EMLSAG00000003884, EMLSAG00000003884-686650 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000003884
Unique NameEMLSAG00000003884-686650
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of EMLSAG00000003884 vs. GO
Match: - (symbol:SRRM1 "Serine/arginine repetitive matrix protein 1" species:9031 "Gallus gallus" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR002483 Pfam:PF01480 PROSITE:PS51025 SMART:SM00311 GO:GO:0006397 Gene3D:1.20.1390.10 SUPFAM:SSF101233 OrthoDB:EOG786H40 TreeFam:TF318972 GeneTree:ENSGT00730000111080 EMBL:AADN03008189 Ensembl:ENSGALT00000001959 Uniprot:E1BQL2)

HSP 1 Score: 144.05 bits (362), Expect = 5.730e-39
Identity = 70/98 (71.43%), Postives = 85/98 (86.73%), Query Frame = 0 
Query:    3 DAGXFRGXSAXQDNRFSDKEKKLLKQMRFEEILATKIDLTKVKLDVLKPWITKKIAALLGMEDDVVVEFIFNQLEIKNPDPRKMQINLTGFLNGKNAR 100
            DAG FRG SA QDNRFS+K+KKLLKQ++F E L  K+D++KV L+V+KPWITK++  +LG EDDVV+EFIFNQLE+KNPD + MQINLTGFLNGKNAR
Sbjct:    2 DAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAR 99
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BLAST of EMLSAG00000003884 vs. GO
Match: - (symbol:Srrm1 "serine/arginine repetitive matrix 1" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA] [GO:0044822 "poly(A) RNA binding" evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR002483 Pfam:PF01480 PROSITE:PS51025 SMART:SM00311 RGD:1311258 GO:GO:0006397 GO:GO:0071013 Gene3D:1.20.1390.10 SUPFAM:SSF101233 CTD:10250 eggNOG:NOG330576 HOVERGEN:HBG054044 KO:K13171 HOGENOM:HOG000231139 OrthoDB:EOG786H40 OMA:ILKAPKP GeneTree:ENSGT00730000111080 EMBL:AABR06040400 EMBL:BC166715 RefSeq:NP_001101456.2 UniGene:Rn.39266 STRING:10116.ENSRNOP00000052957 Ensembl:ENSRNOT00000056105 GeneID:313620 KEGG:rno:313620 NextBio:666566 Genevestigator:B2RYB3 Uniprot:B2RYB3)

HSP 1 Score: 144.05 bits (362), Expect = 5.921e-39
Identity = 70/98 (71.43%), Postives = 85/98 (86.73%), Query Frame = 0 
Query:    3 DAGXFRGXSAXQDNRFSDKEKKLLKQMRFEEILATKIDLTKVKLDVLKPWITKKIAALLGMEDDVVVEFIFNQLEIKNPDPRKMQINLTGFLNGKNAR 100
            DAG FRG SA QDNRFS+K+KKLLKQ++F E L  K+D++KV L+V+KPWITK++  +LG EDDVV+EFIFNQLE+KNPD + MQINLTGFLNGKNAR
Sbjct:    2 DAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAR 99
[Close]
BLAST of EMLSAG00000003884 vs. GO
Match: - (symbol:SRRM1 "Serine/arginine repetitive matrix protein 1" species:9031 "Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] InterPro:IPR002483 Pfam:PF01480 PROSITE:PS51025 SMART:SM00311 GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 Gene3D:1.20.1390.10 SUPFAM:SSF101233 EMBL:AJ719385 RefSeq:NP_001026665.1 UniGene:Gga.4399 ProteinModelPortal:Q5ZMJ9 SMR:Q5ZMJ9 STRING:9031.ENSGALP00000001957 PaxDb:Q5ZMJ9 PRIDE:Q5ZMJ9 GeneID:428216 KEGG:gga:428216 CTD:10250 eggNOG:NOG330576 HOVERGEN:HBG054044 InParanoid:Q5ZMJ9 KO:K13171 NextBio:20829263 PRO:PR:Q5ZMJ9 Uniprot:Q5ZMJ9)

HSP 1 Score: 144.05 bits (362), Expect = 6.078e-39
Identity = 70/98 (71.43%), Postives = 85/98 (86.73%), Query Frame = 0 
Query:    3 DAGXFRGXSAXQDNRFSDKEKKLLKQMRFEEILATKIDLTKVKLDVLKPWITKKIAALLGMEDDVVVEFIFNQLEIKNPDPRKMQINLTGFLNGKNAR 100
            DAG FRG SA QDNRFS+K+KKLLKQ++F E L  K+D++KV L+V+KPWITK++  +LG EDDVV+EFIFNQLE+KNPD + MQINLTGFLNGKNAR
Sbjct:    2 DAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAR 99
[Close]
BLAST of EMLSAG00000003884 vs. GO
Match: - (symbol:SRRM1 "Uncharacterized protein" species:9913 "Bos taurus" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR002483 Pfam:PF01480 PROSITE:PS51025 SMART:SM00311 GO:GO:0006397 GO:GO:0071013 Gene3D:1.20.1390.10 SUPFAM:SSF101233 CTD:10250 KO:K13171 OrthoDB:EOG786H40 TreeFam:TF318972 GeneTree:ENSGT00730000111080 EMBL:DAAA02006406 EMBL:DAAA02006407 RefSeq:XP_001252332.2 RefSeq:XP_002685753.2 UniGene:Bt.109560 Ensembl:ENSBTAT00000061408 GeneID:784123 KEGG:bta:784123 OMA:SAKIKEP Uniprot:E1BP16)

HSP 1 Score: 143.665 bits (361), Expect = 6.606e-39
Identity = 70/98 (71.43%), Postives = 85/98 (86.73%), Query Frame = 0 
Query:    3 DAGXFRGXSAXQDNRFSDKEKKLLKQMRFEEILATKIDLTKVKLDVLKPWITKKIAALLGMEDDVVVEFIFNQLEIKNPDPRKMQINLTGFLNGKNAR 100
            DAG FRG SA QDNRFS+K+KKLLKQ++F E L  K+D++KV L+V+KPWITK++  +LG EDDVV+EFIFNQLE+KNPD + MQINLTGFLNGKNAR
Sbjct:    2 DAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAR 99
[Close]
BLAST of EMLSAG00000003884 vs. GO
Match: - (symbol:Srrm1 "serine/arginine repetitive matrix 1" species:10090 "Mus musculus" [GO:0000375 "RNA splicing, via transesterification reactions" evidence=ISO] [GO:0000398 "mRNA splicing, via spliceosome" evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016363 "nuclear matrix" evidence=ISO] [GO:0044822 "poly(A) RNA binding" evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR002483 Pfam:PF01480 PROSITE:PS51025 SMART:SM00311 MGI:MGI:1858303 GO:GO:0003677 GO:GO:0016607 GO:GO:0005681 GO:GO:0016363 GO:GO:0000398 GO:GO:0071013 Gene3D:1.20.1390.10 SUPFAM:SSF101233 EMBL:AL627185 CTD:10250 eggNOG:NOG330576 HOVERGEN:HBG054044 KO:K13171 ChiTaRS:SRRM1 EMBL:AF062655 EMBL:AL627078 EMBL:BC094322 EMBL:AK008284 RefSeq:NP_058079.2 UniGene:Mm.1963 ProteinModelPortal:Q52KI8 SMR:Q52KI8 BioGrid:206179 IntAct:Q52KI8 MINT:MINT-1867213 PhosphoSite:Q52KI8 PaxDb:Q52KI8 PRIDE:Q52KI8 GeneID:51796 KEGG:mmu:51796 HOGENOM:HOG000168326 InParanoid:Q52KI8 NextBio:308036 PRO:PR:Q52KI8 ArrayExpress:Q52KI8 Bgee:Q52KI8 CleanEx:MM_SRRM1 Genevestigator:Q52KI8 Uniprot:Q52KI8)

