EMLSAG00000005371, EMLSAG00000005371-688137 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000005371
Unique NameEMLSAG00000005371-688137
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
BLAST of EMLSAG00000005371 vs. C. finmarchicus
Match: gi|592827132|gb|GAXK01129389.1| (TSA: Calanus finmarchicus comp236765_c0_seq16 transcribed RNA sequence)

HSP 1 Score: 49.6766 bits (117), Expect = 3.770e-5
Identity = 19/69 (27.54%), Postives = 40/69 (57.97%), Query Frame = 0
Query:  950 KHRQPFSKSDDLKIVNWIVKRHCYGALSGNLIWKRIESDRTLRHKSADSIHKRFMSHILPNISSFDLGK 1018
            ++RQP+S+ ++  +VN+ ++   Y    GN +W+++E D     ++  S+ +RF  +I  N+  F + K
Sbjct:  357 RYRQPYSRGEEEAVVNYFLRNGGYSVRGGNAVWQKMEEDWICPGRTWQSLRERFDKNIEKNLKQFGVSK 563          

HSP 2 Score: 39.6614 bits (91), Expect = 4.986e-2
Identity = 25/83 (30.12%), Postives = 42/83 (50.60%), Query Frame = 0
Query:  158 KINRPYSHDEQVDILKFIISHGKHNKLKDINTWREMEADGVCSGLRXATSLKEHFRKQILPRIHVKTYPQF--SEEDLNKILR 238
            +  +PYS  E+  ++ + + +G ++       W++ME D +C G R   SL+E F K I      K   QF  S++ L K+ R
Sbjct:  333 RYRQPYSRGEEEAVVNYFLRNGGYSVRGGNAVWQKMEEDWICPG-RTWQSLRERFDKNI-----EKNLKQFGVSKQQLEKVDR 563          
BLAST of EMLSAG00000005371 vs. C. finmarchicus
Match: gi|592827152|gb|GAXK01129377.1| (TSA: Calanus finmarchicus comp236765_c0_seq4 transcribed RNA sequence)

HSP 1 Score: 49.6766 bits (117), Expect = 4.406e-5
Identity = 19/69 (27.54%), Postives = 40/69 (57.97%), Query Frame = 0
Query:  950 KHRQPFSKSDDLKIVNWIVKRHCYGALSGNLIWKRIESDRTLRHKSADSIHKRFMSHILPNISSFDLGK 1018
            ++RQP+S+ ++  +VN+ ++   Y    GN +W+++E D     ++  S+ +RF  +I  N+  F + K
Sbjct:  357 RYRQPYSRGEEEAVVNYFLRNGGYSVRGGNAVWQKMEEDWICPGRTWQSLRERFDKNIEKNLKQFGVSK 563          

HSP 2 Score: 39.6614 bits (91), Expect = 5.415e-2
Identity = 25/83 (30.12%), Postives = 42/83 (50.60%), Query Frame = 0
Query:  158 KINRPYSHDEQVDILKFIISHGKHNKLKDINTWREMEADGVCSGLRXATSLKEHFRKQILPRIHVKTYPQF--SEEDLNKILR 238
            +  +PYS  E+  ++ + + +G ++       W++ME D +C G R   SL+E F K I      K   QF  S++ L K+ R
Sbjct:  333 RYRQPYSRGEEEAVVNYFLRNGGYSVRGGNAVWQKMEEDWICPG-RTWQSLRERFDKNI-----EKNLKQFGVSKQQLEKVDR 563          
BLAST of EMLSAG00000005371 vs. C. finmarchicus
Match: gi|592866342|gb|GAXK01091220.1| (TSA: Calanus finmarchicus comp261078_c2_seq1 transcribed RNA sequence)

HSP 1 Score: 49.6766 bits (117), Expect = 4.417e-5
Identity = 25/66 (37.88%), Postives = 41/66 (62.12%), Query Frame = 0
Query:  156 NRKINRPYSHDEQVDILKFIISHGKHNKLKDINTWREMEADGVCSGLRXATSLKEHFRKQILPRIH 221
            +RK  + Y+  E ++ILKFI  + +   +K    W+++E   +  G R   S+KEHFRK+I+P+IH
Sbjct: 1603 SRKNAKYYTKAEDLNILKFIEENQRFEDVKGNKVWQDIEEKEILEG-RTWQSMKEHFRKKIIPQIH 1797          

HSP 2 Score: 44.2838 bits (103), Expect = 2.169e-3
Identity = 24/75 (32.00%), Postives = 42/75 (56.00%), Query Frame = 0
Query:  942 LKLSKKRKKHRQPFSKSDDLKIVNWIVKRHCYGALSGNLIWKRIESDRTLRHKSADSIHKRFMSHILPNISSFDL 1016
            LK S+K  K+   ++K++DL I+ +I +   +  + GN +W+ IE    L  ++  S+ + F   I+P I SF L
Sbjct: 1594 LKGSRKNAKY---YTKAEDLNILKFIEENQRFEDVKGNKVWQDIEEKEILEGRTWQSMKEHFRKKIIPQIHSFGL 1809          
BLAST of EMLSAG00000005371 vs. C. finmarchicus
Match: gi|592827154|gb|GAXK01129375.1| (TSA: Calanus finmarchicus comp236765_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 49.6766 bits (117), Expect = 4.800e-5
Identity = 19/69 (27.54%), Postives = 40/69 (57.97%), Query Frame = 0
Query:  950 KHRQPFSKSDDLKIVNWIVKRHCYGALSGNLIWKRIESDRTLRHKSADSIHKRFMSHILPNISSFDLGK 1018
            ++RQP+S+ ++  +VN+ ++   Y    GN +W+++E D     ++  S+ +RF  +I  N+  F + K
Sbjct:  357 RYRQPYSRGEEEAVVNYFLRNGGYSVRGGNAVWQKMEEDWICPGRTWQSLRERFDKNIEKNLKQFGVSK 563          

