EMLSAG00000004933, EMLSAG00000004933-687699 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000004933
Unique NameEMLSAG00000004933-687699
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000004933 vs. C. finmarchicus
Match: gi|592888121|gb|GAXK01070254.1| (TSA: Calanus finmarchicus comp6083450_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 46.595 bits (109), Expect = 1.959e-6
Identity = 24/64 (37.50%), Postives = 41/64 (64.06%), Query Frame = 0 
Query:   12 DGSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWE--TEKVYMWSDSKTAL 73
            DG+  VK + +K+ VTP+   S PR ELNG ++   L+ +++ AL++E   +K+ +  DS+T L
Sbjct:   12 DGTVHVKLLCSKARVTPLLRISTPRSELNGAVVAVRLIWTVVQALEFERLPDKILIGGDSETVL 203
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BLAST of EMLSAG00000004933 vs. C. finmarchicus
Match: gi|592900826|gb|GAXK01057549.1| (TSA: Calanus finmarchicus comp5227961_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 45.8246 bits (107), Expect = 6.138e-6
Identity = 34/96 (35.42%), Postives = 46/96 (47.92%), Query Frame = 0 
Query:    3 LVCLFDG-----------DW---DGSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETE-KVYMWSDSKTALNWIRNDKDSF 83
            L+C FDG            W   DG+F+V  + AK+ V P+   S PRMEL G  + T +   II+AL  +   +V    DS+T L     DK  F
Sbjct:  251 LICYFDGADPAFCIAIYCRWNLDDGTFDVFLVAAKARVAPMLGTSTPRMELEGATMDTRVALRIIHALMEDPPGRVLFVGDSQTILASRERDKGFF 538
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BLAST of EMLSAG00000004933 vs. C. finmarchicus
Match: gi|592931300|gb|GAXK01027253.1| (TSA: Calanus finmarchicus comp5907114_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 43.1282 bits (100), Expect = 3.626e-5
Identity = 30/92 (32.61%), Postives = 50/92 (54.35%), Query Frame = 0 
Query:   12 DG-SFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQ---WETEKVYMWSDSK---TALNWIRNDKDSFKAHVSEIQETFSQ 96
            DG SF  +    K+ V P+R  ++PR EL  L +++ L+ +++ ALQ          M SDSK   +A++  R+    F+  V+E++E  SQ
Sbjct:    1 DGESFCARIALCKARVLPLRGLTVPRGELTALTLLSRLVLAVVLALQKLDTPPTSSIMLSDSKCSVSAVDSTRSLLPYFQNRVAEVRENMSQ 276
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BLAST of EMLSAG00000004933 vs. C. finmarchicus
Match: gi|592900672|gb|GAXK01057703.1| (TSA: Calanus finmarchicus comp8210739_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 39.6614 bits (91), Expect = 2.464e-4
Identity = 25/86 (29.07%), Postives = 43/86 (50.00%), Query Frame = 0 
Query:    3 LVCLFDGD-----------WD---GSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGL-MKSIINALQWETEKVYMWSDSKTAL 73
            L+C FDG            WD   GS  V  + +K+ V P+   S PR+E+NG  +++ + ++ ++  L     +V+   DS+T L
Sbjct:   71 LICFFDGSDCAFAIVIYARWDMEDGSVLVILLASKAKVGPMFATSTPRLEMNGATLVSRVALRVVVALLDDPPGQVFFLGDSETVL 328
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BLAST of EMLSAG00000004933 vs. C. finmarchicus
Match: gi|592879572|gb|GAXK01078329.1| (TSA: Calanus finmarchicus comp7958728_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 39.6614 bits (91), Expect = 3.520e-4
Identity = 26/99 (26.26%), Postives = 45/99 (45.45%), Query Frame = 0 
Query:    5 CLFDGDWDG--SFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETE---KVYMWSDSKTALNWIRNDKDS----FKAHVSEIQETF 94
            C  DG   G   ++     +K  V P+R  ++PR EL G L+++ LM +++ AL    E      M  DS+  ++ +          F+  ++EI E  
Sbjct:  143 CEHDGQCGGVGDYDANLCMSKCRVCPMRGYTVPRSELCGALLVSRLMLAVVTALCRLDEAPASAVMILDSRCVISALEMTSSKALPFFQNRLAEIHENL 439
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BLAST of EMLSAG00000004933 vs. C. finmarchicus
Match: gi|592884735|gb|GAXK01073640.1| (TSA: Calanus finmarchicus comp3167281_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 39.6614 bits (91), Expect = 1.062e-3
Identity = 22/79 (27.85%), Postives = 42/79 (53.16%), Query Frame = 0 
Query:   10 DWDGSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRNDKDSFKAHVS 88
            D +  + V  + AK+ VTP    S PR ELNG +++  L+ ++I  L  +  +V +  DS+  ++ + +   S  A+ +
Sbjct: 1743 DGERRWHVALLIAKARVTPAAGLSTPRSELNGFVVLGRLVDTVITCLPVKPCRVTLIGDSECTISALDSPTASLAAYFA 1979
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BLAST of EMLSAG00000004933 vs. C. finmarchicus
Match: gi|592833825|gb|GAXK01123719.1| (TSA: Calanus finmarchicus comp7894661_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 37.7354 bits (86), Expect = 1.242e-3
Identity = 21/59 (35.59%), Postives = 36/59 (61.02%), Query Frame = 0 
Query:   17 VKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWE--TEKVYMWSDSKTAL 73
            VK + +K+ V P++  S PR+ELNG +I   L+ +++ AL+ E    K  +  D++T L
Sbjct:  175 VKLLCSKARVAPLQRLSTPRVELNGAVIGVRLLWTVVQALEKEELPTKALIGGDAETVL 351
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BLAST of EMLSAG00000004933 vs. C. finmarchicus
Match: gi|592764891|gb|GAXK01189677.1| (TSA: Calanus finmarchicus comp6859890_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 37.3502 bits (85), Expect = 2.603e-3
Identity = 22/77 (28.57%), Postives = 41/77 (53.25%), Query Frame = 0 
Query:   26 VTPIRIKSIPRMELNGLLIMTGLMKSIINALQ---WETEKVYMWSDSKTALNWIRNDKDS---FKAHVSEIQETFSQ 96
            V P+R  ++PR EL  L +++ L+  ++ ALQ   +      M +DSK +L  ++  K     F+  V+E+++   Q
Sbjct:    5 VPPLRGMTVPRGELTALTLLSRLIMVVVIALQKMDYPPVSSIMLTDSKCSLCAVQTTKPLLPFFQNRVAEVRDNMDQ 235
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BLAST of EMLSAG00000004933 vs. C. finmarchicus
Match: gi|592805863|gb|GAXK01148705.1| (TSA: Calanus finmarchicus comp4024258_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 36.1946 bits (82), Expect = 9.427e-3
Identity = 24/69 (34.78%), Postives = 36/69 (52.17%), Query Frame = 0 
Query:   12 DGSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRNDK 80
            DGSF  K I  +S +   +  +IP++EL+G    T L   +  AL+  T      SDS  AL WI +++
Sbjct:  226 DGSFSCKLIIGRSMLA--KDTTIPKLELDGACSGTNLGWVVRTALKGWTVTYIQGSDSTIALCWITSEQ 426
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BLAST of EMLSAG00000004933 vs. C. finmarchicus
Match: gi|592895912|gb|GAXK01062463.1| (TSA: Calanus finmarchicus comp7818349_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 33.4982 bits (75), Expect = 4.551e-2
Identity = 13/42 (30.95%), Postives = 28/42 (66.67%), Query Frame = 0 
Query:   13 GSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIIN 54
            G   V+ + AK+ V+P +  S+P++E++GLL ++ L+  ++ 
Sbjct:  176 GEVVVRLVAAKARVSPSKGTSVPKVEVSGLLDLSRLLNVVVK 301
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BLAST of EMLSAG00000004933 vs. L. salmonis peptides
Match: EMLSAP00000004933 (pep:novel supercontig:LSalAtl2s:LSalAtl2s259:868481:870317:1 gene:EMLSAG00000004933 transcript:EMLSAT00000004933 description:"snap_masked-LSalAtl2s259-processed-gene-9.18")

