EMLSAG00000004295, EMLSAG00000004295-687061 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000004295 vs. L. salmonis peptides
Match: EMLSAP00000004295 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2258:48464:49380:-1 gene:EMLSAG00000004295 transcript:EMLSAT00000004295 description:"maker-LSalAtl2s2258-augustus-gene-0.1") HSP 1 Score: 253.447 bits (646), Expect = 2.314e-87 Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0 Query: 1 MHNRMDVSQNPGGVSKKESLTEESFSHKPNCSSNSISSPATTGTCVVSLSVSSGSSSXPIMATXTATTTSTKSSTSSTNSSXTTGXTTHAEKKRGPGRPSGSTRQNIDNQRNPGAGNNQSSKGNNHHIKDGSGPP 135 MHNRMDVSQNPGGVSKKESLTEESFSHKPNCSSNSISSPATTGTCVVSLSVSSGSSSXPIMATXTATTTSTKSSTSSTNSSXTTGXTTHAEKKRGPGRPSGSTRQNIDNQRNPGAGNNQSSKGNNHHIKDGSGPP Sbjct: 1 MHNRMDVSQNPGGVSKKESLTEESFSHKPNCSSNSISSPATTGTCVVSLSVSSGSSSXPIMATXTATTTSTKSSTSSTNSSXTTGXTTHAEKKRGPGRPSGSTRQNIDNQRNPGAGNNQSSKGNNHHIKDGSGPP 135
BLAST of EMLSAG00000004295 vs. L. salmonis peptides
Match: EMLSAP00000003750 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2015:18932:23770:1 gene:EMLSAG00000003750 transcript:EMLSAT00000003750 description:"maker-LSalAtl2s2015-snap-gene-0.5") HSP 1 Score: 150.984 bits (380), Expect = 1.632e-43 Identity = 119/130 (91.54%), Postives = 122/130 (93.85%), Query Frame = 0 Query: 6 DVSQNPGGVSKKESLTEESFSHKPNCSSNSISSPATTGTCVVSLSVSSGSSSXPIMATXTATTTSTKSSTSSTNSSXTTGXTTHAEKKRGPGRPSGSTRQNIDNQRNPGAGNNQSSKGNNHHIKDGSGPP 135 D +QNPGGV KKESLTEESFSHK N SSNSISSPATTGTCVVSLSVSSGSSS PIM T TATTTSTKS+TSSTNSS TTGXTTHAEKKRGPGRPSGSTRQNIDNQRNPG+GNNQSSKGNNHHIKDGSGPP Sbjct: 516 DKAQNPGGVPKKESLTEESFSHKHNSSSNSISSPATTGTCVVSLSVSSGSSSTPIMTTTTATTTSTKSNTSSTNSSVTTGXTTHAEKKRGPGRPSGSTRQNIDNQRNPGSGNNQSSKGNNHHIKDGSGPP 645
BLAST of EMLSAG00000004295 vs. L. salmonis peptides
Match: EMLSAP00000005267 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2819:7389:12032:-1 gene:EMLSAG00000005267 transcript:EMLSAT00000005267 description:"maker-LSalAtl2s2819-snap-gene-0.4") HSP 1 Score: 150.214 bits (378), Expect = 1.874e-43 Identity = 119/130 (91.54%), Postives = 121/130 (93.08%), Query Frame = 0 Query: 6 DVSQNPGGVSKKESLTEESFSHKPNCSSNSISSPATTGTCVVSLSVSSGSSSXPIMATXTATTTSTKSSTSSTNSSXTTGXTTHAEKKRGPGRPSGSTRQNIDNQRNPGAGNNQSSKGNNHHIKDGSGPP 135 D +QNPGGV KKESLTEESFSHK N SSNSISSPATTGTCVVSLSVSSGSSSXP MA XTATTTSTKSST STNSS TTG TTHAEKKRGPGRPSGSTRQNIDNQRNPG+GNNQSSKGNNHHIKDGSGPP Sbjct: 408 DKAQNPGGVPKKESLTEESFSHKHNSSSNSISSPATTGTCVVSLSVSSGSSSXPXMAXXTATTTSTKSSTPSTNSSVTTGTTTHAEKKRGPGRPSGSTRQNIDNQRNPGSGNNQSSKGNNHHIKDGSGPP 537
BLAST of EMLSAG00000004295 vs. L. salmonis peptides
Match: EMLSAP00000001495 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1256:67687:72293:-1 gene:EMLSAG00000001495 transcript:EMLSAT00000001495 description:"maker-LSalAtl2s1256-augustus-gene-0.21") HSP 1 Score: 144.821 bits (364), Expect = 9.002e-41 Identity = 119/130 (91.54%), Postives = 121/130 (93.08%), Query Frame = 0 Query: 6 DVSQNPGGVSKKESLTEESFSHKPNCSSNSISSPATTGTCVVSLSVSSGSSSXPIMATXTATTTSTKSSTSSTNSSXTTGXTTHAEKKRGPGRPSGSTRQNIDNQRNPGAGNNQSSKGNNHHIKDGSGPP 135 D +QNPGGV KKESLTEESFSHK N SSNSISSPATTGTCVVSLSVSSGSSSXPIM TATTTSTKSSTSSTNSS TTG TTHAEKKRGPGRPSGSTRQNIDNQRNPG+GNNQSSKGNNHHIKDGSGPP Sbjct: 624 DKAQNPGGVPKKESLTEESFSHKHNSSSNSISSPATTGTCVVSLSVSSGSSSXPIMTXTTATTTSTKSSTSSTNSSVTTGTTTHAEKKRGPGRPSGSTRQNIDNQRNPGSGNNQSSKGNNHHIKDGSGPP 753
BLAST of EMLSAG00000004295 vs. L. salmonis peptides
