EMLSAG00000004933, EMLSAG00000004933-687699 (gene) Lepeophtheirus salmonis

Overview


Name	EMLSAG00000004933
Unique Name	EMLSAG00000004933-687699
Type	gene
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of EMLSAG00000004933 vs. C. finmarchicus
Match: gi|592888121|gb|GAXK01070254.1| (TSA: Calanus finmarchicus comp6083450_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 46.595 bits (109), Expect = 1.959e-6
Identity = 24/64 (37.50%), Postives = 41/64 (64.06%), Query Frame = 0

Query:   12 DGSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWE--TEKVYMWSDSKTAL 73
            DG+  VK + +K+ VTP+   S PR ELNG ++   L+ +++ AL++E   +K+ +  DS+T L
Sbjct:   12 DGTVHVKLLCSKARVTPLLRISTPRSELNGAVVAVRLIWTVVQALEFERLPDKILIGGDSETVL 203

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BLAST of EMLSAG00000004933 vs. C. finmarchicus
Match: gi|592900826|gb|GAXK01057549.1| (TSA: Calanus finmarchicus comp5227961_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 45.8246 bits (107), Expect = 6.138e-6
Identity = 34/96 (35.42%), Postives = 46/96 (47.92%), Query Frame = 0

Query:    3 LVCLFDG-----------DW---DGSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETE-KVYMWSDSKTALNWIRNDKDSF 83
            L+C FDG            W   DG+F+V  + AK+ V P+   S PRMEL G  + T +   II+AL  +   +V    DS+T L     DK  F
Sbjct:  251 LICYFDGADPAFCIAIYCRWNLDDGTFDVFLVAAKARVAPMLGTSTPRMELEGATMDTRVALRIIHALMEDPPGRVLFVGDSQTILASRERDKGFF 538

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BLAST of EMLSAG00000004933 vs. C. finmarchicus
Match: gi|592931300|gb|GAXK01027253.1| (TSA: Calanus finmarchicus comp5907114_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 43.1282 bits (100), Expect = 3.626e-5
Identity = 30/92 (32.61%), Postives = 50/92 (54.35%), Query Frame = 0

Query:   12 DG-SFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQ---WETEKVYMWSDSK---TALNWIRNDKDSFKAHVSEIQETFSQ 96
            DG SF  +    K+ V P+R  ++PR EL  L +++ L+ +++ ALQ          M SDSK   +A++  R+    F+  V+E++E  SQ
Sbjct:    1 DGESFCARIALCKARVLPLRGLTVPRGELTALTLLSRLVLAVVLALQKLDTPPTSSIMLSDSKCSVSAVDSTRSLLPYFQNRVAEVRENMSQ 276

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BLAST of EMLSAG00000004933 vs. C. finmarchicus
Match: gi|592900672|gb|GAXK01057703.1| (TSA: Calanus finmarchicus comp8210739_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 39.6614 bits (91), Expect = 2.464e-4
Identity = 25/86 (29.07%), Postives = 43/86 (50.00%), Query Frame = 0

Query:    3 LVCLFDGD-----------WD---GSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGL-MKSIINALQWETEKVYMWSDSKTAL 73
            L+C FDG            WD   GS  V  + +K+ V P+   S PR+E+NG  +++ + ++ ++  L     +V+   DS+T L
Sbjct:   71 LICFFDGSDCAFAIVIYARWDMEDGSVLVILLASKAKVGPMFATSTPRLEMNGATLVSRVALRVVVALLDDPPGQVFFLGDSETVL 328

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BLAST of EMLSAG00000004933 vs. C. finmarchicus
Match: gi|592879572|gb|GAXK01078329.1| (TSA: Calanus finmarchicus comp7958728_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 39.6614 bits (91), Expect = 3.520e-4
Identity = 26/99 (26.26%), Postives = 45/99 (45.45%), Query Frame = 0

Query:    5 CLFDGDWDG--SFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETE---KVYMWSDSKTALNWIRNDKDS----FKAHVSEIQETF 94
            C  DG   G   ++     +K  V P+R  ++PR EL G L+++ LM +++ AL    E      M  DS+  ++ +          F+  ++EI E  
Sbjct:  143 CEHDGQCGGVGDYDANLCMSKCRVCPMRGYTVPRSELCGALLVSRLMLAVVTALCRLDEAPASAVMILDSRCVISALEMTSSKALPFFQNRLAEIHENL 439