HSP 2 Score: 39.6614 bits (91), Expect = 5.739e-2
Identity = 25/83 (30.12%), Postives = 42/83 (50.60%), Query Frame = 0
Query:  158 KINRPYSHDEQVDILKFIISHGKHNKLKDINTWREMEADGVCSGLRXATSLKEHFRKQILPRIHVKTYPQF--SEEDLNKILR 238
            +  +PYS  E+  ++ + + +G ++       W++ME D +C G R   SL+E F K I      K   QF  S++ L K+ R
Sbjct:  333 RYRQPYSRGEEEAVVNYFLRNGGYSVRGGNAVWQKMEEDWICPG-RTWQSLRERFDKNI-----EKNLKQFGVSKQQLEKVDR 563          
BLAST of EMLSAG00000005371 vs. C. finmarchicus
Match: gi|592827110|gb|GAXK01129400.1| (TSA: Calanus finmarchicus comp236765_c0_seq27 transcribed RNA sequence)

HSP 1 Score: 47.3654 bits (111), Expect = 1.398e-4
Identity = 25/99 (25.25%), Postives = 54/99 (54.55%), Query Frame = 0
Query:  923 KSKALPGRSISSIKKRLCALKLSKK---RKKHRQPFSKSDDLKIVNWIVKRHCYGALSGNLIWKRIESDRTLRHKSADSIHKRFMSHILPNISSFDLGK 1018
            K+K+L  ++++S  K   A K  ++     + +QP+S+ ++  +VN+ ++   Y    GN +W+++E D     ++  S+ +RF  +I  N+  F + K
Sbjct:  357 KAKSLKKKTVTSFTKTKSA-KAEREFWYNSRFKQPYSRGEEEAVVNYFLRNGGYSVRGGNAVWQKMEEDWICPGRTWQSLRERFDKNIEKNLKQFGVSK 650          

HSP 2 Score: 40.817 bits (94), Expect = 1.765e-2
Identity = 26/85 (30.59%), Postives = 43/85 (50.59%), Query Frame = 0
Query:  156 NRKINRPYSHDEQVDILKFIISHGKHNKLKDINTWREMEADGVCSGLRXATSLKEHFRKQILPRIHVKTYPQF--SEEDLNKILR 238
            N +  +PYS  E+  ++ + + +G ++       W++ME D +C G R   SL+E F K I      K   QF  S++ L K+ R
Sbjct:  333 NSRFKQPYSRGEEEAVVNYFLRNGGYSVRGGNAVWQKMEEDWICPG-RTWQSLRERFDKNI-----EKNLKQFGVSKQQLEKVDR 569          
BLAST of EMLSAG00000005371 vs. C. finmarchicus
Match: gi|592827134|gb|GAXK01129388.1| (TSA: Calanus finmarchicus comp236765_c0_seq15 transcribed RNA sequence)

HSP 1 Score: 46.595 bits (109), Expect = 3.533e-4
Identity = 18/69 (26.09%), Postives = 39/69 (56.52%), Query Frame = 0
Query:  950 KHRQPFSKSDDLKIVNWIVKRHCYGALSGNLIWKRIESDRTLRHKSADSIHKRFMSHILPNISSFDLGK 1018
            + +QP+S+ ++  +VN+ ++   Y    GN +W+++E D     ++  S+ +RF  +I  N+  F + K
Sbjct:  357 RFKQPYSRGEEEAVVNYFLRNGGYSVRGGNAVWQKMEEDWICPGRTWQSLRERFDKNIEKNLKQFGVSK 563          

HSP 2 Score: 41.2022 bits (95), Expect = 1.525e-2
Identity = 26/85 (30.59%), Postives = 43/85 (50.59%), Query Frame = 0
Query:  156 NRKINRPYSHDEQVDILKFIISHGKHNKLKDINTWREMEADGVCSGLRXATSLKEHFRKQILPRIHVKTYPQF--SEEDLNKILR 238
            N +  +PYS  E+  ++ + + +G ++       W++ME D +C G R   SL+E F K I      K   QF  S++ L K+ R
Sbjct:  333 NSRFKQPYSRGEEEAVVNYFLRNGGYSVRGGNAVWQKMEEDWICPG-RTWQSLRERFDKNI-----EKNLKQFGVSKQQLEKVDR 569          
BLAST of EMLSAG00000005371 vs. C. finmarchicus
Match: gi|592827142|gb|GAXK01129384.1| (TSA: Calanus finmarchicus comp236765_c0_seq11 transcribed RNA sequence)

HSP 1 Score: 46.595 bits (109), Expect = 3.888e-4
Identity = 18/69 (26.09%), Postives = 39/69 (56.52%), Query Frame = 0
Query:  950 KHRQPFSKSDDLKIVNWIVKRHCYGALSGNLIWKRIESDRTLRHKSADSIHKRFMSHILPNISSFDLGK 1018
            + +QP+S+ ++  +VN+ ++   Y    GN +W+++E D     ++  S+ +RF  +I  N+  F + K
Sbjct:  357 RFKQPYSRGEEEAVVNYFLRNGGYSVRGGNAVWQKMEEDWICPGRTWQSLRERFDKNIEKNLKQFGVSK 563          

HSP 2 Score: 41.2022 bits (95), Expect = 1.585e-2
Identity = 26/85 (30.59%), Postives = 43/85 (50.59%), Query Frame = 0
Query:  156 NRKINRPYSHDEQVDILKFIISHGKHNKLKDINTWREMEADGVCSGLRXATSLKEHFRKQILPRIHVKTYPQF--SEEDLNKILR 238
            N +  +PYS  E+  ++ + + +G ++       W++ME D +C G R   SL+E F K I      K   QF  S++ L K+ R
Sbjct:  333 NSRFKQPYSRGEEEAVVNYFLRNGGYSVRGGNAVWQKMEEDWICPG-RTWQSLRERFDKNI-----EKNLKQFGVSKQQLEKVDR 569          
BLAST of EMLSAG00000005371 vs. C. finmarchicus
Match: gi|592827144|gb|GAXK01129383.1| (TSA: Calanus finmarchicus comp236765_c0_seq10 transcribed RNA sequence)

