EMLSAG00000005706, EMLSAG00000005706-688472 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000005706
Unique NameEMLSAG00000005706-688472
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
BLAST of EMLSAG00000005706 vs. C. finmarchicus
Match: gi|592907259|gb|GAXK01051116.1| (TSA: Calanus finmarchicus comp764378_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 41.5874 bits (96), Expect = 4.654e-3
Identity = 42/153 (27.45%), Postives = 62/153 (40.52%), Query Frame = 0
Query:   32 KEKDPLHVSCQGSRPYSICKI---TLPQGTICTIKGGESEKSCEDGAKFDKTDPNACALDIESASSDFNGFYKCEIITFEDDDGGKATSDAQDIEVIVSTPADVEFDDIYGSV--------TVIVNKQNNFTCTAEY-GRPVGEFIWRLGEED 172
            +E + L + C+ S PY  C     T    T     GGE  +    G ++ K+    C L +E AS +F G +KC +    D        D + + V V+TPA V     +  +        T+ V       CT E  G+P       LGEE+
Sbjct:  483 REGEELDLFCESSTPYQWCYWAHNTSEYPTTSHKGGGEETEETVWGFQWRKSSTR-CGLHVERASVEFRGAWKCHLAD-TDVMASDNMRDEKWVRVHVATPAMVGISVTHTMLGQEDDTLSTINVGDNLEVICTVEEDGQPSPSLSLLLGEEN 935          
BLAST of EMLSAG00000005706 vs. C. finmarchicus
Match: gi|592755674|gb|GAXK01198739.1| (TSA: Calanus finmarchicus comp2867929_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 40.0466 bits (92), Expect = 6.347e-3
Identity = 41/174 (23.56%), Postives = 72/174 (41.38%), Query Frame = 0
Query:   30 IVKEKDPLHVSCQGSRPYSICKITLPQG-TICTIKGGESEKS--CEDGAKFDKTDP--NACALDIESASSDFNGFYKCEIITFEDDDGGKATSDAQDIEVIVSTPADVEFDDIYG----SVTVIVNKQNNFTCTAEYGRPVGEFIWRLGEEDEDNAVFFDNESPMNIVKDENSY 194
            +V E   + +SC   +P+ +C    P     C ++ GE  +   C+ G   +      ++C + IE+  SD +G + C ++T   D     T    ++ V          D   G    +V ++   + +FTC AE G P   F W +G      ++  D E   ++    NSY
Sbjct:    8 LVLEGSSVLLSCPSPQPWLLCVWLSPLSHKHCAVRVGERMRGGVCQGGGWRNIGGGGEDSCEMRIEADQSD-HGSWTC-LLTLAKDYHSTTTYLGMEVAVRPRLSIWQHHDGQPGLVGQAVHLLEGAEYSFTCLAEQGFPRPVFYWSVGNTSAMMSLQADQEP--SVTLSANSY 517          
BLAST of EMLSAG00000005706 vs. C. finmarchicus
Match: gi|592915263|gb|GAXK01043112.1| (TSA: Calanus finmarchicus comp50832_c6_seq3 transcribed RNA sequence)

HSP 1 Score: 39.6614 bits (91), Expect = 1.659e-2
Identity = 33/140 (23.57%), Postives = 57/140 (40.71%), Query Frame = 0
Query:    4 LKILWSLLFLYGSNIGLLHGIESSLIIVKEKDPLHVSCQGSRPYSICKITLPQGTICTIKGGESE-----KSC---EDGAKFDKTDPNACALDIESASSDFNGFYKCEI---ITFEDDDGGKATSDAQDIEVIVSTPADV 132
            +KIL +LL L  S+  L+   E  +++V     + + C     Y  CK   P G  C  +   SE     + C   E    + + +   C +  ++   D  G ++CEI   +T+     G+  +    + V V  P  V
Sbjct:  126 MKILVALLLLQTSHAFLITKAEPGVVVVAPGARVTLFCAVDDHYEWCKFYHPSGEFCDFEWKRSEGNITMQECGLHERVEFYGQYEDKECGVTFKAEEGD-TGVWRCEIEEYVTWRSRGAGRVQT--AQMNVTVQAPTTV 536          
