EMLSAG00000004810, EMLSAG00000004810-687576 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Homology
BLAST of EMLSAG00000004810 vs. C. finmarchicus
Match: gi|592779110|gb|GAXK01175458.1| (TSA: Calanus finmarchicus comp2670_c3_seq14 transcribed RNA sequence) HSP 1 Score: 332.798 bits (852), Expect = 8.685e-112 Identity = 160/219 (73.06%), Postives = 195/219 (89.04%), Query Frame = 0 Query: 1 MKKDETVSSIQKDPLLECTHKNVEKCHYTYITQFSPSQEEVCDENFEKSCQITFKQQAFNETIKKCYKPLEKVCNGQGPEECRTLYESSCTTKYVEKQPGKFVGDTSCEKLPIEICGAGCTTEEGPEECHDKTVTSLVDIPEEICDLNPQKTCRFQTKLVPRLKPAHECTTIPQETXNLKFTQPRKVDKPLKTKWCLDDTPPVPGETYDENNALGAPIG 219 ++K+ETV+S++K+P+LECTHKN E+CHYTY+TQF PSQEEVCDE FEK+C ITFKQQAF + + KCY+P+EKVCNGQG E C+T+YESSCTTKYVEKQPGKFVGDT CEKLP+EICGAGCT EEG EECH+K +TS+VD+PEE+CDLNPQK C+F TKLVP+L P HECT +P+ET LKFTQP++V+KPL+T+WCLD TP PGE+YDE +ALGAP+G Sbjct: 239 VEKEETVTSLEKEPILECTHKNTEQCHYTYVTQFKPSQEEVCDETFEKTCSITFKQQAFEDVVNKCYRPVEKVCNGQGEEVCQTVYESSCTTKYVEKQPGKFVGDTGCEKLPVEICGAGCTFEEGEEECHEKVITSVVDVPEEVCDLNPQKICKFVTKLVPKLSPKHECTIVPKETCLLKFTQPKQVEKPLQTRWCLDPTPAAPGESYDEEDALGAPLG 895
BLAST of EMLSAG00000004810 vs. C. finmarchicus
Match: gi|592779107|gb|GAXK01175461.1| (TSA: Calanus finmarchicus comp2670_c3_seq17 transcribed RNA sequence) HSP 1 Score: 332.028 bits (850), Expect = 1.284e-111 Identity = 153/215 (71.16%), Postives = 185/215 (86.05%), Query Frame = 0 Query: 1 MKKDETVSSIQKDPLLECTHKNVEKCHYTYITQFSPSQEEVCDENFEKSCQITFKQQAFNETIKKCYKPLEKVCNGQGPEECRTLYESSCTTKYVEKQPGKFVGDTSCEKLPIEICGAGCTTEEGPEECHDKTVTSLVDIPEEICDLNPQKTCRFQTKLVPRLKPAHECTTIPQETXNLKFTQPRKVDKPLKTKWCLDDTPPVPGETYDENNALG 215 + K+ETV+S++K+P+LECTHKN E+CHYTY+TQF PSQEEVCDE FEK+C ITFKQQAF + + KCY+P+EKVCNGQG E C+T+YESSCTTKYVEKQPGKFVGDT CEKLP+EICGAGCT EEG + CH KTV SLVD PEE+CDLNPQKTCR TKLVP+L P+HECT +P+ET +LKF+ P V +PL++ WCLD TPP PG++Y+E+ ALG Sbjct: 184 VDKEETVTSLEKEPILECTHKNTEQCHYTYVTQFKPSQEEVCDETFEKTCSITFKQQAFEDVVNKCYRPVEKVCNGQGEEVCQTVYESSCTTKYVEKQPGKFVGDTGCEKLPVEICGAGCTFEEGEQNCHMKTVASLVDTPEEVCDLNPQKTCRHVTKLVPKLAPSHECTIVPKETCHLKFSNPEVVKEPLRSIWCLDPTPPTPGDSYEESEALG 828
BLAST of EMLSAG00000004810 vs. C. finmarchicus
Match: gi|592779109|gb|GAXK01175459.1| (TSA: Calanus finmarchicus comp2670_c3_seq15 transcribed RNA sequence) HSP 1 Score: 332.028 bits (850), Expect = 1.400e-111 Identity = 154/215 (71.63%), Postives = 188/215 (87.44%), Query Frame = 0 Query: 1 MKKDETVSSIQKDPLLECTHKNVEKCHYTYITQFSPSQEEVCDENFEKSCQITFKQQAFNETIKKCYKPLEKVCNGQGPEECRTLYESSCTTKYVEKQPGKFVGDTSCEKLPIEICGAGCTTEEGPEECHDKTVTSLVDIPEEICDLNPQKTCRFQTKLVPRLKPAHECTTIPQETXNLKFTQPRKVDKPLKTKWCLDDTPPVPGETYDENNALG 215 ++K+ETV+S++K+P+LECTHKN E+CHYTY+TQF PSQEEVC+ENFEK C ITFKQQA+NET+ KCY+P+EKVCNGQG E C+T+YESSCTTKYVEKQPGKFVGDT CEKLP+EICGAGCT EEG + CH KTV SLVD PEE+CDLNPQKTCR TKLVP+L P+HECT +P+ET +L+F+ P V++PLK+ WCLD TPP P ++Y+E+ ALG Sbjct: 120 VEKEETVTSLEKEPILECTHKNTEQCHYTYVTQFKPSQEEVCEENFEKQCSITFKQQAYNETVNKCYRPVEKVCNGQGEEVCQTVYESSCTTKYVEKQPGKFVGDTGCEKLPVEICGAGCTFEEGEQNCHMKTVASLVDTPEEVCDLNPQKTCRHVTKLVPKLAPSHECTIVPKETCHLRFSSPEVVEEPLKSIWCLDPTPPTPEDSYEESEALG 764
