EMLSAG00000005706, EMLSAG00000005706-688472 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000005706 vs. C. finmarchicus
Match: gi|592907259|gb|GAXK01051116.1| (TSA: Calanus finmarchicus comp764378_c0_seq1 transcribed RNA sequence) HSP 1 Score: 41.5874 bits (96), Expect = 4.654e-3 Identity = 42/153 (27.45%), Postives = 62/153 (40.52%), Query Frame = 0 Query: 32 KEKDPLHVSCQGSRPYSICKI---TLPQGTICTIKGGESEKSCEDGAKFDKTDPNACALDIESASSDFNGFYKCEIITFEDDDGGKATSDAQDIEVIVSTPADVEFDDIYGSV--------TVIVNKQNNFTCTAEY-GRPVGEFIWRLGEED 172 +E + L + C+ S PY C T T GGE + G ++ K+ C L +E AS +F G +KC + D D + + V V+TPA V + + T+ V CT E G+P LGEE+ Sbjct: 483 REGEELDLFCESSTPYQWCYWAHNTSEYPTTSHKGGGEETEETVWGFQWRKSSTR-CGLHVERASVEFRGAWKCHLAD-TDVMASDNMRDEKWVRVHVATPAMVGISVTHTMLGQEDDTLSTINVGDNLEVICTVEEDGQPSPSLSLLLGEEN 935
BLAST of EMLSAG00000005706 vs. C. finmarchicus
Match: gi|592755674|gb|GAXK01198739.1| (TSA: Calanus finmarchicus comp2867929_c0_seq1 transcribed RNA sequence) HSP 1 Score: 40.0466 bits (92), Expect = 6.347e-3 Identity = 41/174 (23.56%), Postives = 72/174 (41.38%), Query Frame = 0 Query: 30 IVKEKDPLHVSCQGSRPYSICKITLPQG-TICTIKGGESEKS--CEDGAKFDKTDP--NACALDIESASSDFNGFYKCEIITFEDDDGGKATSDAQDIEVIVSTPADVEFDDIYG----SVTVIVNKQNNFTCTAEYGRPVGEFIWRLGEEDEDNAVFFDNESPMNIVKDENSY 194 +V E + +SC +P+ +C P C ++ GE + C+ G + ++C + IE+ SD +G + C ++T D T ++ V D G +V ++ + +FTC AE G P F W +G ++ D E ++ NSY Sbjct: 8 LVLEGSSVLLSCPSPQPWLLCVWLSPLSHKHCAVRVGERMRGGVCQGGGWRNIGGGGEDSCEMRIEADQSD-HGSWTC-LLTLAKDYHSTTTYLGMEVAVRPRLSIWQHHDGQPGLVGQAVHLLEGAEYSFTCLAEQGFPRPVFYWSVGNTSAMMSLQADQEP--SVTLSANSY 517
BLAST of EMLSAG00000005706 vs. C. finmarchicus
Match: gi|592915263|gb|GAXK01043112.1| (TSA: Calanus finmarchicus comp50832_c6_seq3 transcribed RNA sequence) HSP 1 Score: 39.6614 bits (91), Expect = 1.659e-2 Identity = 33/140 (23.57%), Postives = 57/140 (40.71%), Query Frame = 0 Query: 4 LKILWSLLFLYGSNIGLLHGIESSLIIVKEKDPLHVSCQGSRPYSICKITLPQGTICTIKGGESE-----KSC---EDGAKFDKTDPNACALDIESASSDFNGFYKCEI---ITFEDDDGGKATSDAQDIEVIVSTPADV 132 +KIL +LL L S+ L+ E +++V + + C Y CK P G C + SE + C E + + + C + ++ D G ++CEI +T+ G+ + + V V P V Sbjct: 126 MKILVALLLLQTSHAFLITKAEPGVVVVAPGARVTLFCAVDDHYEWCKFYHPSGEFCDFEWKRSEGNITMQECGLHERVEFYGQYEDKECGVTFKAEEGD-TGVWRCEIEEYVTWRSRGAGRVQT--AQMNVTVQAPTTV 536
BLAST of EMLSAG00000005706 vs. C. finmarchicus
