EMLSAG00000003535, EMLSAG00000003535-686301 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000003535
Unique NameEMLSAG00000003535-686301
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of EMLSAG00000003535 vs. GO
Match: - (symbol:RPS3A "Ribosomal protein S3A, isoform CRA_e" species:9606 "Homo sapiens" [GO:0003735 "structural constituent of ribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA] InterPro:IPR001593 Pfam:PF01015 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:CH471056 HOGENOM:HOG000105220 EMBL:AC095055 UniGene:Hs.356572 HGNC:HGNC:10421 ProteinModelPortal:D6R9B6 SMR:D6R9B6 PRIDE:D6R9B6 Ensembl:ENST00000509736 NextBio:35492898 ArrayExpress:D6R9B6 Uniprot:D6R9B6)

HSP 1 Score: 53.9138 bits (128), Expect = 2.456e-9
Identity = 26/62 (41.94%), Postives = 34/62 (54.84%), Query Frame = 0 
Query:   11 FVKKWKFLIEANADVLKKPRFNLNKLMDLHGEDQWKNHNYDPSAGETIERPEGYEPPVEQEI 72
            FV+K K L        KKP+F L KLM+LHGE            G  +ER +GYEPPV++ +
Sbjct:   92 FVRKVKML--------KKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 145
[Close]
BLAST of EMLSAG00000003535 vs. GO
Match: - (symbol:RPS3A "40S ribosomal protein S3a" species:9615 "Canis lupus familiaris" [GO:0002181 "cytoplasmic translation" evidence=IBA] [GO:0003735 "structural constituent of ribosome" evidence=IBA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IBA] [GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA] HAMAP:MF_03122 InterPro:IPR001593 InterPro:IPR027500 Pfam:PF01015 GO:GO:0005634 GO:GO:0030154 GO:GO:0006412 GO:GO:0003735 GO:GO:0022627 GeneTree:ENSGT00390000018433 OrthoDB:EOG7Q5HDW TreeFam:TF300037 OMA:MRITARM EMBL:AAEX03001497 Ensembl:ENSCAFT00000012390 Uniprot:J9P853)

HSP 1 Score: 54.6842 bits (130), Expect = 4.207e-9
Identity = 27/65 (41.54%), Postives = 36/65 (55.38%), Query Frame = 0 
Query:    8 LRSFVKKWKFLIEANADVLKKPRFNLNKLMDLHGEDQWKNHNYDPSAGETIERPEGYEPPVEQEI 72
            L  FV+K K        +LKKP+F L KLM+LHGE            G  +ER +GYEPPV++ +
Sbjct:  207 LHVFVRKVK--------MLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 263
[Close]
BLAST of EMLSAG00000003535 vs. GO
Match: - (symbol:RPS3A "40S ribosomal protein S3a" species:9606 "Homo sapiens" [GO:0003735 "structural constituent of ribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA] HAMAP:MF_03122 InterPro:IPR001593 InterPro:IPR027500 Pfam:PF01015 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:AC095055 HGNC:HGNC:10421 ProteinModelPortal:H0Y9Y4 PRIDE:H0Y9Y4 Ensembl:ENST00000515792 NextBio:35520875 ArrayExpress:H0Y9Y4 Bgee:H0Y9Y4 Uniprot:H0Y9Y4)

HSP 1 Score: 53.9138 bits (128), Expect = 4.296e-9
Identity = 26/62 (41.94%), Postives = 35/62 (56.45%), Query Frame = 0 
Query:   11 FVKKWKFLIEANADVLKKPRFNLNKLMDLHGEDQWKNHNYDPSAGETIERPEGYEPPVEQEI 72
            FV+K K        +LKKP+F L KLM+LHGE            G  +ER +GYEPPV++ +
Sbjct:  155 FVRKVK--------MLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 208
[Close]
BLAST of EMLSAG00000003535 vs. GO
Match: - (symbol:RpS3A "Ribosomal protein S3A" species:7227 "Drosophila melanogaster" [GO:0003735 "structural constituent of ribosome" evidence=ISS;NAS] [GO:0022627 "cytosolic small ribosomal subunit" evidence=ISS;NAS] [GO:0006412 "translation" evidence=ISS;NAS] [GO:0022626 "cytosolic ribosome" evidence=NAS] [GO:0048477 "oogenesis" evidence=NAS] [GO:0000022 "mitotic spindle elongation" evidence=IMP] [GO:0007052 "mitotic spindle organization" evidence=IMP] HAMAP:MF_03122 InterPro:IPR001593 InterPro:IPR018281 InterPro:IPR027500 Pfam:PF01015 PROSITE:PS01191 GO:GO:0007275 GO:GO:0030154 GO:GO:0048477 GO:GO:0003735 GO:GO:0002181 EMBL:AE014135 GO:GO:0000022 PDB:3J38 PDBsum:3J38 GO:GO:0022627 eggNOG:COG1890 KO:K02984 GeneTree:ENSGT00390000018433 CTD:6189 OrthoDB:EOG7Q5HDW EMBL:Y10115 EMBL:AF034971 EMBL:AY070949 EMBL:BT083412 EMBL:BT125801 EMBL:BT132838 RefSeq:NP_001245404.1 RefSeq:NP_524618.1 RefSeq:NP_726518.1 UniGene:Dm.31437 UniGene:Dm.6768 ProteinModelPortal:P55830 SMR:P55830 BioGrid:68606 IntAct:P55830 MINT:MINT-923192 PaxDb:P55830 PRIDE:P55830 EnsemblMetazoa:FBtr0089175 EnsemblMetazoa:FBtr0308296 GeneID:43768 KEGG:dme:Dmel_CG2168 FlyBase:FBgn0017545 InParanoid:Q8IMB0 OMA:MRITARM PhylomeDB:P55830 ChiTaRS:RPS3A GenomeRNAi:43768 NextBio:835682 PRO:PR:P55830 Bgee:P55830 Uniprot:P55830)

HSP 1 Score: 53.9138 bits (128), Expect = 8.144e-9
Identity = 25/49 (51.02%), Postives = 36/49 (73.47%), Query Frame = 0 
Query:   25 VLKKPRFNLNKLMDLHGEDQWKN-HNYDPSAGETIERPEGYEPPVEQEI 72
            VLKKPRF+++KL++LHG+   K+      S G  I+RPEGYEPPV++ +
Sbjct:  220 VLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAVIDRPEGYEPPVQEAV 268
[Close]
BLAST of EMLSAG00000003535 vs. GO
Match: - (symbol:Rps3a "40S ribosomal protein S3a" species:10116 "Rattus norvegicus" [GO:0002181 "cytoplasmic translation" evidence=IBA] [GO:0003735 "structural constituent of ribosome" evidence=IBA] [GO:0005634 "nucleus" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0006412 "translation" evidence=ISS] [GO:0030154 "cell differentiation" evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=ISS] [GO:0031369 "translation initiation factor binding" evidence=IPI] [GO:0043066 "negative regulation of apoptotic process" evidence=ISS] HAMAP:MF_03122 InterPro:IPR001593 InterPro:IPR018281 InterPro:IPR027500 Pfam:PF01015 PROSITE:PS01191 RGD:62078 GO:GO:0005634 GO:GO:0043066 GO:GO:0030154 GO:GO:0003735 GO:GO:0002181 GO:GO:0022627 eggNOG:COG1890 HOGENOM:HOG000105220 KO:K02984 OMA:GQNAYTK GeneTree:ENSGT00390000018433 CTD:6189 HOVERGEN:HBG000783 OrthoDB:EOG7Q5HDW TreeFam:TF300037 EMBL:M84716 EMBL:X75161 EMBL:BC058483 PIR:JC5250 RefSeq:NP_058849.1 UniGene:Rn.94935 BioGrid:247958 IntAct:P49242 MINT:MINT-4569153 PhosphoSite:P49242 PaxDb:P49242 PRIDE:P49242 Ensembl:ENSRNOT00000016329 GeneID:29288 KEGG:rno:29288 UCSC:RGD:62078 InParanoid:P49242 NextBio:608681 PRO:PR:P49242 Genevestigator:P49242 Uniprot:P49242)