BLAST of EMLSAG00000004810 vs. C. finmarchicus
Match: gi|592779123|gb|GAXK01175445.1| (TSA: Calanus finmarchicus comp2670_c3_seq1 transcribed RNA sequence) HSP 1 Score: 333.183 bits (853), Expect = 1.910e-111 Identity = 154/215 (71.63%), Postives = 188/215 (87.44%), Query Frame = 0 Query: 1 MKKDETVSSIQKDPLLECTHKNVEKCHYTYITQFSPSQEEVCDENFEKSCQITFKQQAFNETIKKCYKPLEKVCNGQGPEECRTLYESSCTTKYVEKQPGKFVGDTSCEKLPIEICGAGCTTEEGPEECHDKTVTSLVDIPEEICDLNPQKTCRFQTKLVPRLKPAHECTTIPQETXNLKFTQPRKVDKPLKTKWCLDDTPPVPGETYDENNALG 215 ++K+ETV+S++K+P+LECTHKN E+CHYTY+TQF PSQEEVC+ENFEK C ITFKQQA+NET+ KCY+P+EKVCNGQG E C+T+YESSCTTKYVEKQPGKFVGDT CEKLP+EICGAGCT EEG + CH KTV SLVD PEE+CDLNPQKTCR TKLVP+L P+HECT +P+ET +L+F+ P V++PLK+ WCLD TPP P ++Y+E+ ALG Sbjct: 242 VEKEETVTSLEKEPILECTHKNTEQCHYTYVTQFKPSQEEVCEENFEKQCSITFKQQAYNETVNKCYRPVEKVCNGQGEEVCQTVYESSCTTKYVEKQPGKFVGDTGCEKLPVEICGAGCTFEEGEQNCHMKTVASLVDTPEEVCDLNPQKTCRHVTKLVPKLAPSHECTIVPKETCHLRFSSPEVVEEPLKSIWCLDPTPPTPEDSYEESEALG 886
BLAST of EMLSAG00000004810 vs. C. finmarchicus
Match: gi|592779116|gb|GAXK01175452.1| (TSA: Calanus finmarchicus comp2670_c3_seq8 transcribed RNA sequence) HSP 1 Score: 331.643 bits (849), Expect = 3.791e-111 Identity = 153/215 (71.16%), Postives = 186/215 (86.51%), Query Frame = 0 Query: 1 MKKDETVSSIQKDPLLECTHKNVEKCHYTYITQFSPSQEEVCDENFEKSCQITFKQQAFNETIKKCYKPLEKVCNGQGPEECRTLYESSCTTKYVEKQPGKFVGDTSCEKLPIEICGAGCTTEEGPEECHDKTVTSLVDIPEEICDLNPQKTCRFQTKLVPRLKPAHECTTIPQETXNLKFTQPRKVDKPLKTKWCLDDTPPVPGETYDENNALG 215 ++K+ETV+S++K+P+LECTHKN E+CHYTY+TQF PSQEEVCDE FEK+C ITFKQQAF + + KCY+P+EKVCNGQG E C+T+YESSCTTKYVEKQPGKFVGDT CEKLP+EICGAGCT EEG + CH KTV SLVD PEE+CDLNPQKTCR TKLVP+L P+HECT +P+ET +LKF+ P V +PL++ WCLD TPP PG++Y+E+ ALG Sbjct: 239 VEKEETVTSLEKEPILECTHKNTEQCHYTYVTQFKPSQEEVCDETFEKTCSITFKQQAFEDVVNKCYRPVEKVCNGQGEEVCQTVYESSCTTKYVEKQPGKFVGDTGCEKLPVEICGAGCTFEEGEQNCHMKTVASLVDTPEEVCDLNPQKTCRHVTKLVPKLAPSHECTIVPKETCHLKFSNPEVVKEPLRSIWCLDPTPPTPGDSYEESEALG 883
BLAST of EMLSAG00000004810 vs. L. salmonis peptides