BLAST of EMLSAG00000005706 vs. C. finmarchicus
Match: gi|592822811|gb|GAXK01131757.1| (TSA: Calanus finmarchicus comp160673_c1_seq2 transcribed RNA sequence)

HSP 1 Score: 38.1206 bits (87), Expect = 5.757e-2
Identity = 29/107 (27.10%), Postives = 48/107 (44.86%), Query Frame = 0
Query:   28 LIIVKEKDPLHVSCQGSRPYSICKITLPQGTICTIKGGESEKSCEDGAKFDKTDPNA-CALDIESASSDFNGFYKCEIITFEDDDGGKATSDAQDIEVIVSTPADVE 133
            LI+ +  + L + C+ S PY  C     +    T+ G E   S      F+    +  C + I S   +  G +KC +    D++  ++  D + IEV V+ PA VE
Sbjct:  192 LIVARRGEELELFCESSSPYQWCYWAHGEQEFRTVIGDEGLIS---PLSFEWVKSSTKCGVKITSLEDEHAGEWKCHMAD-TDEEEVESIRDERFIEVFVAHPARVE 500          
BLAST of EMLSAG00000005706 vs. C. finmarchicus
Match: gi|592822812|gb|GAXK01131756.1| (TSA: Calanus finmarchicus comp160673_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 38.1206 bits (87), Expect = 6.161e-2
Identity = 29/107 (27.10%), Postives = 48/107 (44.86%), Query Frame = 0
Query:   28 LIIVKEKDPLHVSCQGSRPYSICKITLPQGTICTIKGGESEKSCEDGAKFDKTDPNA-CALDIESASSDFNGFYKCEIITFEDDDGGKATSDAQDIEVIVSTPADVE 133
            LI+ +  + L + C+ S PY  C     +    T+ G E   S      F+    +  C + I S   +  G +KC +    D++  ++  D + IEV V+ PA VE
Sbjct:  192 LIVARRGEELELFCESSSPYQWCYWAHGEQEFRTVIGDEGLIS---PLSFEWVKSSTKCGVKITSLEDEHAGEWKCHMAD-TDEEEVESIRDERFIEVFVAHPARVE 500          
BLAST of EMLSAG00000005706 vs. L. salmonis peptides
Match: EMLSAP00000005706 (pep:novel supercontig:LSalAtl2s:LSalAtl2s309:39291:41869:-1 gene:EMLSAG00000005706 transcript:EMLSAT00000005706 description:"maker-LSalAtl2s309-augustus-gene-0.29")

HSP 1 Score: 837.41 bits (2162), Expect = 0.000e+0
Identity = 406/406 (100.00%), Postives = 406/406 (100.00%), Query Frame = 0
Query:    1 MTNLKILWSLLFLYGSNIGLLHGIESSLIIVKEKDPLHVSCQGSRPYSICKITLPQGTICTIKGGESEKSCEDGAKFDKTDPNACALDIESASSDFNGFYKCEIITFEDDDGGKATSDAQDIEVIVSTPADVEFDDIYGSVTVIVNKQNNFTCTAEYGRPVGEFIWRLGEEDEDNAVFFDNESPMNIVKDENSYYKVSQSFWYNPEIDHNAKNLYCIYNQHDQDGNVIHSTSDHISFDVYYLNEPAAATLKAKNPRDPSVFMDGKYILDPIINAGDQMYSIGFTISNVTEEDFARTYDVKISNRKKHSNDLILSTVHTFDIQTSTAGGSSDTGSSSTVTGIVISIALILLLITLVTILVMTYMYKKWCFAPKDPHSKPGYDGDVEQPLNDLNDTQIGGSSIIKPRS 406
            MTNLKILWSLLFLYGSNIGLLHGIESSLIIVKEKDPLHVSCQGSRPYSICKITLPQGTICTIKGGESEKSCEDGAKFDKTDPNACALDIESASSDFNGFYKCEIITFEDDDGGKATSDAQDIEVIVSTPADVEFDDIYGSVTVIVNKQNNFTCTAEYGRPVGEFIWRLGEEDEDNAVFFDNESPMNIVKDENSYYKVSQSFWYNPEIDHNAKNLYCIYNQHDQDGNVIHSTSDHISFDVYYLNEPAAATLKAKNPRDPSVFMDGKYILDPIINAGDQMYSIGFTISNVTEEDFARTYDVKISNRKKHSNDLILSTVHTFDIQTSTAGGSSDTGSSSTVTGIVISIALILLLITLVTILVMTYMYKKWCFAPKDPHSKPGYDGDVEQPLNDLNDTQIGGSSIIKPRS