HSP 1 Score: 247.669 bits (631), Expect = 1.872e-85
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0 
Query:    1 MELVCLFDGDWDGSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRNDKDSFKAHVSEIQETFSQELIANLPAMAQQLGQLPGIRMAK 119
            MELVCLFDGDWDGSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRNDKDSFKAHVSEIQETFSQELIANLPAMAQQLGQLPGIRMAK
Sbjct:    1 MELVCLFDGDWDGSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRNDKDSFKAHVSEIQETFSQELIANLPAMAQQLGQLPGIRMAK 119
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BLAST of EMLSAG00000004933 vs. L. salmonis peptides
Match: EMLSAP00000002171 (pep:novel supercontig:LSalAtl2s:LSalAtl2s13:1011691:1012373:-1 gene:EMLSAG00000002171 transcript:EMLSAT00000002171 description:"snap_masked-LSalAtl2s13-processed-gene-10.1")

HSP 1 Score: 132.109 bits (331), Expect = 3.871e-39
Identity = 63/71 (88.73%), Postives = 67/71 (94.37%), Query Frame = 0 
Query:   12 DGSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRNDKDS 82
            DGSFEV+FI AKSYVTPIRIKSIPR+ELNGLLIMT LMKSIINAL WET+KVYMWSDS TALNWIRN+KDS
Sbjct:   98 DGSFEVRFIAAKSYVTPIRIKSIPRIELNGLLIMTRLMKSIINALHWETKKVYMWSDSMTALNWIRNNKDS 168
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BLAST of EMLSAG00000004933 vs. L. salmonis peptides
Match: EMLSAP00000006685 (pep:novel supercontig:LSalAtl2s:LSalAtl2s371:275346:276006:1 gene:EMLSAG00000006685 transcript:EMLSAT00000006685 description:"maker-LSalAtl2s371-snap-gene-2.16")