Match: EMLSAP00000003450 (pep:novel supercontig:LSalAtl2s:LSalAtl2s188:819370:821796:-1 gene:EMLSAG00000003450 transcript:EMLSAT00000003450 description:"maker-LSalAtl2s188-snap-gene-7.31") HSP 1 Score: 131.339 bits (329), Expect = 3.467e-38 Identity = 104/130 (80.00%), Postives = 113/130 (86.92%), Query Frame = 0 Query: 6 DVSQNPGGVSKKESLTEESFSHKPNCSSNSISSPATTGTCVVSLSVSSGSSSXPIMATXTATTTSTKSSTSSTNSSXTTGXTTHAEKKRGPGRPSGSTRQNIDNQRNPGAGNNQSSKGNNHHIKDGSGPP 135 D +QNPGGV KKE TEESFSHK N SSNSISSPATTGTCVVSLSVSSGSSS PIM T TATT++ S++S+ +S T TTHAEKKRGPGRPSGSTRQNIDNQRNPG+GNNQSSKGN+HHIKDGSGPP Sbjct: 22 DKAQNPGGVPKKEFSTEESFSHKHNSSSNSISSPATTGTCVVSLSVSSGSSSTPIMXTTTATTSTKSSTSSTNSSVTTG-TTTHAEKKRGPGRPSGSTRQNIDNQRNPGSGNNQSSKGNSHHIKDGSGPP 150
BLAST of EMLSAG00000004295 vs. L. salmonis peptides
Match: EMLSAP00000003449 (pep:novel supercontig:LSalAtl2s:LSalAtl2s188:708922:714137:-1 gene:EMLSAG00000003449 transcript:EMLSAT00000003449 description:"snap_masked-LSalAtl2s188-processed-gene-7.17") HSP 1 Score: 84.3445 bits (207), Expect = 1.132e-20 Identity = 77/119 (64.71%), Postives = 83/119 (69.75%), Query Frame = 0 Query: 15 SKKESLTEESFSHKPNCSSNSISSPATTGTCVVSLSVSSGSSSXPIMATXTATTTSTKSSTSSTNSSXTTGXTTHAEKKRGPGRPSGSTRQNIDNQRNPGAGNNQSSKGNNHHIKDGSG 133 S KES E+SF H N SSNS +SPATTG VVSLS SSG S P +TS+KSSTSSTNSS TTG T H EKKRGP RPSGSTRQNIDNQR PG+GN +SS KDGSG Sbjct: 20 STKESSMEDSFLHHRNSSSNSSNSPATTGAGVVSLSTSSGRSITP----TMTISTSSKSSTSSTNSSATTGSTMHVEKKRGPIRPSGSTRQNIDNQRIPGSGNIKSS-------KDGSG 127
BLAST of EMLSAG00000004295 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold959_size76551-snap-gene-0.22 (protein:Tk01218 transcript:maker-scaffold959_size76551-snap-gene-0.22-mRNA-1 annotation:"polyhomeotic-like protein 1") HSP 1 Score: 45.4394 bits (106), Expect = 5.827e-7 Identity = 30/71 (42.25%), Postives = 40/71 (56.34%), Query Frame = 0 Query: 65 TATTTSTKSSTSSTNSSXTTGXTTHAEKKRGPGRPSGSTRQNIDNQRNPGAGNNQSSKGNNHHIKDGSGPP 135 T T TS+ + +S+++ + T EKKRGPGRP GSTRQ+I+ QR + K NH G GPP Sbjct: 62 TPTITSSHNGLTSSHNGKKSDGTPATEKKRGPGRPPGSTRQSIEQQR------LNADKAKNH----GDGPP 122
BLAST of EMLSAG00000004295 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold1856_size26313-snap-gene-0.1 (protein:Tk01980 transcript:maker-scaffold1856_size26313-snap-gene-0.1-mRNA-1 annotation:"polyhomeotic-like protein 1") HSP 1 Score: 46.2098 bits (108), Expect = 5.874e-7 Identity = 30/71 (42.25%), Postives = 40/71 (56.34%), Query Frame = 0 Query: 65 TATTTSTKSSTSSTNSSXTTGXTTHAEKKRGPGRPSGSTRQNIDNQRNPGAGNNQSSKGNNHHIKDGSGPP 135 T T TS+ + +S+++ + T EKKRGPGRP GSTRQ+I+ QR + K NH G GPP Sbjct: 62 TPTITSSHNGLTSSHNGKKSDGTPATEKKRGPGRPPGSTRQSIEQQR------LNADKAKNH----GDGPP 122 The following BLAST results are available for this feature:
BLAST of EMLSAG00000004295 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000004295 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 0
BLAST of EMLSAG00000004295 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 6
BLAST of EMLSAG00000004295 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000004295 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000004295 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000004295 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 2
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s2258:48464..49380- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000004295-687061 ID=EMLSAG00000004295-687061|Name=EMLSAG00000004295|organism=Lepeophtheirus salmonis|type=gene|length=917bp|location=Sequence derived from alignment at LSalAtl2s2258:48464..49380- (Lepeophtheirus salmonis)back to top Add to Basket
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