HSP 1 Score: 46.595 bits (109), Expect = 3.898e-4
Identity = 18/69 (26.09%), Postives = 39/69 (56.52%), Query Frame = 0
Query:  950 KHRQPFSKSDDLKIVNWIVKRHCYGALSGNLIWKRIESDRTLRHKSADSIHKRFMSHILPNISSFDLGK 1018
            + +QP+S+ ++  +VN+ ++   Y    GN +W+++E D     ++  S+ +RF  +I  N+  F + K
Sbjct:  357 RFKQPYSRGEEEAVVNYFLRNGGYSVRGGNAVWQKMEEDWICPGRTWQSLRERFDKNIEKNLKQFGVSK 563          

HSP 2 Score: 41.2022 bits (95), Expect = 1.588e-2
Identity = 26/85 (30.59%), Postives = 43/85 (50.59%), Query Frame = 0
Query:  156 NRKINRPYSHDEQVDILKFIISHGKHNKLKDINTWREMEADGVCSGLRXATSLKEHFRKQILPRIHVKTYPQF--SEEDLNKILR 238
            N +  +PYS  E+  ++ + + +G ++       W++ME D +C G R   SL+E F K I      K   QF  S++ L K+ R
Sbjct:  333 NSRFKQPYSRGEEEAVVNYFLRNGGYSVRGGNAVWQKMEEDWICPG-RTWQSLRERFDKNI-----EKNLKQFGVSKQQLEKVDR 569          
BLAST of EMLSAG00000005371 vs. C. finmarchicus
Match: gi|592827149|gb|GAXK01129380.1| (TSA: Calanus finmarchicus comp236765_c0_seq7 transcribed RNA sequence)

HSP 1 Score: 46.595 bits (109), Expect = 4.003e-4
Identity = 18/69 (26.09%), Postives = 39/69 (56.52%), Query Frame = 0
Query:  950 KHRQPFSKSDDLKIVNWIVKRHCYGALSGNLIWKRIESDRTLRHKSADSIHKRFMSHILPNISSFDLGK 1018
            + +QP+S+ ++  +VN+ ++   Y    GN +W+++E D     ++  S+ +RF  +I  N+  F + K
Sbjct:  357 RFKQPYSRGEEEAVVNYFLRNGGYSVRGGNAVWQKMEEDWICPGRTWQSLRERFDKNIEKNLKQFGVSK 563          

HSP 2 Score: 41.2022 bits (95), Expect = 1.622e-2
Identity = 26/85 (30.59%), Postives = 43/85 (50.59%), Query Frame = 0
Query:  156 NRKINRPYSHDEQVDILKFIISHGKHNKLKDINTWREMEADGVCSGLRXATSLKEHFRKQILPRIHVKTYPQF--SEEDLNKILR 238
            N +  +PYS  E+  ++ + + +G ++       W++ME D +C G R   SL+E F K I      K   QF  S++ L K+ R
Sbjct:  333 NSRFKQPYSRGEEEAVVNYFLRNGGYSVRGGNAVWQKMEEDWICPG-RTWQSLRERFDKNI-----EKNLKQFGVSKQQLEKVDR 569          
BLAST of EMLSAG00000005371 vs. C. finmarchicus
Match: gi|592827150|gb|GAXK01129379.1| (TSA: Calanus finmarchicus comp236765_c0_seq6 transcribed RNA sequence)

HSP 1 Score: 46.595 bits (109), Expect = 4.003e-4
Identity = 18/69 (26.09%), Postives = 39/69 (56.52%), Query Frame = 0
Query:  950 KHRQPFSKSDDLKIVNWIVKRHCYGALSGNLIWKRIESDRTLRHKSADSIHKRFMSHILPNISSFDLGK 1018
            + +QP+S+ ++  +VN+ ++   Y    GN +W+++E D     ++  S+ +RF  +I  N+  F + K
Sbjct:  357 RFKQPYSRGEEEAVVNYFLRNGGYSVRGGNAVWQKMEEDWICPGRTWQSLRERFDKNIEKNLKQFGVSK 563          

HSP 2 Score: 41.2022 bits (95), Expect = 1.622e-2
Identity = 26/85 (30.59%), Postives = 43/85 (50.59%), Query Frame = 0
Query:  156 NRKINRPYSHDEQVDILKFIISHGKHNKLKDINTWREMEADGVCSGLRXATSLKEHFRKQILPRIHVKTYPQF--SEEDLNKILR 238
            N +  +PYS  E+  ++ + + +G ++       W++ME D +C G R   SL+E F K I      K   QF  S++ L K+ R
Sbjct:  333 NSRFKQPYSRGEEEAVVNYFLRNGGYSVRGGNAVWQKMEEDWICPG-RTWQSLRERFDKNI-----EKNLKQFGVSKQQLEKVDR 569          
BLAST of EMLSAG00000005371 vs. L. salmonis peptides
Match: EMLSAP00000005371 (pep:novel supercontig:LSalAtl2s:LSalAtl2s28:125235:128394:-1 gene:EMLSAG00000005371 transcript:EMLSAT00000005371 description:"maker-LSalAtl2s28-augustus-gene-1.51")