HSP 1 Score: 115.161 bits (287), Expect = 7.019e-33
Identity = 55/63 (87.30%), Postives = 60/63 (95.24%), Query Frame = 0 
Query:   12 DGSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALN 74
            DGSFEV+FI AKSYVTPIRIKSIPR+ELNGLLIMT L+KSIINALQWETEK+Y+WSDSKT LN
Sbjct:  123 DGSFEVRFIAAKSYVTPIRIKSIPRIELNGLLIMTRLIKSIINALQWETEKLYIWSDSKTELN 185
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BLAST of EMLSAG00000004933 vs. L. salmonis peptides
Match: EMLSAP00000000503 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1079:67538:68036:1 gene:EMLSAG00000000503 transcript:EMLSAT00000000503 description:"maker-LSalAtl2s1079-snap-gene-0.28")

HSP 1 Score: 94.3597 bits (233), Expect = 2.902e-25
Identity = 52/88 (59.09%), Postives = 60/88 (68.18%), Query Frame = 0 
Query:   12 DGSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRNDKDSFKAHVSEIQETFSQELI 99
            DGSFEV+FI AKSYVTPIRIKSIPR+ELNGLLIMT LMK II  LQ ETEK ++                  +A +SEIQ+T+S EL 
Sbjct:   27 DGSFEVRFIAAKSYVTPIRIKSIPRIELNGLLIMTRLMKYIIYGLQCETEKAHV------------------QARLSEIQDTYSPELF 96
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BLAST of EMLSAG00000004933 vs. L. salmonis peptides
Match: EMLSAP00000008020 (pep:novel supercontig:LSalAtl2s:LSalAtl2s477:465728:466070:-1 gene:EMLSAG00000008020 transcript:EMLSAT00000008020 description:"snap_masked-LSalAtl2s477-processed-gene-3.22")

HSP 1 Score: 67.781 bits (164), Expect = 5.561e-16
Identity = 32/34 (94.12%), Postives = 32/34 (94.12%), Query Frame = 0 
Query:   45 MTGLMKSIINALQWETEKVYMWSDSKTALNWIRN 78
            MT LMKS INALQWETEKVYMWSDSKTALNWIRN
Sbjct:    1 MTRLMKSTINALQWETEKVYMWSDSKTALNWIRN 34
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BLAST of EMLSAG00000004933 vs. Select Arthropod Genomes
Match: gb|KFM82032.1| (hypothetical protein X975_09549, partial [Stegodyphus mimosarum])

HSP 1 Score: 62.7734 bits (151), Expect = 5.554e-13
Identity = 32/87 (36.78%), Postives = 51/87 (58.62%), Query Frame = 0 
Query:   13 GSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRNDKDSFKA----HVSEIQETFS 95
            G +  K + +KS V PI+  +IPR+EL+  L+++ LM+ ++ AL+ + + V +WSDS  AL WI       K      VS+IQ+  S
Sbjct:   28 GEYCSKLLCSKSRVAPIKTMTIPRLELSACLLLSKLMQKVLEALKLKIDDVKLWSDSSIALAWINTSPHLLKTFVSNRVSQIQQLTS 114
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BLAST of EMLSAG00000004933 vs. Select Arthropod Genomes
Match: gb|KFM77752.1| (hypothetical protein X975_01402, partial [Stegodyphus mimosarum])

HSP 1 Score: 60.8474 bits (146), Expect = 3.467e-11
Identity = 35/102 (34.31%), Postives = 54/102 (52.94%), Query Frame = 0 
Query:    9 GDWDGSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRNDKDSFKAHVSEIQETFSQELIANLPAM--AQQ 108
             D  G   V+ I +KS V P++  +IPR+EL   +++T L+K ++ AL+     VY WSDS   L WI+ +    K        TF Q  +A + ++  AQQ
Sbjct:  904 SDSSGRTLVRLITSKSRVAPLKSLTIPRLELCAAVLLTKLVKKVLTALKLAVTHVYYWSDSMIVLAWIQREPVDLK--------TFVQHRVATIQSLSSAQQ 997
[Close]
BLAST of EMLSAG00000004933 vs. Select Arthropod Genomes
Match: gb|KFM75076.1| (hypothetical protein X975_15167, partial [Stegodyphus mimosarum])

HSP 1 Score: 60.8474 bits (146), Expect = 3.880e-11
Identity = 29/74 (39.19%), Postives = 44/74 (59.46%), Query Frame = 0 
Query:    6 LFDGDWDGSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRND 79
            L    ++G   V+ +  KS V P +  ++PR+EL G LI T L + +I+AL+    +VY+WSDS   L WI+ D
Sbjct:  279 LLRAYFEGKASVQLVLCKSRVAPAKEVTVPRLELLGALIATRLYRQVIDALKLTKCQVYLWSDSSVDLTWIKKD 352
[Close]
BLAST of EMLSAG00000004933 vs. Select Arthropod Genomes
Match: gb|EFA13346.1| (hypothetical protein TcasGA2_TC002325 [Tribolium castaneum])

