EMLSAG00000003782, EMLSAG00000003782-686548 (gene) Lepeophtheirus salmonis

Overview


Name	EMLSAG00000003782
Unique Name	EMLSAG00000003782-686548
Type	gene
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of EMLSAG00000003782 vs. C. finmarchicus
Match: gi|592854596|gb|GAXK01102948.1| (TSA: Calanus finmarchicus comp61430_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 178.718 bits (452), Expect = 3.169e-50
Identity = 92/184 (50.00%), Postives = 116/184 (63.04%), Query Frame = 0

Query:   94 RNQVFLRPTNVPLLNAPKNSTQFIIDDHENSNLFWNFHD------------------------------SENEDIDPSNP---AGFAVFTGQYFN-HQEDQMSPDDDSYWAEYSERDFQTVYETAHQEKIAEWSKKKLVGEISYLEKRQRNLLNSLSLVDPKMYLHKLQSELLSLQEDNRKLRL 243
            + +V+LRP+N PLL APKNSTQFIIDDHENSNLFWNF                                +EN+  D   P    G AV  GQ+F     D+ SPDDD++WA YSERDF++VYETAHQE+I  W + K++ EIS LE +Q+ L+N LS +DP +YL KLQ ELL+LQE NR+L+L
Sbjct:  276 QKKVYLRPSNNPLLRAPKNSTQFIIDDHENSNLFWNFDAHPDEESTRDGTEGGDVVEEAVGEEGSEPPAAENQVRDGGQPRQNQGMAVMPGQFFGLSDSDRFSPDDDNFWAAYSERDFESVYETAHQEEIYSWERGKIIDEISVLEIKQKQLINMLSQIDPLIYLQKLQHELLALQEQNRQLKL 827

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BLAST of EMLSAG00000003782 vs. C. finmarchicus
Match: gi|592854597|gb|GAXK01102947.1| (TSA: Calanus finmarchicus comp61430_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 178.718 bits (452), Expect = 3.324e-50
Identity = 92/184 (50.00%), Postives = 116/184 (63.04%), Query Frame = 0

Query:   94 RNQVFLRPTNVPLLNAPKNSTQFIIDDHENSNLFWNFHD------------------------------SENEDIDPSNP---AGFAVFTGQYFN-HQEDQMSPDDDSYWAEYSERDFQTVYETAHQEKIAEWSKKKLVGEISYLEKRQRNLLNSLSLVDPKMYLHKLQSELLSLQEDNRKLRL 243
            + +V+LRP+N PLL APKNSTQFIIDDHENSNLFWNF                                +EN+  D   P    G AV  GQ+F     D+ SPDDD++WA YSERDF++VYETAHQE+I  W + K++ EIS LE +Q+ L+N LS +DP +YL KLQ ELL+LQE NR+L+L
Sbjct:  276 QKKVYLRPSNNPLLRAPKNSTQFIIDDHENSNLFWNFDAHPDEESTRDGTEGGDVVEEAVGEEGSEPPAAENQVRDGGQPRQNQGMAVMPGQFFGLSDSDRFSPDDDNFWAAYSERDFESVYETAHQEEIYSWERGKIIDEISVLEIKQKQLINMLSQIDPLIYLQKLQHELLALQEQNRQLKL 827

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BLAST of EMLSAG00000003782 vs. C. finmarchicus
Match: gi|592823088|gb|GAXK01131480.1| (TSA: Calanus finmarchicus comp161860_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 30.4166 bits (67), Expect = 9.584e+0
Identity = 25/99 (25.25%), Postives = 48/99 (48.48%), Query Frame = 0

Query:  109 APKNSTQFIIDDHENSNLFWNFHDSENEDIDPSNPAGFAVFTGQYFNHQEDQMSPDDDSYWAEYSERDFQTVYETAHQEKIAEWSKKKLVGEISYLEKR 207
            AP N+TQF++ DH +  L       E E  +  N  G     G+  + +    SP D+    +++ ++F   Y+  H  ++ + SK+ L+ E   +E++
Sbjct:  945 APYNTTQFLLADHHDDTLQQLEKKLEVEKGEKRN--GDVNMKGRNDDEEYYNSSPTDEE--EDFASKEFMKDYDIQHINRLEKMSKEILLNEFMIIERK 1229

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BLAST of EMLSAG00000003782 vs. L. salmonis peptides
Match: EMLSAP00000003782 (pep:novel supercontig:LSalAtl2s:LSalAtl2s204:554488:557483:1 gene:EMLSAG00000003782 transcript:EMLSAT00000003782 description:"snap_masked-LSalAtl2s204-processed-gene-5.6")

HSP 1 Score: 604.364 bits (1557), Expect = 0.000e+0
Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 0