HSP 1 Score: 144.05 bits (362), Expect = 6.804e-39
Identity = 70/98 (71.43%), Postives = 85/98 (86.73%), Query Frame = 0 
Query:    3 DAGXFRGXSAXQDNRFSDKEKKLLKQMRFEEILATKIDLTKVKLDVLKPWITKKIAALLGMEDDVVVEFIFNQLEIKNPDPRKMQINLTGFLNGKNAR 100
            DAG FRG SA QDNRFS+K+KKLLKQ++F E L  K+D++KV L+V+KPWITK++  +LG EDDVV+EFIFNQLE+KNPD + MQINLTGFLNGKNAR
Sbjct:    2 DAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAR 99
[Close]
BLAST of EMLSAG00000003884 vs. GO
Match: - (symbol:SRRM1 "Serine/arginine repetitive matrix protein 1" species:9606 "Homo sapiens" [GO:0000375 "RNA splicing, via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;TAS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006366 "transcription from RNA polymerase II promoter" evidence=TAS] [GO:0006369 "termination of RNA polymerase II transcription" evidence=TAS] [GO:0006406 "mRNA export from nucleus" evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS] [GO:0016363 "nuclear matrix" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0031124 "mRNA 3'-end processing" evidence=TAS] [GO:0044822 "poly(A) RNA binding" evidence=IDA] [GO:0071013 "catalytic step 2 spliceosome" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR002483 Pfam:PF01480 PROSITE:PS51025 SMART:SM00311 EMBL:AF048977 GO:GO:0005829 GO:GO:0005654 GO:GO:0003677 GO:GO:0016607 GO:GO:0003723 TCDB:3.A.18.1.1 GO:GO:0006406 GO:GO:0016363 GO:GO:0000398 GO:GO:0071013 Reactome:REACT_1788 Gene3D:1.20.1390.10 GO:GO:0006369 GO:GO:0031124 Reactome:REACT_78 EMBL:AL445686 SUPFAM:SSF101233 CTD:10250 HOVERGEN:HBG054044 KO:K13171 EMBL:AF419855 EMBL:AL445648 EMBL:BC036187 RefSeq:NP_005830.2 UniGene:Hs.18192 PDB:1MP1 PDBsum:1MP1 ProteinModelPortal:Q8IYB3 SMR:Q8IYB3 BioGrid:115544 IntAct:Q8IYB3 MINT:MINT-1683977 STRING:9606.ENSP00000326261 PhosphoSite:Q8IYB3 DMDM:83305833 PaxDb:Q8IYB3 PRIDE:Q8IYB3 Ensembl:ENST00000323848 GeneID:10250 KEGG:hsa:10250 UCSC:uc001bjm.3 GeneCards:GC01P024958 H-InvDB:HIX0023530 H-InvDB:HIX0160039 HGNC:HGNC:16638 HPA:HPA049941 HPA:HPA058612 MIM:605975 neXtProt:NX_Q8IYB3 PharmGKB:PA38177 eggNOG:NOG242213 HOGENOM:HOG000231139 OrthoDB:EOG786H40 PhylomeDB:Q8IYB3 TreeFam:TF318972 ChiTaRS:SRRM1 EvolutionaryTrace:Q8IYB3 GeneWiki:SRRM1 GenomeRNAi:10250 NextBio:38838 PMAP-CutDB:Q8IYB3 PRO:PR:Q8IYB3 ArrayExpress:Q8IYB3 Bgee:Q8IYB3 CleanEx:HS_SRRM1 Genevestigator:Q8IYB3 Uniprot:Q8IYB3)

HSP 1 Score: 143.665 bits (361), Expect = 8.758e-39
Identity = 70/98 (71.43%), Postives = 85/98 (86.73%), Query Frame = 0 
Query:    3 DAGXFRGXSAXQDNRFSDKEKKLLKQMRFEEILATKIDLTKVKLDVLKPWITKKIAALLGMEDDVVVEFIFNQLEIKNPDPRKMQINLTGFLNGKNAR 100
            DAG FRG SA QDNRFS+K+KKLLKQ++F E L  K+D++KV L+V+KPWITK++  +LG EDDVV+EFIFNQLE+KNPD + MQINLTGFLNGKNAR
Sbjct:    2 DAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAR 99
[Close]
BLAST of EMLSAG00000003884 vs. GO
Match: - (symbol:SRRM1 "Serine/arginine repetitive matrix protein 1" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0006397 "mRNA processing" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002483 Pfam:PF01480 PROSITE:PS51025 SMART:SM00311 GO:GO:0006397 Gene3D:1.20.1390.10 EMBL:AL445686 SUPFAM:SSF101233 CTD:10250 KO:K13171 EMBL:AL445648 UniGene:Hs.18192 GeneID:10250 KEGG:hsa:10250 HGNC:HGNC:16638 ChiTaRS:SRRM1 RefSeq:XP_005245776.1 ProteinModelPortal:E9PCT1 SMR:E9PCT1 PRIDE:E9PCT1 Ensembl:ENST00000447431 UCSC:uc009vrh.1 OMA:ILKAPKP NextBio:35501553 ArrayExpress:E9PCT1 Bgee:E9PCT1 Uniprot:E9PCT1)

HSP 1 Score: 143.28 bits (360), Expect = 9.384e-39
Identity = 70/98 (71.43%), Postives = 85/98 (86.73%), Query Frame = 0 
Query:    3 DAGXFRGXSAXQDNRFSDKEKKLLKQMRFEEILATKIDLTKVKLDVLKPWITKKIAALLGMEDDVVVEFIFNQLEIKNPDPRKMQINLTGFLNGKNAR 100
            DAG FRG SA QDNRFS+K+KKLLKQ++F E L  K+D++KV L+V+KPWITK++  +LG EDDVV+EFIFNQLE+KNPD + MQINLTGFLNGKNAR
Sbjct:    2 DAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAR 99
[Close]
BLAST of EMLSAG00000003884 vs. GO
Match: - (symbol:SRRM1 "Serine/arginine repetitive matrix protein 1" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0006397 "mRNA processing" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002483 Pfam:PF01480 PROSITE:PS51025 SMART:SM00311 GO:GO:0006397 Gene3D:1.20.1390.10 EMBL:AL445686 SUPFAM:SSF101233 HOVERGEN:HBG054044 EMBL:AL445648 HGNC:HGNC:16638 ChiTaRS:SRRM1 ProteinModelPortal:A9Z1X7 SMR:A9Z1X7 PRIDE:A9Z1X7 Ensembl:ENST00000374389 NextBio:35465462 ArrayExpress:A9Z1X7 Uniprot:A9Z1X7)

