EMLSAG00000004750, EMLSAG00000004750-687516 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000004750 vs. C. finmarchicus
Match: gi|592793712|gb|GAXK01160856.1| (TSA: Calanus finmarchicus comp4042017_c0_seq1 transcribed RNA sequence) HSP 1 Score: 40.817 bits (94), Expect = 9.215e-5 Identity = 17/29 (58.62%), Postives = 21/29 (72.41%), Query Frame = 0 Query: 97 AQEWLKDNMNFWPKDYWPPQSPDLNPLDF 125 A W + +FW +DYWP +SPDLNPLDF Sbjct: 175 AAVWGQGGWSFWCQDYWPARSPDLNPLDF 261
BLAST of EMLSAG00000004750 vs. C. finmarchicus
Match: gi|592929986|gb|GAXK01028559.1| (TSA: Calanus finmarchicus comp8324934_c0_seq1 transcribed RNA sequence) HSP 1 Score: 35.4242 bits (80), Expect = 1.150e-2 Identity = 26/80 (32.50%), Postives = 37/80 (46.25%), Query Frame = 0 Query: 61 NGKAXETKVL--LW--IKSIVGNSPWGFQQDGAPAHAFKKAQEWL-----------KDNMNFWPKDYWPPQSPDLNPLDF 125 NG+ + VL +W +K + F QDGA +H E+L K N+ WPP+SP++NPLDF Sbjct: 22 NGEVYKVGVLDHVWNKVKGQATRKGYYFMQDGASSHTTNANLEFLLSKFQGRVISNKTNI------IWPPKSPNMNPLDF 243
BLAST of EMLSAG00000004750 vs. C. finmarchicus
Match: gi|592848948|gb|GAXK01108596.1| (TSA: Calanus finmarchicus comp4118668_c0_seq1 transcribed RNA sequence) HSP 1 Score: 31.9574 bits (71), Expect = 3.207e-1 Identity = 18/52 (34.62%), Postives = 24/52 (46.15%), Query Frame = 0 Query: 83 GFQQDGAPAHAFKKAQEWLKDN-------MNFWPKDYWPPQSPDLNPLDFSI 127 G +DGA H K +L M+ WP +SPDLNPLD+ + Sbjct: 64 GSLKDGATLHRTVKVLRYLDGQFGERILAMDSIRGREWPARSPDLNPLDYFV 219
BLAST of EMLSAG00000004750 vs. C. finmarchicus
Match: gi|592868678|gb|GAXK01088884.1| (TSA: Calanus finmarchicus comp5428495_c0_seq1 transcribed RNA sequence) HSP 1 Score: 31.5722 bits (70), Expect = 3.576e-1 Identity = 11/13 (84.62%), Postives = 13/13 (100.00%), Query Frame = 0 Query: 113 WPPQSPDLNPLDF 125 WPP+SPDLNPLD+ Sbjct: 41 WPPKSPDLNPLDY 79
BLAST of EMLSAG00000004750 vs. C. finmarchicus
Match: gi|592894985|gb|GAXK01063390.1| (TSA: Calanus finmarchicus comp8453423_c0_seq1 transcribed RNA sequence) HSP 1 Score: 30.4166 bits (67), Expect = 1.131e+0 Identity = 15/24 (62.50%), Postives = 18/24 (75.00%), Query Frame = 0 Query: 7 RIIIFSDEKTFTVDPVFNRQNDRV 30 R IIFSDEK FT+ P N+QN R+ Sbjct: 12 RKIIFSDEKWFTLVPHPNKQNTRI 83
BLAST of EMLSAG00000004750 vs. C. finmarchicus
Match: gi|592806581|gb|GAXK01147987.1| (TSA: Calanus finmarchicus comp4705987_c0_seq1 transcribed RNA sequence) HSP 1 Score: 29.261 bits (64), Expect = 2.962e+0 Identity = 10/13 (76.92%), Postives = 12/13 (92.31%), Query Frame = 0 Query: 113 WPPQSPDLNPLDF 125 WPP+SPDLNP D+ Sbjct: 177 WPPKSPDLNPFDY 215
BLAST of EMLSAG00000004750 vs. L. salmonis peptides