Query:    1 MIELMLYENMPNSGTSNGSVGHSVIPDMKRKNRRAKKGRNKNVCKMESVLKGIKKVNENKEEVRLLQDTLRSEILSSECKKSMVKRRSGGEHRRNQVFLRPTNVPLLNAPKNSTQFIIDDHENSNLFWNFHDSENEDIDPSNPAGFAVFTGQYFNHQEDQMSPDDDSYWAEYSERDFQTVYETAHQEKIAEWSKKKLVGEISYLEKRQRNLLNSLSLVDPKMYLHKLQSELLSLQEDNRKLRLDLVRSNSSSGSSLVDGKEVPDSTSLTDPGSSSSSSSEDEXPQLMSYQEEESL 295
            MIELMLYENMPNSGTSNGSVGHSVIPDMKRKNRRAKKGRNKNVCKMESVLKGIKKVNENKEEVRLLQDTLRSEILSSECKKSMVKRRSGGEHRRNQVFLRPTNVPLLNAPKNSTQFIIDDHENSNLFWNFHDSENEDIDPSNPAGFAVFTGQYFNHQEDQMSPDDDSYWAEYSERDFQTVYETAHQEKIAEWSKKKLVGEISYLEKRQRNLLNSLSLVDPKMYLHKLQSELLSLQEDNRKLRLDLVRSNSSSGSSLVDGKEVPDSTSLTDPGSSSSSSSEDEXPQLMSYQEEESL
Sbjct:    1 MIELMLYENMPNSGTSNGSVGHSVIPDMKRKNRRAKKGRNKNVCKMESVLKGIKKVNENKEEVRLLQDTLRSEILSSECKKSMVKRRSGGEHRRNQVFLRPTNVPLLNAPKNSTQFIIDDHENSNLFWNFHDSENEDIDPSNPAGFAVFTGQYFNHQEDQMSPDDDSYWAEYSERDFQTVYETAHQEKIAEWSKKKLVGEISYLEKRQRNLLNSLSLVDPKMYLHKLQSELLSLQEDNRKLRLDLVRSNSSSGSSLVDGKEVPDSTSLTDPGSSSSSSSEDEXPQLMSYQEEESL 295

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BLAST of EMLSAG00000003782 vs. Select Arthropod Genomes
Match: gb|EEC11622.1| (hypothetical protein IscW_ISCW009370 [Ixodes scapularis])

HSP 1 Score: 95.9005 bits (237), Expect = 1.710e-22
Identity = 67/183 (36.61%), Postives = 96/183 (52.46%), Query Frame = 0

Query:   93 RRNQVFLRPTNVPLLNAPKNSTQFIIDDHENSNLFWNF----------HDSENEDIDPSNPAGFAVFTGQYFNHQEDQMSPDDDSY-------WAEYSERDFQTVYETAHQEKIAEWSKKKLVGEISYLEKRQRNLLNSLSLVDPKMYLHKLQSELLSLQEDNRK-LRLD--LVRSNSSSGSS 255
            RR+QV +RP  VP   AP N TQFIIDDHEN  L+ +F           DS ++D D   PAG +      F+ + +   P  + Y         E+ E+DF+ VY  A  +++    + ++V   S LE+R   L   L  +DP   L +LQ +LL LQE+NR  LRL+  LVR++  + SS
Sbjct:   71 RRSQVVIRPRQVP--KAPANFTQFIIDDHENCALYQSFEGSSHLQRMRRDSCDDDEDGGAPAGVS-----DFDEEPESSFPAGEHYESLDYGNMVEFYEKDFEAVYSNARVDELLRLPRSEMVDMYSALERRAEELCEQLHSLDPLNCLDELQRQLLRLQEENRALLRLNATLVRAHDPASSS 246

[Close]

BLAST of EMLSAG00000003782 vs. Select Arthropod Genomes
Match: EFX71274.1 (hypothetical protein DAPPUDRAFT_227990 [Daphnia pulex])

HSP 1 Score: 91.2781 bits (225), Expect = 1.993e-20
Identity = 52/151 (34.44%), Postives = 81/151 (53.64%), Query Frame = 0

Query:   93 RRNQVFLRPTNVPLLNAPKNSTQFIIDDHENSNLFWNFHDSENEDIDPSNPAGFAVFTGQYFNHQEDQMSPDDDSYWAEYSERDFQTVYETAHQ-EKIAEWSKKKLVGEISYLEKRQRNLLNSLSLVDPKMYLHKLQSELLSLQEDNRKLR 242
            R  +  LRP  VP   AP+NSTQFIIDDHENS  F +F              GF     +            DD  W+ Y ++DF+ VY T  + E   +W+++ LV +IS LE+R +NL   LS+ D  +Y++++   ++ +Q+ NR+++
Sbjct:   85 RGGRRLLRPAKVP--KAPQNSTQFIIDDHENSAFFIDFD------------KGFTPPGAR------------DDVGWSPYFQQDFENVYRTTREAETTIDWTQEDLVEKISSLEERVKNLEQQLSMCDSNVYMNQMHHRIVCMQDKNRRIK 209