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BLAST of EMLSAG00000004933 vs. C. finmarchicus
Match: gi|592884735|gb|GAXK01073640.1| (TSA: Calanus finmarchicus comp3167281_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 39.6614 bits (91), Expect = 1.062e-3
Identity = 22/79 (27.85%), Postives = 42/79 (53.16%), Query Frame = 0

Query:   10 DWDGSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRNDKDSFKAHVS 88
            D +  + V  + AK+ VTP    S PR ELNG +++  L+ ++I  L  +  +V +  DS+  ++ + +   S  A+ +
Sbjct: 1743 DGERRWHVALLIAKARVTPAAGLSTPRSELNGFVVLGRLVDTVITCLPVKPCRVTLIGDSECTISALDSPTASLAAYFA 1979

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BLAST of EMLSAG00000004933 vs. C. finmarchicus
Match: gi|592833825|gb|GAXK01123719.1| (TSA: Calanus finmarchicus comp7894661_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 37.7354 bits (86), Expect = 1.242e-3
Identity = 21/59 (35.59%), Postives = 36/59 (61.02%), Query Frame = 0

Query:   17 VKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWE--TEKVYMWSDSKTAL 73
            VK + +K+ V P++  S PR+ELNG +I   L+ +++ AL+ E    K  +  D++T L
Sbjct:  175 VKLLCSKARVAPLQRLSTPRVELNGAVIGVRLLWTVVQALEKEELPTKALIGGDAETVL 351

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BLAST of EMLSAG00000004933 vs. C. finmarchicus
Match: gi|592764891|gb|GAXK01189677.1| (TSA: Calanus finmarchicus comp6859890_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 37.3502 bits (85), Expect = 2.603e-3
Identity = 22/77 (28.57%), Postives = 41/77 (53.25%), Query Frame = 0

Query:   26 VTPIRIKSIPRMELNGLLIMTGLMKSIINALQ---WETEKVYMWSDSKTALNWIRNDKDS---FKAHVSEIQETFSQ 96
            V P+R  ++PR EL  L +++ L+  ++ ALQ   +      M +DSK +L  ++  K     F+  V+E+++   Q
Sbjct:    5 VPPLRGMTVPRGELTALTLLSRLIMVVVIALQKMDYPPVSSIMLTDSKCSLCAVQTTKPLLPFFQNRVAEVRDNMDQ 235

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BLAST of EMLSAG00000004933 vs. C. finmarchicus
Match: gi|592805863|gb|GAXK01148705.1| (TSA: Calanus finmarchicus comp4024258_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 36.1946 bits (82), Expect = 9.427e-3
Identity = 24/69 (34.78%), Postives = 36/69 (52.17%), Query Frame = 0

Query:   12 DGSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRNDK 80
            DGSF  K I  +S +   +  +IP++EL+G    T L   +  AL+  T      SDS  AL WI +++
Sbjct:  226 DGSFSCKLIIGRSMLA--KDTTIPKLELDGACSGTNLGWVVRTALKGWTVTYIQGSDSTIALCWITSEQ 426

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BLAST of EMLSAG00000004933 vs. C. finmarchicus
Match: gi|592895912|gb|GAXK01062463.1| (TSA: Calanus finmarchicus comp7818349_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 33.4982 bits (75), Expect = 4.551e-2
Identity = 13/42 (30.95%), Postives = 28/42 (66.67%), Query Frame = 0

Query:   13 GSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIIN 54
            G   V+ + AK+ V+P +  S+P++E++GLL ++ L+  ++ 
Sbjct:  176 GEVVVRLVAAKARVSPSKGTSVPKVEVSGLLDLSRLLNVVVK 301

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BLAST of EMLSAG00000004933 vs. L. salmonis peptides
Match: EMLSAP00000004933 (pep:novel supercontig:LSalAtl2s:LSalAtl2s259:868481:870317:1 gene:EMLSAG00000004933 transcript:EMLSAT00000004933 description:"snap_masked-LSalAtl2s259-processed-gene-9.18")

HSP 1 Score: 247.669 bits (631), Expect = 1.872e-85
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0

Query:    1 MELVCLFDGDWDGSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRNDKDSFKAHVSEIQETFSQELIANLPAMAQQLGQLPGIRMAK 119
            MELVCLFDGDWDGSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRNDKDSFKAHVSEIQETFSQELIANLPAMAQQLGQLPGIRMAK
Sbjct:    1 MELVCLFDGDWDGSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRNDKDSFKAHVSEIQETFSQELIANLPAMAQQLGQLPGIRMAK 119