HSP 1 Score: 143.28 bits (360), Expect = 1.007e-38
Identity = 70/98 (71.43%), Postives = 85/98 (86.73%), Query Frame = 0 
Query:    3 DAGXFRGXSAXQDNRFSDKEKKLLKQMRFEEILATKIDLTKVKLDVLKPWITKKIAALLGMEDDVVVEFIFNQLEIKNPDPRKMQINLTGFLNGKNAR 100
            DAG FRG SA QDNRFS+K+KKLLKQ++F E L  K+D++KV L+V+KPWITK++  +LG EDDVV+EFIFNQLE+KNPD + MQINLTGFLNGKNAR
Sbjct:    2 DAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAR 99
[Close]
BLAST of EMLSAG00000003884 vs. GO
Match: - (symbol:srrm1 "serine/arginine repetitive matrix 1" species:7955 "Danio rerio" [GO:0006397 "mRNA processing" evidence=IEA] InterPro:IPR002483 Pfam:PF01480 PROSITE:PS51025 SMART:SM00311 ZFIN:ZDB-GENE-040426-2789 GO:GO:0006397 Gene3D:1.20.1390.10 SUPFAM:SSF101233 CTD:10250 KO:K13171 TreeFam:TF318972 GeneTree:ENSGT00730000111080 OMA:REFMRDL EMBL:CU972452 RefSeq:XP_005158559.1 UniGene:Dr.20025 Ensembl:ENSDART00000121848 GeneID:406751 KEGG:dre:406751 PRO:PR:E7F1X7 ArrayExpress:E7F1X7 Uniprot:E7F1X7)

HSP 1 Score: 140.584 bits (353), Expect = 1.127e-37
Identity = 69/98 (70.41%), Postives = 83/98 (84.69%), Query Frame = 0 
Query:    3 DAGXFRGXSAXQDNRFSDKEKKLLKQMRFEEILATKIDLTKVKLDVLKPWITKKIAALLGMEDDVVVEFIFNQLEIKNPDPRKMQINLTGFLNGKNAR 100
            DAG FRG SA QDNRFS+K KKLLKQ++F E L  K+D+TKV L+V+KPWIT+++  +LG EDDVV+EF+FNQLE KNPD + MQINLTGFLNGKNAR
Sbjct:    2 DAGFFRGTSAEQDNRFSNKHKKLLKQLKFAECLEKKVDMTKVNLEVIKPWITQRVTEILGFEDDVVIEFVFNQLEEKNPDGKMMQINLTGFLNGKNAR 99
[Close]
BLAST of EMLSAG00000003884 vs. GO
Match: - (symbol:SRm160 "SRm160" species:7227 "Drosophila melanogaster" [GO:0035145 "exon-exon junction complex" evidence=TAS] [GO:0006397 "mRNA processing" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome" evidence=IC] [GO:0071011 "precatalytic spliceosome" evidence=IDA] InterPro:IPR002483 Pfam:PF01480 PROSITE:PS51025 SMART:SM00311 GO:GO:0035145 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 Gene3D:1.20.1390.10 SUPFAM:SSF101233 eggNOG:NOG242213 OrthoDB:EOG786H40 EMBL:BT015197 ProteinModelPortal:Q6AWQ1 SMR:Q6AWQ1 STRING:7227.FBpp0075617 PaxDb:Q6AWQ1 PRIDE:Q6AWQ1 FlyBase:FBgn0036340 InParanoid:Q6AWQ1 Bgee:Q6AWQ1 Uniprot:Q6AWQ1)

HSP 1 Score: 135.961 bits (341), Expect = 4.660e-36
Identity = 62/95 (65.26%), Postives = 79/95 (83.16%), Query Frame = 0 
Query:    7 FRGXSAXQDNRFSDKEKKLLKQMRFEEILATKIDLTKVKLDVLKPWITKKIAALLGMEDDVVVEFIFNQL-EIKNPDPRKMQINLTGFLNGKNAR 100
            F G +  QD RFSDKEKKL+KQM+F + L  ++D++KVKLDVL+PWI+KKI  +L +EDDVVVEF++NQL E K P P+KMQIN+TGFLNG+NAR
Sbjct:    3 FTGTNQQQDTRFSDKEKKLMKQMKFGDCLNKRVDMSKVKLDVLRPWISKKITDILHIEDDVVVEFVYNQLEEEKYPCPKKMQINMTGFLNGRNAR 97
[Close]
BLAST of EMLSAG00000003884 vs. C. finmarchicus
Match: gi|592890707|gb|GAXK01067668.1| (TSA: Calanus finmarchicus comp17505_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 163.696 bits (413), Expect = 6.273e-47
Identity = 78/100 (78.00%), Postives = 87/100 (87.00%), Query Frame = 0 
Query:    1 MADAGXFRGXSAXQDNRFSDKEKKLLKQMRFEEILATKIDLTKVKLDVLKPWITKKIAALLGMEDDVVVEFIFNQLEIKNPDPRKMQINLTGFLNGKNAR 100
            MADAG FRG SA QDNRFSDKEKKLLK M+FE++L  KID++KVK+DVLKPWITK+   +L +EDDVVVEFIFNQLE K PDPRKMQINLTGFLNGK AR
Sbjct: 1871 MADAGYFRGTSADQDNRFSDKEKKLLKTMKFEDVLGKKIDMSKVKVDVLKPWITKRTTEMLKIEDDVVVEFIFNQLEEKEPDPRKMQINLTGFLNGKYAR 2170
[Close]
BLAST of EMLSAG00000003884 vs. C. finmarchicus
Match: gi|592850497|gb|GAXK01107047.1| (TSA: Calanus finmarchicus comp37125_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 33.4982 bits (75), Expect = 1.106e-1
Identity = 21/79 (26.58%), Postives = 40/79 (50.63%), Query Frame = 0 
Query:    9 GXSAXQDNRFSDKEKKLLKQMRFEEILATKIDLTKVKLDV-----------LKPWITKKIAALLGMEDDVVVEFIFNQL 76
              S  +DN+ +D ++K +K +  E+I   K DL    +D            ++PW+ KKIA  +G  +  + +FI +++
Sbjct: 1786 ATSDKKDNKSADDKRKHIKSL-IEKIPTDKGDLFAYSIDWDLVDNQLMEKRIRPWVHKKIAEYIGEPEPTLTDFICSKV 2019
[Close]
BLAST of EMLSAG00000003884 vs. C. finmarchicus
Match: gi|592850498|gb|GAXK01107046.1| (TSA: Calanus finmarchicus comp37125_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 33.4982 bits (75), Expect = 1.110e-1
Identity = 21/79 (26.58%), Postives = 40/79 (50.63%), Query Frame = 0 
Query:    9 GXSAXQDNRFSDKEKKLLKQMRFEEILATKIDLTKVKLDV-----------LKPWITKKIAALLGMEDDVVVEFIFNQL 76
              S  +DN+ +D ++K +K +  E+I   K DL    +D            ++PW+ KKIA  +G  +  + +FI +++
Sbjct: 1944 ATSDKKDNKSADDKRKHIKSL-IEKIPTDKGDLFAYSIDWDLVDNQLMEKRIRPWVHKKIAEYIGEPEPTLTDFICSKV 2177
[Close]
BLAST of EMLSAG00000003884 vs. C. finmarchicus
Match: gi|592902888|gb|GAXK01055487.1| (TSA: Calanus finmarchicus comp84542_c1_seq2 transcribed RNA sequence)

HSP 1 Score: 31.5722 bits (70), Expect = 5.829e-1
Identity = 24/79 (30.38%), Postives = 38/79 (48.10%), Query Frame = 0 
Query:   24 KLLKQMRFEEILATKIDLTKVKLDVLKPWITKKIAALLGMEDDVVVEFIFNQLEIKNPDPRKMQINLTGFLNGKNARRH 102
            KLLK   FE    T   +  +++ VLK W+ +     +  E  +++ FIF    + NPD   ++I L+ F N    R H
Sbjct:  511 KLLKYRDFELYFYTHHLVA*IQMPVLKDWVRR--T*FIKSESKLMLIFIFL*FNMPNPDYLIVKIILSDF*NYMQIRIH 741
[Close]
BLAST of EMLSAG00000003884 vs. L. salmonis peptides
Match: EMLSAP00000003884 (pep:novel supercontig:LSalAtl2s:LSalAtl2s210:209171:210662:1 gene:EMLSAG00000003884 transcript:EMLSAT00000003884 description:"maker-LSalAtl2s210-snap-gene-2.21")