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BLAST of EMLSAG00000003782 vs. Select Arthropod Genomes
Match: gb|KFM57507.1| (hypothetical protein X975_07516, partial [Stegodyphus mimosarum])

HSP 1 Score: 76.2554 bits (186), Expect = 1.074e-14
Identity = 54/155 (34.84%), Postives = 80/155 (51.61%), Query Frame = 0

Query:   97 VFLRPTNVPLLNAPKNSTQFIIDDHENSNLFWNFHDSENEDIDPSNPAG-FAVFTGQYFNHQEDQMSPDDDSYW--------AEYSERDFQTVYETAHQEKIAEWSKKKLVGEISYLEKRQRNLLNSLSLVDPKMYLHKLQSELLSLQEDNRKLR 242
            V +RP NVP   APKNSTQFIIDDH    L+ +F        DPSN  G   + T   F   ED    D D  +        + Y +R+F+  Y++   +++    + +L+   + LE R + L + L++ +P   L KLQ+ELL LQE +  L+
Sbjct:  105 VIIRPVNVP--KAPKNSTQFIIDDHNECRLYMSFETPNPYLADPSNFEGKDCILTEPDF---EDAAYRDIDYEYESPQDFDNSAYYDREFELSYKSNRFDELMLLPRSQLIAAYTNLELRLKELNDELAVENPSHILEKLQAELLELQEKHSFLK 254

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BLAST of EMLSAG00000003782 vs. nr
Match: gi|241573896|ref|XP_002403046.1| (hypothetical protein IscW_ISCW009370 [Ixodes scapularis] >gi|215502128|gb|EEC11622.1| hypothetical protein IscW_ISCW009370 [Ixodes scapularis])

HSP 1 Score: 95.9005 bits (237), Expect = 8.368e-20
Identity = 67/183 (36.61%), Postives = 96/183 (52.46%), Query Frame = 0

Query:   93 RRNQVFLRPTNVPLLNAPKNSTQFIIDDHENSNLFWNF----------HDSENEDIDPSNPAGFAVFTGQYFNHQEDQMSPDDDSY-------WAEYSERDFQTVYETAHQEKIAEWSKKKLVGEISYLEKRQRNLLNSLSLVDPKMYLHKLQSELLSLQEDNRK-LRLD--LVRSNSSSGSS 255
            RR+QV +RP  VP   AP N TQFIIDDHEN  L+ +F           DS ++D D   PAG +      F+ + +   P  + Y         E+ E+DF+ VY  A  +++    + ++V   S LE+R   L   L  +DP   L +LQ +LL LQE+NR  LRL+  LVR++  + SS
Sbjct:   71 RRSQVVIRPRQVP--KAPANFTQFIIDDHENCALYQSFEGSSHLQRMRRDSCDDDEDGGAPAGVS-----DFDEEPESSFPAGEHYESLDYGNMVEFYEKDFEAVYSNARVDELLRLPRSEMVDMYSALERRAEELCEQLHSLDPLNCLDELQRQLLRLQEENRALLRLNATLVRAHDPASSS 246

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BLAST of EMLSAG00000003782 vs. nr
Match: gi|942414637|gb|JAN89248.1| (hypothetical protein [Daphnia magna])

HSP 1 Score: 92.4337 bits (228), Expect = 6.261e-18
Identity = 52/151 (34.44%), Postives = 81/151 (53.64%), Query Frame = 0

Query:   93 RRNQVFLRPTNVPLLNAPKNSTQFIIDDHENSNLFWNFHDSENEDIDPSNPAGFAVFTGQYFNHQEDQMSPDDDSYWAEYSERDFQTVYETAHQ-EKIAEWSKKKLVGEISYLEKRQRNLLNSLSLVDPKMYLHKLQSELLSLQEDNRKLR 242
            R  +  LRP  VP   AP+NSTQFIIDDHENS  F +F              GF     +            DD  W+ Y ++DF+ VY T  + E   +W++  LV +IS LE+R +NL + LS+ D  +Y++++   ++ +Q+ NR+++
Sbjct:   81 RGGRRLLRPAKVP--KAPQNSTQFIIDDHENSAFFIDFD------------KGFTPPGAR------------DDVGWSPYFQQDFENVYRTTREAETTIDWTQDDLVEKISSLEERVKNLEHQLSICDSNVYMNQMHHRIVCMQDKNRRIK 205

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BLAST of EMLSAG00000003782 vs. nr
Match: gi|1022768159|gb|KZS12977.1| (Uncharacterized protein APZ42_022244 [Daphnia magna])

HSP 1 Score: 91.6633 bits (226), Expect = 6.384e-18
Identity = 52/151 (34.44%), Postives = 81/151 (53.64%), Query Frame = 0