HSP 1 Score: 59.6918 bits (143), Expect = 8.816e-11
Identity = 31/86 (36.05%), Postives = 49/86 (56.98%), Query Frame = 0 
Query:    5 CLFDGDWD--GSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRNDKDSFKAHVS 88
            C++    D  G+  VK + +KS V P+++ +IPR+EL G L++  L+     +LQ    K Y W DSK  L+WI +D   ++  VS
Sbjct:  918 CIYCRSTDQLGNVSVKLLCSKSRVAPLKVLTIPRLELCGALLLARLINKAEESLQIIINKRYCWCDSKIVLSWIHSDPSRWRIFVS 1003
[Close]
BLAST of EMLSAG00000004933 vs. Select Arthropod Genomes
Match: gb|KFM61875.1| (Retrovirus-related Pol polyprotein from transposon 17.6, partial [Stegodyphus mimosarum])

HSP 1 Score: 57.7658 bits (138), Expect = 5.249e-10
Identity = 29/90 (32.22%), Postives = 53/90 (58.89%), Query Frame = 0 
Query:   12 DGSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRNDKDSFKA----HVSEIQETFSQE 97
            + +  VK + AK+ V P+++ +IPR+EL   +++  L++++  AL    + V+ WSDS+  L+W+R+D   ++      VSEIQ     E
Sbjct: 1761 NSTISVKLVTAKNCVPPLKLITIPRLELCAAVLLARLIQAVRAALVINFDSVHAWSDSQIVLSWLRSDPKKWQVFVSNRVSEIQTILPSE 1850
[Close]
BLAST of EMLSAG00000004933 vs. Select Arthropod Genomes
Match: gb|KFM63798.1| (hypothetical protein X975_18993, partial [Stegodyphus mimosarum])

HSP 1 Score: 57.3806 bits (137), Expect = 6.326e-10
Identity = 27/76 (35.53%), Postives = 46/76 (60.53%), Query Frame = 0 
Query:   13 GSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRNDKDSFKAHVS 88
            G   ++   +KS V+PI+  SIPR+EL   +++  LM  +I+AL+     V++WSDS T L+W++ +    K  V+
Sbjct:  591 GEVIIRLATSKSRVSPIKRGSIPRLELWAAVLLAKLMNRVISALKLNINNVFLWSDSMTVLSWLQKEPCCMKTFVA 666
[Close]
BLAST of EMLSAG00000004933 vs. Select Arthropod Genomes
Match: gb|KXZ75531.1| (hypothetical protein TcasGA2_TC033491 [Tribolium castaneum])

HSP 1 Score: 54.299 bits (129), Expect = 7.177e-9
Identity = 30/79 (37.97%), Postives = 43/79 (54.43%), Query Frame = 0 
Query:   17 VKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRNDKDSFKA----HVSEIQ 91
             K + AKS V P+   S+PR+EL G LI+  L   +I+++    E  Y+W DS   LNW+ +    +K      VSEIQ
Sbjct: 1945 TKLLCAKSKVAPLHNLSLPRLELCGALILARLFDKVISSMDVNFEGHYLWCDSTIVLNWLNSPPSRWKTFIANRVSEIQ 2023
[Close]
BLAST of EMLSAG00000004933 vs. Select Arthropod Genomes
Match: gb|KFM67396.1| (Transposable element Tc1 transposase, partial [Stegodyphus mimosarum])

HSP 1 Score: 53.5286 bits (127), Expect = 1.278e-8
Identity = 20/67 (29.85%), Postives = 41/67 (61.19%), Query Frame = 0 
Query:   13 GSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRND 79
             S +V  + +K+ V P++ +S+PR+EL   L++T L   +++ ++     +Y W+DS+  L WI ++
Sbjct:   27 SSVKVSLLTSKTRVAPLKTQSLPRLELCAALLLTNLSHVVVSCIELPINNIYAWTDSRVTLAWISSE 93
[Close]
BLAST of EMLSAG00000004933 vs. Select Arthropod Genomes
Match: gb|KFM59784.1| (hypothetical protein X975_08509, partial [Stegodyphus mimosarum])

HSP 1 Score: 53.5286 bits (127), Expect = 1.488e-8
Identity = 28/65 (43.08%), Postives = 37/65 (56.92%), Query Frame = 0 
Query:   17 VKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRNDKD 81
            ++ I AKS V P++  +IPR+EL    I   L+ SI  AL     K+  WSDS  AL WI+N  D
Sbjct:  850 IRLIRAKSRVAPLKTLTIPRLELMACCIGARLVHSIYAALDLPVLKIIAWSDSMVALWWIKNRGD 914
[Close]
BLAST of EMLSAG00000004933 vs. Select Arthropod Genomes
Match: gb|KFM68396.1| (hypothetical protein X975_24834, partial [Stegodyphus mimosarum])