Match: EMLSAP00000010865 (pep:novel supercontig:LSalAtl2s:LSalAtl2s722:38346:39694:1 gene:EMLSAG00000010865 transcript:EMLSAT00000010865 description:"augustus_masked-LSalAtl2s722-processed-gene-0.0") HSP 1 Score: 116.701 bits (291), Expect = 4.773e-30 Identity = 78/261 (29.89%), Postives = 114/261 (43.68%), Query Frame = 0 Query: 1 MKKDETVSSIQKDPLLECTHKNVEKCHYTYITQFSPSQEEVCDENFEKSCQITFKQQAFNETIKKCYKPLEKVCNGQ--GPE------------------------ECRTLYESSCTTKYVE------------------------------------KQPGKFVGDTSCEKLPIEICGA-GCTTEEGPEECHDKTVTSLVDIPEEICDLNPQKTCRFQTKLVPRLKPAHECTTIPQETXNLKFTQPRKVDKPLKTKWCLD 198 +KK V D ++C H+ EKCH TY+T +S + E+ C F KSC I FK E +K C+ P+E+ C + GPE EC+ + E C VE K K + C+K+P +IC C T+ G E CH+++ T + +IP+E CDL PQ+ C+F++ L+PRL P C IP++ K PRK+ KP+ WC + Sbjct: 72 IKKVVNVEETVYDRGMDCQHRITEKCHLTYVTDYSSASEKKCGTTFTKSCHIVFKPVPHEEKVKICHTPIEQECGDEVEGPEVCTTEYENHCETIFKTYELEQEEPECKMVEELRCKNATVELVHIPNDDKTTTGPNKPYAVTQDCENWPVQKCELVKKNVTKVHPQSECQKIPQKICHPDNCKTKPGKEICHEESRTQIQNIPQEECDLQPQENCQFESTLIPRLVPHKNCVNIPKDICVHKKDNPRKISKPVIKTWCYN 332
BLAST of EMLSAG00000004810 vs. L. salmonis peptides
Match: EMLSAP00000004486 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2341:3366:4537:-1 gene:EMLSAG00000004486 transcript:EMLSAT00000004486 description:"maker-LSalAtl2s2341-augustus-gene-0.2") HSP 1 Score: 111.694 bits (278), Expect = 1.990e-28 Identity = 74/253 (29.25%), Postives = 110/253 (43.48%), Query Frame = 0 Query: 7 VSSIQKDPLLECTHKNVEKCHYTYITQFSPSQEEVCDENFEKSCQITFKQQAFNETIKKCYKPLEKVCNG--QGPEECRTLYESSCTTKY-----VEKQPG-KFVGDTSCEKLPI----------------------------------------------------EICG-AGCTTEEGPEECHDKTVTSLVDIPEEICDLNPQKTCRFQTKLVPRLKPAHECTTIPQETXNLKFTQPRKVDKPLKTKWCLD 198 V + D LEC H +KCH TY+T FS + E C+ F+K+C I+FK + E +KKC+ P K C QG C+ +YE C T++ ++ +P + V D C+ + I E+C C T G E CH+ + T + +IPEE CDL P++ CR ++ LVP+L P C +P+E P+ + KP+ WC D Sbjct: 76 VQETEYDRGLECQHTFKKKCHVTYVTDFSSAPERRCETTFKKNCHISFKAVPYTEKVKKCHTPYTKKCGDEIQGELVCKDIYEDFCETRFKKYDILQDEPECELVKDLRCKNITIDLLHIPHDNDGGSKVPYAVKETCENWPKQKCELKKKTVQKIHPKTECKKVSREVCAPENCETLPGEEICHEDSQTRIQNIPEENCDLEPEENCRLESTLVPKLVPKENCVKVPKEICVNTKKNPKTITKPILKNWCYD 328
BLAST of EMLSAG00000004810 vs. L. salmonis peptides
Match: EMLSAP00000000128 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1020:112711:132784:1 gene:EMLSAG00000000128 transcript:EMLSAT00000000128 description:"maker-LSalAtl2s1020-augustus-gene-0.16") HSP 1 Score: 107.457 bits (267), Expect = 1.038e-25 Identity = 71/204 (34.80%), Postives = 99/204 (48.53%), Query Frame = 0 Query: 16 LECTHKNVEKCHYTYITQFSPSQEEVCDENFEKSCQITFKQQAFNETIKKCYKPLEKVCNG-QGPEECRTLYESSCTTKY--------------VEKQPGK-------FVGDTS----------CEKLPI------------------------EICG-AGCTTEEGPEECHDKTVTSLVDIPEEICDLNPQKTCRFQTKLVPR 162 +EC H +KCH TYIT +S S E+ CD F+K+C ITF NE +K C+ PL + CNG GPE C+T YE+ C T+Y VE+ + +GD + CEK P+ E+C + C T+ G E CH+++ T + +IPEE CDL PQ+ C ++ LVPR Sbjct: 447 