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BLAST of EMLSAG00000004933 vs. L. salmonis peptides
Match: EMLSAP00000002171 (pep:novel supercontig:LSalAtl2s:LSalAtl2s13:1011691:1012373:-1 gene:EMLSAG00000002171 transcript:EMLSAT00000002171 description:"snap_masked-LSalAtl2s13-processed-gene-10.1")

HSP 1 Score: 132.109 bits (331), Expect = 3.871e-39
Identity = 63/71 (88.73%), Postives = 67/71 (94.37%), Query Frame = 0

Query:   12 DGSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRNDKDS 82
            DGSFEV+FI AKSYVTPIRIKSIPR+ELNGLLIMT LMKSIINAL WET+KVYMWSDS TALNWIRN+KDS
Sbjct:   98 DGSFEVRFIAAKSYVTPIRIKSIPRIELNGLLIMTRLMKSIINALHWETKKVYMWSDSMTALNWIRNNKDS 168

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BLAST of EMLSAG00000004933 vs. L. salmonis peptides
Match: EMLSAP00000006685 (pep:novel supercontig:LSalAtl2s:LSalAtl2s371:275346:276006:1 gene:EMLSAG00000006685 transcript:EMLSAT00000006685 description:"maker-LSalAtl2s371-snap-gene-2.16")

HSP 1 Score: 115.161 bits (287), Expect = 7.019e-33
Identity = 55/63 (87.30%), Postives = 60/63 (95.24%), Query Frame = 0

Query:   12 DGSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALN 74
            DGSFEV+FI AKSYVTPIRIKSIPR+ELNGLLIMT L+KSIINALQWETEK+Y+WSDSKT LN
Sbjct:  123 DGSFEVRFIAAKSYVTPIRIKSIPRIELNGLLIMTRLIKSIINALQWETEKLYIWSDSKTELN 185

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BLAST of EMLSAG00000004933 vs. L. salmonis peptides
Match: EMLSAP00000000503 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1079:67538:68036:1 gene:EMLSAG00000000503 transcript:EMLSAT00000000503 description:"maker-LSalAtl2s1079-snap-gene-0.28")

HSP 1 Score: 94.3597 bits (233), Expect = 2.902e-25
Identity = 52/88 (59.09%), Postives = 60/88 (68.18%), Query Frame = 0

Query:   12 DGSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRNDKDSFKAHVSEIQETFSQELI 99
            DGSFEV+FI AKSYVTPIRIKSIPR+ELNGLLIMT LMK II  LQ ETEK ++                  +A +SEIQ+T+S EL 
Sbjct:   27 DGSFEVRFIAAKSYVTPIRIKSIPRIELNGLLIMTRLMKYIIYGLQCETEKAHV------------------QARLSEIQDTYSPELF 96

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BLAST of EMLSAG00000004933 vs. L. salmonis peptides
Match: EMLSAP00000008020 (pep:novel supercontig:LSalAtl2s:LSalAtl2s477:465728:466070:-1 gene:EMLSAG00000008020 transcript:EMLSAT00000008020 description:"snap_masked-LSalAtl2s477-processed-gene-3.22")

HSP 1 Score: 67.781 bits (164), Expect = 5.561e-16
Identity = 32/34 (94.12%), Postives = 32/34 (94.12%), Query Frame = 0

Query:   45 MTGLMKSIINALQWETEKVYMWSDSKTALNWIRN 78
            MT LMKS INALQWETEKVYMWSDSKTALNWIRN
Sbjct:    1 MTRLMKSTINALQWETEKVYMWSDSKTALNWIRN 34

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BLAST of EMLSAG00000004933 vs. Select Arthropod Genomes
Match: gb|KFM74603.1| (putative RNA-directed DNA polymerase from transposon X-element, partial [Stegodyphus mimosarum])

HSP 1 Score: 53.1434 bits (126), Expect = 1.990e-8
Identity = 28/65 (43.08%), Postives = 37/65 (56.92%), Query Frame = 0

Query:   17 VKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRNDKD 81
            ++ I AKS V P++  +IPR+EL    I   L+ SI  AL     K+  WSDS  AL WI+N  D
Sbjct: 1060 IRLIRAKSRVAPLKTLTIPRLELMACCIGARLVHSIYAALDLPVLKIIAWSDSMVALWWIKNRGD 1124

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BLAST of EMLSAG00000004933 vs. Select Arthropod Genomes
Match: gb|EFA07702.1| (hypothetical protein TcasGA2_TC002178 [Tribolium castaneum])

HSP 1 Score: 53.1434 bits (126), Expect = 2.284e-8
Identity = 28/77 (36.36%), Postives = 45/77 (58.44%), Query Frame = 0