HSP 1 Score: 2115.5 bits (5480), Expect = 0.000e+0
Identity = 1029/1029 (100.00%), Postives = 1029/1029 (100.00%), Query Frame = 0
Query:    1 MTSMETLFHEGYAPFTLFTHPSDASPIVFCMNEGPEYFRIRKMIESGGGVLEKARKFDGTHKRIRIHDKKMIALEKEVDIFDMTYILDCVKENNLRTDLGNYRLGISLFEEYDPYDILIGEKTWMDIKKLNDIGEECSQLDNFDKAVLTPSASSKNRKINRPYSHDEQVDILKFIISHGKHNKLKDINTWREMEADGVCSGLRXATSLKEHFRKQILPRIHVKTYPQFSEEDLNKILRGWKGSKAFVPPSFKVEVLERSSTPKKSVPCNNDAANHRXANVKSENSVRALRKSPRKLIHSDKTRIDESFDTNNKEEEEPTNPSNKRIKLCSLNKPKASSTPIHKYFVKESQVRITETQEKTNSKNIPSHCLNSTNFGSFPEELVAFLEKGSQSNLHYDREQCLNKESTTSNKGRKSMSLVNYYELKENRISPKRNEDENSIPIIIDGAKGQLGGRSGVGDVYVTVSKALGLSQTDPLKSKEHEAFTKTRMSQSLNYSSQTKFLATWNPGQKDDSQEPEEKEHSSDLDSSSESNNSRDTEDSSNDLCRKNGGDSRNEGNTALSNSFPKNKSQLFMNFPNSPNLMISNVKYSTGVNCVEDNETMNIVPNEVEGGSQISITEHKVILTGEPMNENTVLVKDYDKNLLKCINKKIVKVALRRLSSIQLSKFGIHSEPLESSYIDESDTNRSDSSEDEVILPSNHDRNNAQISQSQPLSNKSSGLAHHLSLTQEPTRQPRRGRPPYKQTKPATKKKAVLHSKNVKARSNSRKRQLYSSKEESIPIAFTPVESATVSSRVSKNNFQSLVFPYKNPTQKTFNDNKDLSSEEENEEYHPSDNSDTSGNSVCSMKLRNAQRPHIDSHQKHRERKKALKIKKKAETETLDFDTVFPIQKKESSEDSFTVEEDAILLELLGKGHISGSDIKQLYKSKALPGRSISSIKKRLCALKLSKKRKKHRQPFSKSDDLKIVNWIVKRHCYGALSGNLIWKRIESDRTLRHKSADSIHKRFMSHILPNISSFDLGKDIESKFIVATS 1029
            MTSMETLFHEGYAPFTLFTHPSDASPIVFCMNEGPEYFRIRKMIESGGGVLEKARKFDGTHKRIRIHDKKMIALEKEVDIFDMTYILDCVKENNLRTDLGNYRLGISLFEEYDPYDILIGEKTWMDIKKLNDIGEECSQLDNFDKAVLTPSASSKNRKINRPYSHDEQVDILKFIISHGKHNKLKDINTWREMEADGVCSGLRXATSLKEHFRKQILPRIHVKTYPQFSEEDLNKILRGWKGSKAFVPPSFKVEVLERSSTPKKSVPCNNDAANHRXANVKSENSVRALRKSPRKLIHSDKTRIDESFDTNNKEEEEPTNPSNKRIKLCSLNKPKASSTPIHKYFVKESQVRITETQEKTNSKNIPSHCLNSTNFGSFPEELVAFLEKGSQSNLHYDREQCLNKESTTSNKGRKSMSLVNYYELKENRISPKRNEDENSIPIIIDGAKGQLGGRSGVGDVYVTVSKALGLSQTDPLKSKEHEAFTKTRMSQSLNYSSQTKFLATWNPGQKDDSQEPEEKEHSSDLDSSSESNNSRDTEDSSNDLCRKNGGDSRNEGNTALSNSFPKNKSQLFMNFPNSPNLMISNVKYSTGVNCVEDNETMNIVPNEVEGGSQISITEHKVILTGEPMNENTVLVKDYDKNLLKCINKKIVKVALRRLSSIQLSKFGIHSEPLESSYIDESDTNRSDSSEDEVILPSNHDRNNAQISQSQPLSNKSSGLAHHLSLTQEPTRQPRRGRPPYKQTKPATKKKAVLHSKNVKARSNSRKRQLYSSKEESIPIAFTPVESATVSSRVSKNNFQSLVFPYKNPTQKTFNDNKDLSSEEENEEYHPSDNSDTSGNSVCSMKLRNAQRPHIDSHQKHRERKKALKIKKKAETETLDFDTVFPIQKKESSEDSFTVEEDAILLELLGKGHISGSDIKQLYKSKALPGRSISSIKKRLCALKLSKKRKKHRQPFSKSDDLKIVNWIVKRHCYGALSGNLIWKRIESDRTLRHKSADSIHKRFMSHILPNISSFDLGKDIESKFIVATS
Sbjct:    1 MTSMETLFHEGYAPFTLFTHPSDASPIVFCMNEGPEYFRIRKMIESGGGVLEKARKFDGTHKRIRIHDKKMIALEKEVDIFDMTYILDCVKENNLRTDLGNYRLGISLFEEYDPYDILIGEKTWMDIKKLNDIGEECSQLDNFDKAVLTPSASSKNRKINRPYSHDEQVDILKFIISHGKHNKLKDINTWREMEADGVCSGLRXATSLKEHFRKQILPRIHVKTYPQFSEEDLNKILRGWKGSKAFVPPSFKVEVLERSSTPKKSVPCNNDAANHRXANVKSENSVRALRKSPRKLIHSDKTRIDESFDTNNKEEEEPTNPSNKRIKLCSLNKPKASSTPIHKYFVKESQVRITETQEKTNSKNIPSHCLNSTNFGSFPEELVAFLEKGSQSNLHYDREQCLNKESTTSNKGRKSMSLVNYYELKENRISPKRNEDENSIPIIIDGAKGQLGGRSGVGDVYVTVSKALGLSQTDPLKSKEHEAFTKTRMSQSLNYSSQTKFLATWNPGQKDDSQEPEEKEHSSDLDSSSESNNSRDTEDSSNDLCRKNGGDSRNEGNTALSNSFPKNKSQLFMNFPNSPNLMISNVKYSTGVNCVEDNETMNIVPNEVEGGSQISITEHKVILTGEPMNENTVLVKDYDKNLLKCINKKIVKVALRRLSSIQLSKFGIHSEPLESSYIDESDTNRSDSSEDEVILPSNHDRNNAQISQSQPLSNKSSGLAHHLSLTQEPTRQPRRGRPPYKQTKPATKKKAVLHSKNVKARSNSRKRQLYSSKEESIPIAFTPVESATVSSRVSKNNFQSLVFPYKNPTQKTFNDNKDLSSEEENEEYHPSDNSDTSGNSVCSMKLRNAQRPHIDSHQKHRERKKALKIKKKAETETLDFDTVFPIQKKESSEDSFTVEEDAILLELLGKGHISGSDIKQLYKSKALPGRSISSIKKRLCALKLSKKRKKHRQPFSKSDDLKIVNWIVKRHCYGALSGNLIWKRIESDRTLRHKSADSIHKRFMSHILPNISSFDLGKDIESKFIVATS 1029          
BLAST of EMLSAG00000005371 vs. L. salmonis peptides
Match: EMLSAP00000005253 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2800:1463:11742:1 gene:EMLSAG00000005253 transcript:EMLSAT00000005253 description:"maker-LSalAtl2s2800-snap-gene-0.6")