MECQHTFSKKCHLTYITDYSSSAEKKCDTTFKKNCHITFNPVPHNEKVKVCHTPLIRECNGDDGPEICKTEYENHCETQYKVYELEQDEPNCRMVEELRCQNVTVELFHIGDDNGGSPFAVKEKCEKWPVQKCDLQKNNVKKVHPETSCKKVPREVCAPSNCVTKPGDEICHEESRTQIQNIPEEECDLQPQENCHMESSLVPR 650 HSP 2 Score: 63.1586 bits (152), Expect = 2.122e-11 Identity = 52/184 (28.26%), Postives = 77/184 (41.85%), Query Frame = 0 Query: 61 ETIKKCYKPLEKVCNGQ--GPEECRTLYESSCTT--------------KYVEKQPGK--------FVGDTS---------CEKLPIEICG-------------------------AGCTTEEGPEECHDKTVTSLVDIPEEICDLNPQKTCRFQTKLVPRLKPAHECTTIPQETXNLKFTQPRK 186 E +KKC PL K C + GPE C T YE+ C T + VE+ K GD+S CEK P++ C + C T+ G E C++++ T + ++P+E C L P++ CR + LVPRL P + C +P+E P+K Sbjct: 155 EKVKKCRTPLIKECGDEIKGPEVCTTQYENHCETQYKTYELEQDEPNCRMVEELRCKNETIALLHIGGDSSSQPFGVRERCEKWPVQKCELEKKKVTKVHPKTECTKVPKKVCTPSNCKTKPGEEICYEESRTHIQNVPDEECGLQPEENCRMEASLVPRLVPKNNCIKVPKEVCVTTKKNPKK 338 HSP 3 Score: 61.2326 bits (147), Expect = 1.021e-10 Identity = 48/161 (29.81%), Postives = 72/161 (44.72%), Query Frame = 0 Query: 23 VEKCHYTYITQFSPSQE--EVCDENFEKSCQITFKQQAFNETIKKCYKPLEKVCNGQGPEECRTLYESSCTTKY-----VEKQP-----------GKFVGDTSCEKLPIEICG-AGCTTEEGPEECHDKTVTSLVDIPEEICDLNPQKTCRFQTKLVPRLK 164 V+ C I + SP + +VC +E C+ +K + KC + C E +SS + EK P K +TSC K P EIC + C T+ G E CH+++ T + ++PEE CDL P++ C Q+ LVPR + Sbjct: 683 VKVCRTPLIKKCSPGTKGPQVCTTQYENVCETKYKSYELQQDEPKCKMVEQLRCRNISVELFHIPTDSSSAQPFGIKEKCEKWPVQKCELNRETVKKVHPETSCRKAPREICAPSNCVTKPGKEICHEESRTHIQNVPEEDCDLQPEENCHLQSSLVPRFQ 843 HSP 4 Score: 50.0618 bits (118), Expect = 4.161e-7 Identity = 22/40 (55.00%), Postives = 28/40 (70.00%), Query Frame = 0 Query: 16 LECTHKNVEKCHYTYITQFSPSQEEVCDENFEKSCQITFK 55 +EC H +KCH TYIT +S S E+ CD +F K C+ITFK Sbjct: 900 MECHHTFNKKCHITYITDYSSSAEKKCDTDFRKKCRITFK 939
BLAST of EMLSAG00000004810 vs. L. salmonis peptides
Match: EMLSAP00000012593 (pep:novel supercontig:LSalAtl2s:LSalAtl2s943:1629:2636:-1 gene:EMLSAG00000012593 transcript:EMLSAT00000012593 description:"maker-LSalAtl2s943-augustus-gene-0.7") HSP 1 Score: 92.8189 bits (229), Expect = 3.727e-22 Identity = 66/212 (31.13%), Postives = 92/212 (43.40%), Query Frame = 0 Query: 16 LECTHKNVEKCHYTYITQFSPSQEEVCDENFEKSCQITFKQQAFNETIKKCYKPLEKVCNG--QGPEECRTLYESSCTTKY------------------------VEKQPGKFVGDTS---------------CEKLPIEICG-------------------------AGCTTEEGPEECHDKTVTSLVDIPEEICDLNPQKTCRFQTKLVP 161 +EC H +KCH TYIT +S + E+ CD NF+K+C I FK NE +K C+ P+ K C +GPE C T YE+ C TK+ VE D + CEK P++ C + C T+ G E CH+++ T + +IPEE CDL P + CR ++ LVP Sbjct: 83 MECQHTFRKKCHLTYITDYSSAPEKKCDTNFKKNCHIIFKPVPHNEKVKICHTPIVKECGDEIEGPEVCSTEYETHCETKFRTYELEQDEPECNMVEELRCSNQTVELLHIAHSDDDANSGSNSGIPYXVKEKCEKWPVQKCKLVKKSVKKIHPESECKKVPLNVCRPSNCKTKAGDEICHEESRTQIQNIPEEECDLQPIENCRMESSLVP 294