Sbjct:    1 MTNLKILWSLLFLYGSNIGLLHGIESSLIIVKEKDPLHVSCQGSRPYSICKITLPQGTICTIKGGESEKSCEDGAKFDKTDPNACALDIESASSDFNGFYKCEIITFEDDDGGKATSDAQDIEVIVSTPADVEFDDIYGSVTVIVNKQNNFTCTAEYGRPVGEFIWRLGEEDEDNAVFFDNESPMNIVKDENSYYKVSQSFWYNPEIDHNAKNLYCIYNQHDQDGNVIHSTSDHISFDVYYLNEPAAATLKAKNPRDPSVFMDGKYILDPIINAGDQMYSIGFTISNVTEEDFARTYDVKISNRKKHSNDLILSTVHTFDIQTSTAGGSSDTGSSSTVTGIVISIALILLLITLVTILVMTYMYKKWCFAPKDPHSKPGYDGDVEQPLNDLNDTQIGGSSIIKPRS 406          
BLAST of EMLSAG00000005706 vs. Select Arthropod Genomes
Match: EAA05462.4 (AGAP010823-PA, partial [Anopheles gambiae str. PEST])

HSP 1 Score: 72.4034 bits (176), Expect = 7.190e-13
Identity = 83/338 (24.56%), Postives = 139/338 (41.12%), Query Frame = 0
Query:    6 ILWSLLFLY--------GSNIGLLHGIESSLIIVKEKDPLHVSCQGSRPYSICKITLPQGTICTIKGGESEKSCEDGAKF--DKTDPNACALDIESASSDFNGFYKCEIITFEDDDGGKATSDAQDIEVIVSTPADVEFDDIYGS--VTVIVNKQNNFTCTAEYGRPVGEFIWRLGEEDEDNAVFFDNESPMNIVKDENS---YYKVSQSFWYNPEIDHNAKNLYC-----IYNQHDQDGNVI-------HSTSDHISFDVYYLNEPAAATLKAKNPRDPSVFMD------------GKYILDPIINA-GDQMYSIGFTISNVTEEDFARTYDVKISN 303
            I W+ LFL+         ++  ++     S+ +V+ ++ + + C+  RP  +C I +P G    I    +EKS   G  +  +  D  +C + IE  ++D  G   C +      DG   T     IE++V+ P      ++       V VN Q  F CTAE G P     W L +E     V F  E+P     DE S    +  + +       + N K L C      Y +     ++I        +  D + + +  L   A A++  K    P V  +            G+Y + PI  A G+  Y++  TI+ +T ED ++TY ++ SN
Sbjct:    3 ICWTNLFLFLFSSPTATTTHAQVVDTEPRSITVVENQENVELHCRIGRPAQLCLIRMP-GLNDQIALSPTEKSPVAGYHYHGEGLDKGSCGVRIERVTADNAGLMNCTLFV----DGRGLTGS---IEIVVAFPPQQPVIEVVQGNLANVEVNSQLMFRCTAERGNPAANLSWFLDQEQIYEGVQFP-EAPEEYY-DERSNKHMFTATSTLKRAVRAEDNGKRLTCQAQHLAYPEGVSRTDLILDVNFQPQALPDQVVYGL-QLGRTATASMVIKANPSPHVMWNIDGTDYHQGTEQGRYAV-PIPEALGNNRYNVSLTIAGLTLEDLSKTYVLRASN 328          
BLAST of EMLSAG00000005706 vs. nr
Match: gi|158288016|ref|XP_309887.4| (AGAP010823-PA [Anopheles gambiae str. PEST] >gi|157019466|gb|EAA05462.4| AGAP010823-PA [Anopheles gambiae str. PEST])

HSP 1 Score: 72.4034 bits (176), Expect = 3.518e-10
Identity = 83/338 (24.56%), Postives = 139/338 (41.12%), Query Frame = 0
Query:    6 ILWSLLFLY--------GSNIGLLHGIESSLIIVKEKDPLHVSCQGSRPYSICKITLPQGTICTIKGGESEKSCEDGAKF--DKTDPNACALDIESASSDFNGFYKCEIITFEDDDGGKATSDAQDIEVIVSTPADVEFDDIYGS--VTVIVNKQNNFTCTAEYGRPVGEFIWRLGEEDEDNAVFFDNESPMNIVKDENS---YYKVSQSFWYNPEIDHNAKNLYC-----IYNQHDQDGNVI-------HSTSDHISFDVYYLNEPAAATLKAKNPRDPSVFMD------------GKYILDPIINA-GDQMYSIGFTISNVTEEDFARTYDVKISN 303