HSP 1 Score: 53.5286 bits (127), Expect = 1.641e-8
Identity = 33/91 (36.26%), Postives = 48/91 (52.75%), Query Frame = 0 
Query:   17 VKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRNDKD--SFKAH-VSEIQETFSQELIANLPA 104
            ++ I AKS V P++  +IPR+EL    I   L+ SI  AL     K+  WSDS  AL WI+N  D   F A+ ++EI      +   ++P 
Sbjct:  369 IRLIRAKSRVAPLKTLTIPRLELMACCIGARLVHSIYAALDLPVLKIIAWSDSMVALWWIKNRGDWSVFVANRINEINSLIPSQFWRHVPG 459
[Close]
BLAST of EMLSAG00000004933 vs. nr
Match: gi|1048010271|ref|XP_017465954.1| (PREDICTED: uncharacterized protein LOC108358937 [Rhagoletis zephyria])

HSP 1 Score: 67.0106 bits (162), Expect = 1.214e-10
Identity = 34/85 (40.00%), Postives = 50/85 (58.82%), Query Frame = 0 
Query:   12 DGSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRNDKDSFKAHV----SEIQE 92
            D    V  + AK+ V PI+  ++P +ELNG L+ + L   +I  +Q    K+Y WSDSKT L+WIR+    +K +V    S+IQE
Sbjct: 1069 DSVCRVTILTAKTKVVPIKKITVPCLELNGALLASKLAAKLIETMQLPLSKIYCWSDSKTTLSWIRSRPGQYKQYVSNRISQIQE 1153
[Close]
BLAST of EMLSAG00000004933 vs. nr
Match: gi|909565385|ref|XP_013138000.1| (PREDICTED: uncharacterized protein LOC106102927 [Papilio polytes])

HSP 1 Score: 67.0106 bits (162), Expect = 1.222e-10
Identity = 34/90 (37.78%), Postives = 53/90 (58.89%), Query Frame = 0 
Query:   12 DGSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRNDKDSFKAHVS----EIQETFSQE 97
            +GS  +  + AK+ V PI+ +SIPR+EL   LI   L  +I    + + +KV +W+DS+T L+WIRND   +  +V+    EI E  + E
Sbjct:  121 NGSIRITLVGAKAKVAPIKTQSIPRLELQASLIGARLADAIQTEHRVKADKVLLWTDSQTVLHWIRNDTSRYSPYVAHRLGEIAERTTPE 210
[Close]
BLAST of EMLSAG00000004933 vs. nr
Match: gi|1059874122|ref|XP_017792102.1| (PREDICTED: uncharacterized protein LOC108574096 [Habropoda laboriosa])

HSP 1 Score: 67.0106 bits (162), Expect = 1.278e-10
Identity = 34/97 (35.05%), Postives = 55/97 (56.70%), Query Frame = 0 
Query:   12 DGSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRNDKDSFKA----HVSEIQETFSQELIANLPA 104
            DG++    + +KS V P++ +S+PR+EL   L++  L K    AL+   EK Y W+DS   L+WI +   + K      VSEIQ+  + EL  ++P+
Sbjct:  972 DGNYYTSLVCSKSRVAPLKTQSLPRLELCAALVLINLYKITSKALRIPIEKTYFWTDSMIVLHWINSQPHTLKQFVGNRVSEIQQHSNAELWRHVPS 1068
[Close]
BLAST of EMLSAG00000004933 vs. nr
Match: gi|1070617251|ref|XP_018397196.1| (PREDICTED: uncharacterized protein LOC108775361 [Cyphomyrmex costatus])

HSP 1 Score: 67.0106 bits (162), Expect = 1.512e-10
Identity = 28/67 (41.79%), Postives = 45/67 (67.16%), Query Frame = 0 
Query:   12 DGSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRN 78
            DGS EV+ + +KS V P++  SIPR+EL G L++  L K ++N+L +  +  Y+W+DS   L W+R+
Sbjct: 1079 DGSIEVQLLCSKSRVAPLKTLSIPRLELCGALLLAQLTKRVLNSLPFTVDATYLWTDSSIVLCWLRS 1145
[Close]
BLAST of EMLSAG00000004933 vs. nr
Match: gi|1059878151|ref|XP_017794325.1| (PREDICTED: uncharacterized protein LOC108575903 [Habropoda laboriosa])