BLAST of EMLSAG00000004810 vs. L. salmonis peptides
Match: EMLSAP00000008645 (pep:novel supercontig:LSalAtl2s:LSalAtl2s534:20104:25933:1 gene:EMLSAG00000008645 transcript:EMLSAT00000008645 description:"maker-LSalAtl2s534-augustus-gene-0.6") HSP 1 Score: 93.9745 bits (232), Expect = 1.687e-21 Identity = 60/208 (28.85%), Postives = 94/208 (45.19%), Query Frame = 0 Query: 16 LECTHKNVEKCHYTYITQFSPSQEEVCDENFEKSCQITFKQQAFNETIKKCYKPLEKVCNG--QGPEECRTLYESSCTTKY-----------------------------VEKQ-----PGKFVGDTSCEKLPIEICGAGCTTE-------------------------EGPEECHDKTVTSLVDIPEEICDLNPQKTCRFQTKLVPR 162 ++C H +KCH TYIT ++ + ++ C+ F+K+C ITFK F E + C+ P+ + C QGP+ C T YE +C TKY +E++ P F CE+ P++ C TT +G E CH+++ T + ++PEE CDL P++ CR ++ LVPR Sbjct: 182 MKCHHSYQKKCHMTYITDYASTTQKKCETTFKKNCHITFKPTPFTEKVDICHTPIVRECGNETQGPDICTTQYEDNCETKYKTYELEQDEPKCEMVEETRCKNVTVELFHIEQEEGAEGPSPFAVREKCEQWPVQKCELDTTTVKKVHPETSCRKIPREVCVPNNCRAIKGDEICHEESRTQVQNVPEEECDLQPEENCRMESALVPR 389
BLAST of EMLSAG00000004810 vs. nr
Match: gi|155966163|gb|ABU41036.1| (hypothetical protein [Lepeophtheirus salmonis]) HSP 1 Score: 156.762 bits (395), Expect = 5.184e-42 Identity = 99/240 (41.25%), Postives = 129/240 (53.75%), Query Frame = 0 Query: 1 MKKDETVSSIQKDPLLECTHKNVEKCHYTYITQFSPSQEEVCDENFEKSCQITFKQQAFNETIKKCYKPLEKVCNGQGPEECRTLYESSCTTKYVE-------------------------------------------KQPGKFVGDTSCEKLPIEICG-AGCTTEEGPEECHDKTVTSLVDIPEEICDLNPQKTCRFQTKLVPRLKPAHECTTIPQETXNLKFTQPRKVDKPLKTKWC 196 + K V + D +EC H E+CH TY T F P QEE C+ENF+KSC I +K+ A +ET+K C+ PL VC G+GPEEC+T+YES C TKY E K K+ T C+K+P ++CG +GC + GPEEC DK T + ++PEE C+L PQK+C+ TKLVP LKP EC IP+E + PRKV KP+ KWC Sbjct: 96 IDKVVMVEETEYDDHIECHHSYSERCHTTYTTDFEPQQEEECEENFKKSCFIEYKKVAVDETVKFCHTPL--VCEGEGPEECKTVYESECETKYHEHDVEDDVVNCEXIQEEKCEDVTQGYTTEQKCTKWPKQVCTNEKKNVKKYSPQTECKKVPRQLCGPSGCVPQPGPEECFDKKETIVQEVPEENCNLEPQKSCKQVTKLVPSLKPVEECVDIPKEVCSRSRKNPRKVQKPVVKKWC 333
BLAST of EMLSAG00000004810 vs. nr
Match: gi|155966261|gb|ABU41084.1| (hypothetical protein [Lepeophtheirus salmonis]) HSP 1 Score: 156.377 bits (394), Expect = 9.872e-42 Identity = 99/240 (41.25%), Postives = 127/240 (52.92%), Query Frame = 0 Query: 1 MKKDETVSSIQKDPLLECTHKNVEKCHYTYITQFSPSQEEVCDENFEKSCQITFKQQAFNETIKKCYKPLEKVCNGQGPEECRTLYESSCTTKYVE-------------------------------------------KQPGKFVGDTSCEKLPIEICG-AGCTTEEGPEECHDKTVTSLVDIPEEICDLNPQKTCRFQTKLVPRLKPAHECTTIPQETXNLKFTQPRKVDKPLKTKWC 196 + K V + D +EC H E+CH TY T F P QEE C+ENF+KSC I +K+ A ET+K C+ PL VC G+GPEEC+T+YES C TKY E K K+ T C+K+P ++CG +GC + GPEEC DK T + ++PEE C+L PQK C+ TKLVP LKP EC IP+E + PRKV KP+ KWC Sbjct: 100 IDKVVMVEETEYDDHIECHHSYSERCHTTYTTDFEPQQEEECEENFKKSCFIEYKKVAVEETVKFCHTPL--VCEGEGPEECKTVYESECETKYHEHDVEDDVVNCETIQEEKCEDVTQGYTTEQKCTKWPKQVCTNEKKNVKKYSPQTECKKVPRQLCGPSGCVPQPGPEECFDKKETIVQEVPEENCNLEPQKACKQVTKLVPSLKPVEECVDIPKEVCSRSRKNPRKVQKPVVKKWC 337