HSP 1 Score: 239.195 bits (609), Expect = 4.657e-82
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0 
Query:    1 MADAGXFRGXSAXQDNRFSDKEKKLLKQMRFEEILATKIDLTKVKLDVLKPWITKKIAALLGMEDDVVVEFIFNQLEIKNPDPRKMQINLTGFLNGKNARRHSSRDFGPKEGRNQDSASRE 121
            MADAGXFRGXSAXQDNRFSDKEKKLLKQMRFEEILATKIDLTKVKLDVLKPWITKKIAALLGMEDDVVVEFIFNQLEIKNPDPRKMQINLTGFLNGKNARRHSSRDFGPKEGRNQDSASRE
Sbjct:    1 MADAGXFRGXSAXQDNRFSDKEKKLLKQMRFEEILATKIDLTKVKLDVLKPWITKKIAALLGMEDDVVVEFIFNQLEIKNPDPRKMQINLTGFLNGKNARRHSSRDFGPKEGRNQDSASRE 121
[Close]
BLAST of EMLSAG00000003884 vs. SwissProt
Match: gi|347595715|sp|Q52KI8.2|SRRM1_MOUSE (RecName: Full=Serine/arginine repetitive matrix protein 1; AltName: Full=Plenty-of-prolines 101)

HSP 1 Score: 144.05 bits (362), Expect = 7.147e-40
Identity = 70/98 (71.43%), Postives = 85/98 (86.73%), Query Frame = 0 
Query:    3 DAGXFRGXSAXQDNRFSDKEKKLLKQMRFEEILATKIDLTKVKLDVLKPWITKKIAALLGMEDDVVVEFIFNQLEIKNPDPRKMQINLTGFLNGKNAR 100
            DAG FRG SA QDNRFS+K+KKLLKQ++F E L  K+D++KV L+V+KPWITK++  +LG EDDVV+EFIFNQLE+KNPD + MQINLTGFLNGKNAR
Sbjct:    2 DAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAR 99
[Close]
BLAST of EMLSAG00000003884 vs. SwissProt
Match: gi|82083007|sp|Q5ZMJ9.1|SRRM1_CHICK (RecName: Full=Serine/arginine repetitive matrix protein 1)

HSP 1 Score: 144.05 bits (362), Expect = 7.223e-40
Identity = 70/98 (71.43%), Postives = 85/98 (86.73%), Query Frame = 0 
Query:    3 DAGXFRGXSAXQDNRFSDKEKKLLKQMRFEEILATKIDLTKVKLDVLKPWITKKIAALLGMEDDVVVEFIFNQLEIKNPDPRKMQINLTGFLNGKNAR 100
            DAG FRG SA QDNRFS+K+KKLLKQ++F E L  K+D++KV L+V+KPWITK++  +LG EDDVV+EFIFNQLE+KNPD + MQINLTGFLNGKNAR
Sbjct:    2 DAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAR 99
[Close]
BLAST of EMLSAG00000003884 vs. SwissProt
Match: gi|75041142|sp|Q5R5Q2.1|SRRM1_PONAB (RecName: Full=Serine/arginine repetitive matrix protein 1)

HSP 1 Score: 143.665 bits (361), Expect = 9.045e-40
Identity = 70/98 (71.43%), Postives = 85/98 (86.73%), Query Frame = 0 
Query:    3 DAGXFRGXSAXQDNRFSDKEKKLLKQMRFEEILATKIDLTKVKLDVLKPWITKKIAALLGMEDDVVVEFIFNQLEIKNPDPRKMQINLTGFLNGKNAR 100
            DAG FRG SA QDNRFS+K+KKLLKQ++F E L  K+D++KV L+V+KPWITK++  +LG EDDVV+EFIFNQLE+KNPD + MQINLTGFLNGKNAR
Sbjct:    2 DAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAR 99
[Close]
BLAST of EMLSAG00000003884 vs. SwissProt
Match: gi|83305833|sp|Q8IYB3.2|SRRM1_HUMAN (RecName: Full=Serine/arginine repetitive matrix protein 1; AltName: Full=SR-related nuclear matrix protein of 160 kDa; Short=SRm160; AltName: Full=Ser/Arg-related nuclear matrix protein)

HSP 1 Score: 143.665 bits (361), Expect = 1.002e-39
Identity = 70/98 (71.43%), Postives = 85/98 (86.73%), Query Frame = 0 
Query:    3 DAGXFRGXSAXQDNRFSDKEKKLLKQMRFEEILATKIDLTKVKLDVLKPWITKKIAALLGMEDDVVVEFIFNQLEIKNPDPRKMQINLTGFLNGKNAR 100
            DAG FRG SA QDNRFS+K+KKLLKQ++F E L  K+D++KV L+V+KPWITK++  +LG EDDVV+EFIFNQLE+KNPD + MQINLTGFLNGKNAR
Sbjct:    2 DAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAR 99
[Close]
BLAST of EMLSAG00000003884 vs. SwissProt
Match: gi|74625835|sp|Q9USH5.1|YJQ5_SCHPO (RecName: Full=PWI domain-containing protein C825.05c)

HSP 1 Score: 86.6557 bits (213), Expect = 1.909e-20
Identity = 40/104 (38.46%), Postives = 63/104 (60.58%), Query Frame = 0 
Query:    4 AGXFRGXSAXQDNRFSDKEKKLLKQMRFEEILATKIDLTKVKLDVLKPWITKKIAALLGMEDDVVVEFIFNQLE-------------IKNPDPRKMQINLTGFL 94
            +G ++G +A Q+  F+  +KKL++  +F     TK+D+ KV ++VLKPWI  ++  L+G ED+VV+ F++  LE                 DPRK+Q+NLTGFL
Sbjct:    2 SGFYKGVAAEQETLFTTADKKLMRSTKFPASYDTKVDMKKVNIEVLKPWIATRLNELIGFEDEVVINFVYGMLEEAVEASKTSDSQNESTLDPRKVQLNLTGFL 105
[Close]
BLAST of EMLSAG00000003884 vs. Select Arthropod Genomes
Match: XP_016769748.1 (PREDICTED: LOW QUALITY PROTEIN: serine/arginine repetitive matrix protein 1 [Apis mellifera])

HSP 1 Score: 154.836 bits (390), Expect = 5.725e-44
Identity = 69/94 (73.40%), Postives = 81/94 (86.17%), Query Frame = 0 
Query:    7 FRGXSAXQDNRFSDKEKKLLKQMRFEEILATKIDLTKVKLDVLKPWITKKIAALLGMEDDVVVEFIFNQLEIKNPDPRKMQINLTGFLNGKNAR 100
            + G +A QD RFSDKEKKLLKQM+F + L  K+D++KVKLDV+KPWIT KI  +LGMEDDVVVEF++NQLE K PDPRKMQINLTGFLNG+NAR
Sbjct:    3 YTGTTASQDTRFSDKEKKLLKQMKFGDSLTQKVDMSKVKLDVIKPWITTKITQILGMEDDVVVEFVYNQLEEKFPDPRKMQINLTGFLNGRNAR 96
[Close]
BLAST of EMLSAG00000003884 vs. Select Arthropod Genomes
Match: EAL39805.3 (AGAP005366-PA [Anopheles gambiae str. PEST])