HSP 1 Score: 66.6254 bits (161), Expect = 1.817e-10
Identity = 34/97 (35.05%), Postives = 55/97 (56.70%), Query Frame = 0 
Query:   12 DGSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRNDKDSFKA----HVSEIQETFSQELIANLPA 104
            DG++    + +KS V P++ +S+PR+EL   L++  L K    AL+   EK Y W+DS   L+WI +   + K      VSEIQ+  + EL  ++P+
Sbjct: 1067 DGNYYTSLVCSKSRVAPLKTQSLPRLELCAALLLINLYKITSKALRIPIEKTYFWTDSMIVLHWINSQPHTLKQFVGNRVSEIQQHSNAELWRHVPS 1163
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BLAST of EMLSAG00000004933 vs. nr
Match: gi|1110877094|ref|XP_019211714.1| (PREDICTED: uncharacterized protein LOC106097744 [Oreochromis niloticus])

HSP 1 Score: 66.6254 bits (161), Expect = 2.145e-10
Identity = 35/85 (41.18%), Postives = 50/85 (58.82%), Query Frame = 0 
Query:   12 DGSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRNDKDSFK----AHVSEIQE 92
            DG   + F+ A+S V P RI SIPR+EL G L    L + + N L  + +++ +WSDS T L W+R++   FK      V+EIQE
Sbjct: 1225 DGRSHLAFLMARSRVAPKRILSIPRLELCGALSGAHLSRLLRNELTLDIKRIVLWSDSTTVLTWLRSESCHFKVFVGTRVAEIQE 1309
[Close]
BLAST of EMLSAG00000004933 vs. nr
Match: gi|1048054453|ref|XP_017481310.1| (PREDICTED: uncharacterized protein LOC108370493 [Rhagoletis zephyria])

HSP 1 Score: 66.2402 bits (160), Expect = 2.197e-10
Identity = 35/99 (35.35%), Postives = 54/99 (54.55%), Query Frame = 0 
Query:    5 CLFDGDWDGSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRNDKDSFKAHVSEIQETFSQELIANLP 103
            C F G  D +F +  + AK+ V P++  S+PR+EL G L++T LMK+I+N L  ++   Y W DS   L+W+       K  V    E  + E++  LP
Sbjct: 1012 CRFKGP-DNTFTISLMAAKTRVAPLKQISLPRLELCGALLLTRLMKTILNVLPHKSITTYAWCDSTVVLSWLSQPPVRLKTFV----ENRTAEILETLP 1105
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BLAST of EMLSAG00000004933 vs. nr
Match: gi|1101620876|ref|XP_018974141.1| (PREDICTED: uncharacterized protein LOC109105245 [Cyprinus carpio])

HSP 1 Score: 66.2402 bits (160), Expect = 2.282e-10
Identity = 35/84 (41.67%), Postives = 48/84 (57.14%), Query Frame = 0 
Query:   13 GSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRNDKDSFK----AHVSEIQE 92
            G  EV FI A+S V+P R +S+PR+EL   L    L K + N L  E    ++WSDS T L W++++   FK      V+EIQE
Sbjct:  108 GQVEVAFIHARSRVSPKRQQSMPRLELCAALTGAQLAKILHNELSLEIRNTFLWSDSTTVLTWLKSESCRFKVFVGTRVTEIQE 191
[Close]
BLAST of EMLSAG00000004933 vs. nr
Match: gi|939685252|ref|XP_014299954.1| (PREDICTED: uncharacterized protein LOC106694171 [Microplitis demolitor])

HSP 1 Score: 65.4698 bits (158), Expect = 2.440e-10
Identity = 41/114 (35.96%), Postives = 59/114 (51.75%), Query Frame = 0 
Query:   10 DWDGSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRNDKDSFKAHVS----EIQETFSQ---ELIANL--PAMAQQLGQLPG 114
            D D    VK I +KS V P+ + S+PR+EL G L++  L  ++  AL    +++++WSDS  AL+W+       K  VS    EIQ   S      +A+L  PA     GQLP 
Sbjct:   22 DQDDKIHVKLICSKSRVAPVSLISLPRLELCGALLLARLFHTVKQALLINIDEIFLWSDSTIALHWLNTPPHRLKTFVSNRVAEIQRLTSACHWRHVASLDNPADLVSRGQLPS 135
[Close]
BLAST of EMLSAG00000004933 vs. nr
Match: gi|675389135|gb|KFM82032.1| (hypothetical protein X975_09549, partial [Stegodyphus mimosarum])