Query:   14 SFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQW--ETEKVYMWSDSKTALNWIRNDKDSFKAHVS 88
            + E++ I AKS V P++  SIPR+EL   +++  L+   +   +   E E+VY WSDS   L+WI++    +K  VS
Sbjct:  506 AIEIRLICAKSKVAPLKKISIPRLELCAAVLLAKLIDYTLTTFKGVIEIEQVYAWSDSTITLSWIQSPPHLWKVFVS 582

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BLAST of EMLSAG00000004933 vs. Select Arthropod Genomes
Match: gb|KFM63037.1| (hypothetical protein X975_02648, partial [Stegodyphus mimosarum])

HSP 1 Score: 50.8322 bits (120), Expect = 1.214e-7
Identity = 29/85 (34.12%), Postives = 46/85 (54.12%), Query Frame = 0

Query:   12 DGSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRNDKDSFKA----HVSEIQE 92
            +  FE  F+ AKS V P++  ++PR+EL G L+   +   + N L      V +WSDS+  L+WI++    +K      +SEI E
Sbjct: 1028 EHKFETTFVLAKSRVAPLKKLTLPRLELMGALVGARVANYLKNVLH--VSNVILWSDSEIVLHWIKSRAKKWKPFIANRISEIHE 1110

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BLAST of EMLSAG00000004933 vs. Select Arthropod Genomes
Match: gb|KFM71562.1| (Transposable element Tcb2 transposase, partial [Stegodyphus mimosarum])

HSP 1 Score: 50.447 bits (119), Expect = 1.842e-7
Identity = 23/76 (30.26%), Postives = 41/76 (53.95%), Query Frame = 0

Query:   13 GSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRNDKDSFKAHVS 88
            G  +  FI +K+ V P++  ++PR+EL G +    + K +        + VY W+DS+  L+WI+    ++K  VS
Sbjct: 1107 GEIKTSFILSKTRVAPLKSLTLPRLELMGAVTAARIAKYLTKLFNHICQHVYFWTDSQIVLHWIKGSSRNWKPFVS 1182

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BLAST of EMLSAG00000004933 vs. Select Arthropod Genomes
Match: gb|KFM62154.1| (hypothetical protein X975_06179, partial [Stegodyphus mimosarum])

HSP 1 Score: 49.2914 bits (116), Expect = 4.076e-7
Identity = 27/75 (36.00%), Postives = 44/75 (58.67%), Query Frame = 0

Query:   19 FIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRNDKDSFKAHV-SEIQE 92
            F+ +K+ V P++  ++PR+EL G L+   L  SI+  L+ +    + W+DSK  L WI++    FK  V + IQE
Sbjct: 1101 FVASKTRVAPLKPLTLPRLELMGALLSAKLGTSIVKVLKLQLS-CFFWTDSKVTLFWIKDCAKKFKLFVKNRIQE 1174

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BLAST of EMLSAG00000004933 vs. nr
Match: gi|943953313|ref|XP_014359544.1| (PREDICTED: uncharacterized protein LOC106711682 [Papilio machaon])

HSP 1 Score: 71.2478 bits (173), Expect = 4.437e-12
Identity = 36/86 (41.86%), Postives = 54/86 (62.79%), Query Frame = 0

Query:   12 DGSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRNDKDSFKAHV----SEIQET 93
            DGS +V    AKS VTP++  SIPR+EL   ++   L K++++   +  EK + WSDS+TAL WIR++   +K  V    +EI+ET
Sbjct:  118 DGSVQVALAAAKSRVTPLKPISIPRLELQAAVLGVRLAKTVLDEHDFPVEKKFYWSDSRTALTWIRSEPRVYKTFVAHRLAEIEET 203

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BLAST of EMLSAG00000004933 vs. nr
Match: gi|751241623|ref|XP_011174919.1| (PREDICTED: uncharacterized protein LOC105207181, partial [Solenopsis invicta])

HSP 1 Score: 70.0922 bits (170), Expect = 1.110e-11
Identity = 35/84 (41.67%), Postives = 55/84 (65.48%), Query Frame = 0

Query:   17 VKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRNDKD---SFKAH-VSEIQETFSQ 96
             + I AKS V PI+  S+PR+EL G L+++ LM+ ++NAL W+ E+ + W DS   L WI+ +     +F AH V+EIQ+T ++
Sbjct:  353 CQLICAKSRVAPIKKISLPRLELCGALLLSRLMEKVVNALTWQVEEKHYWCDSTVTLAWIKGEPSRSKTFVAHRVTEIQKTSTE 436