Match: EMLSAP00000004750 (pep:novel supercontig:LSalAtl2s:LSalAtl2s24:1286685:1290496:-1 gene:EMLSAG00000004750 transcript:EMLSAT00000004750 description:"snap-LSalAtl2s24-processed-gene-13.77") HSP 1 Score: 261.536 bits (667), Expect = 1.093e-90 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0 Query: 1 MKSSSGRIIIFSDEKTFTVDPVFNRQNDRVVSFEDVQDKHRYVATTKHPASVMMLGLVASNGKAXETKVLLWIKSIVGNSPWGFQQDGAPAHAFKKAQEWLKDNMNFWPKDYWPPQSPDLNPLDFSI 127 MKSSSGRIIIFSDEKTFTVDPVFNRQNDRVVSFEDVQDKHRYVATTKHPASVMMLGLVASNGKAXETKVLLWIKSIVGNSPWGFQQDGAPAHAFKKAQEWLKDNMNFWPKDYWPPQSPDLNPLDFSI Sbjct: 1 MKSSSGRIIIFSDEKTFTVDPVFNRQNDRVVSFEDVQDKHRYVATTKHPASVMMLGLVASNGKAXETKVLLWIKSIVGNSPWGFQQDGAPAHAFKKAQEWLKDNMNFWPKDYWPPQSPDLNPLDFSI 127
BLAST of EMLSAG00000004750 vs. L. salmonis peptides
Match: EMLSAP00000008303 (pep:novel supercontig:LSalAtl2s:LSalAtl2s503:210067:213886:1 gene:EMLSAG00000008303 transcript:EMLSAT00000008303 description:"snap_masked-LSalAtl2s503-processed-gene-2.8") HSP 1 Score: 75.0998 bits (183), Expect = 2.113e-17 Identity = 48/146 (32.88%), Postives = 73/146 (50.00%), Query Frame = 0 Query: 1 MKSSSGRIIIFSDEKTFTVDPVFNRQNDRVVSFEDVQDKHRYVATTKHPASVMMLGLVASNGKAX--------------------ETKVLLWIKSIVGNSPWGFQQDGAPAHAFKKAQEWLKD-NMNFWPKDYWPPQSPDLNPLDF 125 ++S GRII FSDEK +T + +N +ND+ ++ E +++ V TK PASVM LG++ S G+ E V+ W+K + FQQD A H ++ ++ FW ++ WP SPDLNP D+ Sbjct: 119 LESHGGRIIFFSDEKNWTFNRSYNVRNDKWLAKE--KEEVPAVFITKFPASVMTLGVICSTGEVMPPFFFNPKERVNVIRYCEVMEEFVIPWMKDTAAEREFIFQQDSA--HIVRRTTNLFNSHDIPFWDRNTWPSNSPDLNPCDY 260
BLAST of EMLSAG00000004750 vs. L. salmonis peptides
Match: EMLSAP00000012819 (pep:novel supercontig:LSalAtl2s:LSalAtl2s977:186536:195143:1 gene:EMLSAG00000012819 transcript:EMLSAT00000012819 description:"snap-LSalAtl2s977-processed-gene-2.45") HSP 1 Score: 69.707 bits (169), Expect = 3.413e-15 Identity = 38/102 (37.25%), Postives = 53/102 (51.96%), Query Frame = 0 Query: 47 KHPASVMMLGLVASNGKAX--------------------ETKVLLWIKSIVGNSPWGFQQDGAPAHAFKKAQEWLKDNM-NFWPKDYWPPQSPDLNPLDFSI 127 K PA+VM+ G+V+S G E VL WI+ + G+ PW +QQD AP H K + +WL +N + K WPP SP+LNPLD+ + Sbjct: 4 KFPATVMVFGVVSSEGHVMPPHMFELGLKVNTEVYLDVMEKVVLPWIQGLGGDRPWVWQQDSAPCHVSKISLQWLTENCYDIVTKALWPPNSPNLNPLDYFV 105
BLAST of EMLSAG00000004750 vs. L. salmonis peptides
Match: EMLSAP00000012291 (pep:novel supercontig:LSalAtl2s:LSalAtl2s898:43780:47597:-1 gene:EMLSAG00000012291 transcript:EMLSAT00000012291 description:"snap-LSalAtl2s898-processed-gene-0.60") HSP 1 Score: 50.0618 bits (118), Expect = 5.223e-9 Identity = 21/31 (67.74%), Postives = 25/31 (80.65%), Query Frame = 0 Query: 97 AQEWLKDNMNFWPKDYWPPQSPDLNPLDFSI 127 AQ+WL NM FW K+ PPQSPDLNPLD+S+ Sbjct: 2 AQDWLTANMPFWNKNICPPQSPDLNPLDYSV 32
BLAST of EMLSAG00000004750 vs. Select Arthropod Genomes