HSP 1 Score: 53.9138 bits (128), Expect = 8.665e-9
Identity = 26/62 (41.94%), Postives = 35/62 (56.45%), Query Frame = 0 
Query:   11 FVKKWKFLIEANADVLKKPRFNLNKLMDLHGEDQWKNHNYDPSAGETIERPEGYEPPVEQEI 72
            FV+K K        +LKKP+F L KLM+LHGE            G  +ER +GYEPPV++ +
Sbjct:  211 FVRKVK--------MLKKPKFELGKLMELHGEGGSSGKTTGDETGAKVERADGYEPPVQESV 264
[Close]
BLAST of EMLSAG00000003535 vs. GO
Match: - (symbol:Rps3a "ribosomal protein S3a" species:10116 "Rattus norvegicus" [GO:0002181 "cytoplasmic translation" evidence=IBA] [GO:0003674 "molecular_function" evidence=ND] [GO:0003735 "structural constituent of ribosome" evidence=IBA] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO;ISS] [GO:0006412 "translation" evidence=ISO;ISS] [GO:0008150 "biological_process" evidence=ND] [GO:0022627 "cytosolic small ribosomal subunit" evidence=ISO;IDA] [GO:0030154 "cell differentiation" evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=ISO;ISS] [GO:0031369 "translation initiation factor binding" evidence=IPI] [GO:0043066 "negative regulation of apoptotic process" evidence=ISO;ISS] [GO:0044822 "poly(A) RNA binding" evidence=ISO] [GO:0070062 "extracellular vesicular exosome" evidence=ISO] HAMAP:MF_03122 InterPro:IPR001593 InterPro:IPR018281 InterPro:IPR027500 Pfam:PF01015 PROSITE:PS01191 RGD:62078 GO:GO:0005634 GO:GO:0043066 GO:GO:0030154 GO:GO:0003735 GO:GO:0002181 GO:GO:0022627 eggNOG:COG1890 HOGENOM:HOG000105220 KO:K02984 OMA:GQNAYTK GeneTree:ENSGT00390000018433 CTD:6189 HOVERGEN:HBG000783 OrthoDB:EOG7Q5HDW TreeFam:TF300037 EMBL:M84716 EMBL:X75161 EMBL:BC058483 PIR:JC5250 RefSeq:NP_058849.1 UniGene:Rn.94935 BioGrid:247958 IntAct:P49242 MINT:MINT-4569153 PhosphoSite:P49242 PaxDb:P49242 PRIDE:P49242 Ensembl:ENSRNOT00000016329 GeneID:29288 KEGG:rno:29288 UCSC:RGD:62078 InParanoid:P49242 NextBio:608681 PRO:PR:P49242 Genevestigator:P49242 Uniprot:P49242)

HSP 1 Score: 53.9138 bits (128), Expect = 8.665e-9
Identity = 26/62 (41.94%), Postives = 35/62 (56.45%), Query Frame = 0 
Query:   11 FVKKWKFLIEANADVLKKPRFNLNKLMDLHGEDQWKNHNYDPSAGETIERPEGYEPPVEQEI 72
            FV+K K        +LKKP+F L KLM+LHGE            G  +ER +GYEPPV++ +
Sbjct:  211 FVRKVK--------MLKKPKFELGKLMELHGEGGSSGKTTGDETGAKVERADGYEPPVQESV 264
[Close]
BLAST of EMLSAG00000003535 vs. GO
Match: - (symbol:RPS3A "40S ribosomal protein S3a" species:9823 "Sus scrofa" [GO:0002181 "cytoplasmic translation" evidence=IBA] [GO:0003735 "structural constituent of ribosome" evidence=IBA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IBA] [GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA] [GO:0043066 "negative regulation of apoptotic process" evidence=IEA] HAMAP:MF_03122 InterPro:IPR001593 InterPro:IPR018281 InterPro:IPR027500 Pfam:PF01015 PROSITE:PS01191 GO:GO:0030154 GO:GO:0005730 GO:GO:0006412 GO:GO:0003735 GO:GO:0097194 GO:GO:0022627 OMA:GQNAYTK GeneTree:ENSGT00390000018433 OrthoDB:EOG7Q5HDW TreeFam:TF300037 EMBL:FP016091 ProteinModelPortal:F2Z5C7 SMR:F2Z5C7 PRIDE:F2Z5C7 Ensembl:ENSSSCT00000009878 ArrayExpress:F2Z5C7 Uniprot:F2Z5C7)

HSP 1 Score: 53.9138 bits (128), Expect = 8.754e-9
Identity = 26/62 (41.94%), Postives = 35/62 (56.45%), Query Frame = 0 
Query:   11 FVKKWKFLIEANADVLKKPRFNLNKLMDLHGEDQWKNHNYDPSAGETIERPEGYEPPVEQEI 72
            FV+K K        +LKKP+F L KLM+LHGE            G  +ER +GYEPPV++ +
Sbjct:  211 FVRKVK--------MLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
[Close]
BLAST of EMLSAG00000003535 vs. GO
Match: - (symbol:RPS3A "40S ribosomal protein S3a" species:9606 "Homo sapiens" [GO:0000184 "nuclear-transcribed mRNA catabolic process, nonsense-mediated decay" evidence=TAS] [GO:0002181 "cytoplasmic translation" evidence=IBA] [GO:0003723 "RNA binding" evidence=NAS] [GO:0003735 "structural constituent of ribosome" evidence=IBA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=ISS;TAS] [GO:0006412 "translation" evidence=IC;IMP;NAS;TAS] [GO:0006413 "translational initiation" evidence=TAS] [GO:0006414 "translational elongation" evidence=TAS] [GO:0006415 "translational termination" evidence=TAS] [GO:0006614 "SRP-dependent cotranslational protein targeting to membrane" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral process" evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0019058 "viral life cycle" evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS] [GO:0022627 "cytosolic small ribosomal subunit" evidence=IDA] [GO:0030154 "cell differentiation" evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IDA] [GO:0043066 "negative regulation of apoptotic process" evidence=IMP] [GO:0044267 "cellular protein metabolic process" evidence=TAS] [GO:0044822 "poly(A) RNA binding" evidence=IDA] [GO:0070062 "extracellular vesicular exosome" evidence=IDA] Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015 HAMAP:MF_03122 InterPro:IPR001593 InterPro:IPR018281 InterPro:IPR027500 Pfam:PF01015 PROSITE:PS01191 GO:GO:0070062 Reactome:REACT_116125 GO:GO:0043066 GO:GO:0030154 GO:GO:0005730 GO:GO:0000184 GO:GO:0006413 GO:GO:0003723 GO:GO:0003735 EMBL:CH471056 GO:GO:0002181 GO:GO:0006415 GO:GO:0006414 PDB:3J3A PDBsum:3J3A GO:GO:0022627 Reactome:REACT_1762 GO:GO:0006614 GO:GO:0019083 eggNOG:COG1890 HOGENOM:HOG000105220 KO:K02984 OMA:GQNAYTK CTD:6189 HOVERGEN:HBG000783 OrthoDB:EOG7Q5HDW TreeFam:TF300037 NextBio:24033 EMBL:M77234 EMBL:M84711 EMBL:L13802 EMBL:X87373 EMBL:AC095055 EMBL:AK311788 EMBL:BC000204 EMBL:BC001708 EMBL:BC004981 EMBL:BC006298 EMBL:BC009219 EMBL:BC009404 EMBL:BC017123 EMBL:BC019072 EMBL:BC030161 EMBL:BC070211 EMBL:BC071916 EMBL:AB007148 PIR:JC4662 RefSeq:NP_000997.1 UniGene:Hs.356572 ProteinModelPortal:P61247 SMR:P61247 BioGrid:112103 DIP:DIP-29408N IntAct:P61247 MINT:MINT-1160853 STRING:9606.ENSP00000346050 PhosphoSite:P61247 DMDM:47117764 SWISS-2DPAGE:P61247 PaxDb:P61247 PRIDE:P61247 DNASU:6189 Ensembl:ENST00000274065 GeneID:6189 KEGG:hsa:6189 UCSC:uc003ilz.4 GeneCards:GC04P152020 HGNC:HGNC:10421 HPA:HPA047100 HPA:HPA053454 MIM:180478 neXtProt:NX_P61247 PharmGKB:PA34830 InParanoid:P61247 PhylomeDB:P61247 GeneWiki:RPS3A GenomeRNAi:6189 PMAP-CutDB:P61247 PRO:PR:P61247 ArrayExpress:P61247 Bgee:P61247 CleanEx:HS_RPS3A Genevestigator:P61247 Uniprot:P61247)