BLAST of EMLSAG00000004810 vs. nr
Match: gi|155966212|gb|ABU41060.1| (hypothetical protein, partial [Lepeophtheirus salmonis]) HSP 1 Score: 122.865 bits (307), Expect = 1.317e-30 Identity = 73/187 (39.04%), Postives = 96/187 (51.34%), Query Frame = 0 Query: 54 FKQQAFNETIKKCYKPLEKVCNGQGPEECRTLYESSCTTKYVE-------------------------------------------KQPGKFVGDTSCEKLPIEICG-AGCTTEEGPEECHDKTVTSLVDIPEEICDLNPQKTCRFQTKLVPRLKPAHECTTIPQETXNLKFTQPRKVDKPLKTKWC 196 +K+ A +ET+K C+ PL VC G GPEEC+T+YES C TKY E K K+ T C+K+P ++CG +GC + GPEEC DK T + ++PEE C+L PQK C+ TKLVP LKP EC +P+E + PRKV KP+ KWC Sbjct: 1 YKKVAVDETVKFCHTPL--VCEGDGPEECKTVYESECETKYHEHDVEDDVVNCETIQEEKCEDVTQGYTTEQKCTKWPKQVCTSEKKNVKKYSPQTECKKVPRQLCGPSGCIPQPGPEECFDKKETIVQEVPEENCNLEPQKACKQVTKLVPSLKPVEECVDVPKEVCSRSRKNPRKVQKPVVKKWC 185
BLAST of EMLSAG00000004810 vs. nr
Match: gi|155966139|gb|ABU41024.1| (hypothetical protein [Lepeophtheirus salmonis]) HSP 1 Score: 112.464 bits (280), Expect = 1.257e-26 Identity = 67/171 (39.18%), Postives = 85/171 (49.71%), Query Frame = 0 Query: 70 LEKVCNGQGPEECRTLYESSCTTKYVE-------------------------------------------KQPGKFVGDTSCEKLPIEICG-AGCTTEEGPEECHDKTVTSLVDIPEEICDLNPQKTCRFQTKLVPRLKPAHECTTIPQETXNLKFTQPRKVDKPLKTKWC 196 L VC G+GPEEC+T+YES C TKY E K K+ T C+K+P ++CG +GC + GPEEC DK T + ++PEE C+L PQK C+ TKLVP LKP EC IP+E + PRKV KP+ KWC Sbjct: 9 LPLVCEGEGPEECKTVYESECETKYHEHDVEDDVVNCETIQEEKCEDVTQGYTTEQKCTKWPKQVCTNEKKNVKKYSPQTECKKVPRQLCGPSGCVPQPGPEECFDKKETIVQEVPEENCNLEPQKACKQVTKLVPSLKPVEECVDIPKEVCSRSRKNPRKVQKPVVKKWC 179
BLAST of EMLSAG00000004810 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold498_size154992-snap-gene-0.16 (protein:Tk05257 transcript:maker-scaffold498_size154992-snap-gene-0.16-mRNA-1 annotation:"hypothetical protein") HSP 1 Score: 93.5893 bits (231), Expect = 5.803e-22 Identity = 57/193 (29.53%), Postives = 96/193 (49.74%), Query Frame = 0 Query: 23 VEKCHYTYITQFSPSQEEVCDENFEKSCQITFKQQAFNETIKKCYKPLEKVCNGQGPEECRTLYESSCTTKYVEKQPGKFVGDTSCEKLPIEICG-AGCTTEEGPEECHDKTVTSLVDIPEEICDLNPQKTCRFQTKLVPRLKPAHECTTIPQETXNLKFTQPRKVDKPLKTKWCLDDTPPVPGETYDENNAL 214 VE CH + S EEVC + +E C + + + I +C +E+VC+ G +C + C+ ++ + +T C + ++CG C GP+ C + T + ++PEEIC LNPQK C +K+VPRL+ +C +P+E + + +KV +P KWC G T D+++A+ Sbjct: 142 VEVCHQPMVRNCSIQGEEVCSDEYETVCDTQYHENEVEDDIPQCETIVEEVCDAAG--KCTKVPRQECS--LMKMNSTRLTPETDCRQEVRQVCGPEACPLTRGPKICAQEVKTFVQEVPEEICHLNPQKVCSPVSKIVPRLELEVKCIDVPREVCSTVQVEAKKVQRPTVKKWC--GPTAAAGPTMDKHDAI 328