Match: gb|KFM77814.1| (Transposable element Tcb2 transposase, partial [Stegodyphus mimosarum]) HSP 1 Score: 56.225 bits (134), Expect = 5.085e-10 Identity = 25/62 (40.32%), Postives = 38/62 (61.29%), Query Frame = 0 Query: 67 TKVLLWIKSIVGNSPWGFQQDGAPAHAFKKAQEWLKDNM-NFWPKDYWPPQSPDLNPLDFSI 127 T V WI + P+ ++Q+ AP H K+Q+WL +N +F + WPP SPDLNP+D+ + Sbjct: 103 TVVKPWITRVAKGRPYVWEQNSAPCHTSGKSQKWLSENFYDFTSPNVWPPNSPDLNPMDYFV 164
BLAST of EMLSAG00000004750 vs. Select Arthropod Genomes
Match: gb|KFM74536.1| (Transposable element Tcb2 transposase, partial [Stegodyphus mimosarum]) HSP 1 Score: 48.1358 bits (113), Expect = 3.212e-7 Identity = 22/57 (38.60%), Postives = 33/57 (57.89%), Query Frame = 0 Query: 72 WIKSIVGNSPWGFQQDGAPAHAFKKAQEWLKDNMNFWPK-DYWPPQSPDLNPLDFSI 127 WI + +P+ +QQD AP H K +WL + +P + WPP S DLNP+D+ + Sbjct: 27 WITRVAKVTPYVWQQDSAPCHTSGKGTKWLSEIYYDFPSPNVWPPNSLDLNPMDYFV 83
BLAST of EMLSAG00000004750 vs. nr
Match: gi|1070160224|ref|XP_018360127.1| (PREDICTED: uncharacterized protein LOC108759269 [Trachymyrmex cornetzi]) HSP 1 Score: 110.923 bits (276), Expect = 5.470e-28 Identity = 65/148 (43.92%), Postives = 87/148 (58.78%), Query Frame = 0 Query: 3 SSSGRIIIFSDEKTFTVDPVFNRQNDRVVSF--EDVQDKHRYVATTKHPASVMMLGLVASNG---------------KAXETKVLL-----WIKSIVGNSPWGFQQDGAPAHAFKKAQEWLKDNMN-FWPKDYWPPQSPDLNPLDFSI 127 +++GR+ FSDEK FTVD NR+NDR ++ EDV VA TK PA+V +LG+V+S G K +VL W++++ P+ FQQDGAPAH Q WL DN++ FW K++WPP SPDLNPLDF + Sbjct: 46 NAAGRLKFFSDEKIFTVDAKINRRNDRWLAHNPEDVP----IVARTKFPANVHVLGVVSSEGDVMPPHFFNKGENVTKEVYLRVLTNVVKPWMETVSSGKPYVFQQDGAPAHTSHLVQNWLLDNIDMFWSKEFWPPNSPDLNPLDFYV 189
BLAST of EMLSAG00000004750 vs. nr
Match: gi|861618518|gb|KMQ86834.1| (transposable element tcb2 transposase [Lasius niger]) HSP 1 Score: 112.464 bits (280), Expect = 2.588e-27 Identity = 64/146 (43.84%), Postives = 85/146 (58.22%), Query Frame = 0 Query: 5 SGRIIIFSDEKTFTVDPVFNRQNDRVVSF--EDVQDKHRYVATTKHPASVMMLGLVASNG---------------KAXETKVLL-----WIKSIVGNSPWGFQQDGAPAHAFKKAQEWLKDNMN-FWPKDYWPPQSPDLNPLDFSI 127 SGRII FSDEK F++D NR+NDR ++ EDV +A TK PASV +LG+V++ G K +VL W+ ++ P+ FQQDGAPAH Q WL DN++ FW K++WPP SPDLNPLD+ + Sbjct: 162 SGRIIFFSDEKIFSIDAKVNRRNDRWLANDPEDVP----VIARTKFPASVHVLGVVSNEGHVMPPHFFQKKETITKEVYLRVLTKIVKPWMDTVAAGRPYIFQQDGAPAHTSHLVQNWLSDNVDLFWSKEFWPPNSPDLNPLDYYV 303
BLAST of EMLSAG00000004750 vs. nr
Match: gi|309357502|emb|CAS00486.1| (Protein CBG27381 [Caenorhabditis briggsae]) HSP 1 Score: 109.383 bits (272), Expect = 3.876e-27 Identity = 59/143 (41.26%), Postives = 78/143 (54.55%), Query Frame = 0 Query: 8 IIIFSDEKTFTVDPVFNRQNDRVVS--FEDVQDKHRYVATTKHPASVMMLGLVASNGKA--------------------XETKVLLWIKSIVGNSPWGFQQDGAPAHAFKKAQEWLKDNM-NFWPKDYWPPQSPDLNPLDFSI 127 I IFSDEK F+V+ FN QN RV++ + ++ + + HPAS+M+ G V +GK E VL W ++ G + FQQDGAPAH K AQ+W KD+ F PKD WP SPDLNPLD+S+ Sbjct: 38 ITIFSDEKLFSVEAEFNSQNHRVLATNIQQAAERGKTIHRASHPASIMVFGAVCYDGKCPLVFVDKGVKINQKYYVEEILEKHVLPWAQNHFGQKKYIFQQDGAPAHTAKMAQQWCKDHFPAFIPKDEWPASSPDLNPLDYSV 180