HSP 1 Score: 53.9138 bits (128), Expect = 8.754e-9
Identity = 26/62 (41.94%), Postives = 35/62 (56.45%), Query Frame = 0 
Query:   11 FVKKWKFLIEANADVLKKPRFNLNKLMDLHGEDQWKNHNYDPSAGETIERPEGYEPPVEQEI 72
            FV+K K        +LKKP+F L KLM+LHGE            G  +ER +GYEPPV++ +
Sbjct:  211 FVRKVK--------MLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
[Close]
BLAST of EMLSAG00000003535 vs. GO
Match: - (symbol:RPS3A "40S ribosomal protein S3a" species:9615 "Canis lupus familiaris" [GO:0002181 "cytoplasmic translation" evidence=IBA] [GO:0003735 "structural constituent of ribosome" evidence=IBA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IBA] [GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA] [GO:0043066 "negative regulation of apoptotic process" evidence=IEA] HAMAP:MF_03122 InterPro:IPR001593 InterPro:IPR018281 InterPro:IPR027500 Pfam:PF01015 PROSITE:PS01191 GO:GO:0005829 GO:GO:0030154 GO:GO:0005730 GO:GO:0003735 GO:GO:0002181 GO:GO:0097194 GO:GO:0022627 KO:K02984 OMA:GQNAYTK GeneTree:ENSGT00390000018433 OrthoDB:EOG7Q5HDW TreeFam:TF300037 EMBL:AAEX03010036 RefSeq:XP_005629388.1 UniGene:Cfa.3544 ProteinModelPortal:F2Z4Q5 SMR:F2Z4Q5 PRIDE:F2Z4Q5 Ensembl:ENSCAFT00000012780 GeneID:403677 NextBio:20817182 Uniprot:F2Z4Q5)

HSP 1 Score: 53.9138 bits (128), Expect = 8.754e-9
Identity = 26/62 (41.94%), Postives = 35/62 (56.45%), Query Frame = 0 
Query:   11 FVKKWKFLIEANADVLKKPRFNLNKLMDLHGEDQWKNHNYDPSAGETIERPEGYEPPVEQEI 72
            FV+K K        +LKKP+F L KLM+LHGE            G  +ER +GYEPPV++ +
Sbjct:  211 FVRKVK--------MLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
[Close]
BLAST of EMLSAG00000003535 vs. GO
Match: - (symbol:RPS3A "40S ribosomal protein S3a" species:9913 "Bos taurus" [GO:0002181 "cytoplasmic translation" evidence=IBA] [GO:0003735 "structural constituent of ribosome" evidence=IBA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IBA] [GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=ISS] HAMAP:MF_03122 InterPro:IPR001593 InterPro:IPR018281 InterPro:IPR027500 Pfam:PF01015 PROSITE:PS01191 GO:GO:0005829 GO:GO:0030154 GO:GO:0005730 GO:GO:0003735 GO:GO:0030529 GO:GO:0002181 GO:GO:0097194 GO:GO:0022627 eggNOG:COG1890 HOGENOM:HOG000105220 KO:K02984 OMA:GQNAYTK GeneTree:ENSGT00390000018433 EMBL:AY911372 EMBL:BC151408 EMBL:BC102789 RefSeq:NP_001029210.1 UniGene:Bt.14068 ProteinModelPortal:Q56JV9 SMR:Q56JV9 PaxDb:Q56JV9 PRIDE:Q56JV9 Ensembl:ENSBTAT00000013079 GeneID:282053 KEGG:bta:282053 CTD:6189 HOVERGEN:HBG000783 InParanoid:Q56JV9 OrthoDB:EOG7Q5HDW TreeFam:TF300037 NextBio:20805912 Uniprot:Q56JV9)

HSP 1 Score: 53.9138 bits (128), Expect = 8.754e-9
Identity = 26/62 (41.94%), Postives = 35/62 (56.45%), Query Frame = 0 
Query:   11 FVKKWKFLIEANADVLKKPRFNLNKLMDLHGEDQWKNHNYDPSAGETIERPEGYEPPVEQEI 72
            FV+K K        +LKKP+F L KLM+LHGE            G  +ER +GYEPPV++ +
Sbjct:  211 FVRKVK--------MLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
[Close]
BLAST of EMLSAG00000003535 vs. C. finmarchicus
Match: gi|592788617|gb|GAXK01165951.1| (TSA: Calanus finmarchicus comp17_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 63.1586 bits (152), Expect = 1.760e-12
Identity = 27/45 (60.00%), Postives = 35/45 (77.78%), Query Frame = 0 
Query:   25 VLKKPRFNLNKLMDLHGEDQWKN-HNYDPSAGETIERPEGYEPPV 68
            V+++PRF+L KLMD+HGE   K   + DP+ GE +ERPEGYEPPV
Sbjct:  127 VMRRPRFDLTKLMDMHGEGSGKTTASTDPTTGEVVERPEGYEPPV 261

HSP 2 Score: 41.9726 bits (97), Expect = 5.755e-5
Identity = 19/25 (76.00%), Postives = 20/25 (80.00%), Query Frame = 0 
Query:    1 MNLTTDKLRSFVKKWKFLIEANADV 25
            M LTTDKLRS VKKW+ LIE N DV
Sbjct:  529 MGLTTDKLRSMVKKWQTLIEGNVDV 603
[Close]
BLAST of EMLSAG00000003535 vs. C. finmarchicus
Match: gi|592773881|gb|GAXK01180687.1| (TSA: Calanus finmarchicus comp3683991_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 38.5058 bits (88), Expect = 3.980e-4
Identity = 16/24 (66.67%), Postives = 21/24 (87.50%), Query Frame = 0 
Query:    2 NLTTDKLRSFVKKWKFLIEANADV 25
            ++TTDKLRS V+KW+ LIEA+ DV
Sbjct:    3 DMTTDKLRSLVRKWQSLIEAHVDV 74
[Close]
BLAST of EMLSAG00000003535 vs. C. finmarchicus
Match: gi|592803197|gb|GAXK01151371.1| (TSA: Calanus finmarchicus comp3879578_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 36.1946 bits (82), Expect = 4.137e-3
Identity = 16/33 (48.48%), Postives = 21/33 (63.64%), Query Frame = 0 
Query:    1 MNLTTDKLRSFVKKWKFLIEANADVLKKPRFNL 33
            M++TTDK+RS VKKW+  IE   DV     + L
Sbjct:  261 MDMTTDKIRSLVKKWQTTIECAVDVTTTDGYKL 359
[Close]
BLAST of EMLSAG00000003535 vs. C. finmarchicus
Match: gi|592834191|gb|GAXK01123353.1| (TSA: Calanus finmarchicus comp6562015_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 33.4982 bits (75), Expect = 1.256e-2
Identity = 19/57 (33.33%), Postives = 29/57 (50.88%), Query Frame = 0 
Query:    1 MNLTTDKLRSFVKKWKFLIEANADVLKKPRFNLNKLM---DLHGEDQWKNHNYDPSA 54
            M+LT DK  S ++KW+ +IEA+ DV     + +   +        DQ K + Y  SA
Sbjct:  127 MSLTRDKQCSLIRKWQTMIEAHVDVKTTDGYMVRMFVIAFTAKRADQVKTNCYAQSA 297
[Close]
BLAST of EMLSAG00000003535 vs. C. finmarchicus
Match: gi|592918886|gb|GAXK01039489.1| (TSA: Calanus finmarchicus comp6341404_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 33.4982 bits (75), Expect = 3.099e-2
Identity = 15/33 (45.45%), Postives = 21/33 (63.64%), Query Frame = 0 
Query:    1 MNLTTDKLRSFVKKWKFLIEANADVLKKPRFNL 33
            M++T DKL S ++KW+ LIEA  DV     + L
Sbjct:  357 MDITRDKLCSLIRKWQSLIEAFVDVRTTDGYTL 455