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BLAST of EMLSAG00000004933 vs. nr
Match: gi|751235481|ref|XP_011171523.1| (PREDICTED: uncharacterized protein LOC105204160 [Solenopsis invicta])

HSP 1 Score: 69.3218 bits (168), Expect = 1.431e-11
Identity = 37/98 (37.76%), Postives = 60/98 (61.22%), Query Frame = 0

Query:    5 CLF--DGDWDGSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRNDKD---SFKAH-VSEIQETFSQ 96
            CL+    + +     + I AKS V PI+  S+PR+EL G L+++ LM+ ++NAL W+ E+ + W DS   L WI+ +     +F AH V+EIQ+T ++
Sbjct:  115 CLYLRSTNSENQRTCQLICAKSRVAPIKKISLPRLELCGALLLSRLMEKVVNALTWQVEEKHYWCDSTVTLAWIKGEPSRWKTFVAHRVTEIQKTSTE 212

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BLAST of EMLSAG00000004933 vs. nr
Match: gi|1048039168|ref|XP_017476429.1| (PREDICTED: uncharacterized protein LOC108366518 [Rhagoletis zephyria])

HSP 1 Score: 69.3218 bits (168), Expect = 2.431e-11
Identity = 35/94 (37.23%), Postives = 55/94 (58.51%), Query Frame = 0

Query:    4 VCLFDGDWDGSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRNDKDSFKAHV----SEIQET 93
            V  F  +++  F    + AK+ V P+R  SIPR+EL   LI   L   ++N+ +   EK ++WSDSKT L+W++ D   ++ +V    +EIQET
Sbjct:  678 VSYFRIEYNSKFTTCLVAAKTKVAPLRPLSIPRLELQAALIGARLANMVVNSHKMHFEKRFIWSDSKTVLHWLQGDPRRYQQYVMFRIAEIQET 771

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BLAST of EMLSAG00000004933 vs. nr
Match: gi|1059214358|ref|XP_017763967.1| (PREDICTED: uncharacterized protein LOC108553538 [Eufriesea mexicana])

HSP 1 Score: 67.781 bits (164), Expect = 6.430e-11
Identity = 43/122 (35.25%), Postives = 65/122 (53.28%), Query Frame = 0

Query:    4 VCLF--DGDWDGSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRNDKDSFKA----HVSEIQETFSQE---LIANL--PAMAQQLGQLPG 114
             CL+    D DG    + I AKS V P+R  +IPR+EL   +++  L K++   L  E +K+ +WSDS   ++WI +   + K      V+EIQ + S +    +A+L  PA A   GQLP 
Sbjct: 1052 ACLYLRTTDLDGRTTSQLICAKSRVAPLRTITIPRLELCAAVLLVNLYKTVKGILNLEFDKIVLWSDSTIVIHWIGSAAHTLKTFVANRVAEIQNSTSAKEWRHVASLDNPADALSRGQLPS 1173

[Close]

BLAST of EMLSAG00000004933 vs. nr
Match: gi|930678942|gb|KPJ18861.1| (Retrotransposable element Tf2 155 kDa protein type 2 [Papilio machaon])

HSP 1 Score: 67.781 bits (164), Expect = 6.717e-11
Identity = 31/77 (40.26%), Postives = 48/77 (62.34%), Query Frame = 0

Query:   12 DGSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRNDKDSFKAHVS 88
            DGS E+  I +K+ VTP++  SIPR+EL   LI + L  +I ++ + +    + W+DS T L W+R+D  SFK  V+
Sbjct:  845 DGSIELSLISSKARVTPLKPTSIPRLELQAALIASRLAVTIKDSHRKQPTHTFFWTDSMTVLQWLRSDARSFKPFVA 921

[Close]

BLAST of EMLSAG00000004933 vs. nr
Match: gi|943938797|ref|XP_014371086.1| (PREDICTED: uncharacterized protein LOC106720812 [Papilio machaon])

HSP 1 Score: 67.781 bits (164), Expect = 6.754e-11
Identity = 31/77 (40.26%), Postives = 48/77 (62.34%), Query Frame = 0

Query:   12 DGSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRNDKDSFKAHVS 88
            DGS E+  I +K+ VTP++  SIPR+EL   LI + L  +I ++ + +    + W+DS T L W+R+D  SFK  V+
Sbjct: 1071 DGSIELSLISSKARVTPLKPTSIPRLELQAALIASRLAVTIKDSHRKQPTHTFFWTDSMTVLQWLRSDARSFKPFVA 1147

[Close]