BLAST of EMLSAG00000004750 vs. nr
Match: gi|1134651576|ref|XP_019886946.1| (PREDICTED: uncharacterized protein LOC109610920 [Cerapachys biroi]) HSP 1 Score: 107.842 bits (268), Expect = 8.427e-26 Identity = 61/147 (41.50%), Postives = 82/147 (55.78%), Query Frame = 0 Query: 4 SSGRIIIFSDEKTFTVDPVFNRQNDRVVSF--EDVQDKHRYVATTKHPASVMMLGLVASNG--------------------KAXETKVLLWIKSIVGNSPWGFQQDGAPAHAFKKAQEWLKDNMN-FWPKDYWPPQSPDLNPLDFSI 127 ++GRI FSDEK FTVD NR+NDR ++ ED+ V TK PA++ +L +V+S G K T V W++++ P+ FQQDGAPAH Q WL DN++ FW KD+W P SPDLNPLD+ + Sbjct: 151 AAGRIRFFSDEKIFTVDAKVNRRNDRWLAHNPEDIP----VVGKTKFPANIHVLSVVSSEGDIMPPHFFQKRETVTKEVYLKVLRTVVKPWMETVASGRPYIFQQDGAPAHTSHLIQNWLSDNVDMFWSKDFWSPNSPDLNPLDYYV 293
BLAST of EMLSAG00000004750 vs. nr
Match: gi|780721378|ref|XP_011707025.1| (PREDICTED: uncharacterized protein LOC105462195 [Wasmannia auropunctata]) HSP 1 Score: 107.071 bits (266), Expect = 2.898e-25 Identity = 62/148 (41.89%), Postives = 85/148 (57.43%), Query Frame = 0 Query: 3 SSSGRIIIFSDEKTFTVDPVFNRQNDRVVSF--EDVQDKHRYVATTKHPASVMMLGLVASNG---------------KAXETKVLL-----WIKSIVGNSPWGFQQDGAPAHAFKKAQEWLKDNMN-FWPKDYWPPQSPDLNPLDFSI 127 +++GR+ FSDEK FTVD N++ND ++ EDV +A TK PA+V +LG+V+S G K +VL WI+++ P+ FQQ+GAPAH Q WL DN+ FW K++WPP SPDLNPLDF + Sbjct: 170 NAAGRLKFFSDEKIFTVDAKINQRNDHWLAHNPEDVP-----IARTKFPANVHVLGVVSSEGDVMSPYFFNKGENVTKEVYLRVLTNVVKPWIETVSSGKPYVFQQNGAPAHTSHLVQNWLSDNVEMFWSKEFWPPNSPDLNPLDFYV 312
BLAST of EMLSAG00000004750 vs. nr
Match: gi|308490733|ref|XP_003107558.1| (hypothetical protein CRE_13338 [Caenorhabditis remanei] >gi|308250427|gb|EFO94379.1| hypothetical protein CRE_13338 [Caenorhabditis remanei]) HSP 1 Score: 105.916 bits (263), Expect = 4.898e-25 Identity = 59/143 (41.26%), Postives = 77/143 (53.85%), Query Frame = 0 Query: 8 IIIFSDEKTFTVDPVFNRQNDRVV--SFEDVQDKHRYVATTKHPASVMMLGLVASNGKA--------------------XETKVLLWIKSIVGNSPWGFQQDGAPAHAFKKAQEWLKDNM-NFWPKDYWPPQSPDLNPLDFSI 127 + +FSDEK FTV FN QN RV+ + E+ R + HPASVM+ G V ++GK+ E +L W + W FQQDGAPAH K +Q+W + ++ F PKD WPP SPDLNPLD+SI Sbjct: 123 VTVFSDEKLFTVQAEFNPQNHRVLAETSEEAFANGRTIHQASHPASVMVFGAVCADGKSPLLFVDQGVKINKEVYISQILEKTLLPWAQKHFNGRRWVFQQDGAPAHTAKLSQQWCETHLPAFIPKDEWPPSSPDLNPLDYSI 265
BLAST of EMLSAG00000004750 vs. nr