HSP 2 Score: 30.8018 bits (68), Expect = 2.324e-1
Identity = 11/18 (61.11%), Postives = 17/18 (94.44%), Query Frame = 0 
Query:   25 VLKKPRFNLNKLMDLHGE 42
            +L+KP+F+L KLM+LHG+
Sbjct:   51 ILRKPKFDLLKLMELHGD 104
[Close]
BLAST of EMLSAG00000003535 vs. C. finmarchicus
Match: gi|592760651|gb|GAXK01193762.1| (TSA: Calanus finmarchicus comp5351197_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 30.8018 bits (68), Expect = 2.557e-1
Identity = 14/25 (56.00%), Postives = 18/25 (72.00%), Query Frame = 0 
Query:    1 MNLTTDKLRSFVKKWKFLIEANADV 25
            + LTTDK RS ++KW  LIEA  +V
Sbjct:  405 LALTTDKARSLLRKWCTLIEAPIEV 479

HSP 2 Score: 26.1794 bits (56), Expect = 9.875e+0
Identity = 9/22 (40.91%), Postives = 14/22 (63.64%), Query Frame = 0 
Query:   21 ANADVLKKPRFNLNKLMDLHGE 42
            +   V++ P+F L +L D HGE
Sbjct:   84 SKVKVIRTPKFELQRLYDAHGE 149
[Close]
BLAST of EMLSAG00000003535 vs. C. finmarchicus
Match: gi|592804530|gb|GAXK01150038.1| (TSA: Calanus finmarchicus comp3335694_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 29.261 bits (64), Expect = 7.570e-1
Identity = 13/20 (65.00%), Postives = 16/20 (80.00%), Query Frame = 0 
Query:    1 MNLTTDKLRSFVKKWKFLIE 20
            M+LT DKL S +KKW+ LIE
Sbjct:    2 MDLTRDKLCSLLKKWQTLIE 61
[Close]
BLAST of EMLSAG00000003535 vs. C. finmarchicus
Match: gi|592889748|gb|GAXK01068627.1| (TSA: Calanus finmarchicus comp7727509_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 28.4906 bits (62), Expect = 1.432e+0
Identity = 9/18 (50.00%), Postives = 16/18 (88.89%), Query Frame = 0 
Query:   25 VLKKPRFNLNKLMDLHGE 42
            ++K P+F+L +LMD+HG+
Sbjct:  176 IVKAPKFDLPRLMDVHGD 229
[Close]
BLAST of EMLSAG00000003535 vs. C. finmarchicus
Match: gi|592919856|gb|GAXK01038519.1| (TSA: Calanus finmarchicus comp2810385_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 27.7202 bits (60), Expect = 2.995e+0
Identity = 10/17 (58.82%), Postives = 15/17 (88.24%), Query Frame = 0 
Query:   25 VLKKPRFNLNKLMDLHG 41
            +LKKP+F+L KL++LH 
Sbjct:  306 MLKKPKFDLTKLLELHS 356
[Close]
BLAST of EMLSAG00000003535 vs. C. finmarchicus
Match: gi|592821729|gb|GAXK01132839.1| (TSA: Calanus finmarchicus comp27380_c2_seq7 transcribed RNA sequence)

HSP 1 Score: 27.7202 bits (60), Expect = 3.388e+0
Identity = 10/15 (66.67%), Postives = 13/15 (86.67%), Query Frame = 0 
Query:   39 LHGEDQWKNHNYDPS 53
            +H EDQ +NH+YDPS
Sbjct:  659 IHQEDQDENHSYDPS 703
[Close]
BLAST of EMLSAG00000003535 vs. L. salmonis peptides
Match: EMLSAP00000003535 (pep:novel supercontig:LSalAtl2s:LSalAtl2s193:467899:468357:-1 gene:EMLSAG00000003535 transcript:EMLSAT00000003535 description:"snap_masked-LSalAtl2s193-processed-gene-4.2")

HSP 1 Score: 151.369 bits (381), Expect = 3.901e-49
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0 
Query:    1 MNLTTDKLRSFVKKWKFLIEANADVLKKPRFNLNKLMDLHGEDQWKNHNYDPSAGETIERPEGYEPPVEQEI 72
            MNLTTDKLRSFVKKWKFLIEANADVLKKPRFNLNKLMDLHGEDQWKNHNYDPSAGETIERPEGYEPPVEQEI
Sbjct:    1 MNLTTDKLRSFVKKWKFLIEANADVLKKPRFNLNKLMDLHGEDQWKNHNYDPSAGETIERPEGYEPPVEQEI 72
[Close]
BLAST of EMLSAG00000003535 vs. L. salmonis peptides
Match: EMLSAP00000010230 (pep:novel supercontig:LSalAtl2s:LSalAtl2s679:420934:422457:-1 gene:EMLSAG00000010230 transcript:EMLSAT00000010230 description:"maker-LSalAtl2s679-augustus-gene-3.19")

HSP 1 Score: 80.8777 bits (198), Expect = 3.183e-20
Identity = 36/48 (75.00%), Postives = 40/48 (83.33%), Query Frame = 0 
Query:   25 VLKKPRFNLNKLMDLHGEDQWKNHNYDPSAGETIERPEGYEPPVEQEI 72
            VLKKPRF+LNKLMDLHGE   K    DP+ GETIERPEGYEPPV+QE+
Sbjct:  218 VLKKPRFDLNKLMDLHGEGSGKTTTTDPNTGETIERPEGYEPPVQQEV 265

HSP 2 Score: 44.669 bits (104), Expect = 4.612e-7
Identity = 21/25 (84.00%), Postives = 23/25 (92.00%), Query Frame = 0 
Query:    1 MNLTTDKLRSFVKKWKFLIEANADV 25
            MNLTTDKLRS VKKW+ LIEA+ADV
Sbjct:  105 MNLTTDKLRSVVKKWQTLIEAHADV 129
[Close]
BLAST of EMLSAG00000003535 vs. SwissProt
Match: gi|121959415|sp|Q1HRR3.1|RS3A_AEDAE (RecName: Full=40S ribosomal protein S3a)

HSP 1 Score: 55.4546 bits (132), Expect = 9.942e-10
Identity = 26/51 (50.98%), Postives = 34/51 (66.67%), Query Frame = 0 
Query:   25 VLKKPRFNLNKLMDLHGEDQWKNHNYDPSAGE---TIERPEGYEPPVEQEI 72
            VLKKPRF+L  L++LHG+   K       A E   TI+RPEGYEPPV++ +
Sbjct:  220 VLKKPRFDLANLLELHGDGGGKGAEVSTGAAEGGVTIDRPEGYEPPVQESV 270
[Close]
BLAST of EMLSAG00000003535 vs. SwissProt
Match: gi|269969575|sp|B4L7F0.1|RS3A_DROMO (RecName: Full=40S ribosomal protein S3a)