Query:   93 RRNQVFLRPTNVPLLNAPKNSTQFIIDDHENSNLFWNFHDSENEDIDPSNPAGFAVFTGQYFNHQEDQMSPDDDSYWAEYSERDFQTVYETAHQ-EKIAEWSKKKLVGEISYLEKRQRNLLNSLSLVDPKMYLHKLQSELLSLQEDNRKLR 242
            R  +  LRP  VP   AP+NSTQFIIDDHENS  F +F              GF     +            DD  W+ Y ++DF+ VY T  + E   +W++  LV +IS LE+R +NL + LS+ D  +Y++++   ++ +Q+ NR+++
Sbjct:   81 RGGRRLLRPAKVP--KAPQNSTQFIIDDHENSAFFIDFD------------KGFTPPGAR------------DDVGWSPYFQQDFENVYRTTREAETTIDWTQDDLVEKISSLEERVKNLEHQLSICDSNVYMNQMHHRIVCMQDKNRRIK 205

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BLAST of EMLSAG00000003782 vs. nr
Match: gi|942302067|gb|JAN32966.1| (hypothetical protein, partial [Daphnia magna])

HSP 1 Score: 90.5077 bits (223), Expect = 7.437e-18
Identity = 52/151 (34.44%), Postives = 81/151 (53.64%), Query Frame = 0

Query:   93 RRNQVFLRPTNVPLLNAPKNSTQFIIDDHENSNLFWNFHDSENEDIDPSNPAGFAVFTGQYFNHQEDQMSPDDDSYWAEYSERDFQTVYETAHQ-EKIAEWSKKKLVGEISYLEKRQRNLLNSLSLVDPKMYLHKLQSELLSLQEDNRKLR 242
            R  +  LRP  VP   AP+NSTQFIIDDHENS  F +F              GF     +            DD  W+ Y ++DF+ VY T  + E   +W++  LV +IS LE+R +NL + LS+ D  +Y++++   ++ +Q+ NR+++
Sbjct:   81 RGGRRLLRPAKVP--KAPQNSTQFIIDDHENSAFFIDFD------------KGFTPPGAR------------DDVGWSPYFQQDFENVYRTTREAETTIDWTQDDLVEKISSLEERVKNLEHQLSICDSNVYMNQMHHRIVCMQDKNRRIK 205

[Close]

BLAST of EMLSAG00000003782 vs. nr
Match: gi|321460230|gb|EFX71274.1| (hypothetical protein DAPPUDRAFT_227990 [Daphnia pulex])

HSP 1 Score: 91.2781 bits (225), Expect = 9.751e-18
Identity = 52/151 (34.44%), Postives = 81/151 (53.64%), Query Frame = 0

Query:   93 RRNQVFLRPTNVPLLNAPKNSTQFIIDDHENSNLFWNFHDSENEDIDPSNPAGFAVFTGQYFNHQEDQMSPDDDSYWAEYSERDFQTVYETAHQ-EKIAEWSKKKLVGEISYLEKRQRNLLNSLSLVDPKMYLHKLQSELLSLQEDNRKLR 242
            R  +  LRP  VP   AP+NSTQFIIDDHENS  F +F              GF     +            DD  W+ Y ++DF+ VY T  + E   +W+++ LV +IS LE+R +NL   LS+ D  +Y++++   ++ +Q+ NR+++
Sbjct:   85 RGGRRLLRPAKVP--KAPQNSTQFIIDDHENSAFFIDFD------------KGFTPPGAR------------DDVGWSPYFQQDFENVYRTTREAETTIDWTQEDLVEKISSLEERVKNLEQQLSMCDSNVYMNQMHHRIVCMQDKNRRIK 209

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BLAST of EMLSAG00000003782 vs. nr
Match: gi|1073704377|gb|JAT95245.1| (hypothetical protein [Amblyomma aureolatum])

HSP 1 Score: 85.8853 bits (211), Expect = 1.093e-15
Identity = 60/182 (32.97%), Postives = 92/182 (50.55%), Query Frame = 0

Query:   74 ILSSECKKSMVKRRSGGEHRRNQVFLRPTNVPLLNAPKNSTQFIIDDHENSNLFWNF-------HDSENEDIDPSNPAGFAVFTGQYFNHQEDQMSPDDDSYWA-------EYSERDFQTVYETAHQEKIAEWSKKKLVGEISYLEKRQRNLLNSLSLVDPKMYLHKLQSELLSLQEDNRKL 241
            +LSS    S  KR S  + R+ QV +RP  VP   AP N TQFIIDDHEN  L+ +F       H    +D D   P    + T +    +     P  + Y +       ++ E+DF+ VY +A  +++   S+ ++    + LE+R   L + L  VDP+  L +LQ +LL LQ++N+ L
Sbjct:   65 VLSSSDAASPAKR-SPPKRRKKQVMIRPREVP--KAPANFTQFIIDDHENCALYQSFEAAYPNGHSDVADDTD-CRPTDLRLQTDESGEEEPQSWFPAGEHYESLDYGNMMKFYEKDFEAVYSSARMDELMRLSRCEVADMYAALERRAAQLYDELHKVDPQNCLDELQRQLLRLQDENQAL 242