            I W+ LFL+         ++  ++     S+ +V+ ++ + + C+  RP  +C I +P G    I    +EKS   G  +  +  D  +C + IE  ++D  G   C +      DG   T     IE++V+ P      ++       V VN Q  F CTAE G P     W L +E     V F  E+P     DE S    +  + +       + N K L C      Y +     ++I        +  D + + +  L   A A++  K    P V  +            G+Y + PI  A G+  Y++  TI+ +T ED ++TY ++ SN
Sbjct:    3 ICWTNLFLFLFSSPTATTTHAQVVDTEPRSITVVENQENVELHCRIGRPAQLCLIRMP-GLNDQIALSPTEKSPVAGYHYHGEGLDKGSCGVRIERVTADNAGLMNCTLFV----DGRGLTGS---IEIVVAFPPQQPVIEVVQGNLANVEVNSQLMFRCTAERGNPAANLSWFLDQEQIYEGVQFP-EAPEEYY-DERSNKHMFTATSTLKRAVRAEDNGKRLTCQAQHLAYPEGVSRTDLILDVNFQPQALPDQVVYGL-QLGRTATASMVIKANPSPHVMWNIDGTDYHQGTEQGRYAV-PIPEALGNNRYNVSLTIAGLTLEDLSKTYVLRASN 328          
BLAST of EMLSAG00000005706 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold579_size130606-snap-gene-0.24 (protein:Tk02357 transcript:maker-scaffold579_size130606-snap-gene-0.24-mRNA-1 annotation:"fasciclin ")

HSP 1 Score: 121.324 bits (303), Expect = 1.033e-30
Identity = 91/393 (23.16%), Postives = 173/393 (44.02%), Query Frame = 0
Query:   24 IESSLIIVKEKDPLHVSCQGSRPYSICKITLPQGTICTIKGGESEKSCEDGAKFDKT-----DPNACALDIESASSDFNGFYKCEIITFEDDDGGKATSDAQDIEVIVSTPADVEFDDIYGSVTVIVNKQNNFTCTAEYGRPVGEFIWRLGEEDEDNAVFFDNESPMNIVKDENSYYKVSQSFWYNPEIDHNAKNLYCIYNQHDQDGNVIHSTSDHISFDVYYLNEPAAATLKA-------------------KNPRDPSVFMDG-----------------KYILDPIINAGDQMYSIGFTISNVTEEDFARTYDVKISNRKKHSNDLILSTVHTFDIQTSTAGGSSDTGSSSTVTGIVIS-IALILLLITLVTILVMTYMYKKWCFAPKDP 374
            I+S  +IV+E + + + C     +S CK TLP GT C +       +C    K   +     +P  C++ I   +  ++G +KC + + + D   K  S+   I + V+  A VEF  ++G++  +    +  +C A  GRP+G F WR+GEE + +  + +NE      +D   Y +V++S  Y    + + K L+C Y Q D  G ++ S  D ++  V YL EP     +A                     P D +  +                    Y+  P++      Y     + +V +E+ +  ++++I  R  ++ + I + +H F++  + A       S++ +  IV+S +A ++L++++  I+       K CF    P
Sbjct:   22 IKSVDVIVEENENVVLWCALEAGFSACKWTLPSGTECAVDS--LSPTCNLDPKVTLSPESLGNPTNCSIVISRVTELYHGEWKCSLKSSQSD---KFFSNI--INMSVAKAAKVEFFPVFGTLRQMRGTSSELSCVARRGRPIGSFKWRIGEETDPDVRYLENEGIPKKDEDAMGYPEVTESVQYVARDEDSGKRLHCTYVQFDTSGRLLFSEEDSLNLIVNYLEEPTGPRTEATGQVGNSMNISFQFEVSPRPQPEDVAWVIKAGIDSKTIRLANSEVRQTHYVAYPMVQLSPTQYEATLMLMDVQKEEESYQHELRIQIRDPNTKEAIKTVIHEFEVIVNEA------DSANLIIIIVLSVVAALVLILSIFIIICWAKRSHKCCFKQNTP 401          
BLAST of EMLSAG00000005706 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold630_size122347-snap-gene-0.15 (protein:Tk08031 transcript:maker-scaffold630_size122347-snap-gene-0.15-mRNA-1 annotation:"predicted protein")

HSP 1 Score: 56.225 bits (134), Expect = 5.261e-9