BLAST of EMLSAG00000004933 vs. nr
Match: gi|1070144145|ref|XP_018377661.1| (PREDICTED: uncharacterized protein LOC108770524 [Trachymyrmex cornetzi])

HSP 1 Score: 67.781 bits (164), Expect = 7.176e-11
Identity = 36/89 (40.45%), Postives = 49/89 (55.06%), Query Frame = 0

Query:   12 DGSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRND----KDSFKAHVSEIQETFSQ 96
            DGS   K I +K+ V P++  +IPR+EL G +++T L+  II  L      VY+W+DS  +L WI N     KD     V  IQET  Q
Sbjct: 1055 DGSIHTKLICSKTKVAPLKRMTIPRLELAGAVLLTKLVNHIIKVLNRNYIPVYLWTDSTVSLTWISNHPSRWKDFVHNRVCYIQETVPQ 1143

[Close]

BLAST of EMLSAG00000004933 vs. nr
Match: gi|921142666|emb|CTR11689.1| (polyprotein [Calliphora vicina])

HSP 1 Score: 67.781 bits (164), Expect = 7.320e-11
Identity = 34/84 (40.48%), Postives = 51/84 (60.71%), Query Frame = 0

Query:    4 VCLFDGDWDGSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRNDKDSFKAHV 87
            V  F  ++ G  E+KFI AKS V P+R  S+PR+EL   +I T LM++ ++    + ++  MW+DSKT LNW + D   +K  V
Sbjct: 1217 VSYFRIEYAGKVEIKFIAAKSKVAPLRPISVPRLELQAAVIGTRLMRT-VSCHNLKLKRKLMWTDSKTVLNWFKGDPRKYKQFV 1299

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BLAST of EMLSAG00000004933 vs. nr
Match: gi|999973842|gb|KXJ13016.1| (hypothetical protein AC249_AIPGENE28172, partial [Exaiptasia pallida])

HSP 1 Score: 67.781 bits (164), Expect = 7.435e-11
Identity = 30/87 (34.48%), Postives = 51/87 (58.62%), Query Frame = 0

Query:   12 DGSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMKSIINALQWETEKVYMWSDSKTALNWIRNDKDSFK----AHVSEIQETF 94
            DG+ E K + ++S V P++  +IPR+EL+ L + T L  ++I+ L +E  K+Y W DS   L+WI    + ++     H+  +QE F
Sbjct:   78 DGTSETKLLXSRSRVAPLKKSTIPRLELDALCMPTKLALTLIDELDYEIAKIYFWVDSMVVLHWIHQPSNKYRDYVAHHIVAVQEDF 164

The following BLAST results are available for this feature:

BLAST of EMLSAG00000004933 vs. GO
BLAST of EMLSAG00000004933 vs. C. finmarchicus
BLAST of EMLSAG00000004933 vs. L. salmonis peptides
BLAST of EMLSAG00000004933 vs. SwissProt
BLAST of EMLSAG00000004933 vs. Select Arthropod Genomes
BLAST of EMLSAG00000004933 vs. nr
BLAST of EMLSAG00000004933 vs. Tigriopus kingsejongenis genes

BLAST of EMLSAG00000004933 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000004933 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 19


Match Name	E-value	Identity	Description
gi\|592888121\|gb\|GAXK01070254.1\|	1.959e-6	37.50	TSA: Calanus finmarchicus comp6083450_c0_seq1 tran...	[more]
gi\|592900826\|gb\|GAXK01057549.1\|	6.138e-6	35.42	TSA: Calanus finmarchicus comp5227961_c0_seq1 tran...	[more]
gi\|592931300\|gb\|GAXK01027253.1\|	3.626e-5	32.61	TSA: Calanus finmarchicus comp5907114_c0_seq1 tran...	[more]
gi\|592900672\|gb\|GAXK01057703.1\|	2.464e-4	29.07	TSA: Calanus finmarchicus comp8210739_c0_seq1 tran...	[more]
gi\|592879572\|gb\|GAXK01078329.1\|	3.520e-4	26.26	TSA: Calanus finmarchicus comp7958728_c0_seq1 tran...	[more]
gi\|592884735\|gb\|GAXK01073640.1\|	1.062e-3	27.85	TSA: Calanus finmarchicus comp3167281_c0_seq1 tran...	[more]
gi\|592833825\|gb\|GAXK01123719.1\|	1.242e-3	35.59	TSA: Calanus finmarchicus comp7894661_c0_seq1 tran...	[more]
gi\|592764891\|gb\|GAXK01189677.1\|	2.603e-3	28.57	TSA: Calanus finmarchicus comp6859890_c0_seq1 tran...	[more]
gi\|592805863\|gb\|GAXK01148705.1\|	9.427e-3	34.78	TSA: Calanus finmarchicus comp4024258_c0_seq1 tran...	[more]
gi\|592895912\|gb\|GAXK01062463.1\|	4.551e-2	30.95	TSA: Calanus finmarchicus comp7818349_c0_seq1 tran...	[more]