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BLAST of EMLSAG00000003782 vs. nr
Match: gi|1067064433|ref|XP_018016161.1| (PREDICTED: protein HEXIM1-like isoform X2 [Hyalella azteca])

HSP 1 Score: 79.7221 bits (195), Expect = 3.202e-13
Identity = 52/149 (34.90%), Postives = 81/149 (54.36%), Query Frame = 0

Query:   98 FLRPTNVPLLNAPKNSTQFIIDDHENSNLFWNFHDSENEDIDPSNPAGFAVFTGQYFNHQEDQMSPDDDSYWAE----YSERDFQTVYETAHQEKIAEWSKKKLVGEISYLEKRQRNLLNSLSLVDPKMYLHKLQSELLSLQEDNRKLR 242
             LRP    +  AP+NSTQFI+D+HE+SNLF+NF        D +N +  A                +D+S+  +    YS+ +F+T+Y ++H+E +   +  +L   I +LE R   L + ++   P + L  LQS L+ LQE+NRKLR
Sbjct:  225 VLRPFGSQVPRAPENSTQFIMDNHEDSNLFFNF--------DSNNVSSAA----------------EDESFKCDLLDAYSQAEFETLYRSSHEESLMNSTMVELKTAIIHLESRCATLEHKIA-SRPSVLLDSLQSSLIKLQEENRKLR 348

[Close]

BLAST of EMLSAG00000003782 vs. nr
Match: gi|1067064431|ref|XP_018016160.1| (PREDICTED: protein HEXIM1-like isoform X1 [Hyalella azteca])

HSP 1 Score: 79.337 bits (194), Expect = 3.714e-13
Identity = 52/149 (34.90%), Postives = 81/149 (54.36%), Query Frame = 0

Query:   98 FLRPTNVPLLNAPKNSTQFIIDDHENSNLFWNFHDSENEDIDPSNPAGFAVFTGQYFNHQEDQMSPDDDSYWAE----YSERDFQTVYETAHQEKIAEWSKKKLVGEISYLEKRQRNLLNSLSLVDPKMYLHKLQSELLSLQEDNRKLR 242
             LRP    +  AP+NSTQFI+D+HE+SNLF+NF        D +N +  A                +D+S+  +    YS+ +F+T+Y ++H+E +   +  +L   I +LE R   L + ++   P + L  LQS L+ LQE+NRKLR
Sbjct:  244 VLRPFGSQVPRAPENSTQFIMDNHEDSNLFFNF--------DSNNVSSAA----------------EDESFKCDLLDAYSQAEFETLYRSSHEESLMNSTMVELKTAIIHLESRCATLEHKIA-SRPSVLLDSLQSSLIKLQEENRKLR 367

[Close]

BLAST of EMLSAG00000003782 vs. nr
Match: gi|675364605|gb|KFM57507.1| (hypothetical protein X975_07516, partial [Stegodyphus mimosarum])

HSP 1 Score: 76.2554 bits (186), Expect = 5.255e-12
Identity = 54/155 (34.84%), Postives = 80/155 (51.61%), Query Frame = 0

Query:   97 VFLRPTNVPLLNAPKNSTQFIIDDHENSNLFWNFHDSENEDIDPSNPAG-FAVFTGQYFNHQEDQMSPDDDSYW--------AEYSERDFQTVYETAHQEKIAEWSKKKLVGEISYLEKRQRNLLNSLSLVDPKMYLHKLQSELLSLQEDNRKLR 242
            V +RP NVP   APKNSTQFIIDDH    L+ +F        DPSN  G   + T   F   ED    D D  +        + Y +R+F+  Y++   +++    + +L+   + LE R + L + L++ +P   L KLQ+ELL LQE +  L+
Sbjct:  105 VIIRPVNVP--KAPKNSTQFIIDDHNECRLYMSFETPNPYLADPSNFEGKDCILTEPDF---EDAAYRDIDYEYESPQDFDNSAYYDREFELSYKSNRFDELMLLPRSQLIAAYTNLELRLKELNDELAVENPSHILEKLQAELLELQEKHSFLK 254

[Close]

BLAST of EMLSAG00000003782 vs. nr
Match: gi|1078806631|ref|XP_018495559.1| (PREDICTED: uncharacterized protein LOC108864430 [Galendromus occidentalis])