Match: gi|592822811|gb|GAXK01131757.1| (TSA: Calanus finmarchicus comp160673_c1_seq2 transcribed RNA sequence) HSP 1 Score: 38.1206 bits (87), Expect = 5.757e-2 Identity = 29/107 (27.10%), Postives = 48/107 (44.86%), Query Frame = 0 Query: 28 LIIVKEKDPLHVSCQGSRPYSICKITLPQGTICTIKGGESEKSCEDGAKFDKTDPNA-CALDIESASSDFNGFYKCEIITFEDDDGGKATSDAQDIEVIVSTPADVE 133 LI+ + + L + C+ S PY C + T+ G E S F+ + C + I S + G +KC + D++ ++ D + IEV V+ PA VE Sbjct: 192 LIVARRGEELELFCESSSPYQWCYWAHGEQEFRTVIGDEGLIS---PLSFEWVKSSTKCGVKITSLEDEHAGEWKCHMAD-TDEEEVESIRDERFIEVFVAHPARVE 500
BLAST of EMLSAG00000005706 vs. C. finmarchicus
Match: gi|592822812|gb|GAXK01131756.1| (TSA: Calanus finmarchicus comp160673_c1_seq1 transcribed RNA sequence) HSP 1 Score: 38.1206 bits (87), Expect = 6.161e-2 Identity = 29/107 (27.10%), Postives = 48/107 (44.86%), Query Frame = 0 Query: 28 LIIVKEKDPLHVSCQGSRPYSICKITLPQGTICTIKGGESEKSCEDGAKFDKTDPNA-CALDIESASSDFNGFYKCEIITFEDDDGGKATSDAQDIEVIVSTPADVE 133 LI+ + + L + C+ S PY C + T+ G E S F+ + C + I S + G +KC + D++ ++ D + IEV V+ PA VE Sbjct: 192 LIVARRGEELELFCESSSPYQWCYWAHGEQEFRTVIGDEGLIS---PLSFEWVKSSTKCGVKITSLEDEHAGEWKCHMAD-TDEEEVESIRDERFIEVFVAHPARVE 500
BLAST of EMLSAG00000005706 vs. L. salmonis peptides
Match: EMLSAP00000005706 (pep:novel supercontig:LSalAtl2s:LSalAtl2s309:39291:41869:-1 gene:EMLSAG00000005706 transcript:EMLSAT00000005706 description:"maker-LSalAtl2s309-augustus-gene-0.29") HSP 1 Score: 837.41 bits (2162), Expect = 0.000e+0 Identity = 406/406 (100.00%), Postives = 406/406 (100.00%), Query Frame = 0 Query: 1 MTNLKILWSLLFLYGSNIGLLHGIESSLIIVKEKDPLHVSCQGSRPYSICKITLPQGTICTIKGGESEKSCEDGAKFDKTDPNACALDIESASSDFNGFYKCEIITFEDDDGGKATSDAQDIEVIVSTPADVEFDDIYGSVTVIVNKQNNFTCTAEYGRPVGEFIWRLGEEDEDNAVFFDNESPMNIVKDENSYYKVSQSFWYNPEIDHNAKNLYCIYNQHDQDGNVIHSTSDHISFDVYYLNEPAAATLKAKNPRDPSVFMDGKYILDPIINAGDQMYSIGFTISNVTEEDFARTYDVKISNRKKHSNDLILSTVHTFDIQTSTAGGSSDTGSSSTVTGIVISIALILLLITLVTILVMTYMYKKWCFAPKDPHSKPGYDGDVEQPLNDLNDTQIGGSSIIKPRS 406 MTNLKILWSLLFLYGSNIGLLHGIESSLIIVKEKDPLHVSCQGSRPYSICKITLPQGTICTIKGGESEKSCEDGAKFDKTDPNACALDIESASSDFNGFYKCEIITFEDDDGGKATSDAQDIEVIVSTPADVEFDDIYGSVTVIVNKQNNFTCTAEYGRPVGEFIWRLGEEDEDNAVFFDNESPMNIVKDENSYYKVSQSFWYNPEIDHNAKNLYCIYNQHDQDGNVIHSTSDHISFDVYYLNEPAAATLKAKNPRDPSVFMDGKYILDPIINAGDQMYSIGFTISNVTEEDFARTYDVKISNRKKHSNDLILSTVHTFDIQTSTAGGSSDTGSSSTVTGIVISIALILLLITLVTILVMTYMYKKWCFAPKDPHSKPGYDGDVEQPLNDLNDTQIGGSSIIKPRS Sbjct: 1 MTNLKILWSLLFLYGSNIGLLHGIESSLIIVKEKDPLHVSCQGSRPYSICKITLPQGTICTIKGGESEKSCEDGAKFDKTDPNACALDIESASSDFNGFYKCEIITFEDDDGGKATSDAQDIEVIVSTPADVEFDDIYGSVTVIVNKQNNFTCTAEYGRPVGEFIWRLGEEDEDNAVFFDNESPMNIVKDENSYYKVSQSFWYNPEIDHNAKNLYCIYNQHDQDGNVIHSTSDHISFDVYYLNEPAAATLKAKNPRDPSVFMDGKYILDPIINAGDQMYSIGFTISNVTEEDFARTYDVKISNRKKHSNDLILSTVHTFDIQTSTAGGSSDTGSSSTVTGIVISIALILLLITLVTILVMTYMYKKWCFAPKDPHSKPGYDGDVEQPLNDLNDTQIGGSSIIKPRS 406