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BLAST of EMLSAG00000004933 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 5


Match Name	E-value	Identity	Description
EMLSAP00000004933	1.872e-85	100.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s259:86848...	[more]
EMLSAP00000002171	3.871e-39	88.73	pep:novel supercontig:LSalAtl2s:LSalAtl2s13:101169...	[more]
EMLSAP00000006685	7.019e-33	87.30	pep:novel supercontig:LSalAtl2s:LSalAtl2s371:27534...	[more]
EMLSAP00000000503	2.902e-25	59.09	pep:novel supercontig:LSalAtl2s:LSalAtl2s1079:6753...	[more]
EMLSAP00000008020	5.561e-16	94.12	pep:novel supercontig:LSalAtl2s:LSalAtl2s477:46572...	[more]

BLAST of EMLSAG00000004933 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000004933 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 15


Match Name	E-value	Identity	Description
gb\|KFM74603.1\|	1.990e-8	43.08	putative RNA-directed DNA polymerase from transpos...	[more]
gb\|EFA07702.1\|	2.284e-8	36.36	hypothetical protein TcasGA2_TC002178 [Tribolium c...	[more]
gb\|KFM63037.1\|	1.214e-7	34.12	hypothetical protein X975_02648, partial [Stegodyp...	[more]
gb\|KFM71562.1\|	1.842e-7	30.26	Transposable element Tcb2 transposase, partial [St...	[more]
gb\|KFM62154.1\|	4.076e-7	36.00	hypothetical protein X975_06179, partial [Stegodyp...	[more]

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BLAST of EMLSAG00000004933 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25


Match Name	E-value	Identity	Description
gi\|943953313\|ref\|XP_014359544.1\|	4.437e-12	41.86	PREDICTED: uncharacterized protein LOC106711682 [P...	[more]
gi\|751241623\|ref\|XP_011174919.1\|	1.110e-11	41.67	PREDICTED: uncharacterized protein LOC105207181, p...	[more]
gi\|751235481\|ref\|XP_011171523.1\|	1.431e-11	37.76	PREDICTED: uncharacterized protein LOC105204160 [S...	[more]
gi\|1048039168\|ref\|XP_017476429.1\|	2.431e-11	37.23	PREDICTED: uncharacterized protein LOC108366518 [R...	[more]
gi\|1059214358\|ref\|XP_017763967.1\|	6.430e-11	35.25	PREDICTED: uncharacterized protein LOC108553538 [E...	[more]
gi\|930678942\|gb\|KPJ18861.1\|	6.717e-11	40.26	Retrotransposable element Tf2 155 kDa protein type...	[more]
gi\|943938797\|ref\|XP_014371086.1\|	6.754e-11	40.26	PREDICTED: uncharacterized protein LOC106720812 [P...	[more]
gi\|1070144145\|ref\|XP_018377661.1\|	7.176e-11	40.45	PREDICTED: uncharacterized protein LOC108770524 [T...	[more]
gi\|921142666\|emb\|CTR11689.1\|	7.320e-11	40.48	polyprotein [Calliphora vicina]	[more]
gi\|999973842\|gb\|KXJ13016.1\|	7.435e-11	34.48	hypothetical protein AC249_AIPGENE28172, partial [...	[more]

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BLAST of EMLSAG00000004933 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0


Match Name	E-value	Identity	Description

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s259	supercontig	LSalAtl2s259:868481..870317 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016
Blast vs. GO	2014-04-02
TblastN vs C. finmarchicus TSA	2014-05-09
Blastp vs. self	2014-05-10
Blastp vs. SwissProt	2017-02-10
Blastp vs. Selected Arthropods	2017-02-20
Blastp vs. NR (2/2017)	2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins	2018-04-18

Properties


Property Name	Value
Logic name	ensemblgenomes
Description	snap_masked-LSalAtl2s259-processed-gene-9.18
Biotype	protein_coding
Evidence	IEA
Note	PREDICTED: uncharacterized protein LOC106711682 [Papilio machaon]

Cross References

External references for this gene


Database	Accession
Ensembl Metazoa (gene)	EMLSAG00000004933 (primary cross-reference)