HSP 1 Score: 54.6842 bits (130), Expect = 1.415e-9
Identity = 26/49 (53.06%), Postives = 36/49 (73.47%), Query Frame = 0 
Query:   25 VLKKPRFNLNKLMDLHGEDQWKNHNYDPSA-GETIERPEGYEPPVEQEI 72
            VLKKPRF+++KL++LHG+   K      SA G  I+RPEGYEPPV++ +
Sbjct:  220 VLKKPRFDISKLLELHGDGGGKTTEAVVSAEGAVIDRPEGYEPPVQEAV 268
[Close]
BLAST of EMLSAG00000003535 vs. SwissProt
Match: gi|269969578|sp|B4MEW8.1|RS3A_DROVI (RecName: Full=40S ribosomal protein S3a)

HSP 1 Score: 54.6842 bits (130), Expect = 1.875e-9
Identity = 26/49 (53.06%), Postives = 36/49 (73.47%), Query Frame = 0 
Query:   25 VLKKPRFNLNKLMDLHGEDQWKNHNYDPSA-GETIERPEGYEPPVEQEI 72
            VLKKPRF+++KL++LHG+   K      SA G  I+RPEGYEPPV++ +
Sbjct:  220 VLKKPRFDVSKLLELHGDGGGKTTEAVVSAEGAVIDRPEGYEPPVQEAV 268
[Close]
BLAST of EMLSAG00000003535 vs. SwissProt
Match: gi|269969579|sp|B4NHI4.1|RS3A_DROWI (RecName: Full=40S ribosomal protein S3a)

HSP 1 Score: 54.299 bits (129), Expect = 2.012e-9
Identity = 25/49 (51.02%), Postives = 36/49 (73.47%), Query Frame = 0 
Query:   25 VLKKPRFNLNKLMDLHGEDQWKNHNYDPSA-GETIERPEGYEPPVEQEI 72
            VLKKPRF+++KL++LHG+   K      SA G  ++RPEGYEPPV++ +
Sbjct:  220 VLKKPRFDISKLLELHGDGGGKTSEAVVSAEGAVVDRPEGYEPPVQEAV 268
[Close]
BLAST of EMLSAG00000003535 vs. SwissProt
Match: gi|74910270|sp|Q6EV04.1|RS3A_BIPLU (RecName: Full=40S ribosomal protein S3a)

HSP 1 Score: 54.299 bits (129), Expect = 2.377e-9
Identity = 26/49 (53.06%), Postives = 37/49 (75.51%), Query Frame = 0 
Query:   25 VLKKPRFNLNKLMDLHGEDQWKNHNYDP-SAGETIERPEGYEPPVEQEI 72
            VLKKPRF L+KL++LHG D  K  + +P  AG  +++PEGYEPPV++ +
Sbjct:  220 VLKKPRFELSKLLELHG-DSGKGGSGEPGEAGSKVDKPEGYEPPVQEAV 267
[Close]
BLAST of EMLSAG00000003535 vs. SwissProt
Match: gi|74938351|sp|Q95V35.1|RS3A_SPOFR (RecName: Full=40S ribosomal protein S3a)

HSP 1 Score: 54.299 bits (129), Expect = 2.418e-9
Identity = 25/48 (52.08%), Postives = 33/48 (68.75%), Query Frame = 0 
Query:   25 VLKKPRFNLNKLMDLHGEDQWKNHNYDPSAGETIERPEGYEPPVEQEI 72
            VLK+PRF ++KLM+LHGE           AG+  ERPEGYEPPV++ +
Sbjct:  220 VLKRPRFEISKLMELHGEGGSGKRG---EAGDKSERPEGYEPPVQESV 264
[Close]
BLAST of EMLSAG00000003535 vs. SwissProt
Match: gi|269969564|sp|A5JSW9.1|RS3A_BOMMA (RecName: Full=40S ribosomal protein S3a)

HSP 1 Score: 53.9138 bits (128), Expect = 2.635e-9
Identity = 25/48 (52.08%), Postives = 33/48 (68.75%), Query Frame = 0 
Query:   25 VLKKPRFNLNKLMDLHGEDQWKNHNYDPSAGETIERPEGYEPPVEQEI 72
            VLK+PRF ++KLM+LHGE           AG+  ERPEGYEPPV++ +
Sbjct:  220 VLKRPRFEISKLMELHGEGGGGKR----EAGDKSERPEGYEPPVQESV 263
[Close]
BLAST of EMLSAG00000003535 vs. SwissProt
Match: gi|121992361|sp|Q29CU2.1|RS3A_DROPS (RecName: Full=40S ribosomal protein S3a >gi|269969576|sp|B4H9N7.1|RS3A_DROPE RecName: Full=40S ribosomal protein S3a)

HSP 1 Score: 53.9138 bits (128), Expect = 2.831e-9
Identity = 25/49 (51.02%), Postives = 36/49 (73.47%), Query Frame = 0 
Query:   25 VLKKPRFNLNKLMDLHGEDQWKNHNYDPSA-GETIERPEGYEPPVEQEI 72
            VLKKPRF+++KL++LHG+   K      SA G  ++RPEGYEPPV++ +
Sbjct:  220 VLKKPRFDVSKLLELHGDGGGKTTEAVVSAEGAVVDRPEGYEPPVQEAV 268
[Close]
BLAST of EMLSAG00000003535 vs. SwissProt
Match: gi|269969572|sp|B3N1G9.1|RS3A_DROAN (RecName: Full=40S ribosomal protein S3a)

HSP 1 Score: 53.9138 bits (128), Expect = 2.831e-9
Identity = 25/49 (51.02%), Postives = 37/49 (75.51%), Query Frame = 0 
Query:   25 VLKKPRFNLNKLMDLHGEDQWKNHNYDPSA-GETIERPEGYEPPVEQEI 72
            VLKKPRF+++KL++LHG+   K+ +   S  G  I+RPEGYEPPV++ +
Sbjct:  220 VLKKPRFDVSKLLELHGDGGGKSSDAVVSTEGAVIDRPEGYEPPVQEAV 268
[Close]
BLAST of EMLSAG00000003535 vs. SwissProt
Match: gi|269969573|sp|B3P9W1.1|RS3A_DROER (RecName: Full=40S ribosomal protein S3a >gi|290457688|sp|P55830.4|RS3A_DROME RecName: Full=40S ribosomal protein S3a; AltName: Full=C3 protein)

HSP 1 Score: 53.9138 bits (128), Expect = 3.098e-9
Identity = 25/49 (51.02%), Postives = 36/49 (73.47%), Query Frame = 0 
Query:   25 VLKKPRFNLNKLMDLHGEDQWKN-HNYDPSAGETIERPEGYEPPVEQEI 72
            VLKKPRF+++KL++LHG+   K+      S G  I+RPEGYEPPV++ +
Sbjct:  220 VLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAVIDRPEGYEPPVQEAV 268
[Close]
BLAST of EMLSAG00000003535 vs. Select Arthropod Genomes
Match: XP_006565264.1 (PREDICTED: 40S ribosomal protein S3a [Apis mellifera])

HSP 1 Score: 56.225 bits (134), Expect = 2.325e-10
Identity = 23/48 (47.92%), Postives = 33/48 (68.75%), Query Frame = 0 
Query:   25 VLKKPRFNLNKLMDLHGEDQWKNHNYDPSAGETIERPEGYEPPVEQEI 72
            VLKKPRF L+KL++LHG+           +G  ++RPEGYEPPV++ +
Sbjct:  220 VLKKPRFELSKLLELHGDGAGSKSEEVGESGSKVDRPEGYEPPVQESV 267
[Close]
BLAST of EMLSAG00000003535 vs. Select Arthropod Genomes
Match: AAN06541.1 (ribosomal protein S3A, isoform B [Drosophila melanogaster])