HSP 1 Score: 511.916 bits (1317), Expect = 9.404e-173
Identity = 252/341 (73.90%), Postives = 285/341 (83.58%), Query Frame = 0
Query:    1 MTSMETLFHEGYAPFTLFTHPSDASPIVFCMNEGPEYFRIRKMIESGGGVLEKARKFDGTHKRIRIHDKKMIALEKEVDIFDMTYILDCVKENNLRTDLGNYRLGISLFEEYDPYDILIGEKTWMDIKKLNDIGEECSQLDNFDKAVLTPSASSKNRKINRPYSHDEQVDILKFIISHGKHNKLKDINTWREMEADGVCSGLRXATSLKEHFRKQILPRIHVKTYPQFSEEDLNKILRGWKGSKAFVPPSFKVEVLERSSTPKKSVPCNNDAANHRXANVKSENSVRALRKSPRKLIHSDKTRIDESFDTNNKEEEEPTNPSNKRIKLCSLNKPKASSTPI 341
            M S  TLFH+ YAPF+LFTHPSDASPIVF MNEGPEY+R+++MIE GGG+LEKA KFD THKRIRIHDKKMI LEK+VD FDMTYILDCVKENNLR DL NYRLG+SLFEEYDPYDILIGEKTW+D+KK  +I EE  +LDNFDKA+LTPSA+SKNRK N   S+D QV ILK+II+HGK+N LKDINTWR M+  GVCSGLR A SLKEHFRKQILP I++KTYPQFSEEDLNKILRGWKGSK     SF VEVLERSS  K++VPC++DAA H+ ANVK ENSV  L+KS RKLI+ DKT  DESF   NK+EE    PS KRIK+C+LNK +ASSTPI
Sbjct:    1 MASKNTLFHDEYAPFSLFTHPSDASPIVFTMNEGPEYYRLQEMIEKGGGLLEKASKFDETHKRIRIHDKKMINLEKDVDNFDMTYILDCVKENNLRNDLCNYRLGVSLFEEYDPYDILIGEKTWIDLKKRKNIEEEYMELDNFDKALLTPSANSKNRKSN---SYDGQVHILKYIITHGKYNSLKDINTWRRMKVGGVCSGLRTAISLKEHFRKQILPHINIKTYPQFSEEDLNKILRGWKGSKT----SFNVEVLERSSRLKQNVPCSDDAAMHKQANVKIENSVGPLQKSSRKLINKDKTHFDESFGIINKKEEVTAMPSYKRIKICNLNKLEASSTPI 334          
BLAST of EMLSAG00000005371 vs. L. salmonis peptides
Match: EMLSAP00000000138 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1021:425:1572:-1 gene:EMLSAG00000000138 transcript:EMLSAT00000000138 description:"maker-LSalAtl2s1021-snap-gene-0.40")

HSP 1 Score: 151.754 bits (382), Expect = 1.028e-41
Identity = 75/103 (72.82%), Postives = 85/103 (82.52%), Query Frame = 0
Query:   71 MIALEKEVDIFDMTYILDCVKENNLRTDLGNYRLGISLFEEYDPYDILIGEKTWMDIKKLNDIGEECSQLDNFDKAVLTPSASSKNRKINRPYSHDEQVDILK 173
            MI LEK+VD FDMTYILDCVKENNLR DL NYRLG+SLFEEYDPYDILIGEKTW+D+KK  +I EE  ++DNFDKA+LTPSA+SKNRK N       Q D+LK
Sbjct:    1 MINLEKDVDNFDMTYILDCVKENNLRNDLCNYRLGVSLFEEYDPYDILIGEKTWIDLKKRKNIEEEYMEIDNFDKALLTPSANSKNRK-NCNTLWLSQTDVLK 102          

HSP 2 Score: 97.4413 bits (241), Expect = 8.186e-23
Identity = 53/73 (72.60%), Postives = 57/73 (78.08%), Query Frame = 0
Query:  467 ALGLSQTDPLKSKEHEAFTKTRMSQSLNYSSQTKFLATWNPGQKDDSQEPEEKEHSSDLDSSSESNNSRDTED 539
             L LSQTD LKSKEHEAF+KT M QSLNYSSQTKFLATWN  QKD S+EPE+KE SSD  S S+ NNS  T D
Sbjct:   92 TLWLSQTDVLKSKEHEAFSKTCMLQSLNYSSQTKFLATWNLRQKDSSKEPEKKERSSDSYSLSKCNNSWYTND 164          
BLAST of EMLSAG00000005371 vs. nr
Match: gi|1067073071|ref|XP_018020006.1| (PREDICTED: uncharacterized protein LOC108676446 [Hyalella azteca])