HSP 1 Score: 137.117 bits (344), Expect = 9.484e-38
Identity = 62/95 (65.26%), Postives = 80/95 (84.21%), Query Frame = 0 
Query:    7 FRGXSAXQDNRFSDKEKKLLKQMRFEEILATKIDLTKVKLDVLKPWITKKIAALLGMEDDVVVEFIFNQLEIKN-PDPRKMQINLTGFLNGKNAR 100
            F G +  QD+RFSDKEKKLLKQM+F + L  ++D++KVKLDVL+PWI++KI  +L +EDDV+VEF++NQLE +  P P+KMQINLTGFLNGKNAR
Sbjct:    3 FTGTNQQQDSRFSDKEKKLLKQMKFSDNLNKRVDMSKVKLDVLRPWISQKITDMLNIEDDVIVEFVYNQLEEEKFPCPKKMQINLTGFLNGKNAR 97
[Close]
BLAST of EMLSAG00000003884 vs. Select Arthropod Genomes
Match: AAF49848.1 (SRm160 [Drosophila melanogaster])

HSP 1 Score: 135.961 bits (341), Expect = 2.473e-37
Identity = 62/95 (65.26%), Postives = 79/95 (83.16%), Query Frame = 0 
Query:    7 FRGXSAXQDNRFSDKEKKLLKQMRFEEILATKIDLTKVKLDVLKPWITKKIAALLGMEDDVVVEFIFNQL-EIKNPDPRKMQINLTGFLNGKNAR 100
            F G +  QD RFSDKEKKL+KQM+F + L  ++D++KVKLDVL+PWI+KKI  +L +EDDVVVEF++NQL E K P P+KMQIN+TGFLNG+NAR
Sbjct:    3 FTGTNQQQDTRFSDKEKKLMKQMKFGDCLNKRVDMSKVKLDVLRPWISKKITDILHIEDDVVVEFVYNQLEEEKYPCPKKMQINMTGFLNGRNAR 97
[Close]
BLAST of EMLSAG00000003884 vs. Select Arthropod Genomes
Match: gb|EEC15776.1| (serine/arginine regulated nuclear matrix protein, putative, partial [Ixodes scapularis])

HSP 1 Score: 118.627 bits (296), Expect = 1.060e-34
Identity = 64/94 (68.09%), Postives = 79/94 (84.04%), Query Frame = 0 
Query:    8 RGXSAXQDNRFSDKEKKLLKQMRFEEILATKIDLTKVKLDVLKPWITKKIAALLGMEDDVVVEFIFNQLEI-KNPDPRKMQINLTGFLNGKNAR 100
            +G SA QDNRF+DK+KKLLKQ++F ++L  ++D+ KV LD +KPWIT+KI   LGMED+VVVEF+FNQLE  K+PD R MQINLTGFLNGKNAR
Sbjct:    8 QGTSAEQDNRFTDKQKKLLKQLKFHDVLNKRVDMNKVNLDTIKPWITRKITDFLGMEDEVVVEFVFNQLEAEKHPDGRMMQINLTGFLNGKNAR 101
[Close]
BLAST of EMLSAG00000003884 vs. Select Arthropod Genomes
Match: EEB12026.1 (zinc finger protein CCCH domain-containing protein, putative [Pediculus humanus corporis])

HSP 1 Score: 125.946 bits (315), Expect = 6.941e-34
Identity = 68/95 (71.58%), Postives = 81/95 (85.26%), Query Frame = 0 
Query:    7 FRGXSAXQDNRFSDKEKKLLKQMRFEEILATKIDLTKVKLDVLKPWITKKIAALLGMEDDVVVEFIFNQL-EIKNPDPRKMQINLTGFLNGKNAR 100
            + G +A QDNRFSDKEKKLLKQM+F + L  K+D++KVKL+VLKPWI KKI  +LG EDDVVVEF+ NQL E K+PDP+KMQIN+TGFLNGKNAR
Sbjct:    3 YTGTTAEQDNRFSDKEKKLLKQMKFGDSLVEKVDMSKVKLEVLKPWIGKKITEILGWEDDVVVEFVVNQLEEHKHPDPKKMQINMTGFLNGKNAR 97
[Close]
BLAST of EMLSAG00000003884 vs. Select Arthropod Genomes
Match: gb|KPM08854.1| (PWI domain containing protein [Sarcoptes scabiei])

HSP 1 Score: 119.783 bits (299), Expect = 8.380e-32
Identity = 65/101 (64.36%), Postives = 78/101 (77.23%), Query Frame = 0 
Query:    1 MADAGXFRGXSAXQDNRFSDKEKKLLKQMRFEEILATKIDLTKVKLDVLKPWITKKIAALLGMEDDVVVEFIFNQLEIKN-PDPRKMQINLTGFLNGKNAR 100
            M DAG FRG SA QDNRFSDK KKLLKQ++F EIL+ K+DL KV LD +KPWI K+I   LG++D+VV E++ NQLE    PD R MQIN+TGFL+GK AR
Sbjct:    1 MTDAGFFRGTSAAQDNRFSDKSKKLLKQLKFSEILSNKVDLKKVNLDFVKPWIQKQICLSLGIDDEVVYEYVINQLEQSRFPDGRTMQINITGFLDGKRAR 101
[Close]
BLAST of EMLSAG00000003884 vs. Select Arthropod Genomes
Match: gb|EFA03245.1| (hypothetical protein TcasGA2_TC013178 [Tribolium castaneum])

HSP 1 Score: 119.398 bits (298), Expect = 1.367e-31
Identity = 58/94 (61.70%), Postives = 80/94 (85.11%), Query Frame = 0 
Query:    7 FRGXSAXQDNRFSDKEKKLLKQMRFEEILATKIDLTKVKLDVLKPWITKKIAALLGMEDDVVVEFIFNQLEIKNPDPRKMQINLTGFLNGKNAR 100
            + G +  QDNRFSDKEKKLLKQM+F + L+ ++D++K+KLDV+KPWI  K+  +L ++DDVVV+F++NQL+ K PDP+K+QINLTGFL+GKNAR
Sbjct:    3 YTGTTTEQDNRFSDKEKKLLKQMKFSDCLSQRVDMSKIKLDVIKPWIQDKLTEILKIDDDVVVDFVYNQLDEKFPDPKKIQINLTGFLHGKNAR 96
[Close]
BLAST of EMLSAG00000003884 vs. Select Arthropod Genomes
Match: EFX85677.1 (hypothetical protein DAPPUDRAFT_313769 [Daphnia pulex])

HSP 1 Score: 106.686 bits (265), Expect = 1.266e-30
Identity = 50/78 (64.10%), Postives = 63/78 (80.77%), Query Frame = 0 
Query:    1 MADAGXFRGXSAXQDNRFSDKEKKLLKQMRFEEILATKIDLTKVKLDVLKPWITKKIAALL-GMEDDVVVEFIFNQLE 77
            M DAG FRG S  QDNRFSDKEKKLLK ++F E +  K+D++KVKL+ +KPWIT KI  L+ G+EDDV+VE++FNQLE
Sbjct:    1 MTDAGFFRGTSTEQDNRFSDKEKKLLKTIKFAENVTKKVDMSKVKLETIKPWITTKITELMGGIEDDVLVEYVFNQLE 78
[Close]
BLAST of EMLSAG00000003884 vs. Select Arthropod Genomes
Match: gb|KFM75376.1| (Serine/arginine repetitive matrix protein 1, partial [Stegodyphus mimosarum])