BLAST of EMLSAG00000004810 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold203_size261420-snap-gene-0.9 (protein:Tk10407 transcript:maker-scaffold203_size261420-snap-gene-0.9-mRNA-1 annotation:"hypothetical protein") HSP 1 Score: 90.1225 bits (222), Expect = 1.855e-20 Identity = 58/189 (30.69%), Postives = 91/189 (48.15%), Query Frame = 0 Query: 7 VSSIQKDPLLECTHKNVEKCHYTYITQFSPSQEEVCDENFEKSCQITFKQQAFNETIKKCYKPLEKVCNGQGPEECRTLYESSCTTKYVEK-------------------QPGKFVGDTSCEKLPIEICGA-GCTTEEGPEECHDKTVTSLVDIPEEICDLNPQKTCRFQTKLVPRLKPAHECTTIPQE 175 V IQ C H N E C TY T F S+ + C E F K C I ++ ++ I+ C +PL + C +G E C T +E+ C T + E + K + +T C + + +CG+ C +G C D+ T + ++P+E C LNP+KTC K++P+L+ EC +P+E Sbjct: 308 VEEIQYKDEERCIHINQEACSQTYQTVFKTSKIQDCKETFVKDCFIEYESVPKSQKIQICKEPLIRDCEIEGEETCSTEFETICETTFHEAKVEDEWPCGQRHQCRIEQVESTKLIPETDCHQKNMTVCGSESCPIVKGERVCTDELKTFVEEVPKERCHLNPKKTCNEVNKVIPKLELTTECIDVPKE 496
BLAST of EMLSAG00000004810 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold330_size203968-snap-gene-1.21 (protein:Tk05068 transcript:maker-scaffold330_size203968-snap-gene-1.21-mRNA-1 annotation:"---NA---") HSP 1 Score: 89.3521 bits (220), Expect = 3.055e-20 Identity = 67/206 (32.52%), Postives = 94/206 (45.63%), Query Frame = 0 Query: 18 CTHKNVEKCHYTYITQFSPSQEEVCDENFEKSCQITFK------------------QQAFNETIKKCYKPLEKVCNGQGPEECRTLYESSC-------------------TTKYVEKQPGKFVGDTSCEKLPIEICG-AGCTTEEGPEECHDKTVTSLVDIPEEICDLNPQKTCRFQTKLVPRLKPAHECTTIPQETXNLKFTQPR 185 C H E+CH T SP+ E C+ENF+KSC I ++ + NE +C + EC T+ E C K +K K+ +T C+K+ E+CG +GC + GPEEC DK T + ++PEE C+L PQ++C+ TKLVP LKP EC IP+E + PR Sbjct: 166 CHHSYSERCHTTTPPTLSPTGGE-CEENFKKSCFIEYRKVLEDPSPSATLPSSARARDPRNEDRLRCETRYHEHEVEDDVVECETIQEEKCEDVTQGYTTEQKCTKWPKQVCKNEKKTVKKYTPETECKKVGRELCGPSGCLLQPGPEECFDKKETVVQEVPEETCNLEPQRSCKHVTKLVPLLKPVEECVDIPKEVCSRSRKNPR 370
BLAST of EMLSAG00000004810 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold316_size209483-snap-gene-1.31 (protein:Tk05932 transcript:maker-scaffold316_size209483-snap-gene-1.31-mRNA-1 annotation:"hypothetical protein") HSP 1 Score: 86.2705 bits (212), Expect = 3.540e-19 Identity = 67/223 (30.04%), Postives = 101/223 (45.29%), Query Frame = 0 Query: 1 MKKDETVSSIQKDPLLECTHKNVEKCHYTYITQFSPSQEEVCDENFEKSCQITFKQQAFNETIKKCYKPLEKVCNGQ--GPEECRTLYESSCTTKY----VEKQPG--KFVGDTSCEKLPIEICGA-----GCTTEEGPEECHDKTVTS------------------------LVDIP----------EEICDLNPQKTCRFQTKLVPRLKPAHECTTIPQET 176 M+ +ETV D ++C H EKCH TYIT + + EE C+ F KSC ITFK FNET+ C+ P+ + C + GP+ C T YE++C T+Y VE+ + T CE + ++ GA G + G + D TS +VD P ++ C+ P + C + +LV ++ P +C IP+E Sbjct: 216 