HSP 1 Score: 75.0998 bits (183), Expect = 5.736e-10
Identity = 60/211 (28.44%), Postives = 99/211 (46.92%), Query Frame = 0
Query:   26 PIVFCMNEGPEYFRIRKMIESGGGVLEKARKFDGTHK-RIRIHDKKMIALEKEVDIFDMTYILDCVKENNLRTDLGNYRLGISLFEEYDPYD------ILIGEKTWMDIKKLNDIGEECSQLDNFDKAVLTPSA-------SSKNRKI----NRPYSHDEQVDILKFIISHGKHNKLKDINTWREMEADGVCSGLRXATSLKEHFRKQILP 218
            P  F M + PE  RI+ +IE  GGV+  +    G H   + I D+  I+   +   F   YI DCV  ++   +L +YR+     ++  PYD      +++GE TW ++  +           +   +  + S        +SK  K+     R YS++++ +I+KFI+ +     +     W  M A  VC G R   SLKEHF+K+I+P
Sbjct:   19 PFAFSMYDCPEKPRIKALIEGHGGVMMPSPY--GPHTIHLGIPDRITIS---QRPTFSSRYIEDCVAIDDF-LNLKDYRI-----DQGPPYDAQKMLRVMLGEMTWEEVIPIQCCIPPPPPRPDRSSSSSSSSDDESSSVNNSKQVKVVFSKRRDYSNEDRENIVKFILHNDLAEAVHGRKMWENMAAAKVCRGRRTWHSLKEHFKKKIIP 218          
BLAST of EMLSAG00000005371 vs. nr
Match: gi|926648164|ref|XP_013790488.1| (PREDICTED: uncharacterized protein LOC106474343 [Limulus polyphemus])

HSP 1 Score: 71.2478 bits (173), Expect = 7.708e-9
Identity = 55/199 (27.64%), Postives = 97/199 (48.74%), Query Frame = 0
Query:   22 SDASPIVFCMNEGPEYFRIRKMIESGGGVLEKARKFDGTHKRIRIHDKKMIALEKEVDIFDMTYILDCVKENNLRTDLGNYRLGISLFEEYDPYDILIGEKTWMDIKKLNDIGEECSQLDNFDKAVLTPSASSKNRKINRPYSHDEQVDILKFIISHGKHNKLKDINTWREMEADGVCSGLRXATSLKEHFRKQILPRI 220
            ++ +P+ F M    E  ++R +IE GGGV+      D  +K +    + +   E  V      YI+DCV+ N L                ++  D LI  +T  D+  ++D   E + + N ++ +L  S  +KN +  + YS ++Q  I+ FI +  +++++K    W++ME+  V    R   S+KEHF KQI P +
Sbjct:   12 ANGTPMQFYMRPSAEKEKLRPLIEHGGGVVTSKLTSDA-YKLVEPGSRVLTCDENTVR---SKYIVDCVESNTL----------------FNIEDYLIKTET-EDVSDISDT--EPNSMKNKNEFIL--STKAKNTRARKEYSVEDQQAIINFICTKNRYSEIKGTRLWKDMESKNVLPS-RTWQSMKEHFLKQIYPNL 184          
BLAST of EMLSAG00000005371 vs. nr
Match: gi|919032008|ref|XP_013399642.1| (PREDICTED: telomeric repeat-binding factor 2-interacting protein 1-like isoform X2 [Lingula anatina])

HSP 1 Score: 64.3142 bits (155), Expect = 5.821e-7
Identity = 54/205 (26.34%), Postives = 95/205 (46.34%), Query Frame = 0
Query:   16 TLFTHPSDASPIVFCMNEGPEYFRIRKMIESGGGVLEKARKFDGTHKRIRIHDKKMIALEKEVDIFDMTYILDCVKENNLRTDLGNYRLGISLFEEYDPYDILIGEKTWMDIKKLNDIGEECSQLDNFDKAVLTPSASSKNRKINRPYSHDEQVDILKFIISHGKHNKLKDINTWREMEADGVCSGLRXATSLKEHFRKQILPRI 220
            TLFT+P D +P+ F M    E   +R ++E GGG+L   +  D     I++ +   +   K  D +   +I DCV++N L  D+  YRL         P D+       M  + ++D         + + A      ++K+R+  + Y   E+V+I+K I+ +  +  +     W++ME   + S      S+K H++  ILP I
Sbjct:    9 TLFTNP-DGTPMHFYMRPCDERAILRPVVEHGGGILSGKQGNDS----IKLAEPGSVV--KSDDYYLANFITDCVEKNTL-MDIEKYRL--------KPCDVAGENMIVMSTEAVDDT--------DLEPAEHIIRLTAKDRRGRKKYMLSEEVNIIKHIVENRLYLDVGGNRVWKDMEKLEITS--HSWQSMKHHYKMHILPNI 187          
BLAST of EMLSAG00000005371 vs. nr
Match: gi|919032006|ref|XP_013399641.1| (PREDICTED: telomeric repeat-binding factor 2-interacting protein 1-like isoform X1 [Lingula anatina])

HSP 1 Score: 64.3142 bits (155), Expect = 6.571e-7
Identity = 54/205 (26.34%), Postives = 95/205 (46.34%), Query Frame = 0
Query:   16 TLFTHPSDASPIVFCMNEGPEYFRIRKMIESGGGVLEKARKFDGTHKRIRIHDKKMIALEKEVDIFDMTYILDCVKENNLRTDLGNYRLGISLFEEYDPYDILIGEKTWMDIKKLNDIGEECSQLDNFDKAVLTPSASSKNRKINRPYSHDEQVDILKFIISHGKHNKLKDINTWREMEADGVCSGLRXATSLKEHFRKQILPRI 220
            TLFT+P D +P+ F M    E   +R ++E GGG+L   +  D     I++ +   +   K  D +   +I DCV++N L  D+  YRL         P D+       M  + ++D         + + A      ++K+R+  + Y   E+V+I+K I+ +  +  +     W++ME   + S      S+K H++  ILP I
Sbjct:    9 TLFTNP-DGTPMHFYMRPCDERAILRPVVEHGGGILSGKQGNDS----IKLAEPGSVV--KSDDYYLANFITDCVEKNTL-MDIEKYRL--------KPCDVAGENMIVMSTEAVDDT--------DLEPAEHIIRLTAKDRRGRKKYMLSEEVNIIKHIVENRLYLDVGGNRVWKDMEKLEITS--HSWQSMKHHYKMHILPNI 187          
BLAST of EMLSAG00000005371 vs. nr
Match: gi|919077253|ref|XP_013419741.1| (PREDICTED: telomeric repeat-binding factor 2-interacting protein 1-like [Lingula anatina])