HSP 1 Score: 93.9745 bits (232), Expect = 1.031e-22
Identity = 44/62 (70.97%), Postives = 51/62 (82.26%), Query Frame = 0 
Query:   41 LTKVKLDVLKPWITKKIAALLG-MEDDVVVEFIFNQLEI-KNPDPRKMQINLTGFLNGKNAR 100
            + K+ LDV+KPWI K+I  +LG +EDDVVVEF+FNQLE  K PD R MQINLTGFLNGKNAR
Sbjct:    1 MNKINLDVVKPWIAKRITDMLGGIEDDVVVEFVFNQLEAEKYPDARMMQINLTGFLNGKNAR 62
[Close]
BLAST of EMLSAG00000003884 vs. nr
Match: gi|746859956|ref|XP_011060800.1| (PREDICTED: serine/arginine repetitive matrix protein 1 [Acromyrmex echinatior])

HSP 1 Score: 149.058 bits (375), Expect = 7.045e-44
Identity = 69/94 (73.40%), Postives = 81/94 (86.17%), Query Frame = 0 
Query:    7 FRGXSAXQDNRFSDKEKKLLKQMRFEEILATKIDLTKVKLDVLKPWITKKIAALLGMEDDVVVEFIFNQLEIKNPDPRKMQINLTGFLNGKNAR 100
            + G +A QD RFSDKEKKLLKQM+F + L  K+D++KVKLDV+KPWIT KI  +LGMEDDVVVEF++NQLE K PDPRKMQINLTGFLNG+NAR
Sbjct:    2 YTGTTASQDTRFSDKEKKLLKQMKFGDSLTQKVDMSKVKLDVIKPWITTKITQILGMEDDVVVEFVYNQLEEKFPDPRKMQINLTGFLNGRNAR 95
[Close]
BLAST of EMLSAG00000003884 vs. nr
Match: gi|1058111963|gb|JAS59630.1| (hypothetical protein g.33728, partial [Cuerna arida])

HSP 1 Score: 147.902 bits (372), Expect = 1.135e-43
Identity = 70/98 (71.43%), Postives = 82/98 (83.67%), Query Frame = 0 
Query:    7 FRGXSAXQDNRFSDKEKKLLKQMRFEEILATKIDLTKVKLDVLKPWITKKIAALLGMEDDVVVEFIFNQLEIKNPDPRKMQINLTGFLNGKNARRHSS 104
            + G +A QDNRFSDKEKKLLKQM+F+  L   +D+TKVKLDV+KPWI +KI A+LG+EDDVVV F+FNQLE K PDP+KMQINLTGFLNGKNAR   S
Sbjct:    3 YTGTTAEQDNRFSDKEKKLLKQMKFDNNLQKPVDMTKVKLDVIKPWIAQKITAVLGIEDDVVVHFVFNQLEAKFPDPKKMQINLTGFLNGKNARIFMS 100
[Close]
BLAST of EMLSAG00000003884 vs. nr
Match: gi|585665134|ref|XP_006812135.1| (PREDICTED: serine/arginine repetitive matrix protein 1-like isoform X3 [Saccoglossus kowalevskii])

HSP 1 Score: 158.688 bits (400), Expect = 8.337e-43
Identity = 70/100 (70.00%), Postives = 83/100 (83.00%), Query Frame = 0 
Query:    1 MADAGXFRGXSAXQDNRFSDKEKKLLKQMRFEEILATKIDLTKVKLDVLKPWITKKIAALLGMEDDVVVEFIFNQLEIKNPDPRKMQINLTGFLNGKNAR 100
            MADAG FRG SA QDNRF +K+KKLLKQMRF E+L  K+ ++KV LD +KPWIT+KI  +L  EDDV+ EFIFNQLE++NPD + MQINLTGFLNGKNAR
Sbjct:    1 MADAGFFRGTSAEQDNRFCNKQKKLLKQMRFAEVLEKKVSMSKVNLDTIKPWITQKITDILSFEDDVITEFIFNQLEVENPDAKTMQINLTGFLNGKNAR 100
[Close]
BLAST of EMLSAG00000003884 vs. nr
Match: gi|585665130|ref|XP_006812134.1| (PREDICTED: serine/arginine repetitive matrix protein 1-like isoform X2 [Saccoglossus kowalevskii])

HSP 1 Score: 158.688 bits (400), Expect = 9.859e-43
Identity = 70/100 (70.00%), Postives = 83/100 (83.00%), Query Frame = 0 
Query:    1 MADAGXFRGXSAXQDNRFSDKEKKLLKQMRFEEILATKIDLTKVKLDVLKPWITKKIAALLGMEDDVVVEFIFNQLEIKNPDPRKMQINLTGFLNGKNAR 100
            MADAG FRG SA QDNRF +K+KKLLKQMRF E+L  K+ ++KV LD +KPWIT+KI  +L  EDDV+ EFIFNQLE++NPD + MQINLTGFLNGKNAR
Sbjct:    1 MADAGFFRGTSAEQDNRFCNKQKKLLKQMRFAEVLEKKVSMSKVNLDTIKPWITQKITDILSFEDDVITEFIFNQLEVENPDAKTMQINLTGFLNGKNAR 100
[Close]
BLAST of EMLSAG00000003884 vs. nr
Match: gi|585665126|ref|XP_006812133.1| (PREDICTED: serine/arginine repetitive matrix protein 1-like isoform X1 [Saccoglossus kowalevskii])

HSP 1 Score: 158.303 bits (399), Expect = 1.155e-42
Identity = 70/100 (70.00%), Postives = 83/100 (83.00%), Query Frame = 0 
Query:    1 MADAGXFRGXSAXQDNRFSDKEKKLLKQMRFEEILATKIDLTKVKLDVLKPWITKKIAALLGMEDDVVVEFIFNQLEIKNPDPRKMQINLTGFLNGKNAR 100
            MADAG FRG SA QDNRF +K+KKLLKQMRF E+L  K+ ++KV LD +KPWIT+KI  +L  EDDV+ EFIFNQLE++NPD + MQINLTGFLNGKNAR
Sbjct:    1 MADAGFFRGTSAEQDNRFCNKQKKLLKQMRFAEVLEKKVSMSKVNLDTIKPWITQKITDILSFEDDVITEFIFNQLEVENPDAKTMQINLTGFLNGKNAR 100
[Close]
BLAST of EMLSAG00000003884 vs. nr
Match: gi|926624435|ref|XP_013777676.1| (PREDICTED: LOW QUALITY PROTEIN: serine/arginine repetitive matrix protein 1-like [Limulus polyphemus])

HSP 1 Score: 151.754 bits (382), Expect = 2.898e-42
Identity = 70/101 (69.31%), Postives = 86/101 (85.15%), Query Frame = 0 
Query:    1 MADAGXFRGXSAXQDNRFSDKEKKLLKQMRFEEILATKIDLTKVKLDVLKPWITKKIAALLGMEDDVVVEFIFNQLE-IKNPDPRKMQINLTGFLNGKNAR 100
            M DAG FRG SA QDNRFS+K+KKLL+Q++F EIL  K+D+ KV LD++KPWITKKI +LLG+EDDV+++FIFNQL+  K PD + MQINLTGFLNGKNAR
Sbjct:    1 MTDAGFFRGTSAEQDNRFSNKQKKLLRQLKFHEILEKKVDMGKVNLDIIKPWITKKITSLLGIEDDVIIDFIFNQLDGEKYPDAKTMQINLTGFLNGKNAR 101
[Close]
BLAST of EMLSAG00000003884 vs. nr
Match: gi|1058082510|gb|JAS44916.1| (hypothetical protein g.10220, partial [Cuerna arida])