Match: gi|597885080|gb|EYC34439.1| (hypothetical protein Y032_0001g415 [Ancylostoma ceylanicum]) HSP 1 Score: 105.145 bits (261), Expect = 7.321e-25 Identity = 58/151 (38.41%), Postives = 81/151 (53.64%), Query Frame = 0 Query: 2 KSSSGRII--IFSDEKTFTVDPVFNRQNDRVVS--FEDVQDKHRYVATTKHPASVMMLGLVASNGKA--------------------XETKVLLWIKSIVGNSPWGFQQDGAPAHAFKKAQEWLKDNM-NFWPKDYWPPQSPDLNPLDFSI 127 +++ GR + +FSDEK FTV NRQNDR++S E+ R V HP S M+ + S+G + + ++ W+ S G+ P+ FQQDGAPAH K QEW + N+ +F + WPP SPDLNPLD+SI Sbjct: 108 RAADGRHLKFVFSDEKLFTVQAFHNRQNDRILSESMEEANRNGRLVPKKAHPQSDMVASFITSDGNSPLIFVDSGVKINRQNYLDDVLKKHLIPWLHSHFGDRPYTFQQDGAPAHTAKMVQEWCRANLSDFIAAEEWPPCSPDLNPLDYSI 258
BLAST of EMLSAG00000004750 vs. nr
Match: gi|308471085|ref|XP_003097774.1| (hypothetical protein CRE_13649 [Caenorhabditis remanei] >gi|308239312|gb|EFO83264.1| hypothetical protein CRE_13649 [Caenorhabditis remanei]) HSP 1 Score: 105.531 bits (262), Expect = 7.911e-25 Identity = 59/143 (41.26%), Postives = 77/143 (53.85%), Query Frame = 0 Query: 8 IIIFSDEKTFTVDPVFNRQNDRVV--SFEDVQDKHRYVATTKHPASVMMLGLVASNGKA--------------------XETKVLLWIKSIVGNSPWGFQQDGAPAHAFKKAQEWLKDNM-NFWPKDYWPPQSPDLNPLDFSI 127 + +FSDEK FTV FN QN RV+ + E+ R + HPASVM+ G V ++GK+ E +L W + W FQQDGAPAH K +Q+W + ++ F PKD WPP SPDLNPLD+SI Sbjct: 142 VTVFSDEKLFTVQAEFNPQNHRVLAETSEEAFANGRTIHQASHPASVMVFGAVCADGKSPLLFVDQGVKINKEVYISQILEKTLLPWAQKHFNGRRWVFQQDGAPAHTAKLSQQWCETHLPAFIPKDEWPPSSPDLNPLDYSI 284
BLAST of EMLSAG00000004750 vs. nr
Match: gi|308495282|ref|XP_003109829.1| (hypothetical protein CRE_06559 [Caenorhabditis remanei] >gi|308244666|gb|EFO88618.1| hypothetical protein CRE_06559 [Caenorhabditis remanei]) HSP 1 Score: 105.531 bits (262), Expect = 8.692e-25 Identity = 59/143 (41.26%), Postives = 77/143 (53.85%), Query Frame = 0 Query: 8 IIIFSDEKTFTVDPVFNRQNDRVV--SFEDVQDKHRYVATTKHPASVMMLGLVASNGKA--------------------XETKVLLWIKSIVGNSPWGFQQDGAPAHAFKKAQEWLKDNM-NFWPKDYWPPQSPDLNPLDFSI 127 + +FSDEK FTV FN QN RV+ + E+ R + HPASVM+ G V ++GK+ E +L W + W FQQDGAPAH K +Q+W + ++ F PKD WPP SPDLNPLD+SI Sbjct: 142 VTVFSDEKLFTVQAEFNPQNHRVLAETSEEAFANGRTIHQASHPASVMVFGAVCADGKSPLLFVVQGVKINKEVYISQILEKTLLPWAQKHFNGRRWVFQQDGAPAHTAKLSQQWCETHLPAFIPKDEWPPSSPDLNPLDYSI 284
BLAST of EMLSAG00000004750 vs. nr
Match: gi|308468982|ref|XP_003096731.1| (hypothetical protein CRE_23042 [Caenorhabditis remanei] >gi|308241545|gb|EFO85497.1| hypothetical protein CRE_23042 [Caenorhabditis remanei]) HSP 1 Score: 105.531 bits (262), Expect = 8.969e-25 Identity = 59/143 (41.26%), Postives = 77/143 (53.85%), Query Frame = 0 Query: 8 IIIFSDEKTFTVDPVFNRQNDRVV--SFEDVQDKHRYVATTKHPASVMMLGLVASNGKA--------------------XETKVLLWIKSIVGNSPWGFQQDGAPAHAFKKAQEWLKDNM-NFWPKDYWPPQSPDLNPLDFSI 127 + +FSDEK FTV FN QN RV+ + E+ R + HPASVM+ G V ++GK+ E +L W + W FQQDGAPAH K +Q+W + ++ F PKD WPP SPDLNPLD+SI Sbjct: 142 VTVFSDEKLFTVQAEFNPQNHRVLAETSEEAFANGRTIHQASHPASVMVFGAVCADGKSPLLFVDQGVKINKEVYISQILEKTLLPWAQKHFNGRRWVFQQDGAPAHTAKLSQQWCETHLPAFIPKDEWPPSSPDLNPLDYSI 284