Identity = 70/291 (24.05%), Postives = 113/291 (38.83%), Query Frame = 0
Query:  125 IVSTPADVEFDDIYGSVTVIVNKQNNF-----TCTAEYGRPVGEFIWRLGEEDEDNAVFFDNESPMNIVKDENSYYKVSQSFWYNPEIDHNAKNLYCIYNQHDQDGNVIHSTSDHISFDVYYLNEPAAATLKAKNPRDP-------SVF---------------------------MDGKYILDPIINAGDQMYSIGFTISNVTEEDFARTYDVKISNR-KKHSNDLILSTVHTFDIQTSTAGGSSD-----TGSSSTVTGIV------ISIALILLLITLVTILVMTYMY 364
            +V T  +VEF  I+G++T+  N  N F     TC+       GEF+W +G+E   N+         N VK      K  Q+F   P I ++ K + C Y + D  G V+    D +  ++ ++  P    L   +P  P        V+                           + G+Y +  +    +  Y     ISN+ E D   +Y + + +   KHS  +      TF +Q     GS       T  SST   IV      + I L+++L  +V IL++   Y
Sbjct:   20 VVQTRPEVEFLGIWGTLTI--NADNIFEKETVTCSVNSKAAEGEFVWIIGDETLVNS---------NEVKSLGKG-KYQQAFSILPYIKYDQKKIRCKYIERDSSGGVVSEAEDSLKLNINFIGLPLKTNLGYYDPSGPIELELEFKVYPKPDNDQIYWTIRNMSVDTEEKLPIGTLMGRYEVMALEALAEPTYRSILKISNINENDEKNSYALVVEHLGNKHSIPV------TFSLQRDMESGSLGFPYVLTNDSSTEKPIVKNSETQLGIGLMIVLGIVVLILLVCIGY 292          
BLAST of EMLSAG00000005706 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold131_size323982-snap-gene-2.20 (protein:Tk05548 transcript:maker-scaffold131_size323982-snap-gene-2.20-mRNA-1 annotation:"hypothetical protein EIN_287360")

HSP 1 Score: 51.6026 bits (122), Expect = 2.421e-7
Identity = 57/261 (21.84%), Postives = 112/261 (42.91%), Query Frame = 0
Query:   10 LLFLYGSNIGLLHGIESSLIIVKEKDPLHVSCQGSRPYSICKITLPQGTI-CTI-------KGGESEKSCEDGAKFDKTDPNAC--ALDIESASSDFNGFYKCEIITFEDDDGGKATSDAQDIEVIVSTPA--DVEFDDIYGSVTVIVNKQNNFTC------TAEYGRPVGEFIWRLGEEDEDNAVFFDNESPMNIVKDENSYYKV----SQSFWYNPEIDHNAKNLYCIYNQHDQDGNVIHSTSDHISFDVYYLNEPAAA 248
            LL L G + G+    ES+ ++V       V+   S P   CK+  P+G + C+         G +   S    A F+      C  A+D   A++D+ G +     +F    G +A S      + ++ P   D+E ++ +G ++V  +++++F C      T E+  P    +W++GE               ++ ++ N + K+    +Q+F Y P++  + K + C +   D+         D +   VYY  + +A+
Sbjct:   11 LLVLCGLSSGIKFNRESNNVLVGNGQDFTVTIPSSEPPDFCKLLSPRGKLYCSPDVSQYVDAGCDQLPSISITASFE-----GCTFAMDYVDANTDY-GSWTVTASSF----GAEAKS-----TIFLTRPVSIDIEMENTWGILSVKADQESSFLCSLLSEETEEFALPT--MVWKVGE---------------DVKQESNKFDKIKLGYTQNFKYTPDVKDSQKKVSCSFKNGDE------VKQDFVELHVYYFEDKSAS 233          
The following BLAST results are available for this feature:
BLAST of EMLSAG00000005706 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000005706 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25
Match NameE-valueIdentityDescription
gi|592907259|gb|GAXK01051116.1|4.654e-327.45TSA: Calanus finmarchicus comp764378_c0_seq1 trans... [more]