HSP 1 Score: 64.3142 bits (155), Expect = 6.743e-7
Identity = 54/205 (26.34%), Postives = 95/205 (46.34%), Query Frame = 0
Query:   16 TLFTHPSDASPIVFCMNEGPEYFRIRKMIESGGGVLEKARKFDGTHKRIRIHDKKMIALEKEVDIFDMTYILDCVKENNLRTDLGNYRLGISLFEEYDPYDILIGEKTWMDIKKLNDIGEECSQLDNFDKAVLTPSASSKNRKINRPYSHDEQVDILKFIISHGKHNKLKDINTWREMEADGVCSGLRXATSLKEHFRKQILPRI 220
            TLFT+P D +P+ F M    E   +R ++E GGG+L   +  D     I++ +   +   K  D +   +I DCV++N L  D+  YRL         P D+       M  + ++D         + + A      ++K+R+  + Y   E+V+I+K I+ +  +  +     W++ME   + S      S+K H++  ILP I
Sbjct:    9 TLFTNP-DGTPMHFYMRPCDERAILRPVVEHGGGILSGKQGNDS----IKLAEPGSVV--KSDDYYLANFITDCVEKNTL-MDIEKYRL--------KPCDVAGENMIVMSTEAVDDT--------DLEPAEHIIRLTAKDRRGRKKYMLSEEVNIIKHIVENRLYLDVGGNRVWKDMEKLEITS--HSWQSMKHHYKMHILPNI 187          
The following BLAST results are available for this feature:
BLAST of EMLSAG00000005371 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of EMLSAG00000005371 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25
Match NameE-valueIdentityDescription
gi|592827132|gb|GAXK01129389.1|3.770e-527.54TSA: Calanus finmarchicus comp236765_c0_seq16 tran... [more]
gi|592827152|gb|GAXK01129377.1|4.406e-527.54TSA: Calanus finmarchicus comp236765_c0_seq4 trans... [more]
gi|592866342|gb|GAXK01091220.1|4.417e-537.88TSA: Calanus finmarchicus comp261078_c2_seq1 trans... [more]
gi|592827154|gb|GAXK01129375.1|4.800e-527.54TSA: Calanus finmarchicus comp236765_c0_seq2 trans... [more]
gi|592827110|gb|GAXK01129400.1|1.398e-425.25TSA: Calanus finmarchicus comp236765_c0_seq27 tran... [more]
gi|592827134|gb|GAXK01129388.1|3.533e-426.09TSA: Calanus finmarchicus comp236765_c0_seq15 tran... [more]
gi|592827142|gb|GAXK01129384.1|3.888e-426.09TSA: Calanus finmarchicus comp236765_c0_seq11 tran... [more]
gi|592827144|gb|GAXK01129383.1|3.898e-426.09TSA: Calanus finmarchicus comp236765_c0_seq10 tran... [more]
gi|592827149|gb|GAXK01129380.1|4.003e-426.09TSA: Calanus finmarchicus comp236765_c0_seq7 trans... [more]
gi|592827150|gb|GAXK01129379.1|4.003e-426.09TSA: Calanus finmarchicus comp236765_c0_seq6 trans... [more]

