENVCKEEKVKKCITINTLVHRNATYHHSNYELTKPRCTWRRLILHYKKCDSK 215
            CR    +I    C+P F++E   V  DV++      C TQ   +C +  K V ++IC   Y++  E     T +++Y  + + +    C    Y   G +H G   H +C  + +   + VP    P+   V        K C+   + + E VC + + +KCI++  L     +   S   L +P C    L L  + C  +
Sbjct:   24 CRDTNTSIYAEVCVPGFTNEVQPVELDVKKAADDEYCFTQTKTECEETTKNVEREICSYNYVQKKETLSATTTQVTYEKKSETMKVTSCKPAGY---GSNHYGSGDHQYCSEEYQTQEYSVPKVDTPVEVPVETAIPEPVKECVLKTLAITEVVCMDVETQKCISLTKLEEAKESVDTSQVILGEPNCKQITLTLPTEACSEQ 223          
The following BLAST results are available for this feature:
BLAST of EMLSAG00000003461 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003461 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 11
Match NameE-valueIdentityDescription
gi|592784586|gb|GAXK01169982.1|7.457e-321.43TSA: Calanus finmarchicus comp1312_c2_seq5 transcr... [more]
gi|592784587|gb|GAXK01169981.1|7.580e-321.43TSA: Calanus finmarchicus comp1312_c2_seq4 transcr... [more]
gi|592784590|gb|GAXK01169978.1|1.002e-221.43TSA: Calanus finmarchicus comp1312_c2_seq1 transcr... [more]
gi|592949113|gb|GAXK01009440.1|6.261e-221.28TSA: Calanus finmarchicus comp1525631_c0_seq1 tran... [more]
gi|592765936|gb|GAXK01188632.1|1.413e+020.54TSA: Calanus finmarchicus comp592122_c0_seq2 trans... [more]
gi|592765937|gb|GAXK01188631.1|1.415e+020.54TSA: Calanus finmarchicus comp592122_c0_seq1 trans... [more]
gi|592929853|gb|GAXK01028692.1|2.623e+032.20TSA: Calanus finmarchicus comp281749_c2_seq1 trans... [more]
gi|592947328|gb|GAXK01011225.1|3.585e+020.33TSA: Calanus finmarchicus comp23062_c1_seq3 transc... [more]
gi|592947327|gb|GAXK01011226.1|4.067e+020.33TSA: Calanus finmarchicus comp23062_c1_seq4 transc... [more]
gi|592784584|gb|GAXK01169984.1|4.966e+023.85TSA: Calanus finmarchicus comp1312_c2_seq7 transcr... [more]

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BLAST of EMLSAG00000003461 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAP000000034613.623e-159100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s18:104624... [more]
EMLSAP000000034832.733e-1023.39pep:novel supercontig:LSalAtl2s:LSalAtl2s18:977233... [more]
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BLAST of EMLSAG00000003461 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003461 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003461 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 1
Match NameE-valueIdentityDescription
gi|155966286|gb|ABU41096.1|5.616e-1023.96hypothetical protein [Lepeophtheirus salmonis][more]
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BLAST of EMLSAG00000003461 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 3
Match NameE-valueIdentityDescription
maker-scaffold72_size415059-snap-gene-0.111.013e-1524.63protein:Tk08662 transcript:maker-scaffold72_size41... [more]
maker-scaffold72_size415059-snap-gene-0.122.712e-1524.14protein:Tk08663 transcript:maker-scaffold72_size41... [more]
maker-scaffold72_size415059-snap-gene-0.103.734e-1524.14protein:Tk08661 transcript:maker-scaffold72_size41... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s18supercontigLSalAtl2s18:1046240..1047427 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s18-augustus-gene-11.13
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000003461 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000003461EMLSAT00000003461-699308Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s18:1046240..1047427+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000003461-686227 ID=EMLSAG00000003461-686227|Name=EMLSAG00000003461|organism=Lepeophtheirus salmonis|type=gene|length=1188bp|location=Sequence derived from alignment at LSalAtl2s18:1046240..1047427+ (Lepeophtheirus salmonis)
ACTCAGAGCCTAATAGTTATTCTAATGATTCCTGTACTAATTGGCTCATA TAATCCTAATCATCAGAGGTGTCGAAGAGGAAAATATGCAATCAAAACCA ATACTTGTCTACCCTCTTTCAGTTCTGAGGAACTCAAAGTTATCAATGAT GTTCAGGAAATAGGTTCAGGCGTACGCTGTATTACACAAGTGATTCCAAA ATGTAGAAAAGTAAAAAAAGTTGTCAATAAGAAGATTTGTTATAACACTT ATATAGAGTCTTCAGAATATTCAAAAGTAGAAACACATGAGGTGAGTTAT TTAACTGTTTTGGTATCTAATTAAACTTGTGATTTCTTTTATGCAGATAT CCTATACAAATGAAAAGAAAGATCTTCTCTCAATTGACTGCTGGGAGGAA CGCTATAAAACCGTTGGACATCATCACATAGGCCATTGGTTTTGTGACTC TCAATGTAAAAATAATCATTTCAAAGTACCATCACAATCCAGGCCGATTG TGAAAGATGTGACCTGCAATGGAGTAACCTCAAAGAAGGTTTGCATTCCT TATAAAATCGAATTAGAAGAAAACGTTTGTAAGGAAGAAAAAGTGAAGAA ATGCATCACGATAAACACATTAGTTCATCGTAACGCTACGTATCATCACA GTAACTACGAGCTTACAAAGCCTAGGTGTACATGGAGACGGCTCATACTT CATTATAAAAAATGCGATTCAAAACAATATTAGTTTTTAACGGATTAAAA AACAAACATATTTGAAGGGGGAAAAAAGATTTTTATACAAATAAAGTTTT GCATTTACAATTCATTGATTATTGGCAACATTTCTTTCAATACGTTTTCA TTTCCCATTAGGAATGACAAAAAAAAAACTAGTTTTTTCATTTTTGAAAA TGTCTAAGTCTCAAAGAAATTAAATCGTGTTTAAATTTATTATTTAAAAT CTAATGGGATGTCTCAAGTTACTCCCTCTCATATCATAAATTTCTAAATT GCTTAAAAATATTGTTAATACCCTTCGTTTATTTTGAGAAGAATATGCCT TAAAGGATTTATCATTGTGTATAGACAAAGTTGTTTCATTTTATCTATCA ATGAGGCGTAAAATAAGGGGGGAGACCGTTCTAGGACATTTACTCCTCGC AAAACTATTATCCCATACCACCAACTCCAATAATTACC
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