EMLSAG00000006175, EMLSAG00000006175-688941 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000006175 vs. C. finmarchicus
Match: gi|592849564|gb|GAXK01107980.1| (TSA: Calanus finmarchicus comp1405868_c0_seq1 transcribed RNA sequence) HSP 1 Score: 28.8758 bits (63), Expect = 1.316e+0 Identity = 12/30 (40.00%), Postives = 18/30 (60.00%), Query Frame = 0 Query: 4 KVTYGTSSLKELFENSKHVILIYPNIIPDN 33 KVT ++ L +E S H + IYP+ +P N Sbjct: 520 KVTQESTELSPCWEESSHKVHIYPSWLPQN 609
BLAST of EMLSAG00000006175 vs. C. finmarchicus
Match: gi|592789394|gb|GAXK01165174.1| (TSA: Calanus finmarchicus comp789164_c0_seq1 transcribed RNA sequence) HSP 1 Score: 27.335 bits (59), Expect = 4.256e+0 Identity = 16/37 (43.24%), Postives = 20/37 (54.05%), Query Frame = 0 Query: 29 IIPDNSIQKKVSILGEEELLERYIFKAIRRREFCFFL 65 +IPDN+ + + LG EL RY R EF FFL Sbjct: 1179 LIPDNNFTSQTTQLG*VELKIRYF-----RLEFSFFL 1274
BLAST of EMLSAG00000006175 vs. C. finmarchicus
Match: gi|592936491|gb|GAXK01022062.1| (TSA: Calanus finmarchicus comp1359244_c0_seq1 transcribed RNA sequence) HSP 1 Score: 26.9498 bits (58), Expect = 5.915e+0 Identity = 11/24 (45.83%), Postives = 16/24 (66.67%), Query Frame = 0 Query: 18 NSKHVILIYPNIIPDNSIQKKVSI 41 N+ +LI PN+IPD + +KK I Sbjct: 718 NTNK*VLIAPNVIPDTNTRKKKPI 789
BLAST of EMLSAG00000006175 vs. C. finmarchicus
Match: gi|592858970|gb|GAXK01098592.1| (TSA: Calanus finmarchicus comp2261814_c0_seq1 transcribed RNA sequence) HSP 1 Score: 26.5646 bits (57), Expect = 5.997e+0 Identity = 15/49 (30.61%), Postives = 26/49 (53.06%), Query Frame = 0 Query: 5 VTYGTSSLKELFENSKHVILIYPNIIPDNSIQKKVSILGEEELLERYIF 53 V+Y +S E+ ++ KH+IL+Y ++ D Q E + L+R F Sbjct: 121 VSYNLNSFTEILDSLKHMILVYHQLV-DLHFQSLHIHFAEHKKLDRVFF 264
BLAST of EMLSAG00000006175 vs. L. salmonis peptides
Match: EMLSAP00000006175 (pep:novel supercontig:LSalAtl2s:LSalAtl2s336:664724:665210:-1 gene:EMLSAG00000006175 transcript:EMLSAT00000006175 description:"maker-LSalAtl2s336-augustus-gene-6.45") HSP 1 Score: 135.191 bits (339), Expect = 7.199e-43 Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0 Query: 1 MEFKVTYGTSSLKELFENSKHVILIYPNIIPDNSIQKKVSILGEEELLERYIFKAIRRREFCFFLKF 67 MEFKVTYGTSSLKELFENSKHVILIYPNIIPDNSIQKKVSILGEEELLERYIFKAIRRREFCFFLKF Sbjct: 1 MEFKVTYGTSSLKELFENSKHVILIYPNIIPDNSIQKKVSILGEEELLERYIFKAIRRREFCFFLKF 67 The following BLAST results are available for this feature:
BLAST of EMLSAG00000006175 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000006175 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 4
BLAST of EMLSAG00000006175 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000006175 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000006175 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000006175 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000006175 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s336:664724..665210- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000006175-688941 ID=EMLSAG00000006175-688941|Name=EMLSAG00000006175|organism=Lepeophtheirus salmonis|type=gene|length=487bp|location=Sequence derived from alignment at LSalAtl2s336:664724..665210- (Lepeophtheirus salmonis)back to top Add to Basket
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