Pages

back to top
BLAST of EMLSAG00000005371 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 3
Match NameE-valueIdentityDescription
EMLSAP000000053710.000e+0100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s28:125235... [more]
EMLSAP000000052539.404e-17373.90pep:novel supercontig:LSalAtl2s:LSalAtl2s2800:1463... [more]
EMLSAP000000001381.028e-4172.82pep:novel supercontig:LSalAtl2s:LSalAtl2s1021:425:... [more]
back to top
BLAST of EMLSAG00000005371 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of EMLSAG00000005371 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of EMLSAG00000005371 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 5
Match NameE-valueIdentityDescription
gi|1067073071|ref|XP_018020006.1|5.736e-1028.44PREDICTED: uncharacterized protein LOC108676446 [H... [more]
gi|926648164|ref|XP_013790488.1|7.708e-927.64PREDICTED: uncharacterized protein LOC106474343 [L... [more]
gi|919032008|ref|XP_013399642.1|5.821e-726.34PREDICTED: telomeric repeat-binding factor 2-inter... [more]
gi|919032006|ref|XP_013399641.1|6.571e-726.34PREDICTED: telomeric repeat-binding factor 2-inter... [more]
gi|919077253|ref|XP_013419741.1|6.743e-726.34PREDICTED: telomeric repeat-binding factor 2-inter... [more]
back to top
BLAST of EMLSAG00000005371 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s28supercontigLSalAtl2s28:125235..128394 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s28-augustus-gene-1.51
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000005371 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000005371EMLSAT00000005371-701218Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s28:125235..128394-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000005371-688137 ID=EMLSAG00000005371-688137|Name=EMLSAG00000005371|organism=Lepeophtheirus salmonis|type=gene|length=3160bp|location=Sequence derived from alignment at LSalAtl2s28:125235..128394- (Lepeophtheirus salmonis)
ATGACGTCAATGGAGACGTTGTTTCATGAGGGGTATGCGCCGTTCACCCT CTTCACTCATCCCTCCGATGCGTCTCCCATCGTCTTTTGCATGAATGAAG GCCCGGAATACTTCCGAATACGGAAAATGATCGAATCAGGTGGAGGTGTC TTGGAAAAAGCTCGTAAATTTGACGGGACGCATAAAAGGATCCGGATCCA TGATAAGAAAATGATCGCCCTTGAAAAAGAAGTGGATATTTTCGACATGA CTTATATCCTGGACTGCGTCAAGGGTAAGTCCCAAACTCCTCTTGCATAT TCGTCCTGTGTCCTAGAGTTGTTATTATCCCTCTTTTATTATAGAGAACA ATCTACGCACCGATCTCGGCAATTATCGACTTGGAATCTCTCTTTTCGAG GAATACGACCCTTACGATATTCTCATTGGGGAAAAGACTTGGATGGATAT AAAGAAACTAAATGATATCGGAGAGGAATGCAGCCAATTAGATAACTTTG ACAAAGCTGTCCTCACTCCCTCTGCGTCTTCCAAAAATCGTAAAATCAAT AGACCCTATTCCCATGATGAACAAGTTGATATTCTCAAATTCATCATCAG TCACGGGAAACACAATAAACTTAAAGATATCAACACTTGGAGAGAAATGG AAGCCGATGGAGTATGTTCAGGATTGAGASCAGCCACTTCTTTAAAGGAA CATTTTAGAAAACAAATTCTTCCTAGGATCCATGTTAAAACATATCCCCA ATTTAGTGAAGAGGATTTAAATAAAATCCTGAGAGGTTGGAAAGGCTCAA AGGCTTTTGTTCCTCCTTCGTTTAAAGTTGAAGTATTAGAAAGAAGTTCT ACCCCTAAAAAAAGCGTTCCTTGTAATAATGATGCTGCAAATCATAGAMA AGCCAATGTGAAAAGTGAAAACTCTGTCAGAGCTCTACGAAAAAGTCCTC GAAAGTTGATTCACAGTGATAAAACTCGCATTGATGAATCTTTTGACACA AACAACAAAGAAGAAGAAGAACCTACTAACCCATCAAATAAGCGGATCAA GCTATGTAGTTTGAATAAACCTAAAGCCTCATCCACTCCTATACATAAAT ATTTTGTCAAAGAATCTCAAGTTCGCATTACTGAGACTCAGGAAAAAACA AATTCAAAAAATATTCCATCTCATTGTTTAAATTCCACAAACTTTGGATC CTTCCCTGAAGAACTTGTTGCATTTTTAGAAAAAGGATCACAATCCAATT TACATTATGACAGAGAACAATGTTTGAATAAAGAAAGTACAACTTCGAAT AAAGGAAGAAAGTCCATGTCCCTTGTAAATTATTATGAATTAAAGGAAAA TCGTATTTCTCCAAAAAGAAACGAGGATGAAAATTCAATTCCTATAATCA TTGATGGTGCAAAGGGACAGCTAGGTGGCCGAAGTGGTGTCGGKGATGTA TATGTGACTGTTTCTAAAGCTTTGGGACTATCCCAAACTGATCCTTTGAA ATCAAAGGAGCACGAAGCCTTTACTAAAACTCGTATGTCGCAGAGTCTTA ATTATTCGTCTCAAACAAAGTTTTTAGCTACTTGGAACCCCGGACAAAAA GATGATAGTCAAGAACCAGAAGAAAAAGAACATTCTTCAGACCTTGATTC TTCATCTGAAAGTAATAATTCCCGTGATACTGAAGATTCCTCGAATGATC TATGTAGAAAAAATGGAGGTGATTCAAGGAATGAGGGAAATACAGCACTC TCCAACTCCTTTCCAAAAAATAAAAGTCAATTATTTATGAACTTTCCAAA TAGTCCAAATTTAATGATAAGTAATGTCAAATACTCCACTGGTGTAAATT GTGTGGAGGACAATGAGACAATGAATATAGTTCCAAATGAGGTGGAAGGA GGGTCTCAAATCTCTATAACGGAACATAAAGTTATATTAACTGGAGAACC AATGAATGAAAATACAGTTCTCGTGAAGGATTATGATAAGAACCTACTAA AATGTATAAATAAAAAAATAGTTAAAGTTGCACTTCGTCGATTGTCGTCT ATACAACTTTCAAAATTTGGCATTCATAGCGAACCCCTAGAAAGTAGTTA CATTGATGAATCTGATACTAATAGAAGTGATTCTAGTGAAGACGAAGTGA TTCTTCCATCAAACCATGACAGAAATAATGCTCAAATATCACAAAGYCAG CCGCTAAGTAATAAATCATCGGGCTTAGCCCATCATTTAAGTCTTACACA GGAACCAACTCGACAACCTCGTAGGGGACGTCCACCTTACAAGCAAACAA AACCTGCTACCAAAAAGAAAGCAGTATTACATTCTAAAAATGTCAAAGCC CGATCTAATTCAAGAAAACGACAATTATATTCCAGCAAAGAAGAATCTAT ACCTATCGCTTTTACTCCGGTTGAAAGTGCTACCGTTTCTTCAAGAGTAT CAAAAAATAATTTTCAATCTCTAGTCTTCCCCTACAAAAATCCTACTCAA AAGACCTTTAATGACAATAAAGATTTATCATCGGAAGAAGAAAATGAGGA GTACCACCCTTCTGACAACTCGGATACATCAGGGAACTCTGTTTGTAGTA TGAAATTAAGAAACGCTCAAAGGCCTCATATAGACTCTCATCAGAAACAT CGAGAGAGAAAAAAGGCTTTAAAAATTAAAAAGAAGGCAGAAACTGAGAC ATTGGATTTTGACACTGTTTTTCCTATACAAAAAAAAGAATCTTCTGAAG ATTCGTTCACTGTGGAAGAAGATGCAATTCTATTGGAGCTGTTAGGAAAA GGACATATAAGTGGATCTGATATCAAACAGTTATATAAATCGAAAGCTTT ACCAGGACGGAGTATAAGCTCCATCAAAAAGCGACTATGTGCTTTGAAGC TTAGCAAAAAACGGAAGAAACATAGACAACCCTTTTCCAAATCAGACGAC CTTAAAATTGTTAATTGGATTGTAAAAAGACATTGTTATGGGGCATTAAG TGGTAATTTGATATGGAAGAGGATTGAATCCGACAGAACMCTCCGTCATA AGTCTGCTGATTCTATCCATAAAAGGTTTATGTCCCATATCTTACCTAAT ATTTCATCATTTGACCTGGGTAAAGATATTGAATCCAAGTTTATTGTTGC CACTAGCTAA
back to top
Add to Basket