BLAST of EMLSAG00000005706 vs. Select Arthropod Genomes
Match: EAA05462.4 (AGAP010823-PA, partial [Anopheles gambiae str. PEST]) HSP 1 Score: 72.4034 bits (176), Expect = 7.190e-13 Identity = 83/338 (24.56%), Postives = 139/338 (41.12%), Query Frame = 0 Query: 6 ILWSLLFLY--------GSNIGLLHGIESSLIIVKEKDPLHVSCQGSRPYSICKITLPQGTICTIKGGESEKSCEDGAKF--DKTDPNACALDIESASSDFNGFYKCEIITFEDDDGGKATSDAQDIEVIVSTPADVEFDDIYGS--VTVIVNKQNNFTCTAEYGRPVGEFIWRLGEEDEDNAVFFDNESPMNIVKDENS---YYKVSQSFWYNPEIDHNAKNLYC-----IYNQHDQDGNVI-------HSTSDHISFDVYYLNEPAAATLKAKNPRDPSVFMD------------GKYILDPIINA-GDQMYSIGFTISNVTEEDFARTYDVKISN 303 I W+ LFL+ ++ ++ S+ +V+ ++ + + C+ RP +C I +P G I +EKS G + + D +C + IE ++D G C + DG T IE++V+ P ++ V VN Q F CTAE G P W L +E V F E+P DE S + + + + N K L C Y + ++I + D + + + L A A++ K P V + G+Y + PI A G+ Y++ TI+ +T ED ++TY ++ SN Sbjct: 3 ICWTNLFLFLFSSPTATTTHAQVVDTEPRSITVVENQENVELHCRIGRPAQLCLIRMP-GLNDQIALSPTEKSPVAGYHYHGEGLDKGSCGVRIERVTADNAGLMNCTLFV----DGRGLTGS---IEIVVAFPPQQPVIEVVQGNLANVEVNSQLMFRCTAERGNPAANLSWFLDQEQIYEGVQFP-EAPEEYY-DERSNKHMFTATSTLKRAVRAEDNGKRLTCQAQHLAYPEGVSRTDLILDVNFQPQALPDQVVYGL-QLGRTATASMVIKANPSPHVMWNIDGTDYHQGTEQGRYAV-PIPEALGNNRYNVSLTIAGLTLEDLSKTYVLRASN 328
BLAST of EMLSAG00000005706 vs. nr
Match: gi|158288016|ref|XP_309887.4| (AGAP010823-PA [Anopheles gambiae str. PEST] >gi|157019466|gb|EAA05462.4| AGAP010823-PA [Anopheles gambiae str. PEST]) HSP 1 Score: 72.4034 bits (176), Expect = 3.518e-10 Identity = 83/338 (24.56%), Postives = 139/338 (41.12%), Query Frame = 0 Query: 6 ILWSLLFLY--------GSNIGLLHGIESSLIIVKEKDPLHVSCQGSRPYSICKITLPQGTICTIKGGESEKSCEDGAKF--DKTDPNACALDIESASSDFNGFYKCEIITFEDDDGGKATSDAQDIEVIVSTPADVEFDDIYGS--VTVIVNKQNNFTCTAEYGRPVGEFIWRLGEEDEDNAVFFDNESPMNIVKDENS---YYKVSQSFWYNPEIDHNAKNLYC-----IYNQHDQDGNVI-------HSTSDHISFDVYYLNEPAAATLKAKNPRDPSVFMD------------GKYILDPIINA-GDQMYSIGFTISNVTEEDFARTYDVKISN 303 I W+ LFL+ ++ ++ S+ +V+ ++ + + C+ RP +C I +P G I +EKS G + + D +C + IE ++D G C + DG T IE++V+ P ++ V VN Q F CTAE G P W L +E V F E+P DE S + + + + N K L C Y + ++I + D + + + L A A++ K P V + G+Y + PI A G+ Y++ TI+ +T ED ++TY ++ SN Sbjct: 3 ICWTNLFLFLFSSPTATTTHAQVVDTEPRSITVVENQENVELHCRIGRPAQLCLIRMP-GLNDQIALSPTEKSPVAGYHYHGEGLDKGSCGVRIERVTADNAGLMNCTLFV----DGRGLTGS---IEIVVAFPPQQPVIEVVQGNLANVEVNSQLMFRCTAERGNPAANLSWFLDQEQIYEGVQFP-EAPEEYY-DERSNKHMFTATSTLKRAVRAEDNGKRLTCQAQHLAYPEGVSRTDLILDVNFQPQALPDQVVYGL-QLGRTATASMVIKANPSPHVMWNIDGTDYHQGTEQGRYAV-PIPEALGNNRYNVSLTIAGLTLEDLSKTYVLRASN 328