HSP 1 Score: 74.7146 bits (182), Expect = 1.255e-11
Identity = 61/172 (35.47%), Postives = 84/172 (48.84%), Query Frame = 0

Query:   83 MVKRRSG-GEHRRNQVFLRPTNVPLLNAPKNSTQFIIDDHENS--NLFWNF---------HDSENEDIDPSNPAGFAVFTGQYFNHQEDQMSPDDDSYWAEYSERDFQTVYETAHQEKIAEWSKKKLVGEISYLEKRQRNLLNSLSLVDPKMYLHKLQSELLSLQEDNRKLR 242
            M K RS  G  ++  V +RP NVP   AP N TQFIIDDH  S   L+ +F          +S +E   P +   +   +    NHQ     P D S    + E+DF+ VY  A   ++ E    +LV     +EKR+  L  +LS+  P+  L  LQ  LL LQE+NR L+
Sbjct:  101 MRKDRSHRGLLKKRCVQIRPWNVP--QAPANFTQFIIDDHFESCPGLYQSFETPPVSSHRRNSSSESDAPHSSVNYD--SDDLVNHQ-----PFDYSQMLAFHEKDFEEVYSDARAAEVIELPHDQLVNMYCEMEKRETQLSTTLSIYSPQHLLEHLQRRLLDLQEENRVLK 263

[Close]

BLAST of EMLSAG00000003782 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold98_size375582-snap-gene-2.33 (protein:Tk06129 transcript:maker-scaffold98_size375582-snap-gene-2.33-mRNA-1 annotation:"hypothetical protein DAPPUDRAFT_227990")

HSP 1 Score: 159.073 bits (401), Expect = 5.077e-47
Identity = 80/159 (50.31%), Postives = 106/159 (66.67%), Query Frame = 0

Query:   88 SGGEHRRNQVFLRPTNVPLLNAPKNSTQFIIDDHENSNLFWNFHDSENEDIDPSNPAGFAVFTGQYFN----HQEDQMSPDDDSYWAEYSERDFQTVYETAHQEKIAEWSKKKLVGEISYLEKRQRNLLNSLSLVDPKMYLHKLQSELLSLQEDNRKLR 242
            +    ++  V+LRPTN PLLNAP+NSTQFII+DHEN                   P G A    +  +     + + +SPDDD++W +YSERDFQ+VYETAHQE++AEW +KKL  EI+ LE+RQ+ L+  L+ VDP++YL KLQSEL SLQE NR+LR
Sbjct:  101 TASNKKKRPVYLRPTNGPLLNAPRNSTQFIINDHENEIGLGGEGGE-------CEPLGAAAPRTRSLSDAARERRENISPDDDTFWVDYSERDFQSVYETAHQEEVAEWDRKKLCDEIATLERRQKELIAILARVDPEIYLQKLQSELTSLQEANRRLR 252

The following BLAST results are available for this feature:

BLAST of EMLSAG00000003782 vs. GO
BLAST of EMLSAG00000003782 vs. C. finmarchicus
BLAST of EMLSAG00000003782 vs. L. salmonis peptides
BLAST of EMLSAG00000003782 vs. SwissProt
BLAST of EMLSAG00000003782 vs. Select Arthropod Genomes
BLAST of EMLSAG00000003782 vs. nr
BLAST of EMLSAG00000003782 vs. Tigriopus kingsejongenis genes

BLAST of EMLSAG00000003782 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000003782 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 3


Match Name	E-value	Identity	Description
gi\|592854596\|gb\|GAXK01102948.1\|	3.169e-50	50.00	TSA: Calanus finmarchicus comp61430_c0_seq2 transc...	[more]
gi\|592854597\|gb\|GAXK01102947.1\|	3.324e-50	50.00	TSA: Calanus finmarchicus comp61430_c0_seq1 transc...	[more]
gi\|592823088\|gb\|GAXK01131480.1\|	9.584e+0	25.25	TSA: Calanus finmarchicus comp161860_c0_seq1 trans...	[more]

BLAST of EMLSAG00000003782 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1


Match Name	E-value	Identity	Description
EMLSAP00000003782	0.000e+0	100.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s204:55448...	[more]

BLAST of EMLSAG00000003782 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000003782 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 3


Match Name	E-value	Identity	Description
gb\|EEC11622.1\|	1.710e-22	36.61	hypothetical protein IscW_ISCW009370 [Ixodes scapu...	[more]
EFX71274.1	1.993e-20	34.44	hypothetical protein DAPPUDRAFT_227990 [Daphnia pu...	[more]
gb\|KFM57507.1\|	1.074e-14	34.84	hypothetical protein X975_07516, partial [Stegodyp...	[more]

BLAST of EMLSAG00000003782 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 12