HSP 1 Score: 148.673 bits (374), Expect = 3.586e-42
Identity = 64/94 (68.09%), Postives = 83/94 (88.30%), Query Frame = 0 
Query:    7 FRGXSAXQDNRFSDKEKKLLKQMRFEEILATKIDLTKVKLDVLKPWITKKIAALLGMEDDVVVEFIFNQLEIKNPDPRKMQINLTGFLNGKNAR 100
            + G +A QDNRFSDKEKKLLKQM+F E+L  ++D++KVK+DV+KPWI +KIA++L +EDDVV+++I NQLE++ PDPRKMQINLTGFLNG NAR
Sbjct:    3 YTGTTAEQDNRFSDKEKKLLKQMKFGELLNQRVDMSKVKVDVIKPWIQEKIASILAVEDDVVIDYILNQLEVQYPDPRKMQINLTGFLNGNNAR 96
[Close]
BLAST of EMLSAG00000003884 vs. nr
Match: gi|556954197|ref|XP_005988814.1| (PREDICTED: serine/arginine repetitive matrix protein 1 isoform X2 [Latimeria chalumnae])

HSP 1 Score: 157.147 bits (396), Expect = 3.726e-42
Identity = 69/98 (70.41%), Postives = 84/98 (85.71%), Query Frame = 0 
Query:    3 DAGXFRGXSAXQDNRFSDKEKKLLKQMRFEEILATKIDLTKVKLDVLKPWITKKIAALLGMEDDVVVEFIFNQLEIKNPDPRKMQINLTGFLNGKNAR 100
            DAG FRG SA QDNRFS+K+KKLL+Q++F E L  K+D++KV L+V+KPWITK++  +LG EDDV+VEFIFNQLE KNPD + MQINLTGFLNGKNAR
Sbjct:    2 DAGFFRGTSAEQDNRFSNKQKKLLRQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDDVIVEFIFNQLEEKNPDAKMMQINLTGFLNGKNAR 99
[Close]
BLAST of EMLSAG00000003884 vs. nr
Match: gi|817055044|ref|XP_012268320.1| (PREDICTED: serine/arginine repetitive matrix protein 1 isoform X1 [Athalia rosae] >gi|817055046|ref|XP_012268321.1| PREDICTED: serine/arginine repetitive matrix protein 1 isoform X1 [Athalia rosae])

HSP 1 Score: 157.147 bits (396), Expect = 3.989e-42
Identity = 70/94 (74.47%), Postives = 81/94 (86.17%), Query Frame = 0 
Query:    7 FRGXSAXQDNRFSDKEKKLLKQMRFEEILATKIDLTKVKLDVLKPWITKKIAALLGMEDDVVVEFIFNQLEIKNPDPRKMQINLTGFLNGKNAR 100
            + G +A QD RFSDKEKK+LKQMRF E L  K+D++KVKLDV+KPWIT KI  +LGMEDDVVVEF++NQLE K PDPRKMQINLTGFLNG+NAR
Sbjct:    3 YTGTTASQDTRFSDKEKKMLKQMRFGESLTQKVDMSKVKLDVIKPWITTKITQILGMEDDVVVEFVYNQLEEKFPDPRKMQINLTGFLNGRNAR 96
[Close]
BLAST of EMLSAG00000003884 vs. nr
Match: gi|755990222|ref|XP_011312449.1| (PREDICTED: serine/arginine repetitive matrix protein 1-like isoform X3 [Fopius arisanus])

HSP 1 Score: 156.762 bits (395), Expect = 4.783e-42
Identity = 69/94 (73.40%), Postives = 82/94 (87.23%), Query Frame = 0 
Query:    7 FRGXSAXQDNRFSDKEKKLLKQMRFEEILATKIDLTKVKLDVLKPWITKKIAALLGMEDDVVVEFIFNQLEIKNPDPRKMQINLTGFLNGKNAR 100
            + G +A QD RFSDKEKKLLKQM+F + L  K+D++KVKLDV+KPWIT KI  +LG+EDDVVVEF++NQLE K+PDPRKMQINLTGFLNGKNAR
Sbjct:    3 YTGTTASQDTRFSDKEKKLLKQMKFGDSLTQKVDMSKVKLDVIKPWITTKITQILGIEDDVVVEFVYNQLEEKHPDPRKMQINLTGFLNGKNAR 96
[Close]
BLAST of EMLSAG00000003884 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold620_size123222-snap-gene-0.14 (protein:Tk05597 transcript:maker-scaffold620_size123222-snap-gene-0.14-mRNA-1 annotation:"serine arginine repetitive matrix protein 1-like isoform x3")

HSP 1 Score: 172.17 bits (435), Expect = 1.725e-51
Identity = 80/101 (79.21%), Postives = 92/101 (91.09%), Query Frame = 0 
Query:    1 MADAGXFRGXSAXQDNRFSDKEKKLLKQMRFEEI-LATKIDLTKVKLDVLKPWITKKIAALLGMEDDVVVEFIFNQLEIKNPDPRKMQINLTGFLNGKNAR 100
            M DAG FRG SA QDNRF+DKEKKLLKQM+FE++ L TK++LTK+KLDVLKPWIT+++A LLGMEDDVVVEFIFNQLE ++ DPRKMQINLTGFLNGKNAR
Sbjct:   20 MTDAGYFRGTSADQDNRFADKEKKLLKQMKFEDVVLNTKVNLTKIKLDVLKPWITERVADLLGMEDDVVVEFIFNQLEAQDVDPRKMQINLTGFLNGKNAR 120
The following BLAST results are available for this feature:
BLAST of EMLSAG00000003884 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 25
Match NameE-valueIdentityDescription
-5.730e-3971.43symbol:SRRM1 "Serine/arginine repetitive matrix pr... [more]
-5.921e-3971.43symbol:Srrm1 "serine/arginine repetitive matrix 1"... [more]
-6.078e-3971.43symbol:SRRM1 "Serine/arginine repetitive matrix pr... [more]
-6.606e-3971.43symbol:SRRM1 "Uncharacterized protein" species:991... [more]
-6.804e-3971.43symbol:Srrm1 "serine/arginine repetitive matrix 1"... [more]
-8.758e-3971.43symbol:SRRM1 "Serine/arginine repetitive matrix pr... [more]
-9.384e-3971.43symbol:SRRM1 "Serine/arginine repetitive matrix pr... [more]
-1.007e-3871.43symbol:SRRM1 "Serine/arginine repetitive matrix pr... [more]
-1.127e-3770.41symbol:srrm1 "serine/arginine repetitive matrix 1"... [more]
-4.660e-3665.26symbol:SRm160 "SRm160" species:7227 "Drosophila me... [more]