BLAST of EMLSAG00000005706 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold579_size130606-snap-gene-0.24 (protein:Tk02357 transcript:maker-scaffold579_size130606-snap-gene-0.24-mRNA-1 annotation:"fasciclin ") HSP 1 Score: 121.324 bits (303), Expect = 1.033e-30 Identity = 91/393 (23.16%), Postives = 173/393 (44.02%), Query Frame = 0 Query: 24 IESSLIIVKEKDPLHVSCQGSRPYSICKITLPQGTICTIKGGESEKSCEDGAKFDKT-----DPNACALDIESASSDFNGFYKCEIITFEDDDGGKATSDAQDIEVIVSTPADVEFDDIYGSVTVIVNKQNNFTCTAEYGRPVGEFIWRLGEEDEDNAVFFDNESPMNIVKDENSYYKVSQSFWYNPEIDHNAKNLYCIYNQHDQDGNVIHSTSDHISFDVYYLNEPAAATLKA-------------------KNPRDPSVFMDG-----------------KYILDPIINAGDQMYSIGFTISNVTEEDFARTYDVKISNRKKHSNDLILSTVHTFDIQTSTAGGSSDTGSSSTVTGIVIS-IALILLLITLVTILVMTYMYKKWCFAPKDP 374 I+S +IV+E + + + C +S CK TLP GT C + +C K + +P C++ I + ++G +KC + + + D K S+ I + V+ A VEF ++G++ + + +C A GRP+G F WR+GEE + + + +NE +D Y +V++S Y + + K L+C Y Q D G ++ S D ++ V YL EP +A P D + + Y+ P++ Y + +V +E+ + ++++I R ++ + I + +H F++ + A S++ + IV+S +A ++L++++ I+ K CF P Sbjct: 22 IKSVDVIVEENENVVLWCALEAGFSACKWTLPSGTECAVDS--LSPTCNLDPKVTLSPESLGNPTNCSIVISRVTELYHGEWKCSLKSSQSD---KFFSNI--INMSVAKAAKVEFFPVFGTLRQMRGTSSELSCVARRGRPIGSFKWRIGEETDPDVRYLENEGIPKKDEDAMGYPEVTESVQYVARDEDSGKRLHCTYVQFDTSGRLLFSEEDSLNLIVNYLEEPTGPRTEATGQVGNSMNISFQFEVSPRPQPEDVAWVIKAGIDSKTIRLANSEVRQTHYVAYPMVQLSPTQYEATLMLMDVQKEEESYQHELRIQIRDPNTKEAIKTVIHEFEVIVNEA------DSANLIIIIVLSVVAALVLILSIFIIICWAKRSHKCCFKQNTP 401
BLAST of EMLSAG00000005706 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold630_size122347-snap-gene-0.15 (protein:Tk08031 transcript:maker-scaffold630_size122347-snap-gene-0.15-mRNA-1 annotation:"predicted protein") HSP 1 Score: 56.225 bits (134), Expect = 5.261e-9 Identity = 70/291 (24.05%), Postives = 113/291 (38.83%), Query Frame = 0 Query: 125 IVSTPADVEFDDIYGSVTVIVNKQNNF-----TCTAEYGRPVGEFIWRLGEEDEDNAVFFDNESPMNIVKDENSYYKVSQSFWYNPEIDHNAKNLYCIYNQHDQDGNVIHSTSDHISFDVYYLNEPAAATLKAKNPRDP-------SVF---------------------------MDGKYILDPIINAGDQMYSIGFTISNVTEEDFARTYDVKISNR-KKHSNDLILSTVHTFDIQTSTAGGSSD-----TGSSSTVTGIV------ISIALILLLITLVTILVMTYMY 364 +V T +VEF I+G++T+ N N F TC+ GEF+W +G+E N+ N VK K Q+F P I ++ K + C Y + D G V+ D + ++ ++ P L +P P V+ + G+Y + + + Y ISN+ E D +Y + + + KHS + TF +Q GS T SST IV + I L+++L +V IL++ Y Sbjct: 20 VVQTRPEVEFLGIWGTLTI--NADNIFEKETVTCSVNSKAAEGEFVWIIGDETLVNS---------NEVKSLGKG-KYQQAFSILPYIKYDQKKIRCKYIERDSSGGVVSEAEDSLKLNINFIGLPLKTNLGYYDPSGPIELELEFKVYPKPDNDQIYWTIRNMSVDTEEKLPIGTLMGRYEVMALEALAEPTYRSILKISNINENDEKNSYALVVEHLGNKHSIPV------TFSLQRDMESGSLGFPYVLTNDSSTEKPIVKNSETQLGIGLMIVLGIVVLILLVCIGY 292