BLAST of EMLSAG00000004750 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold340_size202118-processed-gene-1.17 (protein:Tk00684 transcript:snap_masked-scaffold340_size202118-processed-gene-1.17-mRNA-1 annotation:"hypothetical protein AND_000720") HSP 1 Score: 103.99 bits (258), Expect = 2.920e-27 Identity = 59/149 (39.60%), Postives = 83/149 (55.70%), Query Frame = 0 Query: 2 KSSSGRIIIFSDEKTFTVDPVFNRQNDRVV--SFEDVQDKHRYVATTKHPASVMMLGLVASNGKAXE------------------TKVLLWIKSIVGNSPWGFQQDGAPAHAFKKAQEWLKDNMN---FWPKDYWPPQSPDLNPLDFSI 127 K++ GR++ FSDEK F VD R+NDR + S +D + R+V+ +KHPAS MMLG V ++GKA KV + + G + + + QDGAPAH Q +L+ + FW K+ WPP SP+LNPLD+SI Sbjct: 44 KNNDGRVVKFSDEKHFLVDKYLKRRNDRYIAASVKDAAPETRFVSRSKHPASSMMLGYVGADGKAFPPIWFEGSVNNPTYKKDLIHKVFPTLDATYGPNGYIWTQDGAPAHTSMNVQGYLERRLGSDGFWSKEVWPPSSPNLNPLDYSI 192
BLAST of EMLSAG00000004750 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold15_size728074-processed-gene-0.6 (protein:Tk08839 transcript:snap_masked-scaffold15_size728074-processed-gene-0.6-mRNA-1 annotation:"PREDICTED: uncharacterized protein K02A2.6-like") HSP 1 Score: 87.8113 bits (216), Expect = 9.137e-22 Identity = 46/112 (41.07%), Postives = 63/112 (56.25%), Query Frame = 0 Query: 24 NRQNDRVVSFEDVQDKHRYVATTKHPASVMMLGLVASNGKAX--------------------ETKVLLWIKSIVGNSPWGFQQDGAPAHAFKKAQEWLKDNMNFWPKDYWPP 115 NR+NDR ++F V+++ R + T KHPASVM LG VASNGKA TK++ W+++ + +QDGAPAH K AQ +L+ N+ FW K WPP Sbjct: 275 NRKNDRFLAFGPVEEEERTLMTAKHPASVMSLGFVASNGKAMPLLWFKTEYRLNGADYVKLLRTKLIRWVRTNFPDGIVVLKQDGAPAHTSKVAQSFLEGNIPFWSKKMWPP 386
BLAST of EMLSAG00000004750 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold15_size728074-snap-gene-1.11 (protein:Tk08843 transcript:maker-scaffold15_size728074-snap-gene-1.11-mRNA-1 annotation:"mitogen-activated protein kinase 3") HSP 1 Score: 85.1149 bits (209), Expect = 1.129e-20 Identity = 42/73 (57.53%), Postives = 54/73 (73.97%), Query Frame = 0 Query: 3 SSSGRIIIFSDEKTFTVDPVFNRQNDRVVSFEDVQDKHRYVATTKHPASVMMLGLVASNGKAXETKVLLWIKS 75 + + RIIIFSD+KT+TVDPV NR+NDR ++F V+++ R + T K PASVM LG VASNGKA LLW K+ Sbjct: 293 AKANRIIIFSDKKTWTVDPVRNRKNDRFLAFGPVEEEERTLMTAKDPASVMSLGFVASNGKAMP---LLWFKT 362
BLAST of EMLSAG00000004750 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold1099_size62903-processed-gene-0.6 (protein:Tk01128 transcript:snap_masked-scaffold1099_size62903-processed-gene-0.6-mRNA-1 annotation:"kinesin-like protein kif3a isoform x2") HSP 1 Score: 79.7221 bits (195), Expect = 1.027e-18 Identity = 38/60 (63.33%), Postives = 45/60 (75.00%), Query Frame = 0 Query: 1 MKSSSGRIIIFSDEKTFTVDPVFNRQNDRVVSFEDVQDKHRYVATTKHPASVMMLGLVAS 60 +K R+I +SDEKTFTVDPV N+QNDRV+ F R V+TTKHPASVMMLG+VAS Sbjct: 125 LKHHKRRVIFYSDEKTFTVDPVINKQNDRVICFGKEDYNIRNVSTTKHPASVMMLGVVAS 184