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BLAST of EMLSAG00000003884 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 4
Match NameE-valueIdentityDescription
gi|592890707|gb|GAXK01067668.1|6.273e-4778.00TSA: Calanus finmarchicus comp17505_c1_seq1 transc... [more]
gi|592850497|gb|GAXK01107047.1|1.106e-126.58TSA: Calanus finmarchicus comp37125_c0_seq2 transc... [more]
gi|592850498|gb|GAXK01107046.1|1.110e-126.58TSA: Calanus finmarchicus comp37125_c0_seq1 transc... [more]
gi|592902888|gb|GAXK01055487.1|5.829e-130.38TSA: Calanus finmarchicus comp84542_c1_seq2 transc... [more]
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BLAST of EMLSAG00000003884 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000038844.657e-82100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s210:20917... [more]
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BLAST of EMLSAG00000003884 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
gi|347595715|sp|Q52KI8.2|SRRM1_MOUSE7.147e-4071.43RecName: Full=Serine/arginine repetitive matrix pr... [more]
gi|82083007|sp|Q5ZMJ9.1|SRRM1_CHICK7.223e-4071.43RecName: Full=Serine/arginine repetitive matrix pr... [more]
gi|75041142|sp|Q5R5Q2.1|SRRM1_PONAB9.045e-4071.43RecName: Full=Serine/arginine repetitive matrix pr... [more]
gi|83305833|sp|Q8IYB3.2|SRRM1_HUMAN1.002e-3971.43RecName: Full=Serine/arginine repetitive matrix pr... [more]
gi|74625835|sp|Q9USH5.1|YJQ5_SCHPO1.909e-2038.46RecName: Full=PWI domain-containing protein C825.0... [more]
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BLAST of EMLSAG00000003884 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 9
Match NameE-valueIdentityDescription
XP_016769748.15.725e-4473.40PREDICTED: LOW QUALITY PROTEIN: serine/arginine re... [more]
EAL39805.39.484e-3865.26AGAP005366-PA [Anopheles gambiae str. PEST][more]
AAF49848.12.473e-3765.26SRm160 [Drosophila melanogaster][more]
gb|EEC15776.1|1.060e-3468.09serine/arginine regulated nuclear matrix protein, ... [more]
EEB12026.16.941e-3471.58zinc finger protein CCCH domain-containing protein... [more]
gb|KPM08854.1|8.380e-3264.36PWI domain containing protein [Sarcoptes scabiei][more]
gb|EFA03245.1|1.367e-3161.70hypothetical protein TcasGA2_TC013178 [Tribolium c... [more]
EFX85677.11.266e-3064.10hypothetical protein DAPPUDRAFT_313769 [Daphnia pu... [more]
gb|KFM75376.1|1.031e-2270.97Serine/arginine repetitive matrix protein 1, parti... [more]
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BLAST of EMLSAG00000003884 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25
Match NameE-valueIdentityDescription
gi|746859956|ref|XP_011060800.1|7.045e-4473.40PREDICTED: serine/arginine repetitive matrix prote... [more]
gi|1058111963|gb|JAS59630.1|1.135e-4371.43hypothetical protein g.33728, partial [Cuerna arid... [more]
gi|585665134|ref|XP_006812135.1|8.337e-4370.00PREDICTED: serine/arginine repetitive matrix prote... [more]
gi|585665130|ref|XP_006812134.1|9.859e-4370.00PREDICTED: serine/arginine repetitive matrix prote... [more]
gi|585665126|ref|XP_006812133.1|1.155e-4270.00PREDICTED: serine/arginine repetitive matrix prote... [more]
gi|926624435|ref|XP_013777676.1|2.898e-4269.31PREDICTED: LOW QUALITY PROTEIN: serine/arginine re... [more]
gi|1058082510|gb|JAS44916.1|3.586e-4268.09hypothetical protein g.10220, partial [Cuerna arid... [more]
gi|556954197|ref|XP_005988814.1|3.726e-4270.41PREDICTED: serine/arginine repetitive matrix prote... [more]
gi|817055044|ref|XP_012268320.1|3.989e-4274.47PREDICTED: serine/arginine repetitive matrix prote... [more]
gi|755990222|ref|XP_011312449.1|4.783e-4273.40PREDICTED: serine/arginine repetitive matrix prote... [more]

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BLAST of EMLSAG00000003884 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 1
Match NameE-valueIdentityDescription
maker-scaffold620_size123222-snap-gene-0.141.725e-5179.21protein:Tk05597 transcript:maker-scaffold620_size1... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s210supercontigLSalAtl2s210:209171..210662 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s210-snap-gene-2.21
Biotypeprotein_coding
EvidenceIEA
NoteSerine/arginine repetitive matrix protein 1
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000003884 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000003884EMLSAT00000003884-699731Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s210:209171..210662+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000003884-686650 ID=EMLSAG00000003884-686650|Name=EMLSAG00000003884|organism=Lepeophtheirus salmonis|type=gene|length=1492bp|location=Sequence derived from alignment at LSalAtl2s210:209171..210662+ (Lepeophtheirus salmonis)
GCTGCATCTAAAAATAGATTAAAAACATTCACAAGTTAACTCTTTGATAG
AATGAATTAGATACAAAAAGTATTACTAAGAAGTAGTCGCTATGTAGTAG
TTTTTTTATATTTATTTTGAAAAATACCCTACTAAGCCTATCAAGGCGTT
AATATAATAACTAATAAGTCCCGAAATGACATAAAAATAGTGTTTTGTTG
TCAGTTGTCTATTAATCTGCTTCTTTTCCTCAATTAAGTGTTCTGAGTGT
TTAAATGGCCTGAATTTGAATTAGTTATATTTTATAAGCTTTAAAAAATT
ATGAACTATTATTGAATAATAATTCTACAATTAAAAATTGGGCTAATGAC
GACCAACTGATTTGGTACCTTTCATCCCTTGTTTGTTATTAATATAAGGC
TTGCGAGATACATACAATAAAAGTATCAACGTGAAAAAATATTTAAAGTA
AATAATATATGTGTCTAAATTTTTAATATTTGATCTTTCCTTTTGAAATG
ACCTTCTTTTACTTCATTTTTGTTACAATCATATTGATTCCATTGATCCA
CAGTAATACAAGAAGAAACCCTGTTTTTAAACTATTAAAGCATGTGCTTG
CGTAAATATAATTTCAAACGGTTATTTGGTAGCTTATGTGCTAGCTGGTG
GCAATCCACGATCCTGAAGCGTAGAGTTAAAAAGTTCGGTCCAGATCAAC
GCCCGTTGCTACACTACTTGTTCCGACGCCGCATAATAAAATAAGGGTAG
CAGCTGCGCAAGCGCAATGAACTGAAATCTGATTAACGTAGTAGTAGTGA
CTGAAATCAGATCATCAGAGTAGTTGGATATTAGTTATTTCTTTATAGGA
GAAATGGTAGAGTAAGGAAAAGGGATCCCCAAATCAATTAGTCTAGAATT
CCAATTGTACTTTGTTGTTGTAAGTAAGTCGCACATTGAGGATGGCGGAT
GCAGGGMTCTTCCGAGGGYCAAGCGCGGYCCAAGACAATCGTTTTTCGGA
CAAAGAGAAGAAGCTTCTTAAGCAAATGCGGTTTGAGGAGATTCTAGCAA
CGAAAATCGATTTGACTAAAGTGAAACTGGATGTTCTGAAGCCCTGGATC
ACCAAGAAGATTGCGGCACTCTTGGGGATGGAGGATGACGTGGTTGTGGA
GTTTATTTTTAATCAGTTGGAGATTAAGGTGAGTGGCAGGATTCTCTCGA
CTTGTGGTTCCATTCCTCTCTTTACCTTCTTTTTAGAACCCGGATCCTCG
AAAAATGCAAATCAATCTGACGGGGTTCCTCAATGGAAAGAATGCACGTG
TTTTCATGGGCGAACTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTC
CTCGACTCAGCTCAAAAAAATGATAGCGGCATTCCTCAAGAGATTTTGGA
CCAAAAGAAGGAAGAAATCAAGATTCGGCAAGCAGAGAGTGA
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