HSP 1 Score: 62.7734 bits (151), Expect = 2.717e-10
Identity = 32/87 (36.78%), Postives = 51/87 (58.62%), Query Frame = 0 
Query:   13 GSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRNDKDSFKA----HVSEIQETFS 95
            G +  K + +KS V PI+  +IPR+EL+  L+++ LM+ ++ AL+ + + V +WSDS  AL WI       K      VS+IQ+  S
Sbjct:   28 GEYCSKLLCSKSRVAPIKTMTIPRLELSACLLLSKLMQKVLEALKLKIDDVKLWSDSSIALAWINTSPHLLKTFVSNRVSQIQQLTS 114
The following BLAST results are available for this feature:
BLAST of EMLSAG00000004933 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000004933 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 19
Match NameE-valueIdentityDescription
gi|592888121|gb|GAXK01070254.1|1.959e-637.50TSA: Calanus finmarchicus comp6083450_c0_seq1 tran... [more]
gi|592900826|gb|GAXK01057549.1|6.138e-635.42TSA: Calanus finmarchicus comp5227961_c0_seq1 tran... [more]
gi|592931300|gb|GAXK01027253.1|3.626e-532.61TSA: Calanus finmarchicus comp5907114_c0_seq1 tran... [more]
gi|592900672|gb|GAXK01057703.1|2.464e-429.07TSA: Calanus finmarchicus comp8210739_c0_seq1 tran... [more]
gi|592879572|gb|GAXK01078329.1|3.520e-426.26TSA: Calanus finmarchicus comp7958728_c0_seq1 tran... [more]
gi|592884735|gb|GAXK01073640.1|1.062e-327.85TSA: Calanus finmarchicus comp3167281_c0_seq1 tran... [more]
gi|592833825|gb|GAXK01123719.1|1.242e-335.59TSA: Calanus finmarchicus comp7894661_c0_seq1 tran... [more]
gi|592764891|gb|GAXK01189677.1|2.603e-328.57TSA: Calanus finmarchicus comp6859890_c0_seq1 tran... [more]
gi|592805863|gb|GAXK01148705.1|9.427e-334.78TSA: Calanus finmarchicus comp4024258_c0_seq1 tran... [more]
gi|592895912|gb|GAXK01062463.1|4.551e-230.95TSA: Calanus finmarchicus comp7818349_c0_seq1 tran... [more]

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BLAST of EMLSAG00000004933 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 5
Match NameE-valueIdentityDescription
EMLSAP000000049331.872e-85100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s259:86848... [more]
EMLSAP000000021713.871e-3988.73pep:novel supercontig:LSalAtl2s:LSalAtl2s13:101169... [more]
EMLSAP000000066857.019e-3387.30pep:novel supercontig:LSalAtl2s:LSalAtl2s371:27534... [more]
EMLSAP000000005032.902e-2559.09pep:novel supercontig:LSalAtl2s:LSalAtl2s1079:6753... [more]
EMLSAP000000080205.561e-1694.12pep:novel supercontig:LSalAtl2s:LSalAtl2s477:46572... [more]
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BLAST of EMLSAG00000004933 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000004933 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 15
Match NameE-valueIdentityDescription
gb|KFM82032.1|5.554e-1336.78hypothetical protein X975_09549, partial [Stegodyp... [more]
gb|KFM77752.1|3.467e-1134.31hypothetical protein X975_01402, partial [Stegodyp... [more]
gb|KFM75076.1|3.880e-1139.19hypothetical protein X975_15167, partial [Stegodyp... [more]
gb|EFA13346.1|8.816e-1136.05hypothetical protein TcasGA2_TC002325 [Tribolium c... [more]
gb|KFM61875.1|5.249e-1032.22Retrovirus-related Pol polyprotein from transposon... [more]
gb|KFM63798.1|6.326e-1035.53hypothetical protein X975_18993, partial [Stegodyp... [more]
gb|KXZ75531.1|7.177e-937.97hypothetical protein TcasGA2_TC033491 [Tribolium c... [more]
gb|KFM67396.1|1.278e-829.85Transposable element Tc1 transposase, partial [Ste... [more]
gb|KFM59784.1|1.488e-843.08hypothetical protein X975_08509, partial [Stegodyp... [more]
gb|KFM68396.1|1.641e-836.26hypothetical protein X975_24834, partial [Stegodyp... [more]

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BLAST of EMLSAG00000004933 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25
Match NameE-valueIdentityDescription
gi|1048010271|ref|XP_017465954.1|1.214e-1040.00PREDICTED: uncharacterized protein LOC108358937 [R... [more]
gi|909565385|ref|XP_013138000.1|1.222e-1037.78PREDICTED: uncharacterized protein LOC106102927 [P... [more]
gi|1059874122|ref|XP_017792102.1|1.278e-1035.05PREDICTED: uncharacterized protein LOC108574096 [H... [more]
gi|1070617251|ref|XP_018397196.1|1.512e-1041.79PREDICTED: uncharacterized protein LOC108775361 [C... [more]
gi|1059878151|ref|XP_017794325.1|1.817e-1035.05PREDICTED: uncharacterized protein LOC108575903 [H... [more]
gi|1110877094|ref|XP_019211714.1|2.145e-1041.18PREDICTED: uncharacterized protein LOC106097744 [O... [more]
gi|1048054453|ref|XP_017481310.1|2.197e-1035.35PREDICTED: uncharacterized protein LOC108370493 [R... [more]
gi|1101620876|ref|XP_018974141.1|2.282e-1041.67PREDICTED: uncharacterized protein LOC109105245 [C... [more]
gi|939685252|ref|XP_014299954.1|2.440e-1035.96PREDICTED: uncharacterized protein LOC106694171 [M... [more]
gi|675389135|gb|KFM82032.1|2.717e-1036.78hypothetical protein X975_09549, partial [Stegodyp... [more]