HSP 1 Score: 54.299 bits (129), Expect = 7.707e-10
Identity = 25/49 (51.02%), Postives = 36/49 (73.47%), Query Frame = 0 
Query:   25 VLKKPRFNLNKLMDLHGEDQWKN-HNYDPSAGETIERPEGYEPPVEQEI 72
            VLKKPRF+++KL++LHG+   K+      S G  I+RPEGYEPPV++ +
Sbjct:  170 VLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAVIDRPEGYEPPVQEAV 218
[Close]
BLAST of EMLSAG00000003535 vs. Select Arthropod Genomes
Match: AFH06764.1 (ribosomal protein S3A, isoform F [Drosophila melanogaster])

HSP 1 Score: 53.9138 bits (128), Expect = 1.502e-9
Identity = 25/49 (51.02%), Postives = 36/49 (73.47%), Query Frame = 0 
Query:   25 VLKKPRFNLNKLMDLHGEDQWKN-HNYDPSAGETIERPEGYEPPVEQEI 72
            VLKKPRF+++KL++LHG+   K+      S G  I+RPEGYEPPV++ +
Sbjct:  220 VLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAVIDRPEGYEPPVQEAV 268
[Close]
BLAST of EMLSAG00000003535 vs. Select Arthropod Genomes
Match: AAF59372.1 (ribosomal protein S3A, isoform A [Drosophila melanogaster])

HSP 1 Score: 53.9138 bits (128), Expect = 1.502e-9
Identity = 25/49 (51.02%), Postives = 36/49 (73.47%), Query Frame = 0 
Query:   25 VLKKPRFNLNKLMDLHGEDQWKN-HNYDPSAGETIERPEGYEPPVEQEI 72
            VLKKPRF+++KL++LHG+   K+      S G  I+RPEGYEPPV++ +
Sbjct:  220 VLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAVIDRPEGYEPPVQEAV 268
[Close]
BLAST of EMLSAG00000003535 vs. Select Arthropod Genomes
Match: EAA08803.3 (AGAP003532-PA [Anopheles gambiae str. PEST])

HSP 1 Score: 53.1434 bits (126), Expect = 3.041e-9
Identity = 25/50 (50.00%), Postives = 33/50 (66.00%), Query Frame = 0 
Query:   25 VLKKPRFNLNKLMDLHGEDQWKNHNYDPSA--GETIERPEGYEPPVEQEI 72
            VLKKPRF+L+ LM+LHG+   K       A  G  ++RPEGYEPPV+  +
Sbjct:  220 VLKKPRFDLSSLMELHGDGGGKAAEVSTGAASGVVVDRPEGYEPPVQASV 269
[Close]
BLAST of EMLSAG00000003535 vs. Select Arthropod Genomes
Match: gb|KPM08157.1| (40S ribosomal protein S3a-like protein [Sarcoptes scabiei])

HSP 1 Score: 52.7582 bits (125), Expect = 3.878e-9
Identity = 23/51 (45.10%), Postives = 37/51 (72.55%), Query Frame = 0 
Query:   25 VLKKPRFNLNKLMDLHGEDQWKNHNYDPSAGET---IERPEGYEPPVEQEI 72
            VLKKP+F+L+KL+++HGE +  +     + GE+   ++RPEGYEPPV+  +
Sbjct:  217 VLKKPKFDLSKLLEMHGEGKGSSSADPKTDGESSTKVDRPEGYEPPVQAAV 267
[Close]
BLAST of EMLSAG00000003535 vs. Select Arthropod Genomes
Match: gb|EFA05373.1| (40S ribosomal protein S3a-like Protein [Tribolium castaneum])

HSP 1 Score: 52.7582 bits (125), Expect = 4.118e-9
Identity = 24/48 (50.00%), Postives = 33/48 (68.75%), Query Frame = 0 
Query:   25 VLKKPRFNLNKLMDLHGEDQWKNHNYDPSAGETIERPEGYEPPVEQEI 72
            VLKKPRF L+KL++LHG+           AG  ++RPEGYEPPV++ +
Sbjct:  220 VLKKPRFELSKLLELHGDGGKGGSGEPGEAGAKVDRPEGYEPPVQESV 267
[Close]
BLAST of EMLSAG00000003535 vs. Select Arthropod Genomes
Match: EEB15398.1 (40S ribosomal protein S3A, putative [Pediculus humanus corporis])

HSP 1 Score: 52.373 bits (124), Expect = 5.371e-9
Identity = 24/48 (50.00%), Postives = 37/48 (77.08%), Query Frame = 0 
Query:   25 VLKKPRFNLNKLMDLHGEDQWKNHNYDPSAGETIERPEGYEPPVEQEI 72
            VLKKPRF+L+KL++LHG+   K  + +P  G  ++RP+GYEPPV++ +
Sbjct:  220 VLKKPRFDLSKLLELHGDS--KAASDEP--GAKVDRPKGYEPPVQESV 263
[Close]
BLAST of EMLSAG00000003535 vs. Select Arthropod Genomes
Match: gb|EEC09628.1| (40S ribosomal protein S3A, putative [Ixodes scapularis])

HSP 1 Score: 51.6026 bits (122), Expect = 1.177e-8
Identity = 25/54 (46.30%), Postives = 33/54 (61.11%), Query Frame = 0 
Query:   25 VLKKPRFNLNKLMDLHGEDQWKNHNYDPSA------GETIERPEGYEPPVEQEI 72
            VLKKP+F L KL++LHGE   K      +A      G  ++RPEGYEPPV + +
Sbjct:  217 VLKKPKFELGKLLELHGEGTSKGGAASTAAVAKGEEGVKVDRPEGYEPPVLETV 270
[Close]
BLAST of EMLSAG00000003535 vs. nr
Match: gi|225713754|gb|ACO12723.1| (40S ribosomal protein S3a [Lepeophtheirus salmonis] >gi|290462159|gb|ADD24127.1| 40S ribosomal protein S3a [Lepeophtheirus salmonis] >gi|290562139|gb|ADD38466.1| 40S ribosomal protein S3a [Lepeophtheirus salmonis])

HSP 1 Score: 81.2629 bits (199), Expect = 5.846e-17
Identity = 36/48 (75.00%), Postives = 40/48 (83.33%), Query Frame = 0 
Query:   25 VLKKPRFNLNKLMDLHGEDQWKNHNYDPSAGETIERPEGYEPPVEQEI 72
            VLKKPRF+LNKLMDLHGE   K    DP+ GETIERPEGYEPPV+QE+
Sbjct:  218 VLKKPRFDLNKLMDLHGEGSGKTTTTDPNTGETIERPEGYEPPVQQEV 265
[Close]
BLAST of EMLSAG00000003535 vs. nr
Match: gi|961375380|gb|ALS04434.1| (40S ribosomal protein S3a [Acartia pacifica])

HSP 1 Score: 65.4698 bits (158), Expect = 3.975e-11
Identity = 26/44 (59.09%), Postives = 34/44 (77.27%), Query Frame = 0 
Query:   25 VLKKPRFNLNKLMDLHGEDQWKNHNYDPSAGETIERPEGYEPPV 68
            V+K+PRF+L KLM++HGE   K    DP+ GE ++RPEGYEPPV
Sbjct:  220 VMKRPRFDLTKLMEMHGEGSGKGVTTDPTTGEAVDRPEGYEPPV 263
[Close]
BLAST of EMLSAG00000003535 vs. nr
Match: gi|961375378|gb|ALS04433.1| (40S ribosomal protein S3a [Acartia pacifica])