Match Name	E-value	Identity	Description
gi\|241573896\|ref\|XP_002403046.1\|	8.368e-20	36.61	hypothetical protein IscW_ISCW009370 [Ixodes scapu...	[more]
gi\|942414637\|gb\|JAN89248.1\|	6.261e-18	34.44	hypothetical protein [Daphnia magna]	[more]
gi\|1022768159\|gb\|KZS12977.1\|	6.384e-18	34.44	Uncharacterized protein APZ42_022244 [Daphnia magn...	[more]
gi\|942302067\|gb\|JAN32966.1\|	7.437e-18	34.44	hypothetical protein, partial [Daphnia magna]	[more]
gi\|321460230\|gb\|EFX71274.1\|	9.751e-18	34.44	hypothetical protein DAPPUDRAFT_227990 [Daphnia pu...	[more]
gi\|1073704377\|gb\|JAT95245.1\|	1.093e-15	32.97	hypothetical protein [Amblyomma aureolatum]	[more]
gi\|1067064433\|ref\|XP_018016161.1\|	3.202e-13	34.90	PREDICTED: protein HEXIM1-like isoform X2 [Hyalell...	[more]
gi\|1067064431\|ref\|XP_018016160.1\|	3.714e-13	34.90	PREDICTED: protein HEXIM1-like isoform X1 [Hyalell...	[more]
gi\|675364605\|gb\|KFM57507.1\|	5.255e-12	34.84	hypothetical protein X975_07516, partial [Stegodyp...	[more]
gi\|1078806631\|ref\|XP_018495559.1\|	1.255e-11	35.47	PREDICTED: uncharacterized protein LOC108864430 [G...	[more]

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BLAST of EMLSAG00000003782 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 1


Match Name	E-value	Identity	Description
maker-scaffold98_size375582-snap-gene-2.33	5.077e-47	50.31	protein:Tk06129 transcript:maker-scaffold98_size37...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s204	supercontig	LSalAtl2s204:554488..557483 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016
Blast vs. GO	2014-04-02
TblastN vs C. finmarchicus TSA	2014-05-09
Blastp vs. self	2014-05-10
Blastp vs. SwissProt	2017-02-10
Blastp vs. Selected Arthropods	2017-02-20
Blastp vs. NR (2/2017)	2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins	2018-04-18

Properties


Property Name	Value
Logic name	ensemblgenomes
Description	snap_masked-LSalAtl2s204-processed-gene-5.6
Biotype	protein_coding
Evidence	IEA
Note	hypothetical protein IscW_ISCW009370 [Ixodes scapularis]

Cross References

External references for this gene


Database	Accession
Ensembl Metazoa (gene)	EMLSAG00000003782 (primary cross-reference)

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
EMLSAT00000003782	EMLSAT00000003782-699629	Lepeophtheirus salmonis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at LSalAtl2s204:554488..557483+