gi|592755674|gb|GAXK01198739.1|6.347e-323.56TSA: Calanus finmarchicus comp2867929_c0_seq1 tran... [more]
gi|592915263|gb|GAXK01043112.1|1.659e-223.57TSA: Calanus finmarchicus comp50832_c6_seq3 transc... [more]
gi|592822811|gb|GAXK01131757.1|5.757e-227.10TSA: Calanus finmarchicus comp160673_c1_seq2 trans... [more]
gi|592822812|gb|GAXK01131756.1|6.161e-227.10TSA: Calanus finmarchicus comp160673_c1_seq1 trans... [more]

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BLAST of EMLSAG00000005706 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000057060.000e+0100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s309:39291... [more]
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BLAST of EMLSAG00000005706 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000005706 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 1
Match NameE-valueIdentityDescription
EAA05462.47.190e-1324.56AGAP010823-PA, partial [Anopheles gambiae str. PES... [more]
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BLAST of EMLSAG00000005706 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 1
Match NameE-valueIdentityDescription
gi|158288016|ref|XP_309887.4|3.518e-1024.56AGAP010823-PA [Anopheles gambiae str. PEST] >gi|15... [more]
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BLAST of EMLSAG00000005706 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 3
Match NameE-valueIdentityDescription
maker-scaffold579_size130606-snap-gene-0.241.033e-3023.16protein:Tk02357 transcript:maker-scaffold579_size1... [more]
maker-scaffold630_size122347-snap-gene-0.155.261e-924.05protein:Tk08031 transcript:maker-scaffold630_size1... [more]
maker-scaffold131_size323982-snap-gene-2.202.421e-721.84protein:Tk05548 transcript:maker-scaffold131_size3... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s309supercontigLSalAtl2s309:39291..41869 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s309-augustus-gene-0.29
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000005706 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000005706EMLSAT00000005706-701553Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s309:39291..41869-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000005706-688472 ID=EMLSAG00000005706-688472|Name=EMLSAG00000005706|organism=Lepeophtheirus salmonis|type=gene|length=2579bp|location=Sequence derived from alignment at LSalAtl2s309:39291..41869- (Lepeophtheirus salmonis)