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
EMLSAT00000004933	EMLSAT00000004933-700780	Lepeophtheirus salmonis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at LSalAtl2s259:868481..870317+

gene from alignment at LSalAtl2s259:868481..870317+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAG00000004933-687699 ID=EMLSAG00000004933-687699|Name=EMLSAG00000004933|organism=Lepeophtheirus salmonis|type=gene|length=1837bp|location=Sequence derived from alignment at LSalAtl2s259:868481..870317+ (Lepeophtheirus salmonis)
ATGGAGCTTGTGTGTTTGTTCGATGGAGACTGGGACGGAAGTTTTGAAGT
CAAGTTTATAGAGGCAAAGTCTTACGTAACTCCTATTCGAATCAAAAGCA
TACCTAGAATGGAACTAAATGGATTATTGATCATGACAGGACTGATGAAG
TCTATTATAAACGCGTTACAATGGGAAACAGAAAAGGTTTATATGTGGAG
TGATTCAAAAACAGCATTAAACTGGATTCGAAATGATAAAGACTCTTTTA
AGGCTCATGTGTCAGAGATTCAAGAGACTTTTTCGCAAGAATTGTTTTGT
TTCGTTCCAGGAAAGCAAAACCTGGCGGATGCTCTCACAAAACATACAGG
GAGCGGGGATCAAATTGTCGCCTATTTTAAACCTTGATAACTTGAAGACG
ACATTATCAAATAAAAAACCGGTTACCAAATAGGAAAGCTATTCATGTCA
GCTGACGATACGTAGTTAAGTTAGCATCATGCCGTCATCATATGAGGAGA
TAAAGAGCTATAATTGGAATGAGGAGCTTTCGAGGRCCGCCATAGTCATG
GCATTGCTTAATAATGGAAGTGAAACCTCCAATTCAACGATTGCTTCAAC
GTTAGGAGTGAATTTACGGACTGTTCCGCGTATCTGTAAGAAGCTAGAGG
ACACCTGGGATGTTGATGCCACTATAAAGAGGGCACCCAAGGAGGAGGGC
GCCGACAGGAAGGTCAGAGACACCGACTTTGTCGACAAGGTGAAGAAGAT
GGTTGAGGATGACCCTACCAGGTCAATGAAGGCCGGAGACAGGCCTTGGG
TGTGGCAACAGGACTCAGCACCCTGCCATGTGTCCAAAATATCCATGCAG
TGGTTAACCGAGAACTGTTATGACGTCGTAACCAAGGATTTGTGGCCTCC
GAACTCTCCCAAGCTTAATCCTTTGGACTATTTTGTCTGGGGCTATGTCG
AGAGACATACCAACAGACATCCCCATAGCACCAAGGCCAGCCTGATGGAC
TCCATCAAGGAGGTATTCGGCAACATGGACAATGAGATGGTCAGAAGAGC
CTGCGGCCGGTTCAGAGGTCGTATTGAGGCTGTTATTGATGCCAACGGTG
ATTATATCATATGAATGGCTACTCTATACCTATATGCTCYTCATNNNNNN
NNNNNNNNNNNTTTTKGGCGACAATTTGATCCCCGCTGCCTTTATAACCG
TTAATGACCTTAAATTGGCATCACAGTGAAGACTGGCCARAARAWCCCCA
AAATATCTATATGAATGTTCGTAACGATNMAGAAATCAAAAAGACTAAAC
GTATAGGAAGAAAATGTAGGGGAATATAAGAACATTTTTTATGGATTTTG
AAGAAGACTTAAGACTTTGGGATTAAAGTTAGAAGACAGTTTTTGTGTGG
AAAGATGTGCTTAATAAAGTACATAGAGAAGATAATATGGGAGCAAAATT
GAAGGTCGTTAGAGCCTTTTAAGGGAATGTGGATTTTAAGAAGAAATAAT
TTAGAAGGTTATGTCAGGKCTATGATGCAATAGACGAAGTTTATAGAGTT
GGTTGGCGTCTGAAGAAAATAGATTGAATGGCAAAAAAACAAAAATCGCC
TATGATTATTCCTGGAGGCATAGTTGCAAAATGTATCGTACAACATCACC
ATGAGAAGGTTTATCACGGGGAATCAAGACGAACACTGCATTTATTTTAC
TTGATGGGTTGTGGATAATTGGACTATCACGTATAGTATAGAAAGTTATA
AATACTTGTATCGATTGTAGAATTGCAAATCTACCCGCTATGGCTCAACA
GTTGGGACAATTACCTGGTATTCGTATGGCGAAATAA

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