gene from alignment at LSalAtl2s204:554488..557483+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAG00000003782-686548 ID=EMLSAG00000003782-686548|Name=EMLSAG00000003782|organism=Lepeophtheirus salmonis|type=gene|length=2996bp|location=Sequence derived from alignment at LSalAtl2s204:554488..557483+ (Lepeophtheirus salmonis)
TGAATTTCGTACAATGTATAGAAATAAAGAAGAGAAGGTTAAAAACAGTT
TTTCCTGTATAAAAACGAGTCCGTTTTATTCTTCCTCTTTCTCCTTTTTT
TTGTTAAAAAAAAGAAGCGCACGCCAGATTTGGCAATATGTTGTTTACAA
TAGTATCGCCCTCTTTTGTTCTCCTTTTGGATCGTATGTTATGTTATACG
AGAGAGAGCGCTAGGTGTCGCTGTTACACGTTTTAATCCTTCCCCCTCTA
AAAAAAAAACGACGACCAAAATTTTTCTTATTAGTCCATTGCGCCTTTCC
TCCTTTCAGATTCAATTTGAAGTTTCAAGAGGGAAGATCTCCCTTTTACC
CGTGGAGAAGGAGGAAAGAATACTTGTCAAGTCTCGATATTAAATTATTT
TTATCTGGAATTTATTTCTATACGGTATGTAAAATAATTTTTTTTTTGTG
TGTGTAGTTTTARTATGTAGAATATTTTTTTAATGTTATGAAAATGTGAA
GAGTGGTGAAACAAAGACTCGTTATGGGCCTCCTTGCACGCGTGCTCCCC
TTCTTATTTTCTGATCGCCCGCCTGAAAAGTTTATTGTACTGCCTATTTA
GCCTTGATTGCTCCAAAGAGGCGTTTTAATGAGGATATGATAGGTGACGT
CACTATTCTCCCACCTTTTTTTTGAATTTCCTCCATTTTAACTCTGGGAC
TCTTGATTCTATTGGGAGTTGGTTAAATCCCTCCTTACGTACTCTAGTAA
AGTTGAGTGATTGCTATAATTTATGTTCCGACTCTTGTGCATTATTTCAT
TATGTGCTCAAGGACTGCATACACTTCTTCATCCTCTTAAACCATAGTCC
TCTTTTAAAGGATGAAATAAAATAAATTTTACTCTTGAGCTTTTAGCGGA
GTCAACGTCATGATTTTTATAGATAGTTAGTATTGCGTTGTCAGGGAAGT
TTTCTGAGATTTTTTCCACAATGGATTAATAATTCATTTAACTTGGAATA
CATTCATATATGGTTAATCGAAAGTGGGAATATTTCCTCTCCTCTTAAAG
CGCTCTTGATAGGTGCTTAATCCATTTCTCCCCCTTTATTTTTTTTCCCG
CGATTAATTTGAATCTTATATTTAAAATTTCATTTTAGTAAGGGAACAAG
GAATTTCTATAACATGTCTACGACATGTTAACTCTGTTGTAAGCAACTGG
GCTTTTTTCCTTTTCATATTTTAATGGTGTGATATACATGTATATACATG
ACACCTTAAATATATATGTATATATAAAGAAAGCGTTGCTGAGTTGGCAA
TAAAAGTTCCCTTCATTTTTCCTCTCATGGATGATGACTTTACTACTCTA
TCGATGGAAAATACTTTGATAAACATTAAATTTCTCCCCACTTTTAAATA
TGTTGAGTATTATTTGACAGAAGGAGTGAGTAAAAAATAGGAATATGAAT
TAAAATAAAGCAATTCATTTTGGTTTAAATGACATGGGGTTTCGTTAATC
AAGGACAACTTAACTTAATCTAATTTAAGGAAATTATTGACAAATTAACC
CTTCATTACAACCATTGAATTTATACTTTATTTACTTAAAAAATAATAAA
AGAGTACCTCGTAAATAATTTTTTATGAGCTTTGGGGATGTTGTCATCAA
TAACTAAGATCGTTTCTATATATTATAATAAATTTAATTATTTTTCCATT
AACAGAGCTAATGTTATATGAAAATATGCCTAATTCCGGTACAAGTAATG
GCTCTGTTGGGCACAGCGTTATACCAGATATGAAACGAAAGAATAGACGA
GCGAAGAAGGGACGGAATAAGAACGTTTGTAAAATGGAATCAGTTTTGAA
AGGGATAAAGAAAGTCAATGAAAATAAGGAGGAAGTACGTCTCCTTCAGG
ATACATTGCGATCCGAGATACTTAGCTCTGAATGTAAAAAGTCTATGGTC
AAGCGAAGAAGTGGTGGTGAGCATCGAAGGAATCAAGTATTTTTACGACC
AACCAATGTTCCTTTGTTAAATGCTCCTAAAAACTCTACACAATTTATCA
TTGATGACCACGAAAATTCAAATCTATTTTGGAACTTTCATGATAGCGAA
AATGAGGATATTGATCCATCAAACCCTGCTGGATTCGCTGTATTTACTGG
TAATACATTATACTATATCTTTAAAAAAATATTTCTAGAACTATCTTCTG
TTTATAGGACAATATTTCAATCATCAAGAGGATCAAATGTCTCCGGATGA
CGACTCCTATTGGGCAGAGTATTCTGAGAGAGACTTTCAAACAGTGTATG
AAACGGCACATCAAGAAAAGATTGCTGAATGGAGCAAAAAGAAATTGGTG
GGTGAGATTTCATATTTAGAAAAAAGACAAAGAAACCTCCTCAACTCTCT
TTCCTTGGTGGATCCCAAAATGTACTTGCATAAACTTCAGTCTGAACTGT
TGAGTCTTCAAGAAGATAATCGTAAGCTTAGATTGGATCTTGTTCGTTCT
AATAGTTCATCGGGTTCCTCTTTAGTCGATGGTAAAGAAGTACCTGACTC
CACATCCCTAACGGACCCTGGATCCTCTTCTTCATCGTCCTCAGAAGATG
AAGAKCCGCAACTGATGTCATACCAAGAGGAAGAGTCCCTTTAGGATTTG
AGTCTTCTTGGACCAAAAAGAAGAATCGATCATACGGTGTTTCGGTCCTT
TACTTTAGTTAGTTAGAGATCTTTCACTCTACAAAATCATGCACATTAAA
AAATAACACAAATTTCCATCGATGATCGCGCACATCTCCTCTTCGTATCC
TCAGTGTATTTGCTCCATTTATACAATGAATAAATAGTCTTTCTTTCATT
TGAGTTGTTTAGATTATGCCAGGATTTAATTAACTGACTTAATTATTTCT
GATTTAGAATTATATATCCATGAATATATATATATATATATATATATGTC
ACTATTAATTAATAATGATTATATTTATTTATTAAAATGAATTTAC

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