HSP 1 Score: 65.4698 bits (158), Expect = 3.975e-11
Identity = 26/44 (59.09%), Postives = 34/44 (77.27%), Query Frame = 0 
Query:   25 VLKKPRFNLNKLMDLHGEDQWKNHNYDPSAGETIERPEGYEPPV 68
            V+K+PRF+L KLM++HGE   K    DP+ GE ++RPEGYEPPV
Sbjct:  220 VMKRPRFDLTKLMEMHGEGSGKGVTTDPTTGEAVDRPEGYEPPV 263
[Close]
BLAST of EMLSAG00000003535 vs. nr
Match: gi|961376600|gb|ALS05044.1| (40S ribosomal protein S3a [Centropages dorsispinatus])

HSP 1 Score: 62.7734 bits (151), Expect = 4.354e-10
Identity = 27/49 (55.10%), Postives = 36/49 (73.47%), Query Frame = 0 
Query:   25 VLKKPRFNLNKLMDLHGEDQWKNH-NYDPSAGETIERPEGYEPPVEQEI 72
            V+K+PRF+L KLMD+HGE   K     DP+ GE ++RPEGYEPPV + +
Sbjct:  220 VMKRPRFDLAKLMDMHGEGSGKTVVTTDPATGEAVDRPEGYEPPVMEAV 268
[Close]
BLAST of EMLSAG00000003535 vs. nr
Match: gi|405958431|gb|EKC24560.1| (40S ribosomal protein S3a [Crassostrea gigas])

HSP 1 Score: 61.6178 bits (148), Expect = 4.455e-10
Identity = 27/48 (56.25%), Postives = 36/48 (75.00%), Query Frame = 0 
Query:   25 VLKKPRFNLNKLMDLHGEDQWKNHNYDPSAGETIERPEGYEPPVEQEI 72
            VLKKP+F++ KLM++HGE   K    D  +GET+ RPEGYEPPV+Q +
Sbjct:  131 VLKKPKFDIGKLMEMHGEGGSKTVITD--SGETVARPEGYEPPVQQSV 176
[Close]
BLAST of EMLSAG00000003535 vs. nr
Match: gi|914557197|gb|KOB66056.1| (40S ribosomal protein S3a [Operophtera brumata])

HSP 1 Score: 61.6178 bits (148), Expect = 5.995e-10
Identity = 41/108 (37.96%), Postives = 51/108 (47.22%), Query Frame = 0 
Query:    1 MNLTTDKLRSFVKKWKFLIEANADV------------------------------------LKKPRFNLNKLMDLHGEDQWKNHNYDPSAGETIERPEGYEPPVEQEI 72
            M+LTTDKLR  VKKW+ L+EAN DV                                    LK+PRF ++KLM+LHGE            G   ERPEGYEPPV++ +
Sbjct:  106 MDLTTDKLRWMVKKWQTLVEANIDVKTTDGYLLRVFCIGFTSKDSLSQRKTCYAQHTQVKVLKRPRFEISKLMELHGEGGGGKRGEVGEKG---ERPEGYEPPVQESV 210
[Close]
BLAST of EMLSAG00000003535 vs. nr
Match: gi|110456351|gb|ABG74701.1| (ribosomal protein S3a-like protein, partial [Diaphorina citri])

HSP 1 Score: 57.7658 bits (138), Expect = 1.684e-9
Identity = 30/62 (48.39%), Postives = 41/62 (66.13%), Query Frame = 0 
Query:   11 FVKKWKFLIEANADVLKKPRFNLNKLMDLHGEDQWKNHNYDPSAGETIERPEGYEPPVEQEI 72
            F++K K        VLKKPRF L+KL++LHGE   K       +GET++RPEGYEPPV++ +
Sbjct:   34 FIRKVK--------VLKKPRFELSKLLELHGE--GKGGATIDESGETVDRPEGYEPPVQEAV 85
[Close]
BLAST of EMLSAG00000003535 vs. nr
Match: gi|70909553|emb|CAJ17198.1| (ribosomal protein S3Ae, partial [Eucinetus sp. APV-2005])

HSP 1 Score: 59.3066 bits (142), Expect = 2.097e-9
Identity = 25/48 (52.08%), Postives = 34/48 (70.83%), Query Frame = 0 
Query:   25 VLKKPRFNLNKLMDLHGEDQWKNHNYDPSAGETIERPEGYEPPVEQEI 72
            VLKKPRF L+KL++LHG+   K       AG  ++RPEGYEPPV++ +
Sbjct:  113 VLKKPRFELSKLLELHGDGGGKGAAEPGEAGSAVQRPEGYEPPVQETV 160
[Close]
BLAST of EMLSAG00000003535 vs. nr
Match: gi|762142849|ref|XP_011454655.1| (PREDICTED: 40S ribosomal protein S3a-like [Crassostrea gigas])

HSP 1 Score: 60.077 bits (144), Expect = 3.160e-9
Identity = 27/48 (56.25%), Postives = 36/48 (75.00%), Query Frame = 0 
Query:   25 VLKKPRFNLNKLMDLHGEDQWKNHNYDPSAGETIERPEGYEPPVEQEI 72
            VLKKP+F++ KLM++HGE   K    D  +GET+ RPEGYEPPV+Q +
Sbjct:  188 VLKKPKFDIGKLMEMHGEGGSKTVITD--SGETVARPEGYEPPVQQSV 233
[Close]
BLAST of EMLSAG00000003535 vs. nr
Match: gi|973425547|gb|ALX27208.1| (ribosomal protein S3a, partial [Mytilus trossulus])

HSP 1 Score: 59.3066 bits (142), Expect = 8.979e-9
Identity = 28/48 (58.33%), Postives = 35/48 (72.92%), Query Frame = 0 
Query:   25 VLKKPRFNLNKLMDLHGEDQWKNHNYDPSAGETIERPEGYEPPVEQEI 72
            VLKKP+F+L KLM+LHGE    +      +GET+ERPEGYEPPV Q +
Sbjct:  221 VLKKPKFDLGKLMELHGEGS-ASKTVITESGETVERPEGYEPPVLQSV 267
[Close]
BLAST of EMLSAG00000003535 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold631_size122145-snap-gene-0.46 (protein:Tk01061 transcript:maker-scaffold631_size122145-snap-gene-0.46-mRNA-1 annotation:"40s ribosomal protein s3a")

HSP 1 Score: 67.0106 bits (162), Expect = 2.121e-15
Identity = 30/49 (61.22%), Postives = 36/49 (73.47%), Query Frame = 0 
Query:   25 VLKKPRFNLNKLMDLHGEDQWK-NHNYDPSAGETIERPEGYEPPVEQEI 72
            VLKKPRF+L KLMDLHGE   K     DP+ GE + RPEGYEPPV++ +
Sbjct:  231 VLKKPRFDLAKLMDLHGEGSGKGTATTDPTTGEVVSRPEGYEPPVQEAV 279
The following BLAST results are available for this feature:
BLAST of EMLSAG00000003535 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 25
Match NameE-valueIdentityDescription
-2.456e-941.94symbol:RPS3A "Ribosomal protein S3A, isoform CRA_e... [more]
-4.207e-941.54symbol:RPS3A "40S ribosomal protein S3a" species:9... [more]
-4.296e-941.94symbol:RPS3A "40S ribosomal protein S3a" species:9... [more]
-8.144e-951.02symbol:RpS3A "Ribosomal protein S3A" species:7227 ... [more]
-8.665e-941.94symbol:Rps3a "40S ribosomal protein S3a" species:1... [more]
-8.665e-941.94symbol:Rps3a "ribosomal protein S3a" species:10116... [more]
-8.754e-941.94symbol:RPS3A "40S ribosomal protein S3a" species:9... [more]
-8.754e-941.94symbol:RPS3A "40S ribosomal protein S3a" species:9... [more]
-8.754e-941.94symbol:RPS3A "40S ribosomal protein S3a" species:9... [more]
-8.754e-941.94symbol:RPS3A "40S ribosomal protein S3a" species:9... [more]