ATGACGAATTTGAAAATTCTCTGGTCTCTTCTTTTCCTTTATGGGTCGAA CATTGGCCTTCTTCATGGAATTGAAAGTTCCTTGATAATTGTGAAAGAAA AAGATCCTCTACACGTTTCTTGTCAAGGGAGTCGTCCGTAAGTTATTAAT TATAATTAGCCAAACGTATGATTGCCTCCTTCATTAATTATTATTGGTAT GCCTCAGATACTCAATATGCAAGATTACCCTCCCGCAAGGAACTATTTGT ACAATCAAGGGAGGAGAATCCGAGAAAAGTTGTGAGGATGGAGCTAAATT TGATAAGACGGATCCTAACGCTTGTGCCCTTGATATTGAATCTGCAAGCT CAGATTTCAACGGATTTTACAAGGTACATTATTTGTATATCACTCGGTTA TTATGATTTTTTTTTAAATTATTTTATTTTGAATATTAGTGTGAGATTAT TACATTTGAAGACGATGATGGGGGAAAGGCTACGTCAGATGCCCAAGATA TTGAAGTAATTGTATCAACGCCTGCTGACGTGGAATTCGATGATATTTAC GGATCTGTTACTGTTATCGTTAGTAAGTTGTATTCGAAATAATATTATGG TATTACTTTAGAGATATGTGCAACTTTTTTTCCTAAAATGTCCTTTATAA TCACGTTACTGTTAGTATGATTCGAAAATTTCAATTTATGAAATGAAACA CTATAGCAGGTCTGTTCAAATATTATAACCAAATGTCAGGTTAGACAATG AATAGCTCTGTAAATCTTCCATCCATGTTGCTGAACTATATTGTTTTGTA CTGGGCTTGGGGCTGAACAACAACATTTAGAAGGTTCGGATTCAGATCCT AGMCCACAAGTAGAGTAGACTTGCAAGACAATATTGTATTTATCATTTAT AAAAAAAATAGCCACATAAAAACCTATTAGAGGGCCACATAAGCACAATT GACCTCTGATAGACATAATTCATTACAATTAATACGTATTATTCTAAATT TACATAGACAAGCAAAATAATTTCACATGTACTGCCGAATATGGACGCCC CGTTGGAGAGTTCATTTGGCGACTTGGTGAAGAAGACGAGGACAATGCTG TATTTTTTGATAACGAATCCCCAATGAATATTGTGAAAGATGAAAATAGT TATTACAAGGTGTCTCAAGTATGTATATAAATTGGATTATTTGATATATC CATTGGCCATTCTCTTTCTTCCGACTAATCAAAACCAATGTTTTTTTCTT ACAGAGCTTTTGGTATAATCCTGAAATTGACCATAATGCGAAAAATCTCT ACTGCATCTATAATCAACATGATCAAGATGGAAATGTTATTCATAGTACA AGTGATCATATTTCTTTTGATGTCTACTATTTGAATGAACCTGCAGCAGC AACTGTTATTCCAAAGGTGGATGTAAGTGATTTGATTGATTTTATACGTT TATATGCTGCGTAGAAGTTGTAACCAAAAAATTCGATGGAGAATTTAGAG TACATGTGAGGAGGAATGTACAATATCTGTATWTTCYTTGGATAGAYTAT CCATTAATGCTATCATTTTGGACTTTTTGTATGAAAACTACTAATGAATA AGCATTTTGTGACATATTATAAAGTTCAAATGCCCTCATTGACCTAACTC GTAAATGCATAATAACCATGATAGATTTTAATAAAACAAAATGAAATGAT AGCACCAATTAATAGTTGGTAATTTTAATGACAAATGTTATATAATTAAA CAAGGAATTATAAATTGCAACTCGTTTATAATTACAACTTGTACATTACA CATATTTATATTTGTTCAAATTCAATCACATTTTAAATCCGTTTTTACAC TTATAATAAAAGCTTGGTGAGGATTTTCATATATCTTACATCTTTGGCTC ATACCCTAAGCCAAAAATTGAAGACATAATATGGAGAATTAAGGGAACTG AGGATGTAAACATTGAGGTAATTAATTACTACTCTAAATTAATTATTAAT TTGAATGCTCATTATTGAATAAAACGCCATATCCTAATAGTTAAAAGCAA AAAACCCAAGGGATCCATCCGTATTTATGGATGGAAAATATATTTTGGAT CCAATTATAAATGCTGGAGATCAAATGTATAGCATTGGTTTTACTATTTC AAACGTTACTGAAGAGGATTTTGCAAGAACTTACGATGTGAAAATTAGTA ATCGTAAAAAACATTCCAACGATCTTATCCTTTCAACAGTTCACACGTAA GTAGTCATTTATCTTAAGTGACTTTATTTTTATTTTAATATATGATCATC TCTTCAAATAGTTTTGACATACAAACGTCAACTGCAGGTGGATCCAGTGA CACTGGATCATCAAGTACTGTTACAGGGATCGTTATATCCATTGCGCTAA TTCTTTTGCTCATTACTCTTGTCACGATCCTCGTAATGACTTATATGTAC AAAAAGTGGTGTTTTGCTCCCAAAGATCCTCATTCCAAGCCAGGGTATGA TGGAGACGTTGAACAGCCTTTAAATGATTTGAATGATACTCAAATTGGAG GCTCTTCCATTATCAAACCTAGGTCATAG
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