BLAST of EMLSAG00000005706 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold131_size323982-snap-gene-2.20 (protein:Tk05548 transcript:maker-scaffold131_size323982-snap-gene-2.20-mRNA-1 annotation:"hypothetical protein EIN_287360") HSP 1 Score: 51.6026 bits (122), Expect = 2.421e-7 Identity = 57/261 (21.84%), Postives = 112/261 (42.91%), Query Frame = 0 Query: 10 LLFLYGSNIGLLHGIESSLIIVKEKDPLHVSCQGSRPYSICKITLPQGTI-CTI-------KGGESEKSCEDGAKFDKTDPNAC--ALDIESASSDFNGFYKCEIITFEDDDGGKATSDAQDIEVIVSTPA--DVEFDDIYGSVTVIVNKQNNFTC------TAEYGRPVGEFIWRLGEEDEDNAVFFDNESPMNIVKDENSYYKV----SQSFWYNPEIDHNAKNLYCIYNQHDQDGNVIHSTSDHISFDVYYLNEPAAA 248 LL L G + G+ ES+ ++V V+ S P CK+ P+G + C+ G + S A F+ C A+D A++D+ G + +F G +A S + ++ P D+E ++ +G ++V +++++F C T E+ P +W++GE ++ ++ N + K+ +Q+F Y P++ + K + C + D+ D + VYY + +A+ Sbjct: 11 LLVLCGLSSGIKFNRESNNVLVGNGQDFTVTIPSSEPPDFCKLLSPRGKLYCSPDVSQYVDAGCDQLPSISITASFE-----GCTFAMDYVDANTDY-GSWTVTASSF----GAEAKS-----TIFLTRPVSIDIEMENTWGILSVKADQESSFLCSLLSEETEEFALPT--MVWKVGE---------------DVKQESNKFDKIKLGYTQNFKYTPDVKDSQKKVSCSFKNGDE------VKQDFVELHVYYFEDKSAS 233 The following BLAST results are available for this feature:
BLAST of EMLSAG00000005706 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000005706 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
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BLAST of EMLSAG00000005706 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000005706 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000005706 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 1
BLAST of EMLSAG00000005706 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 1
BLAST of EMLSAG00000005706 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 3
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s309:39291..41869- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000005706-688472 ID=EMLSAG00000005706-688472|Name=EMLSAG00000005706|organism=Lepeophtheirus salmonis|type=gene|length=2579bp|location=Sequence derived from alignment at LSalAtl2s309:39291..41869- (Lepeophtheirus salmonis)back to top Add to Basket
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