BLAST of EMLSAG00000004750 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold534_size144770-processed-gene-0.19 (protein:Tk11149 transcript:snap_masked-scaffold534_size144770-processed-gene-0.19-mRNA-1 annotation:"transposable element tcb2 transposase") HSP 1 Score: 68.9366 bits (167), Expect = 3.203e-15 Identity = 55/149 (36.91%), Postives = 71/149 (47.65%), Query Frame = 0 Query: 2 KSSSGRIIIFSDEKTFTVDPVFNRQNDRVVSFEDVQDKHRYVATTKHPASVMMLGLVASNGKAX--------------------ETKVLLWIKSIVGNSPWGFQ----QDGAPAHAFKKAQEWLKDNMNFWPKDY-WPPQSPDLNPLDF 125 K + G I +FSDE FTVD +N NDR +S E + V TK PA +M+ GL+ S+GK E VL W++S N P + QD APA KKA +L N + + + WP SPDLNP DF Sbjct: 136 KVNPGIIKLFSDESNFTVDGAYNPVNDRWLSEE--RSGVPPVMKTKFPAKIMVFGLITSDGKVMPAHIFQEGLKVNTDVYVGLLEKVVLPWLRS---NYPHDTKFMRVQDSAPALVSKKAMAFLTANFDVVVEPHQWPSNSPDLNPCDF 279
BLAST of EMLSAG00000004750 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold33_size549341-processed-gene-2.6 (protein:Tk11540 transcript:snap_masked-scaffold33_size549341-processed-gene-2.6-mRNA-1 annotation:"Importin-11") HSP 1 Score: 64.6994 bits (156), Expect = 1.677e-13 Identity = 34/83 (40.96%), Postives = 50/83 (60.24%), Query Frame = 0 Query: 2 KSSSGRIIIFSDEKTFTVDPVFNRQNDRVVSF--EDVQDKHRYVATTKHPASVMMLGLVASNGKAXETKVLLWIKSIVGNSPW 82 K + +++IFSDEK FTVD V N + R ++ EDV RY +KHPA MMLG+V S+GKA +W+K + ++ + Sbjct: 603 KKPADQVLIFSDEKIFTVDAVSNSRTTRYIAKRPEDVHPSVRYQGRSKHPAGAMMLGVVGSDGKAFPP---IWVKGTMDSTQY 682
BLAST of EMLSAG00000004750 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold234_size243041-snap-gene-1.28 (protein:Tk10943 transcript:maker-scaffold234_size243041-snap-gene-1.28-mRNA-1 annotation:"hypothetical protein EAG_00300") HSP 1 Score: 63.929 bits (154), Expect = 2.880e-13 Identity = 43/121 (35.54%), Postives = 61/121 (50.41%), Query Frame = 0 Query: 1 MKSSSGRIIIFSDEKTFTVDPVFNRQNDRVV--SFEDVQDKHRYVATTKHPASVMMLGLVASNGKAXETK--------------------VLLWIKSIVGNSPWGFQQDGAPAHAFKKAQE 99 +K + I SD+K FTVD V+NR+NDR + S E+V+ R TKHPA VM++G++AS+GK VL W+K+ + QDGAP+H K Q+ Sbjct: 96 LKRHGSTVKIISDKKIFTVDQVYNRRNDRFIAGSPEEVKGVFR----TKHPAQVMVMGVLASDGKKMPPNCFRVGEKIGANEYYKVLSYTVLPWLKAQYPEDNNVWTQDGAPSHTSVKHQK 212
BLAST of EMLSAG00000004750 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold1582_size34879-snap-gene-0.4 (protein:Tk03722 transcript:maker-scaffold1582_size34879-snap-gene-0.4-mRNA-1 annotation:"hypothetical protein L798_10150 partial") HSP 1 Score: 63.5438 bits (153), Expect = 4.586e-13 Identity = 34/65 (52.31%), Postives = 46/65 (70.77%), Query Frame = 0 Query: 1 MKSSSGRIIIFSDEKTFTVDPVFNRQNDRVV--SFEDVQDKHRYVATTKHPASVMMLGLVASNGK 63 MK + + IFSD+K FTV V+NR+NDR + S +VQ +R TKHPAS+M+LG+VASNG+ Sbjct: 970 MKHDTATVKIFSDKKIFTVGQVYNRRNDRFLAQSPSEVQGVYR----TKHPASIMVLGVVASNGR 1030