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BLAST of EMLSAG00000004933 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s259supercontigLSalAtl2s259:868481..870317 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionsnap_masked-LSalAtl2s259-processed-gene-9.18
Biotypeprotein_coding
EvidenceIEA
NotePREDICTED: uncharacterized protein LOC106711682 [Papilio machaon]
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000004933 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000004933EMLSAT00000004933-700780Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s259:868481..870317+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000004933-687699 ID=EMLSAG00000004933-687699|Name=EMLSAG00000004933|organism=Lepeophtheirus salmonis|type=gene|length=1837bp|location=Sequence derived from alignment at LSalAtl2s259:868481..870317+ (Lepeophtheirus salmonis)
ATGGAGCTTGTGTGTTTGTTCGATGGAGACTGGGACGGAAGTTTTGAAGT
CAAGTTTATAGAGGCAAAGTCTTACGTAACTCCTATTCGAATCAAAAGCA
TACCTAGAATGGAACTAAATGGATTATTGATCATGACAGGACTGATGAAG
TCTATTATAAACGCGTTACAATGGGAAACAGAAAAGGTTTATATGTGGAG
TGATTCAAAAACAGCATTAAACTGGATTCGAAATGATAAAGACTCTTTTA
AGGCTCATGTGTCAGAGATTCAAGAGACTTTTTCGCAAGAATTGTTTTGT
TTCGTTCCAGGAAAGCAAAACCTGGCGGATGCTCTCACAAAACATACAGG
GAGCGGGGATCAAATTGTCGCCTATTTTAAACCTTGATAACTTGAAGACG
ACATTATCAAATAAAAAACCGGTTACCAAATAGGAAAGCTATTCATGTCA
GCTGACGATACGTAGTTAAGTTAGCATCATGCCGTCATCATATGAGGAGA
TAAAGAGCTATAATTGGAATGAGGAGCTTTCGAGGRCCGCCATAGTCATG
GCATTGCTTAATAATGGAAGTGAAACCTCCAATTCAACGATTGCTTCAAC
GTTAGGAGTGAATTTACGGACTGTTCCGCGTATCTGTAAGAAGCTAGAGG
ACACCTGGGATGTTGATGCCACTATAAAGAGGGCACCCAAGGAGGAGGGC
GCCGACAGGAAGGTCAGAGACACCGACTTTGTCGACAAGGTGAAGAAGAT
GGTTGAGGATGACCCTACCAGGTCAATGAAGGCCGGAGACAGGCCTTGGG
TGTGGCAACAGGACTCAGCACCCTGCCATGTGTCCAAAATATCCATGCAG
TGGTTAACCGAGAACTGTTATGACGTCGTAACCAAGGATTTGTGGCCTCC
GAACTCTCCCAAGCTTAATCCTTTGGACTATTTTGTCTGGGGCTATGTCG
AGAGACATACCAACAGACATCCCCATAGCACCAAGGCCAGCCTGATGGAC
TCCATCAAGGAGGTATTCGGCAACATGGACAATGAGATGGTCAGAAGAGC
CTGCGGCCGGTTCAGAGGTCGTATTGAGGCTGTTATTGATGCCAACGGTG
ATTATATCATATGAATGGCTACTCTATACCTATATGCTCYTCATNNNNNN
NNNNNNNNNNNTTTTKGGCGACAATTTGATCCCCGCTGCCTTTATAACCG
TTAATGACCTTAAATTGGCATCACAGTGAAGACTGGCCARAARAWCCCCA
AAATATCTATATGAATGTTCGTAACGATNMAGAAATCAAAAAGACTAAAC
GTATAGGAAGAAAATGTAGGGGAATATAAGAACATTTTTTATGGATTTTG
AAGAAGACTTAAGACTTTGGGATTAAAGTTAGAAGACAGTTTTTGTGTGG
AAAGATGTGCTTAATAAAGTACATAGAGAAGATAATATGGGAGCAAAATT
GAAGGTCGTTAGAGCCTTTTAAGGGAATGTGGATTTTAAGAAGAAATAAT
TTAGAAGGTTATGTCAGGKCTATGATGCAATAGACGAAGTTTATAGAGTT
GGTTGGCGTCTGAAGAAAATAGATTGAATGGCAAAAAAACAAAAATCGCC
TATGATTATTCCTGGAGGCATAGTTGCAAAATGTATCGTACAACATCACC
ATGAGAAGGTTTATCACGGGGAATCAAGACGAACACTGCATTTATTTTAC
TTGATGGGTTGTGGATAATTGGACTATCACGTATAGTATAGAAAGTTATA
AATACTTGTATCGATTGTAGAATTGCAAATCTACCCGCTATGGCTCAACA
GTTGGGACAATTACCTGGTATTCGTATGGCGAAATAA
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