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BLAST of EMLSAG00000003535 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 17
Match NameE-valueIdentityDescription
gi|592788617|gb|GAXK01165951.1|1.760e-1260.00TSA: Calanus finmarchicus comp17_c0_seq1 transcrib... [more]
gi|592773881|gb|GAXK01180687.1|3.980e-466.67TSA: Calanus finmarchicus comp3683991_c0_seq1 tran... [more]
gi|592803197|gb|GAXK01151371.1|4.137e-348.48TSA: Calanus finmarchicus comp3879578_c0_seq1 tran... [more]
gi|592834191|gb|GAXK01123353.1|1.256e-233.33TSA: Calanus finmarchicus comp6562015_c0_seq1 tran... [more]
gi|592918886|gb|GAXK01039489.1|3.099e-245.45TSA: Calanus finmarchicus comp6341404_c0_seq1 tran... [more]
gi|592760651|gb|GAXK01193762.1|2.557e-156.00TSA: Calanus finmarchicus comp5351197_c0_seq1 tran... [more]
gi|592804530|gb|GAXK01150038.1|7.570e-165.00TSA: Calanus finmarchicus comp3335694_c0_seq1 tran... [more]
gi|592889748|gb|GAXK01068627.1|1.432e+050.00TSA: Calanus finmarchicus comp7727509_c0_seq1 tran... [more]
gi|592919856|gb|GAXK01038519.1|2.995e+058.82TSA: Calanus finmarchicus comp2810385_c0_seq1 tran... [more]
gi|592821729|gb|GAXK01132839.1|3.388e+066.67TSA: Calanus finmarchicus comp27380_c2_seq7 transc... [more]

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BLAST of EMLSAG00000003535 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAP000000035353.901e-49100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s193:46789... [more]
EMLSAP000000102303.183e-2075.00pep:novel supercontig:LSalAtl2s:LSalAtl2s679:42093... [more]
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BLAST of EMLSAG00000003535 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|121959415|sp|Q1HRR3.1|RS3A_AEDAE9.942e-1050.98RecName: Full=40S ribosomal protein S3a[more]
gi|269969575|sp|B4L7F0.1|RS3A_DROMO1.415e-953.06RecName: Full=40S ribosomal protein S3a[more]
gi|269969578|sp|B4MEW8.1|RS3A_DROVI1.875e-953.06RecName: Full=40S ribosomal protein S3a[more]
gi|269969579|sp|B4NHI4.1|RS3A_DROWI2.012e-951.02RecName: Full=40S ribosomal protein S3a[more]
gi|74910270|sp|Q6EV04.1|RS3A_BIPLU2.377e-953.06RecName: Full=40S ribosomal protein S3a[more]
gi|74938351|sp|Q95V35.1|RS3A_SPOFR2.418e-952.08RecName: Full=40S ribosomal protein S3a[more]
gi|269969564|sp|A5JSW9.1|RS3A_BOMMA2.635e-952.08RecName: Full=40S ribosomal protein S3a[more]
gi|121992361|sp|Q29CU2.1|RS3A_DROPS2.831e-951.02RecName: Full=40S ribosomal protein S3a >gi|269969... [more]
gi|269969572|sp|B3N1G9.1|RS3A_DROAN2.831e-951.02RecName: Full=40S ribosomal protein S3a[more]
gi|269969573|sp|B3P9W1.1|RS3A_DROER3.098e-951.02RecName: Full=40S ribosomal protein S3a >gi|290457... [more]

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BLAST of EMLSAG00000003535 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 9
Match NameE-valueIdentityDescription
XP_006565264.12.325e-1047.92PREDICTED: 40S ribosomal protein S3a [Apis mellife... [more]
AAN06541.17.707e-1051.02ribosomal protein S3A, isoform B [Drosophila melan... [more]
AFH06764.11.502e-951.02ribosomal protein S3A, isoform F [Drosophila melan... [more]
AAF59372.11.502e-951.02ribosomal protein S3A, isoform A [Drosophila melan... [more]
EAA08803.33.041e-950.00AGAP003532-PA [Anopheles gambiae str. PEST][more]
gb|KPM08157.1|3.878e-945.1040S ribosomal protein S3a-like protein [Sarcoptes ... [more]
gb|EFA05373.1|4.118e-950.0040S ribosomal protein S3a-like Protein [Tribolium ... [more]
EEB15398.15.371e-950.0040S ribosomal protein S3A, putative [Pediculus hum... [more]
gb|EEC09628.1|1.177e-846.3040S ribosomal protein S3A, putative [Ixodes scapul... [more]
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BLAST of EMLSAG00000003535 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25
Match NameE-valueIdentityDescription
gi|225713754|gb|ACO12723.1|5.846e-1775.0040S ribosomal protein S3a [Lepeophtheirus salmonis... [more]
gi|961375380|gb|ALS04434.1|3.975e-1159.0940S ribosomal protein S3a [Acartia pacifica][more]
gi|961375378|gb|ALS04433.1|3.975e-1159.0940S ribosomal protein S3a [Acartia pacifica][more]
gi|961376600|gb|ALS05044.1|4.354e-1055.1040S ribosomal protein S3a [Centropages dorsispinat... [more]
gi|405958431|gb|EKC24560.1|4.455e-1056.2540S ribosomal protein S3a [Crassostrea gigas][more]
gi|914557197|gb|KOB66056.1|5.995e-1037.9640S ribosomal protein S3a [Operophtera brumata][more]
gi|110456351|gb|ABG74701.1|1.684e-948.39ribosomal protein S3a-like protein, partial [Diaph... [more]
gi|70909553|emb|CAJ17198.1|2.097e-952.08ribosomal protein S3Ae, partial [Eucinetus sp. APV... [more]
gi|762142849|ref|XP_011454655.1|3.160e-956.25PREDICTED: 40S ribosomal protein S3a-like [Crassos... [more]
gi|973425547|gb|ALX27208.1|8.979e-958.33ribosomal protein S3a, partial [Mytilus trossulus][more]

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BLAST of EMLSAG00000003535 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 1
Match NameE-valueIdentityDescription
maker-scaffold631_size122145-snap-gene-0.462.121e-1561.22protein:Tk01061 transcript:maker-scaffold631_size1... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s193supercontigLSalAtl2s193:467899..468357 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionsnap_masked-LSalAtl2s193-processed-gene-4.2
Biotypeprotein_coding
EvidenceIEA
Note40S ribosomal protein S3a
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000003535 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000003535EMLSAT00000003535-699382Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s193:467899..468357-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000003535-686301 ID=EMLSAG00000003535-686301|Name=EMLSAG00000003535|organism=Lepeophtheirus salmonis|type=gene|length=459bp|location=Sequence derived from alignment at LSalAtl2s193:467899..468357- (Lepeophtheirus salmonis)
ATGAATTTGACCACAGATAAGCTGAGATCCTTTGTCAAGAAGTGGAAATT
TCTGATTGAGGCCAATGCTGACGTAGAAACCAACGATGGTATTTGATCTA
TACTTACAGAATTGGTACTACTTATTACAATCAATTGTAACAGATCCGTC
AAATCAGAACCAAGATGGTCTACATCATGACCTGTGAAATTTCTTACTGC
CATTTGAAGGACGTCCTCTAAAAGCTGATCCCCGAATCACTGGCTGMCGA
CGTTCAAAAGGCCTGCAGTTGAATGTACCCTCTTCACAACGTGAATTTCA
GAAATATAAAAGGTTCTCAAAAAGCCTAGATTCAATTTGAACAAATTGAT
GGATCTTCATGGAGAAGATCAGTGGAAAAATCACAACTATGATCCTAGCG
CCGGGGAGACCATTGAGAGACCAGAGGGCTACGAACCCCCTGTCGAACAA
GAAATCTAA
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