BLAST of EMLSAG00000004750 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold330_size203968-snap-gene-0.22 (protein:Tk05065 transcript:maker-scaffold330_size203968-snap-gene-0.22-mRNA-1 annotation:"transposable element tcb2 transposase") HSP 1 Score: 63.5438 bits (153), Expect = 4.768e-13 Identity = 40/97 (41.24%), Postives = 50/97 (51.55%), Query Frame = 0 Query: 54 MLGLVASNG------------KAXETKVLLWIKSI--------VGNSPWGFQQDGAPAHAFKKAQEWLKDNMN---FWPKDYWPPQSPDLNPLDFSI 127 MLG+V SNG KA E K +L K VGN W QQDGAPAH Q +++ + FW K +WPP SP+LNPLD+S+ Sbjct: 1 MLGVVCSNGVKLPPIWVKGTLKATEYKSILVHKVFPVLDATLGVGNYIW--QQDGAPAHTADAVQSYIERRLGSSGFWSKGFWPPSSPNLNPLDYSV 95
BLAST of EMLSAG00000004750 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold1486_size38793-processed-gene-0.1 (protein:Tk01003 transcript:snap_masked-scaffold1486_size38793-processed-gene-0.1-mRNA-1 annotation:"hypothetical protein EAG_00300") HSP 1 Score: 61.2326 bits (147), Expect = 2.180e-12 Identity = 44/120 (36.67%), Postives = 60/120 (50.00%), Query Frame = 0 Query: 1 MKSSSGRIIIFSDEKTFTVDPVFNRQNDRVV--SFEDVQDKHRYVATTKHPASVMMLGLVASNG--------------------KAXETKVLLWIKSIVGNSPWGFQQDG-APAHAFKKA 97 +K + IFSD+K FTVD V+NRQNDR + S E+V+ R TKHPA VM+LG++A +G K VL W+K+ + + QDG P H+ K A Sbjct: 16 LKRHGSNVKIFSDKKIFTVDQVYNRQNDRFIAGSPEEVKGVFR----TKHPAQVMVLGVLAIDGKKMPPNFFRVGEKIGANEYYKVLRYTVLPWLKAQYPEDNYVWTQDGFLPTHSLKCA 131 The following BLAST results are available for this feature:
BLAST of EMLSAG00000004750 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000004750 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 6
BLAST of EMLSAG00000004750 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 4
BLAST of EMLSAG00000004750 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000004750 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 2
BLAST of EMLSAG00000004750 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
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BLAST of EMLSAG00000004750 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s24:1286685..1290496- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000004750-687516 ID=EMLSAG00000004750-687516|Name=EMLSAG00000004750|organism=Lepeophtheirus salmonis|type=gene|length=3812bp|location=Sequence derived from alignment at LSalAtl2s24:1286685..1290496- (Lepeophtheirus salmonis)back to top Add to Basket
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