MQVEETVY----DRAIKCHHSYQEKCHLTYITDYRSTTEEKCETTFTKSCHITFKPMPFNETVNVCHTPVVRQCGTEPVGPDICSTHYETNCETRYKTYEVEQDEPVCRMEVMTKCENVTLDFNGASAERSGRQDDGGADPGADDEATSDPLTELVTIDPVNAPAPVTNAPDTVVDTPNAPNPAGITVDQRCEEWPVQKCTLEKRLVKKVHPDTQCRKIPREV 434 HSP 2 Score: 72.4034 bits (176), Expect = 1.803e-14 Identity = 34/97 (35.05%), Postives = 52/97 (53.61%), Query Frame = 0 Query: 101 KFVGDTSCEKLPIEICGAG-CTTEEGPEECHDKTVTSLVDIPEEICDLNPQKTCRFQTKLVPRLKPAHECTTIPQETXNLKFTQPRKVDKPLKTKWC 196 K DT C K+P E+C C + E C D+ + ++P+E C+L P++ C + LVPRL P + C +P+E PR+V KP+ +WC Sbjct: 420 KVHPDTQCRKIPREVCVPNNCALVQADEICRDEVRMQVQNVPQEECELQPEENCHMEAVLVPRLVPKNNCVKVPKEICVNTKKNPRRVKKPVIKEWC 516
BLAST of EMLSAG00000004810 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold4031_size6872-snap-gene-0.2 (protein:Tk11423 transcript:maker-scaffold4031_size6872-snap-gene-0.2-mRNA-1 annotation:"hypothetical protein") HSP 1 Score: 83.9593 bits (206), Expect = 7.794e-19 Identity = 60/221 (27.15%), Postives = 97/221 (43.89%), Query Frame = 0 Query: 7 VSSIQKDPLLECTHKNVEKCHYTYITQFSPSQEEVCDENFEKSCQITFKQQAFNETIKKCYKPLEKVCNGQGPEECRTLYESSCTTKYVEKQ-----------------------------PGKFVGDTSCEKLPIEICGA-GCTTEEGPEECHDKTVTSLVDIPEEICDLNPQKTCRFQTKLVPRLKPAHECTTIPQETXNLKFTQPRKVDKPLKTKWCL 197 V IQ C H N E C TY T F S+ + C E+F K C I ++ +E I+ C +PL + C+ G E C T +++ C T + E Q K + +T C + + +CG+ C + C D+ T + ++P+E C LNP+KTC K++P+L+ A C +P+E + + +V + C Sbjct: 92 VEEIQYKDEQRCIHINQESCSQTYETVFKTSKVQDCTESFVKDCFIEYESVPRSEKIQICKEPLIRDCDIDGEETCSTEFQTICETTFHEAQVTDDVAVCEMVDLLNGQGQRHQCRIEQVESTKLIPETDCHQKNMTVCGSESCPIVKAERVCIDELKTFVEEVPKERCHLNPKKTCSEVNKVIPKLEMASVCIDVPKELCEIVPVEAERVQVEVNRTVCF 312 The following BLAST results are available for this feature:
BLAST of EMLSAG00000004810 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000004810 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
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BLAST of EMLSAG00000004810 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 25
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BLAST of EMLSAG00000004810 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000004810 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000004810 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 4
BLAST of EMLSAG00000004810 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s2542:14622..15869+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000004810-687576 ID=EMLSAG00000004810-687576|Name=EMLSAG00000004810|organism=Lepeophtheirus salmonis|type=gene|length=1248bp|location=Sequence derived from alignment at LSalAtl2s2542:14622..15869+ (Lepeophtheirus salmonis)back to top Add to Basket
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